Multiple sequence alignment - TraesCS2A01G518700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G518700 chr2A 100.000 2677 0 0 1407 4083 742153723 742156399 0.000000e+00 4944
1 TraesCS2A01G518700 chr2A 100.000 1019 0 0 1 1019 742152317 742153335 0.000000e+00 1882
2 TraesCS2A01G518700 chr2A 91.391 151 7 1 3477 3627 142700017 142699873 6.920000e-48 202
3 TraesCS2A01G518700 chr2A 88.158 152 12 1 3480 3631 582637620 582637475 4.190000e-40 176
4 TraesCS2A01G518700 chr2A 86.087 115 14 2 3926 4039 151266586 151266699 5.540000e-24 122
5 TraesCS2A01G518700 chr2B 92.854 2099 103 23 1408 3479 743744611 743746689 0.000000e+00 3001
6 TraesCS2A01G518700 chr2B 84.992 633 42 27 379 1008 743743610 743744192 9.770000e-166 593
7 TraesCS2A01G518700 chr2B 85.455 440 34 10 1498 1909 171019300 171019737 8.110000e-117 431
8 TraesCS2A01G518700 chr2B 93.478 138 9 0 1772 1909 248106997 248106860 5.350000e-49 206
9 TraesCS2A01G518700 chr2B 96.552 87 2 1 3950 4035 9622785 9622871 4.250000e-30 143
10 TraesCS2A01G518700 chr2D 92.649 1986 88 18 1408 3373 609487737 609489684 0.000000e+00 2806
11 TraesCS2A01G518700 chr2D 90.029 1043 52 22 1 1019 609486651 609487665 0.000000e+00 1303
12 TraesCS2A01G518700 chr3A 88.911 514 42 9 1408 1909 734395934 734396444 1.610000e-173 619
13 TraesCS2A01G518700 chr3A 87.938 514 46 10 1408 1909 403130462 403129953 3.510000e-165 592
14 TraesCS2A01G518700 chr3A 90.066 151 9 2 3477 3627 589833843 589833699 1.500000e-44 191
15 TraesCS2A01G518700 chr3B 86.200 529 41 14 1408 1909 356352409 356352932 9.980000e-151 544
16 TraesCS2A01G518700 chrUn 85.797 521 44 9 1417 1909 11895224 11895742 3.620000e-145 525
17 TraesCS2A01G518700 chr1B 89.884 346 29 3 1569 1909 82452597 82452253 1.350000e-119 440
18 TraesCS2A01G518700 chr1B 93.548 93 6 0 3942 4034 628049806 628049898 5.500000e-29 139
19 TraesCS2A01G518700 chr5B 85.682 440 33 10 1498 1909 590591648 590591211 1.740000e-118 436
20 TraesCS2A01G518700 chr4A 85.194 439 36 11 1498 1909 698953519 698953955 1.360000e-114 424
21 TraesCS2A01G518700 chr4A 86.577 149 10 5 869 1017 725487689 725487827 5.460000e-34 156
22 TraesCS2A01G518700 chr4A 94.872 78 4 0 1437 1514 725488248 725488325 5.540000e-24 122
23 TraesCS2A01G518700 chr5D 90.728 151 8 2 3477 3627 148233553 148233697 3.220000e-46 196
24 TraesCS2A01G518700 chr5A 90.728 151 8 1 3477 3627 640920029 640919885 3.220000e-46 196
25 TraesCS2A01G518700 chr5A 89.404 151 10 1 3477 3627 37144660 37144804 6.970000e-43 185
26 TraesCS2A01G518700 chr3D 87.283 173 14 3 3478 3649 546706812 546706647 1.500000e-44 191
27 TraesCS2A01G518700 chr3D 90.722 97 9 0 3938 4034 547927063 547927159 3.310000e-26 130
28 TraesCS2A01G518700 chr7A 88.742 151 11 1 3477 3627 461930428 461930572 3.240000e-41 180
29 TraesCS2A01G518700 chr7A 96.386 83 3 0 3953 4035 77709530 77709448 1.980000e-28 137
30 TraesCS2A01G518700 chr6A 88.742 151 11 2 3477 3627 603075453 603075309 3.240000e-41 180
31 TraesCS2A01G518700 chr6A 96.429 84 3 0 3953 4036 51882709 51882626 5.500000e-29 139
32 TraesCS2A01G518700 chr6B 95.506 89 4 0 3954 4042 135139555 135139467 4.250000e-30 143
33 TraesCS2A01G518700 chr6D 96.429 84 3 0 3953 4036 41237288 41237205 5.500000e-29 139
34 TraesCS2A01G518700 chr7D 92.632 95 7 0 3940 4034 615461371 615461465 1.980000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G518700 chr2A 742152317 742156399 4082 False 3413.0 4944 100.000 1 4083 2 chr2A.!!$F2 4082
1 TraesCS2A01G518700 chr2B 743743610 743746689 3079 False 1797.0 3001 88.923 379 3479 2 chr2B.!!$F3 3100
2 TraesCS2A01G518700 chr2D 609486651 609489684 3033 False 2054.5 2806 91.339 1 3373 2 chr2D.!!$F1 3372
3 TraesCS2A01G518700 chr3A 734395934 734396444 510 False 619.0 619 88.911 1408 1909 1 chr3A.!!$F1 501
4 TraesCS2A01G518700 chr3A 403129953 403130462 509 True 592.0 592 87.938 1408 1909 1 chr3A.!!$R1 501
5 TraesCS2A01G518700 chr3B 356352409 356352932 523 False 544.0 544 86.200 1408 1909 1 chr3B.!!$F1 501
6 TraesCS2A01G518700 chrUn 11895224 11895742 518 False 525.0 525 85.797 1417 1909 1 chrUn.!!$F1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
665 690 0.034896 GCTGAAAACTCCCTCCGTGA 59.965 55.0 0.0 0.0 0.00 4.35 F
738 764 0.325296 TAATCTCCCGGCCTGTCAGT 60.325 55.0 0.0 0.0 0.00 3.41 F
2548 2646 0.465705 TTTCATGGCTCCTCGCTAGG 59.534 55.0 0.0 0.0 45.21 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1879 1973 0.388134 GTGCAAGATGCCTGCAACAG 60.388 55.0 0.00 0.00 44.23 3.16 R
2588 2686 0.965866 CCTACGAGTCCAGAGTGGCA 60.966 60.0 0.00 0.00 37.47 4.92 R
3716 3815 0.031043 GGTTTGGTACACCGGTTTGC 59.969 55.0 2.97 0.88 39.29 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 2.887151 ACAACTGAGAAATGAGGGGG 57.113 50.000 0.00 0.00 0.00 5.40
73 74 4.151883 CTGAGAAATGAGGGGGAAAACAA 58.848 43.478 0.00 0.00 0.00 2.83
96 97 3.647978 GCTAGCATGCTCGGCTGC 61.648 66.667 26.57 17.19 42.62 5.25
101 102 2.588314 CATGCTCGGCTGCTCCTC 60.588 66.667 0.00 0.00 0.00 3.71
104 105 3.910490 GCTCGGCTGCTCCTCGAT 61.910 66.667 0.00 0.00 32.32 3.59
114 115 3.873952 GCTGCTCCTCGATGAAACTAAAT 59.126 43.478 0.00 0.00 0.00 1.40
116 117 4.112634 TGCTCCTCGATGAAACTAAATCG 58.887 43.478 0.00 0.00 45.46 3.34
135 136 6.954487 AATCGGGATAAAACCATCCTTTAC 57.046 37.500 2.38 0.00 43.56 2.01
164 165 5.595952 AGAATGAATCCTAAACTGCCCAATC 59.404 40.000 0.00 0.00 0.00 2.67
175 177 0.322098 TGCCCAATCAATCGGTTCGT 60.322 50.000 0.00 0.00 0.00 3.85
182 184 2.084101 CAATCGGTTCGTCGCGTCA 61.084 57.895 5.77 0.00 0.00 4.35
191 193 2.710971 CGTCGCGTCAGAGCAGTTG 61.711 63.158 5.77 0.00 36.85 3.16
196 198 1.726853 GCGTCAGAGCAGTTGGTAAT 58.273 50.000 0.00 0.00 37.05 1.89
199 201 2.860735 CGTCAGAGCAGTTGGTAATAGC 59.139 50.000 0.00 0.00 0.00 2.97
202 204 2.108168 AGAGCAGTTGGTAATAGCCGA 58.892 47.619 0.00 0.00 0.00 5.54
220 222 1.396301 CGAGAGCTTGAAATCAGTGCC 59.604 52.381 0.00 1.35 0.00 5.01
222 224 1.074405 AGAGCTTGAAATCAGTGCCCA 59.926 47.619 0.00 0.00 0.00 5.36
223 225 1.888512 GAGCTTGAAATCAGTGCCCAA 59.111 47.619 0.00 0.00 0.00 4.12
228 230 2.942804 TGAAATCAGTGCCCAAGTTCA 58.057 42.857 0.00 0.00 0.00 3.18
233 235 1.151450 AGTGCCCAAGTTCACTGGG 59.849 57.895 3.38 3.38 41.53 4.45
247 249 3.822192 TGGGACAGACGCGGATCG 61.822 66.667 12.47 0.00 45.38 3.69
249 251 2.488355 GGACAGACGCGGATCGAA 59.512 61.111 12.47 0.00 41.67 3.71
288 290 2.124570 CCACCGAGCATCCCCTTG 60.125 66.667 0.00 0.00 0.00 3.61
289 291 2.671070 CACCGAGCATCCCCTTGT 59.329 61.111 0.00 0.00 0.00 3.16
290 292 1.746615 CACCGAGCATCCCCTTGTG 60.747 63.158 0.00 0.00 0.00 3.33
291 293 2.825836 CCGAGCATCCCCTTGTGC 60.826 66.667 0.00 0.00 41.57 4.57
292 294 2.046023 CGAGCATCCCCTTGTGCA 60.046 61.111 0.00 0.00 43.63 4.57
293 295 2.110967 CGAGCATCCCCTTGTGCAG 61.111 63.158 0.00 0.00 43.63 4.41
294 296 1.751927 GAGCATCCCCTTGTGCAGG 60.752 63.158 0.00 0.00 43.63 4.85
365 376 8.786826 TTCCATCGACAAGTAGAAAAATACAT 57.213 30.769 0.00 0.00 0.00 2.29
367 378 9.309516 TCCATCGACAAGTAGAAAAATACATAC 57.690 33.333 0.00 0.00 0.00 2.39
411 422 3.914426 ACCGAGTTCTTGGCTGATTAT 57.086 42.857 6.04 0.00 0.00 1.28
484 495 0.652592 ATACGAACGTACCGAGACCG 59.347 55.000 15.68 0.00 33.01 4.79
485 496 0.669318 TACGAACGTACCGAGACCGT 60.669 55.000 15.68 0.00 36.17 4.83
489 500 4.824166 CGTACCGAGACCGTGCCG 62.824 72.222 0.00 0.00 0.00 5.69
560 584 3.083997 CCGGTGGGGAGGAGGAAG 61.084 72.222 0.00 0.00 38.47 3.46
561 585 3.787001 CGGTGGGGAGGAGGAAGC 61.787 72.222 0.00 0.00 0.00 3.86
562 586 3.787001 GGTGGGGAGGAGGAAGCG 61.787 72.222 0.00 0.00 0.00 4.68
563 587 3.787001 GTGGGGAGGAGGAAGCGG 61.787 72.222 0.00 0.00 0.00 5.52
564 588 4.005978 TGGGGAGGAGGAAGCGGA 62.006 66.667 0.00 0.00 0.00 5.54
606 631 3.917760 TTGGCGTTTTTGGGCGGG 61.918 61.111 0.00 0.00 0.00 6.13
661 686 2.041115 GCGGCTGAAAACTCCCTCC 61.041 63.158 0.00 0.00 0.00 4.30
662 687 1.741770 CGGCTGAAAACTCCCTCCG 60.742 63.158 0.00 0.00 0.00 4.63
663 688 1.375326 GGCTGAAAACTCCCTCCGT 59.625 57.895 0.00 0.00 0.00 4.69
664 689 0.955919 GGCTGAAAACTCCCTCCGTG 60.956 60.000 0.00 0.00 0.00 4.94
665 690 0.034896 GCTGAAAACTCCCTCCGTGA 59.965 55.000 0.00 0.00 0.00 4.35
666 691 1.797025 CTGAAAACTCCCTCCGTGAC 58.203 55.000 0.00 0.00 0.00 3.67
667 692 0.395312 TGAAAACTCCCTCCGTGACC 59.605 55.000 0.00 0.00 0.00 4.02
681 706 2.322830 TGACCGTGTCCGTCTCTCG 61.323 63.158 2.23 0.00 39.52 4.04
683 708 3.432588 CCGTGTCCGTCTCTCGCT 61.433 66.667 0.00 0.00 38.35 4.93
684 709 2.098680 CGTGTCCGTCTCTCGCTC 59.901 66.667 0.00 0.00 38.35 5.03
685 710 2.486042 GTGTCCGTCTCTCGCTCC 59.514 66.667 0.00 0.00 38.35 4.70
722 748 2.582436 CGCGGTCCCACCTGTAAT 59.418 61.111 0.00 0.00 35.66 1.89
738 764 0.325296 TAATCTCCCGGCCTGTCAGT 60.325 55.000 0.00 0.00 0.00 3.41
742 768 2.358737 CCCGGCCTGTCAGTTGTC 60.359 66.667 0.00 0.00 0.00 3.18
833 859 4.394712 CGGGGAGAGGCTTGCGTT 62.395 66.667 0.00 0.00 0.00 4.84
834 860 2.034221 GGGGAGAGGCTTGCGTTT 59.966 61.111 0.00 0.00 0.00 3.60
835 861 2.335712 GGGGAGAGGCTTGCGTTTG 61.336 63.158 0.00 0.00 0.00 2.93
836 862 2.563427 GGAGAGGCTTGCGTTTGC 59.437 61.111 0.00 0.00 43.20 3.68
966 992 4.992294 GAGCGGATCGAGAGCGCC 62.992 72.222 2.29 0.00 40.24 6.53
1426 1475 1.168714 ACGAATTCAGGCCTTCTTGC 58.831 50.000 0.00 0.00 0.00 4.01
1444 1493 1.903877 GCTTGTAGGAGCTGGAGCCA 61.904 60.000 0.00 0.00 43.38 4.75
1562 1626 7.133133 TCTTGTGTTCCCTCTTTTACTAGTT 57.867 36.000 0.00 0.00 0.00 2.24
1580 1667 7.878547 ACTAGTTTAGTAGTAGCCGAAATCT 57.121 36.000 0.00 0.00 37.23 2.40
1604 1691 9.462606 TCTACTCTTTGATACTGATGTACTGAA 57.537 33.333 0.00 0.00 0.00 3.02
1659 1748 1.951602 GTGGCCCCGTTATTTATGTCC 59.048 52.381 0.00 0.00 0.00 4.02
1661 1750 3.047115 TGGCCCCGTTATTTATGTCCTA 58.953 45.455 0.00 0.00 0.00 2.94
1680 1769 6.436218 TGTCCTAGTCTGATTAGTTGCAACTA 59.564 38.462 30.81 30.81 40.37 2.24
1851 1945 8.658499 TCTTTTTAGTGTGGTTCTCTTTACTC 57.342 34.615 0.00 0.00 0.00 2.59
1869 1963 9.967346 TCTTTACTCTGTTCCTAATGATTATCG 57.033 33.333 0.00 0.00 0.00 2.92
1931 2025 2.231478 TCATCGAACCCTCACTCTTGTC 59.769 50.000 0.00 0.00 0.00 3.18
1997 2095 6.276091 TGTGAGTATTACTGAATAGCTGCAG 58.724 40.000 10.11 10.11 38.10 4.41
2004 2102 6.531503 TTACTGAATAGCTGCAGTAACTCT 57.468 37.500 23.36 5.78 46.73 3.24
2074 2172 3.586174 AGATATATGCTGGTGTGCTCCAT 59.414 43.478 0.00 0.00 36.84 3.41
2081 2179 3.136260 TGCTGGTGTGCTCCATGATATTA 59.864 43.478 0.00 0.00 36.84 0.98
2111 2209 3.751175 TGCTCCAACTAAAAGAACCATCG 59.249 43.478 0.00 0.00 0.00 3.84
2119 2217 6.481954 ACTAAAAGAACCATCGTTGATGTC 57.518 37.500 6.10 0.00 38.28 3.06
2206 2304 2.665165 TCAACCAGTTCATTGCTTGGT 58.335 42.857 2.06 2.06 0.00 3.67
2208 2306 2.361757 CAACCAGTTCATTGCTTGGTCA 59.638 45.455 6.91 0.00 0.00 4.02
2352 2450 3.378512 TGAATATCAGGTGTGCCTCTCT 58.621 45.455 0.00 0.00 44.97 3.10
2514 2612 9.569167 GCAAATACTAAAGGTAGTTCCATTTTC 57.431 33.333 0.00 0.00 41.06 2.29
2528 2626 4.081406 TCCATTTTCATTGACAGGGTCTG 58.919 43.478 0.00 0.00 37.52 3.51
2548 2646 0.465705 TTTCATGGCTCCTCGCTAGG 59.534 55.000 0.00 0.00 45.21 3.02
2549 2647 1.402896 TTCATGGCTCCTCGCTAGGG 61.403 60.000 4.14 0.00 43.84 3.53
2580 2678 0.468226 GTTGAGGGTGTGTGTCTCCA 59.532 55.000 0.00 0.00 0.00 3.86
2588 2686 1.274728 GTGTGTGTCTCCATGCTCTCT 59.725 52.381 0.00 0.00 0.00 3.10
2596 2694 0.616964 TCCATGCTCTCTGCCACTCT 60.617 55.000 0.00 0.00 42.00 3.24
2691 2789 7.024768 TCAGTTACAACTTGTTGTTAACTTGC 58.975 34.615 21.76 3.92 37.08 4.01
2750 2848 0.802222 GCTCAAGACGTGATGCGCTA 60.802 55.000 9.73 0.00 46.11 4.26
2828 2926 5.574970 AAGACCATATTCCTCCAATCTCC 57.425 43.478 0.00 0.00 0.00 3.71
2915 3013 2.039879 ACCGGCAACCTTCTTTGATACT 59.960 45.455 0.00 0.00 0.00 2.12
3013 3111 3.434984 GTGTTCACAGCTCTTCTGATTCC 59.565 47.826 0.00 0.00 45.72 3.01
3175 3273 1.201429 GCCCCTTTCTCACCTCTCCA 61.201 60.000 0.00 0.00 0.00 3.86
3270 3369 1.342819 ACTGCCAGTGAACTGACTCTC 59.657 52.381 12.05 0.00 46.59 3.20
3374 3473 9.537192 CCATGTTATTATGCAGATGTGAAAAAT 57.463 29.630 0.00 0.00 0.00 1.82
3380 3479 7.990541 TTATGCAGATGTGAAAAATATGTGC 57.009 32.000 0.00 0.00 32.97 4.57
3382 3481 5.968254 TGCAGATGTGAAAAATATGTGCAT 58.032 33.333 4.46 0.00 36.76 3.96
3413 3512 3.829886 ATGTGCAGTGGTGTTTATTCG 57.170 42.857 0.00 0.00 0.00 3.34
3416 3515 1.876799 TGCAGTGGTGTTTATTCGGTG 59.123 47.619 0.00 0.00 0.00 4.94
3418 3517 2.350388 GCAGTGGTGTTTATTCGGTGTG 60.350 50.000 0.00 0.00 0.00 3.82
3441 3540 4.156739 GCTGACATAAGGAAGAAAACTGGG 59.843 45.833 0.00 0.00 0.00 4.45
3481 3580 8.450578 TGACTGATTATATTGCCACTTTTAGG 57.549 34.615 0.00 0.00 0.00 2.69
3487 3586 2.035155 GCCACTTTTAGGCCCCGT 59.965 61.111 0.00 0.00 46.50 5.28
3488 3587 1.605451 GCCACTTTTAGGCCCCGTT 60.605 57.895 0.00 0.00 46.50 4.44
3489 3588 1.592400 GCCACTTTTAGGCCCCGTTC 61.592 60.000 0.00 0.00 46.50 3.95
3490 3589 1.303091 CCACTTTTAGGCCCCGTTCG 61.303 60.000 0.00 0.00 0.00 3.95
3491 3590 1.002990 ACTTTTAGGCCCCGTTCGG 60.003 57.895 0.00 4.08 0.00 4.30
3516 3615 4.776322 CCATTGCCGGCTCCGTGA 62.776 66.667 29.70 1.94 37.81 4.35
3517 3616 2.745884 CATTGCCGGCTCCGTGAA 60.746 61.111 29.70 13.02 37.81 3.18
3518 3617 2.033448 ATTGCCGGCTCCGTGAAA 59.967 55.556 29.70 12.18 37.81 2.69
3519 3618 1.378514 ATTGCCGGCTCCGTGAAAT 60.379 52.632 29.70 14.15 37.81 2.17
3520 3619 1.376609 ATTGCCGGCTCCGTGAAATC 61.377 55.000 29.70 0.00 37.81 2.17
3521 3620 3.202706 GCCGGCTCCGTGAAATCC 61.203 66.667 22.15 0.00 37.81 3.01
3522 3621 2.267642 CCGGCTCCGTGAAATCCA 59.732 61.111 7.59 0.00 37.81 3.41
3523 3622 2.106683 CCGGCTCCGTGAAATCCAC 61.107 63.158 7.59 0.00 42.30 4.02
3532 3631 0.652592 GTGAAATCCACGGATCTGCG 59.347 55.000 0.00 0.00 35.86 5.18
3533 3632 0.461870 TGAAATCCACGGATCTGCGG 60.462 55.000 1.81 1.81 33.08 5.69
3534 3633 0.179084 GAAATCCACGGATCTGCGGA 60.179 55.000 13.66 13.66 33.08 5.54
3535 3634 0.179073 AAATCCACGGATCTGCGGAG 60.179 55.000 16.24 0.00 33.08 4.63
3536 3635 2.650813 AATCCACGGATCTGCGGAGC 62.651 60.000 16.24 0.98 44.72 4.70
3548 3647 2.485122 CGGAGCATCGTTTTGCCC 59.515 61.111 4.56 5.23 43.83 5.36
3549 3648 2.485122 GGAGCATCGTTTTGCCCG 59.515 61.111 4.56 0.00 43.83 6.13
3550 3649 2.202479 GAGCATCGTTTTGCCCGC 60.202 61.111 4.56 0.00 43.83 6.13
3551 3650 2.672996 AGCATCGTTTTGCCCGCT 60.673 55.556 4.56 0.00 43.83 5.52
3552 3651 2.202479 GCATCGTTTTGCCCGCTC 60.202 61.111 0.00 0.00 36.60 5.03
3553 3652 2.690778 GCATCGTTTTGCCCGCTCT 61.691 57.895 0.00 0.00 36.60 4.09
3554 3653 1.366111 GCATCGTTTTGCCCGCTCTA 61.366 55.000 0.00 0.00 36.60 2.43
3555 3654 1.083489 CATCGTTTTGCCCGCTCTAA 58.917 50.000 0.00 0.00 0.00 2.10
3556 3655 1.062587 CATCGTTTTGCCCGCTCTAAG 59.937 52.381 0.00 0.00 0.00 2.18
3557 3656 0.319083 TCGTTTTGCCCGCTCTAAGA 59.681 50.000 0.00 0.00 0.00 2.10
3558 3657 0.442699 CGTTTTGCCCGCTCTAAGAC 59.557 55.000 0.00 0.00 0.00 3.01
3559 3658 1.809684 GTTTTGCCCGCTCTAAGACT 58.190 50.000 0.00 0.00 0.00 3.24
3560 3659 2.152016 GTTTTGCCCGCTCTAAGACTT 58.848 47.619 0.00 0.00 0.00 3.01
3561 3660 2.552743 GTTTTGCCCGCTCTAAGACTTT 59.447 45.455 0.00 0.00 0.00 2.66
3562 3661 2.561478 TTGCCCGCTCTAAGACTTTT 57.439 45.000 0.00 0.00 0.00 2.27
3563 3662 2.094762 TGCCCGCTCTAAGACTTTTC 57.905 50.000 0.00 0.00 0.00 2.29
3564 3663 1.346395 TGCCCGCTCTAAGACTTTTCA 59.654 47.619 0.00 0.00 0.00 2.69
3565 3664 1.732809 GCCCGCTCTAAGACTTTTCAC 59.267 52.381 0.00 0.00 0.00 3.18
3566 3665 2.613223 GCCCGCTCTAAGACTTTTCACT 60.613 50.000 0.00 0.00 0.00 3.41
3567 3666 2.996621 CCCGCTCTAAGACTTTTCACTG 59.003 50.000 0.00 0.00 0.00 3.66
3568 3667 2.413453 CCGCTCTAAGACTTTTCACTGC 59.587 50.000 0.00 0.00 0.00 4.40
3569 3668 3.059884 CGCTCTAAGACTTTTCACTGCA 58.940 45.455 0.00 0.00 0.00 4.41
3570 3669 3.122613 CGCTCTAAGACTTTTCACTGCAG 59.877 47.826 13.48 13.48 0.00 4.41
3571 3670 3.120373 GCTCTAAGACTTTTCACTGCAGC 60.120 47.826 15.27 0.00 0.00 5.25
3572 3671 4.314121 CTCTAAGACTTTTCACTGCAGCT 58.686 43.478 15.27 0.00 0.00 4.24
3573 3672 4.310769 TCTAAGACTTTTCACTGCAGCTC 58.689 43.478 15.27 0.00 0.00 4.09
3574 3673 1.889545 AGACTTTTCACTGCAGCTCC 58.110 50.000 15.27 0.00 0.00 4.70
3575 3674 0.514691 GACTTTTCACTGCAGCTCCG 59.485 55.000 15.27 0.00 0.00 4.63
3576 3675 0.179045 ACTTTTCACTGCAGCTCCGT 60.179 50.000 15.27 0.65 0.00 4.69
3577 3676 0.514691 CTTTTCACTGCAGCTCCGTC 59.485 55.000 15.27 0.00 0.00 4.79
3578 3677 0.884704 TTTTCACTGCAGCTCCGTCC 60.885 55.000 15.27 0.00 0.00 4.79
3579 3678 3.573772 TTCACTGCAGCTCCGTCCG 62.574 63.158 15.27 0.00 0.00 4.79
3606 3705 3.842923 CGGAGCAGTGGAGCGGAT 61.843 66.667 0.00 0.00 40.15 4.18
3607 3706 2.202987 GGAGCAGTGGAGCGGATG 60.203 66.667 0.00 0.00 40.15 3.51
3608 3707 2.202987 GAGCAGTGGAGCGGATGG 60.203 66.667 0.00 0.00 40.15 3.51
3609 3708 2.685017 AGCAGTGGAGCGGATGGA 60.685 61.111 0.00 0.00 40.15 3.41
3610 3709 2.512515 GCAGTGGAGCGGATGGAC 60.513 66.667 0.00 0.00 0.00 4.02
3611 3710 2.981302 CAGTGGAGCGGATGGACA 59.019 61.111 0.00 0.00 0.00 4.02
3612 3711 1.448540 CAGTGGAGCGGATGGACAC 60.449 63.158 0.00 0.00 0.00 3.67
3613 3712 2.125106 GTGGAGCGGATGGACACC 60.125 66.667 0.00 0.00 0.00 4.16
3614 3713 2.606213 TGGAGCGGATGGACACCA 60.606 61.111 0.00 0.00 38.19 4.17
3615 3714 2.220586 TGGAGCGGATGGACACCAA 61.221 57.895 0.00 0.00 36.95 3.67
3616 3715 1.002624 GGAGCGGATGGACACCAAA 60.003 57.895 0.00 0.00 36.95 3.28
3617 3716 1.305930 GGAGCGGATGGACACCAAAC 61.306 60.000 0.00 0.00 36.95 2.93
3618 3717 1.635663 GAGCGGATGGACACCAAACG 61.636 60.000 11.18 11.18 36.95 3.60
3619 3718 2.686816 GCGGATGGACACCAAACGG 61.687 63.158 15.17 9.20 36.95 4.44
3620 3719 2.038269 CGGATGGACACCAAACGGG 61.038 63.158 0.00 0.00 44.81 5.28
3621 3720 1.677633 GGATGGACACCAAACGGGG 60.678 63.158 0.00 0.00 42.91 5.73
3622 3721 2.282887 ATGGACACCAAACGGGGC 60.283 61.111 0.00 0.00 42.91 5.80
3623 3722 3.879180 ATGGACACCAAACGGGGCC 62.879 63.158 0.00 0.00 42.91 5.80
3624 3723 4.280019 GGACACCAAACGGGGCCT 62.280 66.667 0.84 0.00 42.91 5.19
3625 3724 2.203437 GACACCAAACGGGGCCTT 60.203 61.111 0.84 0.00 42.91 4.35
3626 3725 1.073548 GACACCAAACGGGGCCTTA 59.926 57.895 0.84 0.00 42.91 2.69
3627 3726 0.958876 GACACCAAACGGGGCCTTAG 60.959 60.000 0.84 0.00 42.91 2.18
3628 3727 1.377229 CACCAAACGGGGCCTTAGA 59.623 57.895 0.84 0.00 42.91 2.10
3629 3728 0.034477 CACCAAACGGGGCCTTAGAT 60.034 55.000 0.84 0.00 42.91 1.98
3630 3729 0.702316 ACCAAACGGGGCCTTAGATT 59.298 50.000 0.84 0.00 42.91 2.40
3631 3730 1.102978 CCAAACGGGGCCTTAGATTG 58.897 55.000 0.84 6.84 0.00 2.67
3632 3731 1.102978 CAAACGGGGCCTTAGATTGG 58.897 55.000 0.84 0.00 0.00 3.16
3633 3732 0.996583 AAACGGGGCCTTAGATTGGA 59.003 50.000 0.84 0.00 0.00 3.53
3634 3733 0.255033 AACGGGGCCTTAGATTGGAC 59.745 55.000 0.84 0.00 0.00 4.02
3635 3734 0.912487 ACGGGGCCTTAGATTGGACA 60.912 55.000 0.84 0.00 33.26 4.02
3636 3735 0.254747 CGGGGCCTTAGATTGGACAA 59.745 55.000 0.84 0.00 33.26 3.18
3637 3736 1.340600 CGGGGCCTTAGATTGGACAAA 60.341 52.381 0.84 0.00 33.26 2.83
3638 3737 2.815158 GGGGCCTTAGATTGGACAAAA 58.185 47.619 0.84 0.00 33.26 2.44
3639 3738 2.496070 GGGGCCTTAGATTGGACAAAAC 59.504 50.000 0.84 0.00 33.26 2.43
3640 3739 3.161866 GGGCCTTAGATTGGACAAAACA 58.838 45.455 0.84 0.00 33.26 2.83
3641 3740 3.056821 GGGCCTTAGATTGGACAAAACAC 60.057 47.826 0.84 0.00 33.26 3.32
3642 3741 3.572255 GGCCTTAGATTGGACAAAACACA 59.428 43.478 0.00 0.00 31.53 3.72
3643 3742 4.038642 GGCCTTAGATTGGACAAAACACAA 59.961 41.667 0.00 0.00 31.53 3.33
3644 3743 5.279456 GGCCTTAGATTGGACAAAACACAAT 60.279 40.000 0.00 0.00 37.52 2.71
3645 3744 6.223120 GCCTTAGATTGGACAAAACACAATT 58.777 36.000 0.00 0.00 35.17 2.32
3646 3745 6.705825 GCCTTAGATTGGACAAAACACAATTT 59.294 34.615 0.00 0.00 35.17 1.82
3647 3746 7.226523 GCCTTAGATTGGACAAAACACAATTTT 59.773 33.333 0.00 0.00 35.17 1.82
3648 3747 8.764287 CCTTAGATTGGACAAAACACAATTTTC 58.236 33.333 0.00 0.00 35.17 2.29
3649 3748 6.826893 AGATTGGACAAAACACAATTTTCG 57.173 33.333 0.00 0.00 35.17 3.46
3650 3749 6.337356 AGATTGGACAAAACACAATTTTCGT 58.663 32.000 0.00 0.00 35.17 3.85
3651 3750 6.475402 AGATTGGACAAAACACAATTTTCGTC 59.525 34.615 0.00 0.00 35.17 4.20
3652 3751 5.317733 TGGACAAAACACAATTTTCGTCT 57.682 34.783 11.14 0.00 0.00 4.18
3653 3752 5.098893 TGGACAAAACACAATTTTCGTCTG 58.901 37.500 11.14 0.00 0.00 3.51
3654 3753 4.502645 GGACAAAACACAATTTTCGTCTGG 59.497 41.667 11.14 0.00 0.00 3.86
3655 3754 5.317733 ACAAAACACAATTTTCGTCTGGA 57.682 34.783 0.00 0.00 0.00 3.86
3656 3755 5.715070 ACAAAACACAATTTTCGTCTGGAA 58.285 33.333 0.00 0.00 0.00 3.53
3657 3756 6.159988 ACAAAACACAATTTTCGTCTGGAAA 58.840 32.000 0.00 0.00 42.75 3.13
3658 3757 6.816140 ACAAAACACAATTTTCGTCTGGAAAT 59.184 30.769 0.00 0.00 43.82 2.17
3659 3758 6.826893 AAACACAATTTTCGTCTGGAAATG 57.173 33.333 0.00 0.00 43.82 2.32
3660 3759 5.514274 ACACAATTTTCGTCTGGAAATGT 57.486 34.783 0.00 0.00 43.82 2.71
3661 3760 5.901552 ACACAATTTTCGTCTGGAAATGTT 58.098 33.333 0.00 0.00 43.82 2.71
3662 3761 5.748152 ACACAATTTTCGTCTGGAAATGTTG 59.252 36.000 10.58 10.58 43.82 3.33
3663 3762 5.748152 CACAATTTTCGTCTGGAAATGTTGT 59.252 36.000 11.41 11.41 45.12 3.32
3664 3763 6.255453 CACAATTTTCGTCTGGAAATGTTGTT 59.745 34.615 13.22 3.32 43.62 2.83
3665 3764 6.475402 ACAATTTTCGTCTGGAAATGTTGTTC 59.525 34.615 11.41 0.00 43.62 3.18
3666 3765 3.870723 TTCGTCTGGAAATGTTGTTCG 57.129 42.857 0.00 0.00 0.00 3.95
3667 3766 2.139917 TCGTCTGGAAATGTTGTTCGG 58.860 47.619 0.00 0.00 0.00 4.30
3668 3767 2.139917 CGTCTGGAAATGTTGTTCGGA 58.860 47.619 0.00 0.00 0.00 4.55
3669 3768 2.157668 CGTCTGGAAATGTTGTTCGGAG 59.842 50.000 0.00 0.00 0.00 4.63
3670 3769 3.399330 GTCTGGAAATGTTGTTCGGAGA 58.601 45.455 0.00 0.00 0.00 3.71
3671 3770 4.003648 GTCTGGAAATGTTGTTCGGAGAT 58.996 43.478 0.00 0.00 35.04 2.75
3672 3771 5.175859 GTCTGGAAATGTTGTTCGGAGATA 58.824 41.667 0.00 0.00 35.04 1.98
3673 3772 5.292101 GTCTGGAAATGTTGTTCGGAGATAG 59.708 44.000 0.00 0.00 35.04 2.08
3674 3773 4.513442 TGGAAATGTTGTTCGGAGATAGG 58.487 43.478 0.00 0.00 35.04 2.57
3675 3774 4.224147 TGGAAATGTTGTTCGGAGATAGGA 59.776 41.667 0.00 0.00 35.04 2.94
3676 3775 5.183228 GGAAATGTTGTTCGGAGATAGGAA 58.817 41.667 0.00 0.00 35.04 3.36
3677 3776 5.294552 GGAAATGTTGTTCGGAGATAGGAAG 59.705 44.000 0.00 0.00 35.04 3.46
3678 3777 5.677319 AATGTTGTTCGGAGATAGGAAGA 57.323 39.130 0.00 0.00 35.04 2.87
3679 3778 5.878406 ATGTTGTTCGGAGATAGGAAGAT 57.122 39.130 0.00 0.00 35.04 2.40
3680 3779 6.978674 ATGTTGTTCGGAGATAGGAAGATA 57.021 37.500 0.00 0.00 35.04 1.98
3681 3780 6.392625 TGTTGTTCGGAGATAGGAAGATAG 57.607 41.667 0.00 0.00 35.04 2.08
3682 3781 6.127101 TGTTGTTCGGAGATAGGAAGATAGA 58.873 40.000 0.00 0.00 35.04 1.98
3683 3782 6.263392 TGTTGTTCGGAGATAGGAAGATAGAG 59.737 42.308 0.00 0.00 35.04 2.43
3684 3783 6.189036 TGTTCGGAGATAGGAAGATAGAGA 57.811 41.667 0.00 0.00 35.04 3.10
3685 3784 6.234920 TGTTCGGAGATAGGAAGATAGAGAG 58.765 44.000 0.00 0.00 35.04 3.20
3686 3785 6.043358 TGTTCGGAGATAGGAAGATAGAGAGA 59.957 42.308 0.00 0.00 35.04 3.10
3687 3786 6.294361 TCGGAGATAGGAAGATAGAGAGAG 57.706 45.833 0.00 0.00 0.00 3.20
3688 3787 5.783360 TCGGAGATAGGAAGATAGAGAGAGT 59.217 44.000 0.00 0.00 0.00 3.24
3689 3788 5.874810 CGGAGATAGGAAGATAGAGAGAGTG 59.125 48.000 0.00 0.00 0.00 3.51
3690 3789 6.520061 CGGAGATAGGAAGATAGAGAGAGTGT 60.520 46.154 0.00 0.00 0.00 3.55
3691 3790 7.310175 CGGAGATAGGAAGATAGAGAGAGTGTA 60.310 44.444 0.00 0.00 0.00 2.90
3692 3791 8.548877 GGAGATAGGAAGATAGAGAGAGTGTAT 58.451 40.741 0.00 0.00 0.00 2.29
3693 3792 9.601217 GAGATAGGAAGATAGAGAGAGTGTATC 57.399 40.741 0.00 0.00 32.55 2.24
3694 3793 9.111519 AGATAGGAAGATAGAGAGAGTGTATCA 57.888 37.037 0.00 0.00 34.45 2.15
3695 3794 9.905713 GATAGGAAGATAGAGAGAGTGTATCAT 57.094 37.037 0.00 0.00 34.45 2.45
3696 3795 9.685276 ATAGGAAGATAGAGAGAGTGTATCATG 57.315 37.037 0.00 0.00 34.45 3.07
3697 3796 7.526041 AGGAAGATAGAGAGAGTGTATCATGT 58.474 38.462 0.00 0.00 34.45 3.21
3698 3797 7.448161 AGGAAGATAGAGAGAGTGTATCATGTG 59.552 40.741 0.00 0.00 34.45 3.21
3699 3798 6.573664 AGATAGAGAGAGTGTATCATGTGC 57.426 41.667 0.00 0.00 34.45 4.57
3700 3799 6.067350 AGATAGAGAGAGTGTATCATGTGCA 58.933 40.000 0.00 0.00 34.45 4.57
3701 3800 4.383850 AGAGAGAGTGTATCATGTGCAC 57.616 45.455 10.75 10.75 42.97 4.57
3702 3801 3.131933 AGAGAGAGTGTATCATGTGCACC 59.868 47.826 15.69 0.00 43.59 5.01
3703 3802 3.102972 AGAGAGTGTATCATGTGCACCT 58.897 45.455 15.69 0.23 43.59 4.00
3704 3803 3.131933 AGAGAGTGTATCATGTGCACCTC 59.868 47.826 15.69 10.66 43.59 3.85
3705 3804 2.159184 AGAGTGTATCATGTGCACCTCG 60.159 50.000 15.69 2.37 43.59 4.63
3706 3805 1.824852 AGTGTATCATGTGCACCTCGA 59.175 47.619 15.69 8.42 43.59 4.04
3707 3806 2.159184 AGTGTATCATGTGCACCTCGAG 60.159 50.000 15.69 5.13 43.59 4.04
3708 3807 1.824852 TGTATCATGTGCACCTCGAGT 59.175 47.619 15.69 0.00 0.00 4.18
3709 3808 2.233676 TGTATCATGTGCACCTCGAGTT 59.766 45.455 15.69 0.00 0.00 3.01
3710 3809 2.479566 ATCATGTGCACCTCGAGTTT 57.520 45.000 15.69 0.00 0.00 2.66
3711 3810 2.254546 TCATGTGCACCTCGAGTTTT 57.745 45.000 15.69 0.00 0.00 2.43
3712 3811 2.571212 TCATGTGCACCTCGAGTTTTT 58.429 42.857 15.69 0.00 0.00 1.94
3729 3828 3.423996 TTTTTCTGCAAACCGGTGTAC 57.576 42.857 8.52 0.00 0.00 2.90
3730 3829 1.310904 TTTCTGCAAACCGGTGTACC 58.689 50.000 8.52 0.00 0.00 3.34
3731 3830 0.180642 TTCTGCAAACCGGTGTACCA 59.819 50.000 8.52 1.97 35.14 3.25
3732 3831 0.180642 TCTGCAAACCGGTGTACCAA 59.819 50.000 8.52 0.00 35.14 3.67
3733 3832 1.025812 CTGCAAACCGGTGTACCAAA 58.974 50.000 8.52 0.00 35.14 3.28
3734 3833 0.739561 TGCAAACCGGTGTACCAAAC 59.260 50.000 8.52 0.00 35.14 2.93
3735 3834 0.031043 GCAAACCGGTGTACCAAACC 59.969 55.000 8.52 0.00 35.14 3.27
3736 3835 1.682740 CAAACCGGTGTACCAAACCT 58.317 50.000 8.52 0.00 35.39 3.50
3737 3836 2.848691 CAAACCGGTGTACCAAACCTA 58.151 47.619 8.52 0.00 35.39 3.08
3738 3837 2.549064 AACCGGTGTACCAAACCTAC 57.451 50.000 8.52 0.00 35.39 3.18
3739 3838 1.422531 ACCGGTGTACCAAACCTACA 58.577 50.000 6.12 0.00 35.39 2.74
3740 3839 1.767681 ACCGGTGTACCAAACCTACAA 59.232 47.619 6.12 0.00 35.39 2.41
3741 3840 2.372837 ACCGGTGTACCAAACCTACAAT 59.627 45.455 6.12 0.00 35.39 2.71
3742 3841 3.004862 CCGGTGTACCAAACCTACAATC 58.995 50.000 0.00 0.00 35.39 2.67
3743 3842 3.004862 CGGTGTACCAAACCTACAATCC 58.995 50.000 1.50 0.00 35.39 3.01
3744 3843 3.557475 CGGTGTACCAAACCTACAATCCA 60.557 47.826 1.50 0.00 35.39 3.41
3745 3844 4.595986 GGTGTACCAAACCTACAATCCAT 58.404 43.478 0.00 0.00 34.66 3.41
3746 3845 4.398044 GGTGTACCAAACCTACAATCCATG 59.602 45.833 0.00 0.00 34.66 3.66
3747 3846 5.007682 GTGTACCAAACCTACAATCCATGT 58.992 41.667 0.00 0.00 46.36 3.21
3748 3847 5.123344 GTGTACCAAACCTACAATCCATGTC 59.877 44.000 0.00 0.00 42.70 3.06
3749 3848 4.380843 ACCAAACCTACAATCCATGTCA 57.619 40.909 0.00 0.00 42.70 3.58
3750 3849 4.735369 ACCAAACCTACAATCCATGTCAA 58.265 39.130 0.00 0.00 42.70 3.18
3751 3850 5.144100 ACCAAACCTACAATCCATGTCAAA 58.856 37.500 0.00 0.00 42.70 2.69
3752 3851 5.600484 ACCAAACCTACAATCCATGTCAAAA 59.400 36.000 0.00 0.00 42.70 2.44
3753 3852 5.925969 CCAAACCTACAATCCATGTCAAAAC 59.074 40.000 0.00 0.00 42.70 2.43
3754 3853 6.239289 CCAAACCTACAATCCATGTCAAAACT 60.239 38.462 0.00 0.00 42.70 2.66
3755 3854 6.976934 AACCTACAATCCATGTCAAAACTT 57.023 33.333 0.00 0.00 42.70 2.66
3756 3855 6.976934 ACCTACAATCCATGTCAAAACTTT 57.023 33.333 0.00 0.00 42.70 2.66
3757 3856 6.981722 ACCTACAATCCATGTCAAAACTTTC 58.018 36.000 0.00 0.00 42.70 2.62
3758 3857 6.015434 ACCTACAATCCATGTCAAAACTTTCC 60.015 38.462 0.00 0.00 42.70 3.13
3759 3858 5.213891 ACAATCCATGTCAAAACTTTCCC 57.786 39.130 0.00 0.00 37.96 3.97
3760 3859 4.653341 ACAATCCATGTCAAAACTTTCCCA 59.347 37.500 0.00 0.00 37.96 4.37
3761 3860 5.130145 ACAATCCATGTCAAAACTTTCCCAA 59.870 36.000 0.00 0.00 37.96 4.12
3762 3861 4.935352 TCCATGTCAAAACTTTCCCAAG 57.065 40.909 0.00 0.00 35.92 3.61
3763 3862 3.640967 TCCATGTCAAAACTTTCCCAAGG 59.359 43.478 0.00 0.00 33.82 3.61
3764 3863 3.640967 CCATGTCAAAACTTTCCCAAGGA 59.359 43.478 0.00 0.00 33.82 3.36
3765 3864 4.100808 CCATGTCAAAACTTTCCCAAGGAA 59.899 41.667 0.00 0.00 40.27 3.36
3783 3882 9.813826 CCCAAGGAAATATGAAGATAATTAGGT 57.186 33.333 0.00 0.00 0.00 3.08
3796 3895 9.771915 GAAGATAATTAGGTACATAGACGTAGC 57.228 37.037 0.00 0.00 39.60 3.58
3797 3896 8.859236 AGATAATTAGGTACATAGACGTAGCA 57.141 34.615 0.00 0.00 41.32 3.49
3798 3897 9.463902 AGATAATTAGGTACATAGACGTAGCAT 57.536 33.333 0.00 0.00 41.32 3.79
3806 3905 9.902684 AGGTACATAGACGTAGCATATATACTT 57.097 33.333 0.00 0.00 41.32 2.24
3915 4014 8.582433 AATTTTGAAAATGTAGTGTTAACGGG 57.418 30.769 3.62 0.00 0.00 5.28
3916 4015 6.696441 TTTGAAAATGTAGTGTTAACGGGT 57.304 33.333 0.26 0.00 0.00 5.28
3917 4016 5.927954 TGAAAATGTAGTGTTAACGGGTC 57.072 39.130 0.26 0.00 0.00 4.46
3918 4017 4.448395 TGAAAATGTAGTGTTAACGGGTCG 59.552 41.667 0.26 0.00 0.00 4.79
3919 4018 3.940209 AATGTAGTGTTAACGGGTCGA 57.060 42.857 0.26 0.00 0.00 4.20
3920 4019 4.460948 AATGTAGTGTTAACGGGTCGAT 57.539 40.909 0.26 0.00 0.00 3.59
3921 4020 3.940209 TGTAGTGTTAACGGGTCGATT 57.060 42.857 0.26 0.00 0.00 3.34
3922 4021 3.836949 TGTAGTGTTAACGGGTCGATTC 58.163 45.455 0.26 0.00 0.00 2.52
3923 4022 3.255395 TGTAGTGTTAACGGGTCGATTCA 59.745 43.478 0.26 0.00 0.00 2.57
3924 4023 3.604875 AGTGTTAACGGGTCGATTCAT 57.395 42.857 0.26 0.00 0.00 2.57
3925 4024 4.724074 AGTGTTAACGGGTCGATTCATA 57.276 40.909 0.26 0.00 0.00 2.15
3926 4025 4.679662 AGTGTTAACGGGTCGATTCATAG 58.320 43.478 0.26 0.00 0.00 2.23
3927 4026 3.244579 GTGTTAACGGGTCGATTCATAGC 59.755 47.826 0.26 0.00 0.00 2.97
3928 4027 2.798847 GTTAACGGGTCGATTCATAGCC 59.201 50.000 0.00 0.00 0.00 3.93
3929 4028 1.120530 AACGGGTCGATTCATAGCCT 58.879 50.000 0.00 0.00 0.00 4.58
3930 4029 1.991121 ACGGGTCGATTCATAGCCTA 58.009 50.000 0.00 0.00 0.00 3.93
3931 4030 1.612463 ACGGGTCGATTCATAGCCTAC 59.388 52.381 0.00 0.00 0.00 3.18
3932 4031 1.887198 CGGGTCGATTCATAGCCTACT 59.113 52.381 0.00 0.00 0.00 2.57
3933 4032 2.296471 CGGGTCGATTCATAGCCTACTT 59.704 50.000 0.00 0.00 0.00 2.24
3934 4033 3.654414 GGGTCGATTCATAGCCTACTTG 58.346 50.000 0.00 0.00 0.00 3.16
3935 4034 3.321111 GGGTCGATTCATAGCCTACTTGA 59.679 47.826 0.00 0.00 0.00 3.02
3936 4035 4.202223 GGGTCGATTCATAGCCTACTTGAA 60.202 45.833 0.00 0.00 34.18 2.69
3937 4036 5.357257 GGTCGATTCATAGCCTACTTGAAA 58.643 41.667 0.00 0.00 33.45 2.69
3938 4037 5.992217 GGTCGATTCATAGCCTACTTGAAAT 59.008 40.000 0.00 0.00 33.45 2.17
3939 4038 6.483640 GGTCGATTCATAGCCTACTTGAAATT 59.516 38.462 0.00 0.00 33.45 1.82
3940 4039 7.348201 GTCGATTCATAGCCTACTTGAAATTG 58.652 38.462 0.00 0.00 33.45 2.32
3941 4040 7.224753 GTCGATTCATAGCCTACTTGAAATTGA 59.775 37.037 0.00 0.00 33.45 2.57
3942 4041 7.933577 TCGATTCATAGCCTACTTGAAATTGAT 59.066 33.333 0.00 0.00 33.45 2.57
3943 4042 9.208022 CGATTCATAGCCTACTTGAAATTGATA 57.792 33.333 0.00 0.00 33.45 2.15
3946 4045 9.679661 TTCATAGCCTACTTGAAATTGATAACA 57.320 29.630 0.00 0.00 0.00 2.41
3947 4046 9.679661 TCATAGCCTACTTGAAATTGATAACAA 57.320 29.630 0.00 0.00 40.42 2.83
3948 4047 9.941664 CATAGCCTACTTGAAATTGATAACAAG 57.058 33.333 0.00 0.00 43.30 3.16
3951 4050 9.686683 AGCCTACTTGAAATTGATAACAAGTAT 57.313 29.630 15.49 3.14 46.91 2.12
3956 4055 9.533831 ACTTGAAATTGATAACAAGTATTCCCT 57.466 29.630 0.00 0.00 46.84 4.20
3958 4057 9.753674 TTGAAATTGATAACAAGTATTCCCTCT 57.246 29.630 0.00 0.00 39.46 3.69
3959 4058 9.177608 TGAAATTGATAACAAGTATTCCCTCTG 57.822 33.333 0.00 0.00 39.46 3.35
3960 4059 9.178758 GAAATTGATAACAAGTATTCCCTCTGT 57.821 33.333 0.00 0.00 39.46 3.41
3964 4063 9.444600 TTGATAACAAGTATTCCCTCTGTAAAC 57.555 33.333 0.00 0.00 0.00 2.01
3965 4064 8.598916 TGATAACAAGTATTCCCTCTGTAAACA 58.401 33.333 0.00 0.00 0.00 2.83
3966 4065 9.444600 GATAACAAGTATTCCCTCTGTAAACAA 57.555 33.333 0.00 0.00 0.00 2.83
3967 4066 9.802039 ATAACAAGTATTCCCTCTGTAAACAAA 57.198 29.630 0.00 0.00 0.00 2.83
3968 4067 8.706322 AACAAGTATTCCCTCTGTAAACAAAT 57.294 30.769 0.00 0.00 0.00 2.32
3969 4068 9.802039 AACAAGTATTCCCTCTGTAAACAAATA 57.198 29.630 0.00 0.00 0.00 1.40
3970 4069 9.975218 ACAAGTATTCCCTCTGTAAACAAATAT 57.025 29.630 0.00 0.00 0.00 1.28
3977 4076 7.981142 TCCCTCTGTAAACAAATATAAAAGCG 58.019 34.615 0.00 0.00 0.00 4.68
3978 4077 7.608761 TCCCTCTGTAAACAAATATAAAAGCGT 59.391 33.333 0.00 0.00 0.00 5.07
3979 4078 8.241367 CCCTCTGTAAACAAATATAAAAGCGTT 58.759 33.333 0.00 0.00 0.00 4.84
3980 4079 9.620660 CCTCTGTAAACAAATATAAAAGCGTTT 57.379 29.630 2.53 2.53 0.00 3.60
3996 4095 8.828688 AAAAGCGTTTAGATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
3997 4096 9.918630 AAAAGCGTTTAGATCACTACTTTAGTA 57.081 29.630 0.00 0.00 37.23 1.82
3998 4097 9.918630 AAAGCGTTTAGATCACTACTTTAGTAA 57.081 29.630 0.00 0.00 37.23 2.24
4000 4099 9.733219 AGCGTTTAGATCACTACTTTAGTAATC 57.267 33.333 0.00 0.00 37.23 1.75
4001 4100 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
4029 4128 9.853177 AACACTCTTATATTTCTTTATGGAGGG 57.147 33.333 0.00 0.00 0.00 4.30
4030 4129 9.225682 ACACTCTTATATTTCTTTATGGAGGGA 57.774 33.333 0.00 0.00 0.00 4.20
4031 4130 9.717942 CACTCTTATATTTCTTTATGGAGGGAG 57.282 37.037 0.00 0.00 0.00 4.30
4032 4131 9.453830 ACTCTTATATTTCTTTATGGAGGGAGT 57.546 33.333 0.00 0.00 0.00 3.85
4069 4168 9.798994 AATAGAATGATTTGTCATTTCTGCTTC 57.201 29.630 5.26 0.00 40.08 3.86
4070 4169 7.463961 AGAATGATTTGTCATTTCTGCTTCT 57.536 32.000 5.26 0.00 40.08 2.85
4071 4170 7.536855 AGAATGATTTGTCATTTCTGCTTCTC 58.463 34.615 5.26 0.00 40.08 2.87
4072 4171 5.287170 TGATTTGTCATTTCTGCTTCTCG 57.713 39.130 0.00 0.00 0.00 4.04
4073 4172 4.996758 TGATTTGTCATTTCTGCTTCTCGA 59.003 37.500 0.00 0.00 0.00 4.04
4074 4173 5.645067 TGATTTGTCATTTCTGCTTCTCGAT 59.355 36.000 0.00 0.00 0.00 3.59
4075 4174 4.934075 TTGTCATTTCTGCTTCTCGATG 57.066 40.909 0.00 0.00 0.00 3.84
4076 4175 3.930336 TGTCATTTCTGCTTCTCGATGT 58.070 40.909 0.00 0.00 0.00 3.06
4077 4176 3.928992 TGTCATTTCTGCTTCTCGATGTC 59.071 43.478 0.00 0.00 0.00 3.06
4078 4177 3.000277 GTCATTTCTGCTTCTCGATGTCG 60.000 47.826 0.00 0.00 41.45 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.958043 GCCTCAATTATTTTAACATCAACGATC 58.042 33.333 0.00 0.00 0.00 3.69
18 19 9.638239 GAGTTGCCTCAATTATTTTAACATCAA 57.362 29.630 0.00 0.00 37.67 2.57
66 67 4.155644 AGCATGCTAGCTCTCTTTGTTTTC 59.844 41.667 21.21 0.00 42.18 2.29
96 97 4.051922 CCCGATTTAGTTTCATCGAGGAG 58.948 47.826 0.00 0.00 44.18 3.69
101 102 7.130269 GGTTTTATCCCGATTTAGTTTCATCG 58.870 38.462 0.00 0.00 41.65 3.84
104 105 7.067737 GGATGGTTTTATCCCGATTTAGTTTCA 59.932 37.037 0.00 0.00 40.64 2.69
114 115 4.444536 CGTAAAGGATGGTTTTATCCCGA 58.555 43.478 0.00 0.00 46.38 5.14
116 117 3.317149 GGCGTAAAGGATGGTTTTATCCC 59.683 47.826 0.00 0.00 46.38 3.85
135 136 3.246226 CAGTTTAGGATTCATTCTCGGCG 59.754 47.826 0.00 0.00 0.00 6.46
164 165 1.998550 CTGACGCGACGAACCGATTG 61.999 60.000 15.93 0.00 0.00 2.67
175 177 1.520600 TACCAACTGCTCTGACGCGA 61.521 55.000 15.93 0.00 0.00 5.87
182 184 2.101582 CTCGGCTATTACCAACTGCTCT 59.898 50.000 0.00 0.00 0.00 4.09
199 201 1.396301 GCACTGATTTCAAGCTCTCGG 59.604 52.381 0.00 0.00 0.00 4.63
202 204 1.074405 TGGGCACTGATTTCAAGCTCT 59.926 47.619 0.00 0.00 31.22 4.09
207 209 3.068024 GTGAACTTGGGCACTGATTTCAA 59.932 43.478 0.00 0.00 32.44 2.69
220 222 1.873903 CGTCTGTCCCAGTGAACTTGG 60.874 57.143 0.00 0.00 32.61 3.61
222 224 0.249911 GCGTCTGTCCCAGTGAACTT 60.250 55.000 0.00 0.00 32.61 2.66
223 225 1.367840 GCGTCTGTCCCAGTGAACT 59.632 57.895 0.00 0.00 32.61 3.01
228 230 2.680352 ATCCGCGTCTGTCCCAGT 60.680 61.111 4.92 0.00 32.61 4.00
233 235 0.525668 ATGTTCGATCCGCGTCTGTC 60.526 55.000 4.92 0.00 41.80 3.51
247 249 2.613977 CCTCCCTGTGTCAGTGATGTTC 60.614 54.545 0.00 0.00 0.00 3.18
249 251 0.979665 CCTCCCTGTGTCAGTGATGT 59.020 55.000 0.00 0.00 0.00 3.06
286 288 2.151502 TTCTTGTTTCCCCTGCACAA 57.848 45.000 0.00 0.00 0.00 3.33
288 290 2.229784 CAGATTCTTGTTTCCCCTGCAC 59.770 50.000 0.00 0.00 0.00 4.57
289 291 2.517959 CAGATTCTTGTTTCCCCTGCA 58.482 47.619 0.00 0.00 0.00 4.41
290 292 1.821136 CCAGATTCTTGTTTCCCCTGC 59.179 52.381 0.00 0.00 0.00 4.85
291 293 1.821136 GCCAGATTCTTGTTTCCCCTG 59.179 52.381 0.00 0.00 0.00 4.45
292 294 1.272704 GGCCAGATTCTTGTTTCCCCT 60.273 52.381 0.00 0.00 0.00 4.79
293 295 1.186200 GGCCAGATTCTTGTTTCCCC 58.814 55.000 0.00 0.00 0.00 4.81
294 296 0.811281 CGGCCAGATTCTTGTTTCCC 59.189 55.000 2.24 0.00 0.00 3.97
295 297 0.171231 GCGGCCAGATTCTTGTTTCC 59.829 55.000 2.24 0.00 0.00 3.13
296 298 0.881118 TGCGGCCAGATTCTTGTTTC 59.119 50.000 2.24 0.00 0.00 2.78
298 300 1.589716 GCTGCGGCCAGATTCTTGTT 61.590 55.000 6.12 0.00 41.77 2.83
300 302 1.381928 ATGCTGCGGCCAGATTCTTG 61.382 55.000 16.57 0.00 41.77 3.02
337 348 3.953712 TTCTACTTGTCGATGGAAGCA 57.046 42.857 0.00 0.00 0.00 3.91
350 361 6.602009 GCCTGGGTGTATGTATTTTTCTACTT 59.398 38.462 0.00 0.00 0.00 2.24
365 376 2.665089 CCGGATGTGCCTGGGTGTA 61.665 63.158 0.00 0.00 0.00 2.90
411 422 1.153568 CTCCTCGCAAATCTCGGCA 60.154 57.895 0.00 0.00 0.00 5.69
546 570 3.787001 CCGCTTCCTCCTCCCCAC 61.787 72.222 0.00 0.00 0.00 4.61
547 571 3.984186 CTCCGCTTCCTCCTCCCCA 62.984 68.421 0.00 0.00 0.00 4.96
550 574 2.042843 TCCTCCGCTTCCTCCTCC 60.043 66.667 0.00 0.00 0.00 4.30
656 681 4.065281 GGACACGGTCACGGAGGG 62.065 72.222 6.41 0.00 46.48 4.30
661 686 2.126965 GAGACGGACACGGTCACG 60.127 66.667 10.90 8.91 46.48 4.35
662 687 1.209640 GAGAGACGGACACGGTCAC 59.790 63.158 10.90 5.76 46.48 3.67
663 688 2.322830 CGAGAGACGGACACGGTCA 61.323 63.158 10.90 0.00 46.48 4.02
664 689 2.479650 CGAGAGACGGACACGGTC 59.520 66.667 0.00 0.00 46.48 4.79
665 690 3.735029 GCGAGAGACGGACACGGT 61.735 66.667 0.00 0.00 46.48 4.83
666 691 3.384014 GAGCGAGAGACGGACACGG 62.384 68.421 0.00 0.00 46.48 4.94
681 706 4.083862 GGGGTGACGTCAGGGAGC 62.084 72.222 20.73 6.52 0.00 4.70
683 708 4.289101 TCGGGGTGACGTCAGGGA 62.289 66.667 20.73 10.87 34.94 4.20
684 709 3.760035 CTCGGGGTGACGTCAGGG 61.760 72.222 20.73 2.76 34.94 4.45
685 710 4.436998 GCTCGGGGTGACGTCAGG 62.437 72.222 20.73 8.94 34.94 3.86
710 735 0.689745 CCGGGAGATTACAGGTGGGA 60.690 60.000 0.00 0.00 0.00 4.37
722 748 2.203788 AACTGACAGGCCGGGAGA 60.204 61.111 8.08 0.00 0.00 3.71
818 844 2.982744 GCAAACGCAAGCCTCTCCC 61.983 63.158 0.00 0.00 45.62 4.30
832 858 2.327592 CTCAGCACGCAACGCAAA 59.672 55.556 0.00 0.00 0.00 3.68
833 859 3.648982 CCTCAGCACGCAACGCAA 61.649 61.111 0.00 0.00 0.00 4.85
834 860 4.600576 TCCTCAGCACGCAACGCA 62.601 61.111 0.00 0.00 0.00 5.24
835 861 3.782244 CTCCTCAGCACGCAACGC 61.782 66.667 0.00 0.00 0.00 4.84
836 862 3.782244 GCTCCTCAGCACGCAACG 61.782 66.667 0.00 0.00 46.06 4.10
1406 1436 1.541588 GCAAGAAGGCCTGAATTCGTT 59.458 47.619 5.69 0.00 0.00 3.85
1426 1475 0.107945 GTGGCTCCAGCTCCTACAAG 60.108 60.000 0.00 0.00 41.70 3.16
1444 1493 1.620819 AGCACGTCTTTGATCTCCAGT 59.379 47.619 0.00 0.00 0.00 4.00
1562 1626 8.404000 CAAAGAGTAGATTTCGGCTACTACTAA 58.596 37.037 0.00 0.00 46.25 2.24
1630 1719 0.677842 AACGGGGCCACGATATACTC 59.322 55.000 38.56 0.00 37.61 2.59
1659 1748 7.316640 ACAGTAGTTGCAACTAATCAGACTAG 58.683 38.462 34.72 23.08 42.66 2.57
1661 1750 6.102897 ACAGTAGTTGCAACTAATCAGACT 57.897 37.500 34.72 26.89 42.66 3.24
1680 1769 0.532573 CTCCGGCACATCAGTACAGT 59.467 55.000 0.00 0.00 0.00 3.55
1752 1842 5.273523 GGAATGCAATTGCTTCAGTTTTC 57.726 39.130 29.37 16.12 41.91 2.29
1851 1945 9.476202 TTCATACACGATAATCATTAGGAACAG 57.524 33.333 0.00 0.00 0.00 3.16
1869 1963 2.749076 TGCCTGCAACAGATTCATACAC 59.251 45.455 0.00 0.00 32.44 2.90
1879 1973 0.388134 GTGCAAGATGCCTGCAACAG 60.388 55.000 0.00 0.00 44.23 3.16
1898 1992 7.169982 GTGAGGGTTCGATGAAAGAATATAGTG 59.830 40.741 0.00 0.00 0.00 2.74
1931 2025 2.046285 GTCAACATCCTTGGGCCGG 61.046 63.158 0.00 0.00 0.00 6.13
1997 2095 9.482627 CAAATACATGGAGGAGATAAGAGTTAC 57.517 37.037 0.00 0.00 0.00 2.50
2004 2102 6.575244 ACACCAAATACATGGAGGAGATAA 57.425 37.500 0.00 0.00 43.54 1.75
2074 2172 6.662755 AGTTGGAGCAGGTCAAATAATATCA 58.337 36.000 1.20 0.00 0.00 2.15
2081 2179 5.385198 TCTTTTAGTTGGAGCAGGTCAAAT 58.615 37.500 1.20 0.00 0.00 2.32
2111 2209 5.005586 CCACACAAACACAAATGACATCAAC 59.994 40.000 0.00 0.00 0.00 3.18
2119 2217 3.119173 ACCTGACCACACAAACACAAATG 60.119 43.478 0.00 0.00 0.00 2.32
2206 2304 3.684908 TCCGATTTGGATGCTTTTCTGA 58.315 40.909 0.00 0.00 43.74 3.27
2305 2403 8.569641 AGCTACCATGTGTTAAAACGAAAATAA 58.430 29.630 0.00 0.00 0.00 1.40
2306 2404 8.018520 CAGCTACCATGTGTTAAAACGAAAATA 58.981 33.333 0.00 0.00 0.00 1.40
2484 2582 4.831674 ACTACCTTTAGTATTTGCCGGT 57.168 40.909 1.90 0.00 36.73 5.28
2514 2612 3.192001 CCATGAAACAGACCCTGTCAATG 59.808 47.826 0.00 5.25 44.62 2.82
2548 2646 1.340114 CCCTCAACCTAGGTTTGAGCC 60.340 57.143 29.80 0.00 36.00 4.70
2549 2647 1.351350 ACCCTCAACCTAGGTTTGAGC 59.649 52.381 29.80 0.00 36.00 4.26
2563 2661 4.718143 TGGAGACACACACCCTCA 57.282 55.556 0.00 0.00 33.40 3.86
2588 2686 0.965866 CCTACGAGTCCAGAGTGGCA 60.966 60.000 0.00 0.00 37.47 4.92
2596 2694 4.222145 AGCAAAACTATTCCTACGAGTCCA 59.778 41.667 0.00 0.00 0.00 4.02
2673 2771 5.270083 TCATCGCAAGTTAACAACAAGTTG 58.730 37.500 8.61 11.16 40.37 3.16
2678 2776 6.541969 CACATATCATCGCAAGTTAACAACA 58.458 36.000 8.61 0.00 39.48 3.33
2681 2779 4.035091 GGCACATATCATCGCAAGTTAACA 59.965 41.667 8.61 0.00 39.48 2.41
2691 2789 1.620323 TCCTGAGGGCACATATCATCG 59.380 52.381 0.00 0.00 0.00 3.84
2750 2848 3.080319 GACTTCTTGGATCAGCAAGCTT 58.920 45.455 0.00 0.00 0.00 3.74
2915 3013 4.672587 ACAAACTTGCAGAGACTACTCA 57.327 40.909 0.00 0.00 44.79 3.41
3013 3111 2.169146 GGCGTTCCACCCGAATACG 61.169 63.158 0.00 0.00 39.43 3.06
3141 3239 0.035820 GGGGCAACGTCTTATCACCA 60.036 55.000 0.00 0.00 37.60 4.17
3142 3240 0.252197 AGGGGCAACGTCTTATCACC 59.748 55.000 0.00 0.00 37.60 4.02
3175 3273 6.020121 CGACGTCTTATAACCAAACGATCAAT 60.020 38.462 14.70 0.00 37.13 2.57
3270 3369 6.209391 GGGAATTACATGATTGGATGGGTAAG 59.791 42.308 0.00 0.00 0.00 2.34
3374 3473 4.514816 CACATAACATCCGGAATGCACATA 59.485 41.667 9.01 0.00 39.12 2.29
3380 3479 2.945008 ACTGCACATAACATCCGGAATG 59.055 45.455 9.01 10.59 41.48 2.67
3382 3481 2.355197 CACTGCACATAACATCCGGAA 58.645 47.619 9.01 0.00 0.00 4.30
3413 3512 3.334583 TCTTCCTTATGTCAGCACACC 57.665 47.619 0.00 0.00 34.48 4.16
3416 3515 5.335191 CCAGTTTTCTTCCTTATGTCAGCAC 60.335 44.000 0.00 0.00 0.00 4.40
3418 3517 4.156739 CCCAGTTTTCTTCCTTATGTCAGC 59.843 45.833 0.00 0.00 0.00 4.26
3441 3540 3.740115 TCAGTCAAAACAGCTTCCTACC 58.260 45.455 0.00 0.00 0.00 3.18
3499 3598 4.776322 TCACGGAGCCGGCAATGG 62.776 66.667 31.54 17.00 44.69 3.16
3500 3599 1.656818 ATTTCACGGAGCCGGCAATG 61.657 55.000 31.54 20.09 44.69 2.82
3501 3600 1.376609 GATTTCACGGAGCCGGCAAT 61.377 55.000 31.54 17.61 44.69 3.56
3502 3601 2.033448 ATTTCACGGAGCCGGCAA 59.967 55.556 31.54 12.90 44.69 4.52
3503 3602 2.435938 GATTTCACGGAGCCGGCA 60.436 61.111 31.54 4.96 44.69 5.69
3504 3603 3.202706 GGATTTCACGGAGCCGGC 61.203 66.667 21.89 21.89 44.69 6.13
3505 3604 2.106683 GTGGATTTCACGGAGCCGG 61.107 63.158 14.07 0.00 44.69 6.13
3506 3605 3.486263 GTGGATTTCACGGAGCCG 58.514 61.111 7.48 7.48 46.03 5.52
3513 3612 0.652592 CGCAGATCCGTGGATTTCAC 59.347 55.000 2.32 0.00 42.74 3.18
3514 3613 0.461870 CCGCAGATCCGTGGATTTCA 60.462 55.000 2.03 0.00 38.98 2.69
3515 3614 0.179084 TCCGCAGATCCGTGGATTTC 60.179 55.000 7.15 0.00 40.65 2.17
3516 3615 0.179073 CTCCGCAGATCCGTGGATTT 60.179 55.000 11.63 0.00 44.40 2.17
3517 3616 1.443407 CTCCGCAGATCCGTGGATT 59.557 57.895 11.63 0.00 44.40 3.01
3518 3617 3.133014 CTCCGCAGATCCGTGGAT 58.867 61.111 11.63 0.00 44.40 3.41
3519 3618 3.838271 GCTCCGCAGATCCGTGGA 61.838 66.667 10.77 10.77 43.28 4.02
3520 3619 3.451556 ATGCTCCGCAGATCCGTGG 62.452 63.158 1.78 1.78 43.65 4.94
3521 3620 1.953138 GATGCTCCGCAGATCCGTG 60.953 63.158 0.00 0.00 43.65 4.94
3522 3621 2.419198 GATGCTCCGCAGATCCGT 59.581 61.111 0.00 0.00 43.65 4.69
3523 3622 2.732468 CGATGCTCCGCAGATCCG 60.732 66.667 0.00 0.00 43.65 4.18
3524 3623 0.811616 AAACGATGCTCCGCAGATCC 60.812 55.000 0.00 0.00 43.65 3.36
3525 3624 1.009829 AAAACGATGCTCCGCAGATC 58.990 50.000 0.00 0.00 43.65 2.75
3526 3625 0.729116 CAAAACGATGCTCCGCAGAT 59.271 50.000 0.00 0.00 43.65 2.90
3527 3626 1.911293 GCAAAACGATGCTCCGCAGA 61.911 55.000 0.00 0.00 43.65 4.26
3528 3627 1.512734 GCAAAACGATGCTCCGCAG 60.513 57.895 0.00 0.00 43.65 5.18
3529 3628 2.560861 GCAAAACGATGCTCCGCA 59.439 55.556 0.00 0.00 44.86 5.69
3530 3629 2.202479 GGCAAAACGATGCTCCGC 60.202 61.111 11.18 0.00 45.68 5.54
3531 3630 2.485122 GGGCAAAACGATGCTCCG 59.515 61.111 11.18 0.00 45.68 4.63
3532 3631 2.485122 CGGGCAAAACGATGCTCC 59.515 61.111 11.18 9.80 44.15 4.70
3533 3632 2.202479 GCGGGCAAAACGATGCTC 60.202 61.111 11.18 7.32 45.68 4.26
3534 3633 2.672996 AGCGGGCAAAACGATGCT 60.673 55.556 11.18 0.00 45.68 3.79
3535 3634 1.366111 TAGAGCGGGCAAAACGATGC 61.366 55.000 0.00 0.00 45.67 3.91
3536 3635 1.062587 CTTAGAGCGGGCAAAACGATG 59.937 52.381 0.00 0.00 0.00 3.84
3537 3636 1.066430 TCTTAGAGCGGGCAAAACGAT 60.066 47.619 0.00 0.00 0.00 3.73
3538 3637 0.319083 TCTTAGAGCGGGCAAAACGA 59.681 50.000 0.00 0.00 0.00 3.85
3539 3638 0.442699 GTCTTAGAGCGGGCAAAACG 59.557 55.000 0.00 0.00 0.00 3.60
3540 3639 1.809684 AGTCTTAGAGCGGGCAAAAC 58.190 50.000 0.00 0.00 0.00 2.43
3541 3640 2.561478 AAGTCTTAGAGCGGGCAAAA 57.439 45.000 0.00 0.00 0.00 2.44
3542 3641 2.561478 AAAGTCTTAGAGCGGGCAAA 57.439 45.000 0.00 0.00 0.00 3.68
3543 3642 2.224426 TGAAAAGTCTTAGAGCGGGCAA 60.224 45.455 0.00 0.00 0.00 4.52
3544 3643 1.346395 TGAAAAGTCTTAGAGCGGGCA 59.654 47.619 0.00 0.00 0.00 5.36
3545 3644 1.732809 GTGAAAAGTCTTAGAGCGGGC 59.267 52.381 0.00 0.00 0.00 6.13
3546 3645 2.996621 CAGTGAAAAGTCTTAGAGCGGG 59.003 50.000 0.00 0.00 0.00 6.13
3547 3646 2.413453 GCAGTGAAAAGTCTTAGAGCGG 59.587 50.000 0.00 0.00 0.00 5.52
3548 3647 3.059884 TGCAGTGAAAAGTCTTAGAGCG 58.940 45.455 0.00 0.00 0.00 5.03
3549 3648 3.120373 GCTGCAGTGAAAAGTCTTAGAGC 60.120 47.826 16.64 0.00 0.00 4.09
3550 3649 4.314121 AGCTGCAGTGAAAAGTCTTAGAG 58.686 43.478 16.64 0.00 0.00 2.43
3551 3650 4.310769 GAGCTGCAGTGAAAAGTCTTAGA 58.689 43.478 16.64 0.00 0.00 2.10
3552 3651 3.434984 GGAGCTGCAGTGAAAAGTCTTAG 59.565 47.826 16.64 0.00 0.00 2.18
3553 3652 3.403038 GGAGCTGCAGTGAAAAGTCTTA 58.597 45.455 16.64 0.00 0.00 2.10
3554 3653 2.225467 GGAGCTGCAGTGAAAAGTCTT 58.775 47.619 16.64 0.00 0.00 3.01
3555 3654 1.875576 CGGAGCTGCAGTGAAAAGTCT 60.876 52.381 16.64 0.14 0.00 3.24
3556 3655 0.514691 CGGAGCTGCAGTGAAAAGTC 59.485 55.000 16.64 0.00 0.00 3.01
3557 3656 0.179045 ACGGAGCTGCAGTGAAAAGT 60.179 50.000 16.64 5.78 0.00 2.66
3558 3657 0.514691 GACGGAGCTGCAGTGAAAAG 59.485 55.000 16.64 5.14 0.00 2.27
3559 3658 0.884704 GGACGGAGCTGCAGTGAAAA 60.885 55.000 16.64 0.00 0.00 2.29
3560 3659 1.301716 GGACGGAGCTGCAGTGAAA 60.302 57.895 16.64 0.00 0.00 2.69
3561 3660 2.343758 GGACGGAGCTGCAGTGAA 59.656 61.111 16.64 0.00 0.00 3.18
3562 3661 4.056125 CGGACGGAGCTGCAGTGA 62.056 66.667 16.64 0.00 0.00 3.41
3584 3683 4.504916 CTCCACTGCTCCGCTCCG 62.505 72.222 0.00 0.00 0.00 4.63
3585 3684 4.828925 GCTCCACTGCTCCGCTCC 62.829 72.222 0.00 0.00 0.00 4.70
3589 3688 3.842923 ATCCGCTCCACTGCTCCG 61.843 66.667 0.00 0.00 0.00 4.63
3590 3689 2.202987 CATCCGCTCCACTGCTCC 60.203 66.667 0.00 0.00 0.00 4.70
3591 3690 2.202987 CCATCCGCTCCACTGCTC 60.203 66.667 0.00 0.00 0.00 4.26
3592 3691 2.685017 TCCATCCGCTCCACTGCT 60.685 61.111 0.00 0.00 0.00 4.24
3593 3692 2.512515 GTCCATCCGCTCCACTGC 60.513 66.667 0.00 0.00 0.00 4.40
3594 3693 1.448540 GTGTCCATCCGCTCCACTG 60.449 63.158 0.00 0.00 0.00 3.66
3595 3694 2.660064 GGTGTCCATCCGCTCCACT 61.660 63.158 0.00 0.00 0.00 4.00
3596 3695 2.125106 GGTGTCCATCCGCTCCAC 60.125 66.667 0.00 0.00 0.00 4.02
3597 3696 1.773856 TTTGGTGTCCATCCGCTCCA 61.774 55.000 0.00 0.00 31.53 3.86
3598 3697 1.002624 TTTGGTGTCCATCCGCTCC 60.003 57.895 0.00 0.00 31.53 4.70
3599 3698 1.635663 CGTTTGGTGTCCATCCGCTC 61.636 60.000 0.00 0.00 31.53 5.03
3600 3699 1.671054 CGTTTGGTGTCCATCCGCT 60.671 57.895 0.00 0.00 31.53 5.52
3601 3700 2.686816 CCGTTTGGTGTCCATCCGC 61.687 63.158 0.00 0.00 31.53 5.54
3602 3701 2.038269 CCCGTTTGGTGTCCATCCG 61.038 63.158 0.00 0.00 31.53 4.18
3603 3702 1.677633 CCCCGTTTGGTGTCCATCC 60.678 63.158 0.00 0.00 31.53 3.51
3604 3703 2.340328 GCCCCGTTTGGTGTCCATC 61.340 63.158 0.00 0.00 31.53 3.51
3605 3704 2.282887 GCCCCGTTTGGTGTCCAT 60.283 61.111 0.00 0.00 31.53 3.41
3606 3705 4.589675 GGCCCCGTTTGGTGTCCA 62.590 66.667 0.00 0.00 0.00 4.02
3607 3706 2.414658 TAAGGCCCCGTTTGGTGTCC 62.415 60.000 0.00 0.00 0.00 4.02
3608 3707 0.958876 CTAAGGCCCCGTTTGGTGTC 60.959 60.000 0.00 0.00 0.00 3.67
3609 3708 1.074248 CTAAGGCCCCGTTTGGTGT 59.926 57.895 0.00 0.00 0.00 4.16
3610 3709 0.034477 ATCTAAGGCCCCGTTTGGTG 60.034 55.000 0.00 0.00 0.00 4.17
3611 3710 0.702316 AATCTAAGGCCCCGTTTGGT 59.298 50.000 0.00 0.00 0.00 3.67
3612 3711 1.102978 CAATCTAAGGCCCCGTTTGG 58.897 55.000 0.00 0.00 0.00 3.28
3613 3712 1.102978 CCAATCTAAGGCCCCGTTTG 58.897 55.000 0.00 0.00 0.00 2.93
3614 3713 0.996583 TCCAATCTAAGGCCCCGTTT 59.003 50.000 0.00 0.00 0.00 3.60
3615 3714 0.255033 GTCCAATCTAAGGCCCCGTT 59.745 55.000 0.00 0.00 0.00 4.44
3616 3715 0.912487 TGTCCAATCTAAGGCCCCGT 60.912 55.000 0.00 0.00 0.00 5.28
3617 3716 0.254747 TTGTCCAATCTAAGGCCCCG 59.745 55.000 0.00 0.00 0.00 5.73
3618 3717 2.496070 GTTTTGTCCAATCTAAGGCCCC 59.504 50.000 0.00 0.00 0.00 5.80
3619 3718 3.056821 GTGTTTTGTCCAATCTAAGGCCC 60.057 47.826 0.00 0.00 0.00 5.80
3620 3719 3.572255 TGTGTTTTGTCCAATCTAAGGCC 59.428 43.478 0.00 0.00 0.00 5.19
3621 3720 4.846779 TGTGTTTTGTCCAATCTAAGGC 57.153 40.909 0.00 0.00 0.00 4.35
3622 3721 8.661352 AAAATTGTGTTTTGTCCAATCTAAGG 57.339 30.769 0.00 0.00 0.00 2.69
3623 3722 8.479280 CGAAAATTGTGTTTTGTCCAATCTAAG 58.521 33.333 0.00 0.00 0.00 2.18
3624 3723 7.976734 ACGAAAATTGTGTTTTGTCCAATCTAA 59.023 29.630 0.00 0.00 30.68 2.10
3625 3724 7.484975 ACGAAAATTGTGTTTTGTCCAATCTA 58.515 30.769 0.00 0.00 30.68 1.98
3626 3725 6.337356 ACGAAAATTGTGTTTTGTCCAATCT 58.663 32.000 0.00 0.00 30.68 2.40
3627 3726 6.475402 AGACGAAAATTGTGTTTTGTCCAATC 59.525 34.615 12.35 0.00 46.56 2.67
3628 3727 6.255453 CAGACGAAAATTGTGTTTTGTCCAAT 59.745 34.615 12.35 0.00 46.56 3.16
3629 3728 5.574830 CAGACGAAAATTGTGTTTTGTCCAA 59.425 36.000 12.35 0.00 46.56 3.53
3630 3729 5.098893 CAGACGAAAATTGTGTTTTGTCCA 58.901 37.500 12.35 0.00 46.56 4.02
3631 3730 4.502645 CCAGACGAAAATTGTGTTTTGTCC 59.497 41.667 12.35 0.00 46.56 4.02
3632 3731 5.336744 TCCAGACGAAAATTGTGTTTTGTC 58.663 37.500 9.17 9.17 46.08 3.18
3633 3732 5.317733 TCCAGACGAAAATTGTGTTTTGT 57.682 34.783 0.00 0.00 37.73 2.83
3634 3733 6.639671 TTTCCAGACGAAAATTGTGTTTTG 57.360 33.333 0.00 0.00 37.53 2.44
3635 3734 6.816140 ACATTTCCAGACGAAAATTGTGTTTT 59.184 30.769 0.00 0.00 43.61 2.43
3636 3735 6.337356 ACATTTCCAGACGAAAATTGTGTTT 58.663 32.000 0.00 0.00 43.61 2.83
3637 3736 5.901552 ACATTTCCAGACGAAAATTGTGTT 58.098 33.333 0.00 0.00 43.61 3.32
3638 3737 5.514274 ACATTTCCAGACGAAAATTGTGT 57.486 34.783 0.00 0.00 43.61 3.72
3639 3738 5.748152 ACAACATTTCCAGACGAAAATTGTG 59.252 36.000 13.24 1.71 44.32 3.33
3640 3739 5.901552 ACAACATTTCCAGACGAAAATTGT 58.098 33.333 10.22 10.22 43.61 2.71
3641 3740 6.344936 CGAACAACATTTCCAGACGAAAATTG 60.345 38.462 0.00 9.36 43.61 2.32
3642 3741 5.685511 CGAACAACATTTCCAGACGAAAATT 59.314 36.000 0.00 0.00 43.61 1.82
3643 3742 5.212194 CGAACAACATTTCCAGACGAAAAT 58.788 37.500 0.00 0.00 43.61 1.82
3644 3743 4.496673 CCGAACAACATTTCCAGACGAAAA 60.497 41.667 0.00 0.00 43.61 2.29
3645 3744 3.002862 CCGAACAACATTTCCAGACGAAA 59.997 43.478 0.00 0.00 44.49 3.46
3646 3745 2.546368 CCGAACAACATTTCCAGACGAA 59.454 45.455 0.00 0.00 0.00 3.85
3647 3746 2.139917 CCGAACAACATTTCCAGACGA 58.860 47.619 0.00 0.00 0.00 4.20
3648 3747 2.139917 TCCGAACAACATTTCCAGACG 58.860 47.619 0.00 0.00 0.00 4.18
3649 3748 3.399330 TCTCCGAACAACATTTCCAGAC 58.601 45.455 0.00 0.00 0.00 3.51
3650 3749 3.762407 TCTCCGAACAACATTTCCAGA 57.238 42.857 0.00 0.00 0.00 3.86
3651 3750 4.572389 CCTATCTCCGAACAACATTTCCAG 59.428 45.833 0.00 0.00 0.00 3.86
3652 3751 4.224147 TCCTATCTCCGAACAACATTTCCA 59.776 41.667 0.00 0.00 0.00 3.53
3653 3752 4.766375 TCCTATCTCCGAACAACATTTCC 58.234 43.478 0.00 0.00 0.00 3.13
3654 3753 6.106673 TCTTCCTATCTCCGAACAACATTTC 58.893 40.000 0.00 0.00 0.00 2.17
3655 3754 6.049955 TCTTCCTATCTCCGAACAACATTT 57.950 37.500 0.00 0.00 0.00 2.32
3656 3755 5.677319 TCTTCCTATCTCCGAACAACATT 57.323 39.130 0.00 0.00 0.00 2.71
3657 3756 5.878406 ATCTTCCTATCTCCGAACAACAT 57.122 39.130 0.00 0.00 0.00 2.71
3658 3757 6.127101 TCTATCTTCCTATCTCCGAACAACA 58.873 40.000 0.00 0.00 0.00 3.33
3659 3758 6.487331 TCTCTATCTTCCTATCTCCGAACAAC 59.513 42.308 0.00 0.00 0.00 3.32
3660 3759 6.602278 TCTCTATCTTCCTATCTCCGAACAA 58.398 40.000 0.00 0.00 0.00 2.83
3661 3760 6.043358 TCTCTCTATCTTCCTATCTCCGAACA 59.957 42.308 0.00 0.00 0.00 3.18
3662 3761 6.469410 TCTCTCTATCTTCCTATCTCCGAAC 58.531 44.000 0.00 0.00 0.00 3.95
3663 3762 6.271391 ACTCTCTCTATCTTCCTATCTCCGAA 59.729 42.308 0.00 0.00 0.00 4.30
3664 3763 5.783360 ACTCTCTCTATCTTCCTATCTCCGA 59.217 44.000 0.00 0.00 0.00 4.55
3665 3764 5.874810 CACTCTCTCTATCTTCCTATCTCCG 59.125 48.000 0.00 0.00 0.00 4.63
3666 3765 6.779860 ACACTCTCTCTATCTTCCTATCTCC 58.220 44.000 0.00 0.00 0.00 3.71
3667 3766 9.601217 GATACACTCTCTCTATCTTCCTATCTC 57.399 40.741 0.00 0.00 0.00 2.75
3668 3767 9.111519 TGATACACTCTCTCTATCTTCCTATCT 57.888 37.037 0.00 0.00 0.00 1.98
3669 3768 9.905713 ATGATACACTCTCTCTATCTTCCTATC 57.094 37.037 0.00 0.00 0.00 2.08
3670 3769 9.685276 CATGATACACTCTCTCTATCTTCCTAT 57.315 37.037 0.00 0.00 0.00 2.57
3671 3770 8.664992 ACATGATACACTCTCTCTATCTTCCTA 58.335 37.037 0.00 0.00 0.00 2.94
3672 3771 7.448161 CACATGATACACTCTCTCTATCTTCCT 59.552 40.741 0.00 0.00 0.00 3.36
3673 3772 7.592938 CACATGATACACTCTCTCTATCTTCC 58.407 42.308 0.00 0.00 0.00 3.46
3674 3773 7.083858 GCACATGATACACTCTCTCTATCTTC 58.916 42.308 0.00 0.00 0.00 2.87
3675 3774 6.548993 TGCACATGATACACTCTCTCTATCTT 59.451 38.462 0.00 0.00 0.00 2.40
3676 3775 6.016360 GTGCACATGATACACTCTCTCTATCT 60.016 42.308 13.17 0.00 0.00 1.98
3677 3776 6.148948 GTGCACATGATACACTCTCTCTATC 58.851 44.000 13.17 0.00 0.00 2.08
3678 3777 5.010516 GGTGCACATGATACACTCTCTCTAT 59.989 44.000 20.43 0.00 34.70 1.98
3679 3778 4.339530 GGTGCACATGATACACTCTCTCTA 59.660 45.833 20.43 0.00 34.70 2.43
3680 3779 3.131933 GGTGCACATGATACACTCTCTCT 59.868 47.826 20.43 0.00 34.70 3.10
3681 3780 3.131933 AGGTGCACATGATACACTCTCTC 59.868 47.826 20.43 0.00 34.70 3.20
3682 3781 3.102972 AGGTGCACATGATACACTCTCT 58.897 45.455 20.43 0.00 34.70 3.10
3683 3782 3.452474 GAGGTGCACATGATACACTCTC 58.548 50.000 20.43 7.87 34.70 3.20
3684 3783 2.159184 CGAGGTGCACATGATACACTCT 60.159 50.000 20.43 1.52 34.70 3.24
3685 3784 2.159240 TCGAGGTGCACATGATACACTC 60.159 50.000 20.43 11.83 34.70 3.51
3686 3785 1.824852 TCGAGGTGCACATGATACACT 59.175 47.619 20.43 3.15 34.70 3.55
3687 3786 2.196749 CTCGAGGTGCACATGATACAC 58.803 52.381 20.43 4.30 0.00 2.90
3688 3787 1.824852 ACTCGAGGTGCACATGATACA 59.175 47.619 20.43 0.00 0.00 2.29
3689 3788 2.586258 ACTCGAGGTGCACATGATAC 57.414 50.000 20.43 0.00 0.00 2.24
3690 3789 3.610040 AAACTCGAGGTGCACATGATA 57.390 42.857 20.43 0.00 0.00 2.15
3691 3790 2.479566 AAACTCGAGGTGCACATGAT 57.520 45.000 20.43 0.41 0.00 2.45
3692 3791 2.254546 AAAACTCGAGGTGCACATGA 57.745 45.000 20.43 11.67 0.00 3.07
3709 3808 2.099427 GGTACACCGGTTTGCAGAAAAA 59.901 45.455 2.97 0.00 0.00 1.94
3710 3809 1.677052 GGTACACCGGTTTGCAGAAAA 59.323 47.619 2.97 0.00 0.00 2.29
3711 3810 1.310904 GGTACACCGGTTTGCAGAAA 58.689 50.000 2.97 0.00 0.00 2.52
3712 3811 0.180642 TGGTACACCGGTTTGCAGAA 59.819 50.000 2.97 0.00 39.43 3.02
3713 3812 0.180642 TTGGTACACCGGTTTGCAGA 59.819 50.000 2.97 0.00 39.29 4.26
3714 3813 1.025812 TTTGGTACACCGGTTTGCAG 58.974 50.000 2.97 0.00 39.29 4.41
3715 3814 0.739561 GTTTGGTACACCGGTTTGCA 59.260 50.000 2.97 0.00 39.29 4.08
3716 3815 0.031043 GGTTTGGTACACCGGTTTGC 59.969 55.000 2.97 0.88 39.29 3.68
3717 3816 1.682740 AGGTTTGGTACACCGGTTTG 58.317 50.000 2.97 0.00 39.29 2.93
3718 3817 2.172293 TGTAGGTTTGGTACACCGGTTT 59.828 45.455 2.97 0.00 39.29 3.27
3719 3818 1.767681 TGTAGGTTTGGTACACCGGTT 59.232 47.619 2.97 0.00 39.29 4.44
3720 3819 1.422531 TGTAGGTTTGGTACACCGGT 58.577 50.000 0.00 0.00 39.29 5.28
3721 3820 2.547299 TTGTAGGTTTGGTACACCGG 57.453 50.000 0.00 0.00 39.29 5.28
3722 3821 3.004862 GGATTGTAGGTTTGGTACACCG 58.995 50.000 0.00 0.00 39.29 4.94
3723 3822 4.023726 TGGATTGTAGGTTTGGTACACC 57.976 45.455 0.00 0.00 39.29 4.16
3724 3823 5.007682 ACATGGATTGTAGGTTTGGTACAC 58.992 41.667 0.00 0.00 35.13 2.90
3725 3824 5.221945 TGACATGGATTGTAGGTTTGGTACA 60.222 40.000 0.00 0.00 39.18 2.90
3726 3825 5.250200 TGACATGGATTGTAGGTTTGGTAC 58.750 41.667 0.00 0.00 39.18 3.34
3727 3826 5.506730 TGACATGGATTGTAGGTTTGGTA 57.493 39.130 0.00 0.00 39.18 3.25
3728 3827 4.380843 TGACATGGATTGTAGGTTTGGT 57.619 40.909 0.00 0.00 39.18 3.67
3729 3828 5.720371 TTTGACATGGATTGTAGGTTTGG 57.280 39.130 0.00 0.00 39.18 3.28
3730 3829 6.748132 AGTTTTGACATGGATTGTAGGTTTG 58.252 36.000 0.00 0.00 39.18 2.93
3731 3830 6.976934 AGTTTTGACATGGATTGTAGGTTT 57.023 33.333 0.00 0.00 39.18 3.27
3732 3831 6.976934 AAGTTTTGACATGGATTGTAGGTT 57.023 33.333 0.00 0.00 39.18 3.50
3733 3832 6.015434 GGAAAGTTTTGACATGGATTGTAGGT 60.015 38.462 0.00 0.00 39.18 3.08
3734 3833 6.389906 GGAAAGTTTTGACATGGATTGTAGG 58.610 40.000 0.00 0.00 39.18 3.18
3735 3834 6.015519 TGGGAAAGTTTTGACATGGATTGTAG 60.016 38.462 0.00 0.00 39.18 2.74
3736 3835 5.835819 TGGGAAAGTTTTGACATGGATTGTA 59.164 36.000 0.00 0.00 39.18 2.41
3737 3836 4.653341 TGGGAAAGTTTTGACATGGATTGT 59.347 37.500 0.00 0.00 42.79 2.71
3738 3837 5.212532 TGGGAAAGTTTTGACATGGATTG 57.787 39.130 0.00 0.00 0.00 2.67
3739 3838 5.221702 CCTTGGGAAAGTTTTGACATGGATT 60.222 40.000 0.00 0.00 0.00 3.01
3740 3839 4.284234 CCTTGGGAAAGTTTTGACATGGAT 59.716 41.667 0.00 0.00 0.00 3.41
3741 3840 3.640967 CCTTGGGAAAGTTTTGACATGGA 59.359 43.478 0.00 0.00 0.00 3.41
3742 3841 3.640967 TCCTTGGGAAAGTTTTGACATGG 59.359 43.478 0.00 10.92 0.00 3.66
3743 3842 4.935352 TCCTTGGGAAAGTTTTGACATG 57.065 40.909 0.00 0.00 0.00 3.21
3744 3843 5.948742 TTTCCTTGGGAAAGTTTTGACAT 57.051 34.783 7.56 0.00 45.42 3.06
3757 3856 9.813826 ACCTAATTATCTTCATATTTCCTTGGG 57.186 33.333 0.00 0.00 0.00 4.12
3770 3869 9.771915 GCTACGTCTATGTACCTAATTATCTTC 57.228 37.037 0.00 0.00 0.00 2.87
3771 3870 9.293404 TGCTACGTCTATGTACCTAATTATCTT 57.707 33.333 0.00 0.00 0.00 2.40
3772 3871 8.859236 TGCTACGTCTATGTACCTAATTATCT 57.141 34.615 0.00 0.00 0.00 1.98
3780 3879 9.902684 AAGTATATATGCTACGTCTATGTACCT 57.097 33.333 3.55 0.00 0.00 3.08
3825 3924 9.996554 TCTCAAGTTGAGTTGAACTTATAATCA 57.003 29.630 27.83 4.52 42.96 2.57
3828 3927 9.607988 TGTTCTCAAGTTGAGTTGAACTTATAA 57.392 29.630 27.83 11.39 42.96 0.98
3829 3928 9.607988 TTGTTCTCAAGTTGAGTTGAACTTATA 57.392 29.630 27.83 10.24 42.96 0.98
3830 3929 8.506168 TTGTTCTCAAGTTGAGTTGAACTTAT 57.494 30.769 27.83 0.00 42.96 1.73
3831 3930 7.915293 TTGTTCTCAAGTTGAGTTGAACTTA 57.085 32.000 27.83 15.85 42.96 2.24
3832 3931 6.817765 TTGTTCTCAAGTTGAGTTGAACTT 57.182 33.333 27.83 0.00 45.17 2.66
3833 3932 6.817765 TTTGTTCTCAAGTTGAGTTGAACT 57.182 33.333 27.83 0.00 44.58 3.01
3834 3933 7.084486 ACTTTTGTTCTCAAGTTGAGTTGAAC 58.916 34.615 27.83 24.07 44.58 3.18
3835 3934 7.214467 ACTTTTGTTCTCAAGTTGAGTTGAA 57.786 32.000 27.83 15.42 44.58 2.69
3836 3935 6.817765 ACTTTTGTTCTCAAGTTGAGTTGA 57.182 33.333 27.83 15.04 44.58 3.18
3889 3988 9.036671 CCCGTTAACACTACATTTTCAAAATTT 57.963 29.630 6.39 0.00 0.00 1.82
3890 3989 8.198778 ACCCGTTAACACTACATTTTCAAAATT 58.801 29.630 6.39 0.00 0.00 1.82
3891 3990 7.718525 ACCCGTTAACACTACATTTTCAAAAT 58.281 30.769 6.39 0.00 0.00 1.82
3892 3991 7.098074 ACCCGTTAACACTACATTTTCAAAA 57.902 32.000 6.39 0.00 0.00 2.44
3893 3992 6.511444 CGACCCGTTAACACTACATTTTCAAA 60.511 38.462 6.39 0.00 0.00 2.69
3894 3993 5.050227 CGACCCGTTAACACTACATTTTCAA 60.050 40.000 6.39 0.00 0.00 2.69
3895 3994 4.448395 CGACCCGTTAACACTACATTTTCA 59.552 41.667 6.39 0.00 0.00 2.69
3896 3995 4.685628 TCGACCCGTTAACACTACATTTTC 59.314 41.667 6.39 0.00 0.00 2.29
3897 3996 4.630111 TCGACCCGTTAACACTACATTTT 58.370 39.130 6.39 0.00 0.00 1.82
3898 3997 4.255833 TCGACCCGTTAACACTACATTT 57.744 40.909 6.39 0.00 0.00 2.32
3899 3998 3.940209 TCGACCCGTTAACACTACATT 57.060 42.857 6.39 0.00 0.00 2.71
3900 3999 4.082081 TGAATCGACCCGTTAACACTACAT 60.082 41.667 6.39 0.00 0.00 2.29
3901 4000 3.255395 TGAATCGACCCGTTAACACTACA 59.745 43.478 6.39 0.00 0.00 2.74
3902 4001 3.836949 TGAATCGACCCGTTAACACTAC 58.163 45.455 6.39 0.00 0.00 2.73
3903 4002 4.724074 ATGAATCGACCCGTTAACACTA 57.276 40.909 6.39 0.00 0.00 2.74
3904 4003 3.604875 ATGAATCGACCCGTTAACACT 57.395 42.857 6.39 0.00 0.00 3.55
3905 4004 3.244579 GCTATGAATCGACCCGTTAACAC 59.755 47.826 6.39 0.00 0.00 3.32
3906 4005 3.450578 GCTATGAATCGACCCGTTAACA 58.549 45.455 6.39 0.00 0.00 2.41
3907 4006 2.798847 GGCTATGAATCGACCCGTTAAC 59.201 50.000 0.00 0.00 0.00 2.01
3908 4007 2.696707 AGGCTATGAATCGACCCGTTAA 59.303 45.455 0.00 0.00 0.00 2.01
3909 4008 2.313317 AGGCTATGAATCGACCCGTTA 58.687 47.619 0.00 0.00 0.00 3.18
3910 4009 1.120530 AGGCTATGAATCGACCCGTT 58.879 50.000 0.00 0.00 0.00 4.44
3911 4010 1.612463 GTAGGCTATGAATCGACCCGT 59.388 52.381 0.00 0.00 0.00 5.28
3912 4011 1.887198 AGTAGGCTATGAATCGACCCG 59.113 52.381 0.00 0.00 0.00 5.28
3913 4012 3.321111 TCAAGTAGGCTATGAATCGACCC 59.679 47.826 0.00 0.00 0.00 4.46
3914 4013 4.585955 TCAAGTAGGCTATGAATCGACC 57.414 45.455 0.00 0.00 0.00 4.79
3915 4014 7.224753 TCAATTTCAAGTAGGCTATGAATCGAC 59.775 37.037 10.49 0.00 33.45 4.20
3916 4015 7.272244 TCAATTTCAAGTAGGCTATGAATCGA 58.728 34.615 10.49 6.07 33.45 3.59
3917 4016 7.482654 TCAATTTCAAGTAGGCTATGAATCG 57.517 36.000 10.49 4.29 33.45 3.34
3920 4019 9.679661 TGTTATCAATTTCAAGTAGGCTATGAA 57.320 29.630 6.49 6.49 0.00 2.57
3921 4020 9.679661 TTGTTATCAATTTCAAGTAGGCTATGA 57.320 29.630 0.00 0.00 0.00 2.15
3922 4021 9.941664 CTTGTTATCAATTTCAAGTAGGCTATG 57.058 33.333 0.00 0.00 34.47 2.23
3923 4022 9.686683 ACTTGTTATCAATTTCAAGTAGGCTAT 57.313 29.630 0.00 0.00 45.31 2.97
3932 4031 9.753674 AGAGGGAATACTTGTTATCAATTTCAA 57.246 29.630 0.00 0.00 32.82 2.69
3933 4032 9.177608 CAGAGGGAATACTTGTTATCAATTTCA 57.822 33.333 0.00 0.00 32.82 2.69
3934 4033 9.178758 ACAGAGGGAATACTTGTTATCAATTTC 57.821 33.333 0.00 0.00 32.82 2.17
3938 4037 9.444600 GTTTACAGAGGGAATACTTGTTATCAA 57.555 33.333 0.00 0.00 0.00 2.57
3939 4038 8.598916 TGTTTACAGAGGGAATACTTGTTATCA 58.401 33.333 0.00 0.00 0.00 2.15
3940 4039 9.444600 TTGTTTACAGAGGGAATACTTGTTATC 57.555 33.333 0.00 0.00 0.00 1.75
3941 4040 9.802039 TTTGTTTACAGAGGGAATACTTGTTAT 57.198 29.630 0.00 0.00 0.00 1.89
3942 4041 9.802039 ATTTGTTTACAGAGGGAATACTTGTTA 57.198 29.630 0.00 0.00 0.00 2.41
3943 4042 8.706322 ATTTGTTTACAGAGGGAATACTTGTT 57.294 30.769 0.00 0.00 0.00 2.83
3944 4043 9.975218 ATATTTGTTTACAGAGGGAATACTTGT 57.025 29.630 0.00 0.00 0.00 3.16
3951 4050 8.455682 CGCTTTTATATTTGTTTACAGAGGGAA 58.544 33.333 0.00 0.00 0.00 3.97
3952 4051 7.608761 ACGCTTTTATATTTGTTTACAGAGGGA 59.391 33.333 0.00 0.00 0.00 4.20
3953 4052 7.758495 ACGCTTTTATATTTGTTTACAGAGGG 58.242 34.615 0.00 0.00 0.00 4.30
3954 4053 9.620660 AAACGCTTTTATATTTGTTTACAGAGG 57.379 29.630 0.00 0.00 0.00 3.69
3970 4069 9.918630 ACTAAAGTAGTGATCTAAACGCTTTTA 57.081 29.630 10.23 0.00 37.69 1.52
3971 4070 8.828688 ACTAAAGTAGTGATCTAAACGCTTTT 57.171 30.769 10.23 0.00 37.69 2.27
3972 4071 9.918630 TTACTAAAGTAGTGATCTAAACGCTTT 57.081 29.630 0.00 3.97 39.81 3.51
3974 4073 9.733219 GATTACTAAAGTAGTGATCTAAACGCT 57.267 33.333 11.11 0.00 44.10 5.07
4003 4102 9.853177 CCCTCCATAAAGAAATATAAGAGTGTT 57.147 33.333 0.00 0.00 0.00 3.32
4004 4103 9.225682 TCCCTCCATAAAGAAATATAAGAGTGT 57.774 33.333 0.00 0.00 0.00 3.55
4005 4104 9.717942 CTCCCTCCATAAAGAAATATAAGAGTG 57.282 37.037 0.00 0.00 0.00 3.51
4006 4105 9.453830 ACTCCCTCCATAAAGAAATATAAGAGT 57.546 33.333 0.00 0.00 0.00 3.24
4050 4149 4.996758 TCGAGAAGCAGAAATGACAAATCA 59.003 37.500 0.00 0.00 39.83 2.57
4051 4150 5.536554 TCGAGAAGCAGAAATGACAAATC 57.463 39.130 0.00 0.00 0.00 2.17
4052 4151 5.413833 ACATCGAGAAGCAGAAATGACAAAT 59.586 36.000 0.00 0.00 0.00 2.32
4053 4152 4.756642 ACATCGAGAAGCAGAAATGACAAA 59.243 37.500 0.00 0.00 0.00 2.83
4054 4153 4.318332 ACATCGAGAAGCAGAAATGACAA 58.682 39.130 0.00 0.00 0.00 3.18
4055 4154 3.928992 GACATCGAGAAGCAGAAATGACA 59.071 43.478 0.00 0.00 0.00 3.58
4056 4155 3.000277 CGACATCGAGAAGCAGAAATGAC 60.000 47.826 0.00 0.00 43.02 3.06
4057 4156 3.119495 TCGACATCGAGAAGCAGAAATGA 60.119 43.478 0.00 0.00 44.22 2.57
4058 4157 3.182182 TCGACATCGAGAAGCAGAAATG 58.818 45.455 0.00 0.00 44.22 2.32
4059 4158 3.510388 TCGACATCGAGAAGCAGAAAT 57.490 42.857 0.00 0.00 44.22 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.