>input_sequence_38172
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---------------------------------------------------------------------ATGAACTGCGA
GACGTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA----
---------------ACGAATTCAGGCCTTCTTGCTTGTAGGAGCTGGAGCCACTGGAGATCAAAGACGTGCTGCGATGT
AAGTTCTAGTTTTTCCCCTTCGATCCCCTCTTCCATGCTTCTGCTCCACTGTTCCAATTTTTGCCTTCTTGTGTTCCCTC
TTTTACTAG---------------TTTAGTA-----------------------GTAGCCGAAATCTACTCTTTGATACT
GATGTACTGAATAGTAGCAGTAGTAGTT--TAATTTACGAGTATATCGTGGCCCCGTTATTTATGTCCTAGTCTGATTAG
TTGCAACTACTGTACTGATGTGCCGGAGATTGATTCCCTGAGCTCCTTGTTTCATGTTGGCATTTGCACTTGTGCAAA-A
GGAAAACTGAAGCAATTGC----ATTCCTCTCTGCAATTAGTCTTCAAACGGACCAGTTATAACAAACGTGTCTGCTATT
CTTTTTAGTGTGGTTCTCTTTACTCTGTTCCTAATGATTATCGTGTATGAATCTGTTGCAGGCATCTTGCACACTATATT
CTTTCATCGAACCCTCACTCTTGTCCGGCCCAAGGATGTTGACTGCGACCTCTTTGAGATCACATATGTGAGTATTACTG
AAT----AGCTGCAGTAACTCTTATCTCCTCCATGTATTTGGTGTTGCAGACAATATTACTTAGCTCCAAGATATATGCT
GGTGTGCTCCATGATATTATTTGACCTGCTCCAACTAAAAGAACCATCGTTGATGTCATTTGTGTTTGTGTGGTCAGGTT
CAATGTGGACTTGCAGAACTAGAAAAGGAGGTTGATGAAAAGATCAACCAGTTCATTGCTTGGTCAGAAAAGCATCCAAA
TCGGAAAAGCCAGGTTGTTCGATAAGGCTGAACAACATATTTCTACTATTTGCATATATTTCTACTATTTGCATGTTTTT
TATTATTTTCGTTTTAACACATGGTAGCTGAATATCAGGTGTGCCTCTCTTTCTTCGATGAGAAGAACAAGCACCCAGGC
TGGTTCAGCAGCAAGACTGAGAGGGTTTTCTGGGAACAATGGTTCATCAATTTGCATGTCACAAGCCCTAAAGGGCAAGG
CAAATCACGTGGCTCCAAAGCACCGGCAAATACTAAAGGTAGTTCCATTTTCATTGACAGGGTCTGTTTCATGGCTCCTC
GCTAGGGCTCAAACCTAGGTTGAGGGTGTGTGTCTCCATGCTCTCTGCCACTCTGGACTCGTAGGAATAGTTTTGCTAAT
TATGTCATCTTCGGGATGGTATTGCTTATGAGCATATAACAAATCAGTTACAACTTGTTGTTAACTTGCGATGATATGTG
CCCTCAGGACAAGCATTGGAAGAGACCAGCTCAAGACGTGATGCGCTAAGCTTGCTGATCCAAGAAGTCCTGTTCCAGAT
CATTAACTACGCCAATGAGAAAAAAGACCATATTCCTCCAATCTCCGACAGAATATTCAATCATGAGATTTTGGTCCCCA
GGTGCGTTCAGTTTTATACTTGACTATTTTAACCGGCAACCTTCTTTGATACTGAGTAGTCTCTGCAAGTTTGTTGGGAT
TATTTCATCACTATCTGAATCTCCAGGTGACACCTTTTCCTTGGACGTGTGTTCACAGCTCTTCTGATTCCGTATTCGGG
TGGAACGCCGACGTTCTTCGGAGGGCATTGAGTAGTGGACATTCGTACTCACTGAACTGA--------------------
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>chr2A_1_TraesCS2A01G518700
TAAAGATGGGCACGATCGTTGATGTTAAAATAATTGAGGCAACTCTAACAACTGAGAAATGAGGGGGAAAACAAAGAGAG
CTAGCATGCTCGGCTGCTCCTCGATGAAACTAAATCGGGATAAAACCATCCTTTACGCCGAGAATGAATCCTAAACTGCC
CAATC-AATCGGTTCGTCGCGTCAGAGCAGTTGGTAATAGCCGAGAGCTTGAAATCAGTGCCCAAGTTCACTGGGACAGA
CGCGGATCGAACATCACTGACACAGGGAGGAGCCACCGAGCATCCCCTTGTGCAGGGGAAAC---------AAGAATCTG
GCCGCAGCATCGCTGCTTCATAGCATATGCTTCCATCGACAAGTAGAAAAATACATACACCCAGGCACATCCGGCGAATC
TACCGAGTTCTTGGCTGATTATGCCGAGATTTGCGAGGAGAGGAGCGCAGCGCGGGGGCGGGAGCAGAAGCTGAGATACG
AACGTACCGAGACCGTGCCG------------GCTTGCCCCGGTGGCTGCTGAGACGGCGCCCCCGGT-GCCGCGCGCGC
TCGCCGCCGGTGGGGAGGAGGAAGCGGAGGAGGGGGCAGGCGTCGGCTGTCGTTGGCGTTTTT-GGGCGGGGGCGGCGGG
AAACCAGCGCGCGCAAACCCTAGCGAAGCGGCTGAAAACTCCCTCCGTGACCGTGTCCGTCTCTCGCTCCCTGACGTCAC
CCCGAGCACCGCGGT-CCCACCTGTAATCTCCCGGCCTGTCAGTTGTCCGGGCCCACCTGTCAGTCGCGGCCCGCGGGCC
TTGGTAGTAAGAAAAGGGAACCAACCGAGCCACTGGGCCGCCGGGGAGAGGCTTGCGTTTGCGTTGCGTGCTGAGGAGCG
GAGGAGGCAGGAGCCGGCGTCGTGTTTGAGTAGGAGTAGGATAAGCGGATTGCTCTCTCGCCTGTGGGGATTTCCGGCGA
GAAGGACTCGAGGCGAGCGGATCGAGAGCGCCCGCCCGCCCGCCCGA----CCTCGCCGATCAGCCGCGATGAACTGCGA
GACGTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA----
---------------ACGAATTCAGGCCTTCTTGCTTGTAGGAGCTGGAGCCACTGGAGATCAAAGACGTGCTGCGATGT
AAGTTCTAGTTTTTCCCCTTCGATCCCCTCTTCCATGCTTCTGCTCCACTGTTCCAATTTTTGCCTTCTTGTGTTCCCTC
TTTTACTAG---------------TTTAGTA-----------------------GTAGCCGAAATCTACTCTTTGATACT
GATGTACTGAATAGTAGCAGTAGTAGTT--TAATTTACGAGTATATCGTGGCCCCGTTATTTATGTCCTAGTCTGATTAG
TTGCAACTACTGTACTGATGTGCCGGAGATTGATTCCCTGAGCTCCTTGTTTCATGTTGGCATTTGCACTTGTGCAAA-A
GGAAAACTGAAGCAATTGC----ATTCCTCTCTGCAATTAGTCTTCAAACGGACCAGTTATAACAAACGTGTCTGCTATT
CTTTTTAGTGTGGTTCTCTTTACTCTGTTCCTAATGATTATCGTGTATGAATCTGTTGCAGGCATCTTGCACACTATATT
CTTTCATCGAACCCTCACTCTTGTCCGGCCCAAGGATGTTGACTGCGACCTCTTTGAGATCACATATGTGAGTATTACTG
AAT----AGCTGCAGTAACTCTTATCTCCTCCATGTATTTGGTGTTGCAGACAATATTACTTAGCTCCAAGATATATGCT
GGTGTGCTCCATGATATTATTTGACCTGCTCCAACTAAAAGAACCATCGTTGATGTCATTTGTGTTTGTGTGGTCAGGTT
CAATGTGGACTTGCAGAACTAGAAAAGGAGGTTGATGAAAAGATCAACCAGTTCATTGCTTGGTCAGAAAAGCATCCAAA
TCGGAAAAGCCAGGTTGTTCGATAAGGCTGAACAACATATTTCTACTATTTGCATATATTTCTACTATTTGCATGTTTTT
TATTATTTTCGTTTTAACACATGGTAGCTGAATATCAGGTGTGCCTCTCTTTCTTCGATGAGAAGAACAAGCACCCAGGC
TGGTTCAGCAGCAAGACTGAGAGGGTTTTCTGGGAACAATGGTTCATCAATTTGCATGTCACAAGCCCTAAAGGGCAAGG
CAAATCACGTGGCTCCAAAGCACCGGCAAATACTAAAGGTAGTTCCATTTTCATTGACAGGGTCTGTTTCATGGCTCCTC
GCTAGGGCTCAAACCTAGGTTGAGGGTGTGTGTCTCCATGCTCTCTGCCACTCTGGACTCGTAGGAATAGTTTTGCTAAT
TATGTCATCTTCGGGATGGTATTGCTTATGAGCATATAACAAATCAGTTACAACTTGTTGTTAACTTGCGATGATATGTG
CCCTCAGGACAAGCATTGGAAGAGACCAGCTCAAGACGTGATGCGCTAAGCTTGCTGATCCAAGAAGTCCTGTTCCAGAT
CATTAACTACGCCAATGAGAAAAAAGACCATATTCCTCCAATCTCCGACAGAATATTCAATCATGAGATTTTGGTCCCCA
GGTGCGTTCAGTTTTATACTTGACTATTTTAACCGGCAACCTTCTTTGATACTGAGTAGTCTCTGCAAGTTTGTTGGGAT
TATTTCATCACTATCTGAATCTCCAGGTGACACCTTTTCCTTGGACGTGTGTTCACAGCTCTTCTGATTCCGTATTCGGG
TGGAACGCCGACGTTCTTCGGAGGGCATTGAGTAGTGGACATTCGTACTCACTGAACTGAAGATCTTTGTTAGAAACTGC
ACTAAACGAAGATGTTGGTATCGGTGTGCTACCTTTCATGGTGATAAGACGTTGCCCCTTTCTCACCTCTCCATTGATCG
TTTGGTTATAAGACGTCGTCAGAGCTGCTGACTCATGGAAGC-AATGTTGTGTACAGAATAATGTAGAACTGCCAGTGAA
CTGACTCTCTTACCCATCCAATCATGTAATTCCCACTTGTTTAGCTGTAAATATTTCTCTTGACAATCTGTGTCCAAAAA
ATATTACCATGTTATTATGCAGATGTGAAAAATATGTGCATTCCGGATGTTATGTGCAGTGGTGTTTATTCGGTGTGCTG
ACATAAGGAAGAAAACTGGGGTAGGAAGCTGTTTTGACTGATTATATTGCCACTTTTAGGCCCCGTTCGGCAATGCGCCA
TTGCCGGCTCCGTGAAATCCACGGATCTGCGGAGCATCGTTTTGCCCGCTCTAAGACTTTTCACTGCAGCTCCGTCCGCT
CCCGGAGCGGAGCAGTGGAGCGGATGGACACCAAACGGGGCCTTAGATTGGACAAAACACAATTTTCGTCTGGAAATGTT
GTTCGGAGATAGGAAGATAGAGAGAGTGTATCATGTGCACCTCGAGTTTTTTCTGCAAACCGGTGTACCAAACCTACAAT
CCATGTCAAAACTTTCCCAAGGAAATATGAAGATAATTAGGTACATAGACGTAGCATATATACTTATCATGTCACAAATA
TTTTGATTATAAGTTCAACTCAACTTGAGAACAAAAGTAATAAAACATTTTAGTGTACAAAAATAGTAAATTTTGAAAAT
GTAGTGTTAACGGGTCGATTCATAGCCTACTTGAAATTGATAACAAGTATTCCCTCTGTAAACAAATATAAAAGCGTTTA
GATCACTACTTTAGTAATCTAAACACTCTTATATTTCTTTATGGAGGGAGTATTAAACATTAATAGAATGATTTGTCATT
TCTGCTTCTCGATGTCGAACT
>chr2D_1
TAAAGATGGGCACAATCGCTGATGTTAAAATAATTGAGGCAACTCTAACAACTGAGAAATGAGGGGAAAAACAGAGAGAG
CTAGCATGCTCGGCTGTTCCTGGACGAAACTAAAACAGGATAAAACCATCCTTTATGCCGAGAATGAATCCTAAACTGCC
CAATTGAATCGGTTCGCCGCGTCGGAGCAGTTTGTAACAGTCGGGAGCCTGAAATCAGTGCTCGGGTTCTCTGGAACAGA
CGCGGATCAAGCATCACTGACACAGGGAGGAGCCACCGAGCATCCCCCTTGTGCAATCACAAGGGAAAACTAAGAATCTG
GCCGCAGCATCGCTGCTTCATAGCATACGCTTCCATCGACGAGTAGAAAAATACAGATACCCAGGCACATCCGGCGAATC
TACCGAGTTCTTGGCTGATTACGCCGAGATTTGCGAGGAGAGGAGCGCAGCGCGGGGGCTGGAGCAGAAGCTGAGATGCG
TACGTACCGAGACCTCGCCCGCGGCGGCCGTCGCTTGCCCCGGTGGCTGCTGAGACGGCGCC----------GCGCGCGC
TCGCCGCCGTGGGTGAGGAGGG------GGAGGGGGGAGGCGTCGGCTGTCGTTGGCGTTTTT-GGGCGGAGGCGGCGGG
AAACCAGCGCGCGCAAACCCTAGCGAAGCGGCTGAAAACTTCCCCT------GTGTCCGTCTCTCCTGTGGTGACGTCAC
CCCGAGCACCGCGGGCCCCACCTGTAAGCTCCCGGCCTGTCAGATGCTCGGGCCCATCTGTCAGTCACGGCCCGCGGGCC
TTGGTAGTAAGAAAAGGGAACCAACCGAGCCACTGGGCCGCCGAGGAGAGGCTTGCG------TTGCGTGCTGAGGAGCG
GAGGAGGCAGGAGCCGGCGTCGTGTTTGAGTAGGAGTAGGATAAGCGGATTGCTCTCTCGCCTGTGGGGATTTCCGGCGA
GAAGGACTCGAGGCGAGCGGATCGAGAGCG----CCCGCCCGCCCGGCCGGCCTCGCCGATCAGCCGCGATGAACTGCGA
GACGTGCCACCTCAACGAACTGGTCAGATCCGATCCGGACCCCCTCTCCCTT----------------------------
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--------------------------------------------------------------------CCCCCCTGATTT
CTCCTTGCGTTCCTGACGAATTCAGGTCTTCTTGGTTGTAGGAGCTGGAGCCGCTGGAGATCAAAGATGTGCTGCGATGT
AAGTTCTGGTCTTTCCCCTTCGATTCCCTCTTCCATGCTTCTGCTCTGCTGTTCCAATTTTTGCCTTCTTGTGTTCCCCC
TTTTACTAG---------------T--------TTATTAGTACATGTGTATATGGTAGCCGAAATCCACTCTTTGATACT
GATGTAGTACTGAGTAGTAGTAGCAGTTTATAATTTACTAGTATATCGTGGCCCCGTTATTTATGTCGTGGTCTGATTAG
TTGCAACTGCTGTACTGCTGTGCCGGAAATTGATTCCGTGAGCTCCTTGTTTCATGTTGGCATTTGCACTTGTGCAAAAA
GAAAAACGGAAGCAATTGC----ATTGCTCTCTGCATTTAGTCTTCAAACGGACCAGTTATAACAAACGTGTCTGCTATT
CTTTTTAGTGTGGTTCTCTTTACCGTGTTCCTAATGATTATCATGTATGAATGTGTTGCAGGCATCTTGCATACTATATT
CTTTCATCGAACCCTCACTCTTGTTCGGCCCAAGGATGTTGACTGCGACCTCTTTGAGATCACATATGTGAGTATTACTG
AA----TAGCTGCAATAACTC-TATCTCCTCCATGTATTTGGTGTTGCGGACAATATTACTTAGCTCCAAGATATATGCT
GGTGTGCTGATCTTTG-----TGACCTGCTCCATCTGAAAAAA-CATCTTTGATGTTATTTGTGTTTGTGTGGTCAGGTT
CAATGTGGACTTGCAGAACTAGAAAAGGAAGTTGATGAAAAGATCAACCAGTTCATTGCTTGGGCTGAAAAGCATCCAAA
TCGGAAAAGCCAGGTTGTGCGATAAGGCTGAACAACATATG--------------------CTACTATTTGCATGTTTTT
TAGGATTTTCGTTTTAACACATGGTAACTGAACATCAGGTGTGCCTCTCGTTCTTCGATGAGAAGAACAAGCACCCAGGC
TGGTTCAGCAGCAAGACTGAGAGGGTTTACTGGGAACAATGGTTCATCAATTTGCATGTCACAAGCCCTAAAGGGCAAGG
CAAATCACGTGGCTCCAAAGCGCCAGCAAATACTAAAGGTAGTTCCATTTTTATAAGCAGAGTCATTTTCATGGCAACTC
GCTAGCACTCAAACCCAGGTCGAGGGTGTGTGTCTCCCTGCTCTCCGCCACTCCGGACTCGTAGGAATAGTTTTGCTAAT
TATGCCATCTTCTTGATGTTATTGCTTATGAGCATATAACAAATCAGTTATAAC---TCGTTAACTTGTGATGATATGTG
CCCTCAGGACAAGCATTGGAAGAGACCAGCTCAAGACGTGATGCGCTGAGCTTGCTGATCCAAGAAGTCCTGTTCCAGAT
CATTAACTACGCCAATGAGAAAAAAGACCATATTCCTCCAATCTCTGACAGAATATTCAATCATGAGATTTTGGTCCCCA
GGTGCGTTCAGTTTTATACTTGACTATTTTAATCGGCAACCTTCTTTGATACCGAGTAGTCTCTGCAAGTTTGTTGGGAT
TATTTCATCACTATCTGAATCTCCAGGTGACACCTTTTCCTTGGACGTGTGTTCACAGCTCTTCTGATTCTGTATTCGGG
TGGAACGCCGACGTTCTTCGGAGGGCATTGAGTAGTGGACATTCGTACTCACTGAACTGAAGATCTTTGTTAGAGACTGC
ACTAAACGAAGATGTTGGTATCGGTGTGCTACCTTTCACAGTGATAAGACGTTGCCCCTTTCTCACCTCTCCGTTGATCG
TTTGGTTATAAGACGTCGTCAGAGCTGCTGACTCATGGAAGCAAATGTTGTGTACAGAATAATGTAGAAC-GCCAGTGAA
CTGACTCTGTTACCCATCCAATCATGTAATTCCCACTTGTTTAGCTGTAAATATTTCTCTTGACAATCTGTGTCAAAAAA
ATATTATGTC------ATGCAGATGTGAAAA-------------------------------------------------
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>chr2B_379
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--------------------------------------------------------------------ATCCGGCGAATC
TGCCGAGGAGCTCGACTGATTCGCCGAGATATGCGAAGAGAGGAACGCAGCGCGGAGGGGGGAGCAG-AGCTGAGATGCG
TACGTACCGAG---------------GCCGGCGCTTGCCTCGGTGGCTGTAGAGACGGCTCCCCCGGACGCTGCACGCGC
TCGCCGCCGTGGGTGAGGAGGA------GGAGGGGG-AGGCGTCGGCTGTTGCTCGCTTTTTTGGGGCGGAGGCGGCGGG
AAACAAGCGCGCCCAAACCCTAGCGAAGCGGCTGAAAACTTCCTCT------GTGTCCGTCTCTCCCCTGCTGACGTCAC
CGCGAGCCCCAC--------CCTGTAAGCTCCCGGCCTGTCAGATGTTCGGGCCCACCTGTCAGTCGCGGCCCGCGGGCC
TTGGTAGTAAGAAAAGGGAACCAACCGAGCCACTGGGCCGCCGAGGAGAGGCTTGCG------TTGCGTGCTG-------
---GAGGCAGGAGCCGGCGTCGTGTTTGGGTAGGAGTAGGATAAGCGGATTGCTCTCTCGCCTGTGGGGATTTCCGGCGA
GAAGGACT-----CGAGCGGATCGAGTGCG----CCCGCCCGCCCGA----CCTCGCCGATCAGCCGCGATGAACTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTGATCCCCCCATGATTT
CTCGTTGCGTTCCTGACG-ATTCAGGTCTTCTTGGTTGCAGGAGCTGGAGCCGCTGGAGATCAAAGACGTGCTGCGATGT
AAGTTCTAGTCTTTCCCCTTCGATCCCCTCTTCCATGCTTCTGCTCCACTGTTCCAATTTTTGCCTTCTTGTGTTCCCCT
TCTACTACTAGTTTATTATTAGTATA----------------CATGTATATATGGTAGCCGAAATCCACTCTTTGATACT
GATGTACTGAGCAGTAGCAGTAGTAGTT--CAATTTACTAGTATATCGTGGCCC-GTTATTTATGCCGTGGTCTGATTAG
TTGCAACTGCTGTACTGATGTGTTGGGGATTGATTCCCTGAGCTCCTTGTTTTATGTTGACATTTGCACTGCA--AAA-A
GAAAAACTGAAGTAATTGC----GTTCCTCTCTGCAATTAATCTTCAAACGGACCAGTTATAACAAACGTGTCTGCTATT
CGTTTTAGTGTGGTTCTCTTTACTGTGTTCCTACTGATTATTATGTATGAATGTGTTGCAGGCATCTTGCATACAATATT
CTTTCATCGAACCCTCACTCTTGTTCGGCCCAAGGATGTCGACTGCGACCTCTTTGAGATCACATATGTGAGTATTGCTG
AATAACTAGCTGCATTAACTC-CATCTCCTCCATATATTTGGTGTTGCAGACAATATTACTTAGCACCAAGATATATGCT
GGTGTGCCCCACGATATTGTTTGACCTGCTCCAACTAAAAGAACCATCTTTGATGTTACTTGTGTTTGTGTGGTCAGGTT
CAATGTGGACTTGCAGAACTAGAAAAGGAGGTCGATGAAAAGATCAACCAGTTCATTGCTTGGGCTGAAAAGCATCCAAA
TCGGAAAAGCCAGGTTGTTCGATAAGGCTGAACAACATATTTCTACTATTTGCATGTTTTTTTTTTATGAT---------
-----TTGTCGTTTTGACACATGGTAGCTGAATATCAGGTGTGCCTCTCGTTCTTCGATGAGAAGAACAAGCACCCAGGC
TGGTTCAGCAGCAAGACTGAGAGGGTTTACTGGGAACAATGGTTCATCAATTTGCATGTCACAAGCCCTAAAGGACAAGG
CAAATCACGTGGCTCCAAAGCGCCGGCGAATACTAAAGGTAGTTCCATTTTTATTGACAGGGTCTCTTTCATGGCTCCTC
GCTAGATCTCAAACCTAGGTCGAGGGTGTGTGTCTCCCTGCTCTCCGCCACTTCGGACTCATAGGAATAGTTTTGCTAAT
TATGTCATCTTCAGGATGGTATTGCTTATGAGCATGTAACAAATCAGTTATAACTCGTCGTTAACTTGTGATGATTTGTG
CCCTCAGGACAAGCATTGGAAGAGACCAGCTCAAGACGTGATGCGCTGAGCTTGCTGATCCAAGAAGTCCTGTTCCAGAT
CATTAACTACGCCAATGAGAAAAAAGACCATATTCCTCCAATCTCTGATAGAATATTCAATCATGAGATTTTGGTCCCCA
GGTGCGTTCAGTTTCATTCTTGACTATTTTAACCGGCAACCTTCTTTGATACCGAGTAGCCTCTGCAAGTTTGTTGGGAT
TATTTCATCACTATCTGAATCTCCAGGTGACACCTTTTCCTTGGACGTGTGTTCACAGCTCTTCTGATTCTGTATTCGGG
TGGAACGCCGACGTTCTTCGGAGGGCATTGAGTAGTGGACATTCATACTCACTGAACTGAAGATCTTTGTTAGAAACTGC
ACTAAACGAAGATGTTGGTATCGGTGTGCTACCTTTCGCAGTGATAAGACGTTGCCCCTTTCTCACCTCTCCGTTGATCG
TTTGGTTATAAGACGTTGTCAGAGCTGCTGACTCATGGAAGCAA-TGCTGTGTACAGAATAATCTAGAACTGCCAGTGAA
CTGACTCTGTTACCCATCCAATCATGTAATTCCTACTTGTTTAGTTGTAAATATTTCTCTCGACAATCTGTGTCCAAAAA
TTATTACCATGTTATTATGCAGATGTGAAAAACATGTGTACTCCGGATGTTATGTGCAGTGGTGTTTATTCAGTATTCTG
ACATAAGGAAGAAAACTGGAGTAGGAAGCTGTTTTGACTGATTATATTGCCACTTTT-----------------------
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>chr3A_1408
ACGAT---------------------------------------------------------------------------
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---------------------TCGGGCCTTCTTGTTTGTAGGACCTGGAGCCGCTGGAGATCAAAGATGTGCTGCGATGT
AAGTTCTAGTTTTTCCCCTTTGATTCCCTCTTCCATGCTTCTGCTCTGCTATTCCAGTTTTTGCCTT-TTGTGTTCCCTC
TTTTACTAG---------------TA----------------CATGTATATATGGTAGCCCAAATCCACTCTTTGATACT
GATGTACAGAGCAGTAGCAATAGTAGTT--CAATTTACTAGTATATCGTGGCCC-GTCATTTATGCCGTGGTCTGATTAG
TTGCAACTGCTGTACTGATGTGTTGGGGATTGATTCCTTGAGCTCCTTGTTTCATGTTGACATTTGCACTTGTGCGAAAA
GAAAAACTGAAGCAATTGCTTGCGTTCCTTTCTACAATTAGTCTTCAAACGGACCAGTTATAACAAACGTGTCTGCTATT
CTTTTTAGTGTATTTCTCTTTACTGTGTTCCTAATGATTGTCATGTATGAATGTGTTGCAGGCATCTTGCATACCATATT
CT------------------------------------------------------------------------------
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>chr3A_1408
ACGAT---------------------------------------------------------------------------
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---------------------TCGGGCCTTCTTGTTTGTAGGACCTGGAGCCGCTGGAGATCAAAGATGTGCTGCGATGT
AAGTTCTAGTTTTTCCCCTTCGATTACCTCTTCCATGCTTCTGCTCTGCTATTCCAATTTTTGCCTT-TTATGTTCCCTC
TTTTACTAG---------------TA----------------CATGTATATATGGTAGCCGAAATCCACTCTTTGATACT
GATGTACAGAGCAGTAGCAGTAGTAGTT--CAATTTACTAGTATATCATGGCCC-GTTATTTATGCCGTGGTATGATTAG
TTGCAACTGCTGTACTGATATGTTGGGGATTGATTCCTTGAGCTCCTT-TTTCATGTTAACATTTGCACTTGTGTGAAAA
GAAAAACTGAAGCAATTGCTTGCGTTCCTTTCTACAATTAGTCTTCAAACAGACCAGTTATAACAAATGTGTCTGCTATT
CTTTTTAGTGCAGTTCTCTTTACTGTGTTCCTAATGATTGTCATGTATGAATGTGTTGCAGGCATCTTGCATACCATATT
CT------------------------------------------------------------------------------
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>chr3B_1408
ACGAT---------------------------------------------------------------------------
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---------------------TCGGGCCTTCTTGTTTGTAGGAGCTGGAGCCGCTGGAGATCAAAGATGTGCTGCGATGT
AAGTTCTAGTTTTTCCCCTTTGATCCCCTCTTCCATGCTTCTGCTCTGCTATTCCAATTTTTGCCTT-TTGTGTTCCCTC
TTTTACTAG---------------TATAGTAGTTTATTAGTACATGTATATATGGTAGCTGAAATCCACTCTTTGATACT
GATGTACCGAGCAGTAGTAGTAGTAGTT--CAATTTACTGGTATATCGTGGCCC-GTTATTTATGCCATGGTCTGATTAG
TTGCAACTGCTGTACTGATGTGTTGGGGATTGCTACCTTGAGCTCCTTGTTTCATGTTGACATTTGCACTTGTGCGAA--
-AAAAACTGAAGCAATTGCTTGCGTTCCTTTCTACAATTAGTCTTCAAACGGACCCGTTATAACAAACGTGTCTGCTATT
CCTTTTAGTGTAGTTCTCTTTACTGTGTTCCTAATGATTGTCATGTATGAATGTGTTGCAGGCATCTTGCATACCATATT
CT------------------------------------------------------------------------------
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>chrUn_1417
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------------------------GGCCTTCTTGTTTGTAGGAGCCGGAGCCGCTGGAGATCAAAGATGTGCTACGATGT
AAGTTCTAGTTTTTCCCCTTCGATTCCCTCTTCCATGCTTCTGCTCTGCTATTCCAATTTTTGCCTT-TTGTGTTCCCTC
TTTTACTAG---------------TACAGTAGTTTATTAGTACATGTATATATGGTAGCCGAAATCCACTCTTTAATACT
GATGTGCAGAGCAGTAGCAGTAGTAGTT--CAATTTACTAGTATATCGTGGCCC-ATTATTTATGTCGTGGTCTGATTAG
TTGCAACTGTTGTACTGATGTGTTGGGGATTGATTCCTTGAGCTCCTTGTTTCATGTTGACATTTGCACTTGTGCGAAAA
GAAAAACTGAAGCAATTGCTTGCGTTCCTTTCTACAATTAGTCTTCCAACAGACCAGTTATAACAAATGTGTCTGCTATT
CTTTTTAGTGTAGTTCTCTTTATTGTGTTCCTAATGATTGTCATGTATGTATGTGCTGCAGGCATCTTGCATACCATATT
CT------------------------------------------------------------------------------
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---------------------
>SNPs
-------------S----S-----------------------------------------------S------S------
----------------S----S--S---------S-S------------------S------------------------
----S-----------S------S--------S----S--S--S----S------------S-SS----S----S-----
--------S-S------------------------------------S-SSSSSSSSS-S-S------------------
---------------------------S------------S--------------S-S----------------------
---------------------S-------------------------------------------------------S--
S-------------SS---S-----------------------------------------------S---S--------
---------SS--S--------SSSSSS--------S---------------------------------S---------
----------------------------------------S----SSSSSSS-------------S-SSS----------
--------------S------------S---------------S---S--------------------------------
-------------------------------------------S-------------SSSSSS-----------------
--------------------------------------------------------------------------------
------------------------------SSSS----------------------------------------------
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-----------------------------------------------------------SSSSSSSSSSSSSSSSS----
----------------------------------S-----------------S---------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S-------------
----------SS--------------------------S----------------------------S-S----------
--------S-----------------------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------S-----------------S---------S------------------S--------
------------------------S-------------------------------------------------------
--------------S------S----------------------------------------------------------
-----------S------S-----------------------------S-------S-----------------------
---------------------------------------------------------------S-S--------------
-------------------------------------------------------S-S----------------------
--SS---------------------------------------------S------------------------------
----------------------------S---------------------------------------------------
---------------------S-----------------------------S-------------S--------------
-----SS-------------S----------------S-------S-------S--------------------------
------------S-------------------------------------S----S--S---------S-----------
-----------------------------------------------S--------------------------------
---------------------------------------------S----------------------------------
----------------------------------------------------S---------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------SS--------------------------------S-------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------S-----S-S------------------------------S--S-S---
-------------------S-------------------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS
>forward_690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCTGAAAACTCCCTCCGTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_1973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTGTTGCAGGCATCTTGCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_764
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TAATCTCCCGGCCTGTCAGT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_2686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGCCACTCTGGACTCGTAGG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_2646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TTTCATGGCTCCTC
GCTAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_3815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCAAACCGGTGTACCAAACC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
