Multiple sequence alignment - TraesCS2A01G489300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G489300 chr2A 100.000 2798 0 0 1 2798 723224990 723227787 0.000000e+00 5168.0
1 TraesCS2A01G489300 chr2A 95.565 992 24 8 876 1850 723236873 723237861 0.000000e+00 1570.0
2 TraesCS2A01G489300 chr2A 90.251 677 47 3 1 677 723234828 723235485 0.000000e+00 867.0
3 TraesCS2A01G489300 chr2A 85.864 191 12 4 675 865 723236637 723236812 3.680000e-44 189.0
4 TraesCS2A01G489300 chr4B 90.659 1017 51 14 870 1849 167586993 167588002 0.000000e+00 1312.0
5 TraesCS2A01G489300 chr4B 80.085 472 36 28 408 855 167586491 167586928 5.860000e-77 298.0
6 TraesCS2A01G489300 chr4B 96.296 54 2 0 1 54 167586253 167586306 3.840000e-14 89.8
7 TraesCS2A01G489300 chr4D 91.064 996 50 16 889 1849 109073447 109072456 0.000000e+00 1310.0
8 TraesCS2A01G489300 chr4D 84.375 192 18 4 1 187 109074199 109074015 7.960000e-41 178.0
9 TraesCS2A01G489300 chr4D 84.043 188 13 8 680 865 109073674 109073502 6.200000e-37 165.0
10 TraesCS2A01G489300 chrUn 90.225 1023 57 17 870 1857 47068973 47067959 0.000000e+00 1295.0
11 TraesCS2A01G489300 chrUn 90.364 1017 55 17 870 1851 288708547 288709555 0.000000e+00 1295.0
12 TraesCS2A01G489300 chrUn 79.024 410 65 16 1899 2305 225568926 225568535 7.690000e-66 261.0
13 TraesCS2A01G489300 chrUn 79.115 407 64 16 1899 2302 237455444 237455832 7.690000e-66 261.0
14 TraesCS2A01G489300 chrUn 79.115 407 64 16 1899 2302 257667160 257667548 7.690000e-66 261.0
15 TraesCS2A01G489300 chrUn 84.120 233 18 10 605 836 47069273 47069059 1.020000e-49 207.0
16 TraesCS2A01G489300 chrUn 84.120 233 18 10 605 836 288708247 288708461 1.020000e-49 207.0
17 TraesCS2A01G489300 chrUn 87.611 113 6 6 1 107 47069490 47069380 1.050000e-24 124.0
18 TraesCS2A01G489300 chrUn 87.611 113 6 6 1 107 288708030 288708140 1.050000e-24 124.0
19 TraesCS2A01G489300 chr5A 79.528 635 97 20 1187 1797 313314143 313314768 3.330000e-114 422.0
20 TraesCS2A01G489300 chr5A 100.000 30 0 0 2768 2797 552223552 552223581 3.890000e-04 56.5
21 TraesCS2A01G489300 chr5B 77.608 719 120 30 1110 1797 263221008 263221716 5.620000e-107 398.0
22 TraesCS2A01G489300 chr5B 81.132 212 24 5 186 395 13421442 13421245 3.730000e-34 156.0
23 TraesCS2A01G489300 chr5D 77.433 709 112 26 1128 1797 240502912 240502213 2.030000e-101 379.0
24 TraesCS2A01G489300 chr7D 87.859 313 29 6 1854 2165 529434722 529435026 2.650000e-95 359.0
25 TraesCS2A01G489300 chr6D 76.731 520 81 17 1850 2363 24825630 24826115 1.290000e-63 254.0
26 TraesCS2A01G489300 chr3D 88.095 84 9 1 2714 2797 355626069 355625987 6.380000e-17 99.0
27 TraesCS2A01G489300 chr3A 86.905 84 10 1 2714 2797 474430973 474430891 2.970000e-15 93.5
28 TraesCS2A01G489300 chr3B 88.710 62 2 3 2734 2795 732878736 732878680 1.390000e-08 71.3
29 TraesCS2A01G489300 chr6B 87.273 55 3 3 2743 2797 476107163 476107213 3.010000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G489300 chr2A 723224990 723227787 2797 False 5168.000000 5168 100.000000 1 2798 1 chr2A.!!$F1 2797
1 TraesCS2A01G489300 chr2A 723234828 723237861 3033 False 875.333333 1570 90.560000 1 1850 3 chr2A.!!$F2 1849
2 TraesCS2A01G489300 chr4B 167586253 167588002 1749 False 566.600000 1312 89.013333 1 1849 3 chr4B.!!$F1 1848
3 TraesCS2A01G489300 chr4D 109072456 109074199 1743 True 551.000000 1310 86.494000 1 1849 3 chr4D.!!$R1 1848
4 TraesCS2A01G489300 chrUn 47067959 47069490 1531 True 542.000000 1295 87.318667 1 1857 3 chrUn.!!$R2 1856
5 TraesCS2A01G489300 chrUn 288708030 288709555 1525 False 542.000000 1295 87.365000 1 1851 3 chrUn.!!$F3 1850
6 TraesCS2A01G489300 chr5A 313314143 313314768 625 False 422.000000 422 79.528000 1187 1797 1 chr5A.!!$F1 610
7 TraesCS2A01G489300 chr5B 263221008 263221716 708 False 398.000000 398 77.608000 1110 1797 1 chr5B.!!$F1 687
8 TraesCS2A01G489300 chr5D 240502213 240502912 699 True 379.000000 379 77.433000 1128 1797 1 chr5D.!!$R1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
777 2073 0.039888 AAACGAAATCAAACGGCGGG 60.04 50.0 13.24 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2397 3837 0.035458 GTGAGGTCAACCCTGTCAGG 59.965 60.0 12.4 12.4 46.51 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 91 5.087923 TCCTACTTTCATAGATGCCCCTA 57.912 43.478 0.00 0.00 0.00 3.53
67 104 1.148027 TGCCCCTATTGGTTTGGAACA 59.852 47.619 0.00 0.00 0.00 3.18
126 163 5.037385 CGTACATTGCCTATGGATCTATCG 58.963 45.833 0.00 0.00 38.64 2.92
151 196 5.071250 AGTCATAGTCAAGGTGGTTGTGTTA 59.929 40.000 0.00 0.00 37.43 2.41
165 210 4.217550 GGTTGTGTTACCTTGTGTATGCAT 59.782 41.667 3.79 3.79 35.23 3.96
182 227 6.491062 TGTATGCATAAAAATCCTCATCTGGG 59.509 38.462 8.28 0.00 0.00 4.45
281 326 2.812011 GTTGGTTATCGAGTTGCCTTGT 59.188 45.455 0.00 0.00 0.00 3.16
290 335 4.933330 TCGAGTTGCCTTGTATATCTCAC 58.067 43.478 0.00 0.00 0.00 3.51
294 339 5.423015 AGTTGCCTTGTATATCTCACACAG 58.577 41.667 0.00 0.00 0.00 3.66
311 356 5.048782 TCACACAGAGTTGCCAATAATTGAC 60.049 40.000 0.00 0.00 0.00 3.18
357 402 2.605030 GCAATGCCAACATTTCGCTAA 58.395 42.857 0.00 0.00 44.21 3.09
371 416 9.507280 AACATTTCGCTAATCAAATATTGACAG 57.493 29.630 0.00 0.00 43.48 3.51
458 511 3.394674 TTGCAAGACAAGACGATACCA 57.605 42.857 0.00 0.00 33.24 3.25
464 534 0.456221 ACAAGACGATACCAGGAGCG 59.544 55.000 0.00 0.00 0.00 5.03
471 541 1.249407 GATACCAGGAGCGGAGTAGG 58.751 60.000 0.00 0.00 0.00 3.18
512 583 8.656849 GTGTACACTTGAGATATTCGTTCATTT 58.343 33.333 18.92 0.00 0.00 2.32
513 584 8.655970 TGTACACTTGAGATATTCGTTCATTTG 58.344 33.333 0.00 0.00 0.00 2.32
530 601 4.455533 TCATTTGTTCCACAGAAGAATCGG 59.544 41.667 0.00 0.00 35.40 4.18
549 620 2.258013 TTTGCTTCTGGAACCGCGG 61.258 57.895 26.86 26.86 0.00 6.46
616 705 3.057946 AGTTAACCCGTACGTGTTCTCTC 60.058 47.826 19.33 8.75 0.00 3.20
646 739 1.487231 CACGACGACTTGCTTTCGG 59.513 57.895 0.00 0.00 40.92 4.30
716 2011 5.558888 CGATTAAATGGCGCGAGTTTTATAC 59.441 40.000 12.10 6.23 0.00 1.47
777 2073 0.039888 AAACGAAATCAAACGGCGGG 60.040 50.000 13.24 0.00 0.00 6.13
778 2074 2.202427 CGAAATCAAACGGCGGGC 60.202 61.111 13.24 0.00 0.00 6.13
779 2075 2.202427 GAAATCAAACGGCGGGCG 60.202 61.111 23.00 23.00 0.00 6.13
780 2076 3.677099 GAAATCAAACGGCGGGCGG 62.677 63.158 27.66 10.51 0.00 6.13
801 2098 1.867919 AACTCCGACTCACAGCCTCG 61.868 60.000 0.00 0.00 0.00 4.63
802 2099 2.282251 TCCGACTCACAGCCTCGT 60.282 61.111 0.00 0.00 0.00 4.18
803 2100 2.179517 CCGACTCACAGCCTCGTC 59.820 66.667 0.00 0.00 0.00 4.20
804 2101 2.336478 CCGACTCACAGCCTCGTCT 61.336 63.158 0.00 0.00 0.00 4.18
805 2102 1.154131 CGACTCACAGCCTCGTCTG 60.154 63.158 0.00 0.00 39.86 3.51
840 2137 2.221055 AGCAGCACGAAAAAGAAGTACG 59.779 45.455 0.00 0.00 0.00 3.67
841 2138 2.033151 GCAGCACGAAAAAGAAGTACGT 60.033 45.455 0.00 0.00 37.68 3.57
865 2174 0.107410 AGGTTTGAACAGCGTGTGGA 60.107 50.000 0.00 0.00 0.00 4.02
867 2176 0.307760 GTTTGAACAGCGTGTGGAGG 59.692 55.000 0.00 0.00 0.00 4.30
868 2177 0.107410 TTTGAACAGCGTGTGGAGGT 60.107 50.000 0.00 0.00 0.00 3.85
891 2254 9.523168 AGGTCTCCAGTCTATACATAATAAGAC 57.477 37.037 0.00 0.00 0.00 3.01
896 2259 7.453752 TCCAGTCTATACATAATAAGACCCCAC 59.546 40.741 0.00 0.00 0.00 4.61
902 2265 4.567857 ACATAATAAGACCCCACCTAGCT 58.432 43.478 0.00 0.00 0.00 3.32
904 2267 1.132500 ATAAGACCCCACCTAGCTGC 58.868 55.000 0.00 0.00 0.00 5.25
905 2268 0.042731 TAAGACCCCACCTAGCTGCT 59.957 55.000 7.57 7.57 0.00 4.24
925 2288 1.980765 TCTCATCAGCCCACACTCTTT 59.019 47.619 0.00 0.00 0.00 2.52
969 2346 2.004120 TCACACACCCAACCCACCT 61.004 57.895 0.00 0.00 0.00 4.00
1071 2456 2.338620 CCGCCGACTGACAACAGA 59.661 61.111 0.00 0.00 46.03 3.41
1303 2715 4.549516 GCGCCGTCTACCTCGTCC 62.550 72.222 0.00 0.00 0.00 4.79
1311 2723 3.717924 CTACCTCGTCCTCCGCCCT 62.718 68.421 0.00 0.00 36.19 5.19
1335 2747 2.283529 GCCCTCCTTCTCCGTCACA 61.284 63.158 0.00 0.00 0.00 3.58
1854 3294 6.723298 ATCTTTGATAAGATCACGGAGTCT 57.277 37.500 0.00 0.00 45.82 3.24
1857 3297 8.063200 TCTTTGATAAGATCACGGAGTCTAAA 57.937 34.615 0.00 0.00 39.39 1.85
1858 3298 8.528643 TCTTTGATAAGATCACGGAGTCTAAAA 58.471 33.333 0.00 0.00 39.39 1.52
1859 3299 9.151471 CTTTGATAAGATCACGGAGTCTAAAAA 57.849 33.333 0.00 0.00 39.39 1.94
1860 3300 8.475331 TTGATAAGATCACGGAGTCTAAAAAC 57.525 34.615 0.00 0.00 41.61 2.43
1861 3301 7.039882 TGATAAGATCACGGAGTCTAAAAACC 58.960 38.462 0.00 0.00 41.61 3.27
1862 3302 4.203654 AGATCACGGAGTCTAAAAACCC 57.796 45.455 0.00 0.00 41.61 4.11
1863 3303 2.443887 TCACGGAGTCTAAAAACCCG 57.556 50.000 0.00 0.00 41.61 5.28
1864 3304 1.962807 TCACGGAGTCTAAAAACCCGA 59.037 47.619 0.00 0.00 41.61 5.14
1865 3305 2.064014 CACGGAGTCTAAAAACCCGAC 58.936 52.381 0.00 0.00 41.61 4.79
1866 3306 1.001293 ACGGAGTCTAAAAACCCGACC 59.999 52.381 0.00 0.00 42.49 4.79
1867 3307 1.718396 GGAGTCTAAAAACCCGACCG 58.282 55.000 0.00 0.00 0.00 4.79
1868 3308 1.273327 GGAGTCTAAAAACCCGACCGA 59.727 52.381 0.00 0.00 0.00 4.69
1869 3309 2.603953 GAGTCTAAAAACCCGACCGAG 58.396 52.381 0.00 0.00 0.00 4.63
1870 3310 2.229784 GAGTCTAAAAACCCGACCGAGA 59.770 50.000 0.00 0.00 0.00 4.04
1871 3311 2.830321 AGTCTAAAAACCCGACCGAGAT 59.170 45.455 0.00 0.00 0.00 2.75
1872 3312 4.019174 AGTCTAAAAACCCGACCGAGATA 58.981 43.478 0.00 0.00 0.00 1.98
1873 3313 4.097589 AGTCTAAAAACCCGACCGAGATAG 59.902 45.833 0.00 0.00 0.00 2.08
1874 3314 2.019948 AAAAACCCGACCGAGATAGC 57.980 50.000 0.00 0.00 0.00 2.97
1875 3315 0.177373 AAAACCCGACCGAGATAGCC 59.823 55.000 0.00 0.00 0.00 3.93
1876 3316 0.686769 AAACCCGACCGAGATAGCCT 60.687 55.000 0.00 0.00 0.00 4.58
1877 3317 0.184451 AACCCGACCGAGATAGCCTA 59.816 55.000 0.00 0.00 0.00 3.93
1878 3318 0.536915 ACCCGACCGAGATAGCCTAC 60.537 60.000 0.00 0.00 0.00 3.18
1879 3319 0.250814 CCCGACCGAGATAGCCTACT 60.251 60.000 0.00 0.00 0.00 2.57
1880 3320 1.002888 CCCGACCGAGATAGCCTACTA 59.997 57.143 0.00 0.00 0.00 1.82
1881 3321 2.075338 CCGACCGAGATAGCCTACTAC 58.925 57.143 0.00 0.00 0.00 2.73
1882 3322 2.289569 CCGACCGAGATAGCCTACTACT 60.290 54.545 0.00 0.00 0.00 2.57
1883 3323 2.995258 CGACCGAGATAGCCTACTACTC 59.005 54.545 0.00 0.00 0.00 2.59
1884 3324 3.306225 CGACCGAGATAGCCTACTACTCT 60.306 52.174 0.00 0.00 30.58 3.24
1885 3325 4.248058 GACCGAGATAGCCTACTACTCTC 58.752 52.174 0.00 0.00 33.84 3.20
1886 3326 3.647113 ACCGAGATAGCCTACTACTCTCA 59.353 47.826 2.08 0.00 35.24 3.27
1887 3327 3.998341 CCGAGATAGCCTACTACTCTCAC 59.002 52.174 2.08 0.00 35.24 3.51
1888 3328 4.503469 CCGAGATAGCCTACTACTCTCACA 60.503 50.000 2.08 0.00 35.24 3.58
1889 3329 4.688879 CGAGATAGCCTACTACTCTCACAG 59.311 50.000 2.08 0.00 35.24 3.66
1890 3330 5.510009 CGAGATAGCCTACTACTCTCACAGA 60.510 48.000 2.08 0.00 35.24 3.41
1891 3331 5.617252 AGATAGCCTACTACTCTCACAGAC 58.383 45.833 0.00 0.00 0.00 3.51
1892 3332 3.722908 AGCCTACTACTCTCACAGACA 57.277 47.619 0.00 0.00 0.00 3.41
1893 3333 4.035612 AGCCTACTACTCTCACAGACAA 57.964 45.455 0.00 0.00 0.00 3.18
1894 3334 4.013728 AGCCTACTACTCTCACAGACAAG 58.986 47.826 0.00 0.00 0.00 3.16
1895 3335 4.011023 GCCTACTACTCTCACAGACAAGA 58.989 47.826 0.00 0.00 0.00 3.02
1896 3336 4.095782 GCCTACTACTCTCACAGACAAGAG 59.904 50.000 0.00 0.00 43.78 2.85
1902 3342 3.397482 CTCTCACAGACAAGAGTTTGGG 58.603 50.000 0.00 0.00 38.66 4.12
1903 3343 1.876156 CTCACAGACAAGAGTTTGGGC 59.124 52.381 0.00 0.00 38.66 5.36
1904 3344 0.954452 CACAGACAAGAGTTTGGGCC 59.046 55.000 0.00 0.00 38.66 5.80
1905 3345 0.535102 ACAGACAAGAGTTTGGGCCG 60.535 55.000 0.00 0.00 38.66 6.13
1906 3346 1.073199 AGACAAGAGTTTGGGCCGG 59.927 57.895 0.00 0.00 38.66 6.13
1907 3347 2.597510 ACAAGAGTTTGGGCCGGC 60.598 61.111 21.18 21.18 38.66 6.13
1908 3348 3.373565 CAAGAGTTTGGGCCGGCC 61.374 66.667 38.57 38.57 0.00 6.13
1918 3358 3.172825 GGCCGGCCCCCTATAACA 61.173 66.667 36.64 0.00 0.00 2.41
1919 3359 2.759292 GGCCGGCCCCCTATAACAA 61.759 63.158 36.64 0.00 0.00 2.83
1920 3360 1.227946 GCCGGCCCCCTATAACAAA 59.772 57.895 18.11 0.00 0.00 2.83
1921 3361 0.822121 GCCGGCCCCCTATAACAAAG 60.822 60.000 18.11 0.00 0.00 2.77
1922 3362 0.822121 CCGGCCCCCTATAACAAAGC 60.822 60.000 0.00 0.00 0.00 3.51
1923 3363 0.106918 CGGCCCCCTATAACAAAGCA 60.107 55.000 0.00 0.00 0.00 3.91
1924 3364 1.683629 CGGCCCCCTATAACAAAGCAA 60.684 52.381 0.00 0.00 0.00 3.91
1925 3365 2.031870 GGCCCCCTATAACAAAGCAAG 58.968 52.381 0.00 0.00 0.00 4.01
1926 3366 2.357777 GGCCCCCTATAACAAAGCAAGA 60.358 50.000 0.00 0.00 0.00 3.02
1927 3367 3.361786 GCCCCCTATAACAAAGCAAGAA 58.638 45.455 0.00 0.00 0.00 2.52
1928 3368 3.960755 GCCCCCTATAACAAAGCAAGAAT 59.039 43.478 0.00 0.00 0.00 2.40
1929 3369 4.405680 GCCCCCTATAACAAAGCAAGAATT 59.594 41.667 0.00 0.00 0.00 2.17
1930 3370 5.451937 GCCCCCTATAACAAAGCAAGAATTC 60.452 44.000 0.00 0.00 0.00 2.17
1931 3371 5.221048 CCCCCTATAACAAAGCAAGAATTCG 60.221 44.000 0.00 0.00 0.00 3.34
1932 3372 5.357032 CCCCTATAACAAAGCAAGAATTCGT 59.643 40.000 0.00 0.00 0.00 3.85
1933 3373 6.258160 CCCTATAACAAAGCAAGAATTCGTG 58.742 40.000 16.00 16.00 0.00 4.35
1934 3374 6.093495 CCCTATAACAAAGCAAGAATTCGTGA 59.907 38.462 23.23 2.71 0.00 4.35
1935 3375 7.182761 CCTATAACAAAGCAAGAATTCGTGAG 58.817 38.462 23.23 12.14 0.00 3.51
1936 3376 3.904136 ACAAAGCAAGAATTCGTGAGG 57.096 42.857 23.23 11.55 0.00 3.86
1937 3377 3.214328 ACAAAGCAAGAATTCGTGAGGT 58.786 40.909 23.23 12.10 0.00 3.85
1938 3378 3.251004 ACAAAGCAAGAATTCGTGAGGTC 59.749 43.478 23.23 7.03 0.00 3.85
1939 3379 3.409026 AAGCAAGAATTCGTGAGGTCT 57.591 42.857 23.23 9.06 0.00 3.85
1940 3380 4.537135 AAGCAAGAATTCGTGAGGTCTA 57.463 40.909 23.23 0.00 0.00 2.59
1941 3381 4.537135 AGCAAGAATTCGTGAGGTCTAA 57.463 40.909 23.23 0.00 0.00 2.10
1942 3382 4.894784 AGCAAGAATTCGTGAGGTCTAAA 58.105 39.130 23.23 0.00 0.00 1.85
1943 3383 5.305585 AGCAAGAATTCGTGAGGTCTAAAA 58.694 37.500 23.23 0.00 0.00 1.52
1944 3384 5.763204 AGCAAGAATTCGTGAGGTCTAAAAA 59.237 36.000 23.23 0.00 0.00 1.94
1965 3405 7.961325 AAAAATGTCCGTGCATTTCTAAAAT 57.039 28.000 12.67 0.00 45.17 1.82
1966 3406 7.961325 AAAATGTCCGTGCATTTCTAAAATT 57.039 28.000 12.67 0.00 45.17 1.82
1967 3407 6.949578 AATGTCCGTGCATTTCTAAAATTG 57.050 33.333 0.00 0.00 35.76 2.32
1968 3408 5.446143 TGTCCGTGCATTTCTAAAATTGT 57.554 34.783 0.00 0.00 0.00 2.71
1969 3409 5.457140 TGTCCGTGCATTTCTAAAATTGTC 58.543 37.500 0.00 0.00 0.00 3.18
1970 3410 4.857037 GTCCGTGCATTTCTAAAATTGTCC 59.143 41.667 0.00 0.00 0.00 4.02
1971 3411 4.520874 TCCGTGCATTTCTAAAATTGTCCA 59.479 37.500 0.00 0.00 0.00 4.02
1972 3412 5.010112 TCCGTGCATTTCTAAAATTGTCCAA 59.990 36.000 0.00 0.00 0.00 3.53
1973 3413 5.694006 CCGTGCATTTCTAAAATTGTCCAAA 59.306 36.000 0.00 0.00 0.00 3.28
1974 3414 6.201806 CCGTGCATTTCTAAAATTGTCCAAAA 59.798 34.615 0.00 0.00 0.00 2.44
1975 3415 7.282916 CGTGCATTTCTAAAATTGTCCAAAAG 58.717 34.615 0.00 0.00 0.00 2.27
1976 3416 7.042791 CGTGCATTTCTAAAATTGTCCAAAAGT 60.043 33.333 0.00 0.00 0.00 2.66
1977 3417 8.611757 GTGCATTTCTAAAATTGTCCAAAAGTT 58.388 29.630 0.00 0.00 0.00 2.66
1978 3418 9.823647 TGCATTTCTAAAATTGTCCAAAAGTTA 57.176 25.926 0.00 0.00 0.00 2.24
1991 3431 8.257830 TGTCCAAAAGTTAAAACAAAATGTCC 57.742 30.769 0.00 0.00 0.00 4.02
1992 3432 8.097662 TGTCCAAAAGTTAAAACAAAATGTCCT 58.902 29.630 0.00 0.00 0.00 3.85
1993 3433 8.387354 GTCCAAAAGTTAAAACAAAATGTCCTG 58.613 33.333 0.00 0.00 0.00 3.86
1994 3434 8.097662 TCCAAAAGTTAAAACAAAATGTCCTGT 58.902 29.630 0.00 0.00 0.00 4.00
1995 3435 8.726068 CCAAAAGTTAAAACAAAATGTCCTGTT 58.274 29.630 0.00 0.00 37.36 3.16
2006 3446 9.533253 AACAAAATGTCCTGTTTTCTATTTCTG 57.467 29.630 0.00 0.00 31.76 3.02
2007 3447 8.143835 ACAAAATGTCCTGTTTTCTATTTCTGG 58.856 33.333 0.00 0.00 0.00 3.86
2008 3448 5.904362 ATGTCCTGTTTTCTATTTCTGGC 57.096 39.130 0.00 0.00 0.00 4.85
2009 3449 4.724399 TGTCCTGTTTTCTATTTCTGGCA 58.276 39.130 0.00 0.00 0.00 4.92
2010 3450 4.518970 TGTCCTGTTTTCTATTTCTGGCAC 59.481 41.667 0.00 0.00 0.00 5.01
2011 3451 4.518970 GTCCTGTTTTCTATTTCTGGCACA 59.481 41.667 0.00 0.00 0.00 4.57
2012 3452 5.009610 GTCCTGTTTTCTATTTCTGGCACAA 59.990 40.000 0.00 0.00 38.70 3.33
2013 3453 5.596361 TCCTGTTTTCTATTTCTGGCACAAA 59.404 36.000 0.00 0.00 38.70 2.83
2014 3454 6.267471 TCCTGTTTTCTATTTCTGGCACAAAT 59.733 34.615 6.01 6.01 38.70 2.32
2015 3455 6.930722 CCTGTTTTCTATTTCTGGCACAAATT 59.069 34.615 6.04 0.00 38.70 1.82
2016 3456 7.116805 CCTGTTTTCTATTTCTGGCACAAATTC 59.883 37.037 6.04 0.00 38.70 2.17
2017 3457 7.495901 TGTTTTCTATTTCTGGCACAAATTCA 58.504 30.769 6.04 0.00 38.70 2.57
2018 3458 7.984050 TGTTTTCTATTTCTGGCACAAATTCAA 59.016 29.630 6.04 0.00 38.70 2.69
2019 3459 8.992073 GTTTTCTATTTCTGGCACAAATTCAAT 58.008 29.630 6.04 0.00 38.70 2.57
2020 3460 9.558396 TTTTCTATTTCTGGCACAAATTCAATT 57.442 25.926 6.04 0.00 38.70 2.32
2021 3461 8.761575 TTCTATTTCTGGCACAAATTCAATTC 57.238 30.769 6.04 0.00 38.70 2.17
2022 3462 7.322664 TCTATTTCTGGCACAAATTCAATTCC 58.677 34.615 6.04 0.00 38.70 3.01
2023 3463 5.549742 TTTCTGGCACAAATTCAATTCCT 57.450 34.783 0.00 0.00 38.70 3.36
2024 3464 5.549742 TTCTGGCACAAATTCAATTCCTT 57.450 34.783 0.00 0.00 38.70 3.36
2025 3465 5.549742 TCTGGCACAAATTCAATTCCTTT 57.450 34.783 0.00 0.00 38.70 3.11
2026 3466 5.927819 TCTGGCACAAATTCAATTCCTTTT 58.072 33.333 0.00 0.00 38.70 2.27
2027 3467 5.759273 TCTGGCACAAATTCAATTCCTTTTG 59.241 36.000 0.00 0.00 38.70 2.44
2028 3468 5.435291 TGGCACAAATTCAATTCCTTTTGT 58.565 33.333 4.22 4.22 41.58 2.83
2034 3474 9.623350 CACAAATTCAATTCCTTTTGTGTTTTT 57.377 25.926 19.16 0.00 46.94 1.94
2035 3475 9.838975 ACAAATTCAATTCCTTTTGTGTTTTTC 57.161 25.926 7.85 0.00 39.94 2.29
2036 3476 9.837525 CAAATTCAATTCCTTTTGTGTTTTTCA 57.162 25.926 0.00 0.00 0.00 2.69
2038 3478 9.447157 AATTCAATTCCTTTTGTGTTTTTCAGA 57.553 25.926 0.00 0.00 0.00 3.27
2039 3479 8.839310 TTCAATTCCTTTTGTGTTTTTCAGAA 57.161 26.923 0.00 0.00 0.00 3.02
2040 3480 8.839310 TCAATTCCTTTTGTGTTTTTCAGAAA 57.161 26.923 0.00 0.00 37.49 2.52
2041 3481 9.277783 TCAATTCCTTTTGTGTTTTTCAGAAAA 57.722 25.926 4.06 4.06 43.62 2.29
2069 3509 9.868277 ATTTGGAATTTTGAAATACTATTCGCA 57.132 25.926 0.00 0.00 31.80 5.10
2070 3510 9.868277 TTTGGAATTTTGAAATACTATTCGCAT 57.132 25.926 0.00 0.00 31.80 4.73
2071 3511 9.868277 TTGGAATTTTGAAATACTATTCGCATT 57.132 25.926 0.00 0.00 31.80 3.56
2072 3512 9.868277 TGGAATTTTGAAATACTATTCGCATTT 57.132 25.926 0.00 0.00 31.80 2.32
2085 3525 8.211198 ACTATTCGCATTTTTAAAACTGTTCG 57.789 30.769 16.75 13.23 0.00 3.95
2086 3526 7.858879 ACTATTCGCATTTTTAAAACTGTTCGT 59.141 29.630 16.75 6.80 0.00 3.85
2087 3527 5.858159 TCGCATTTTTAAAACTGTTCGTG 57.142 34.783 16.75 1.76 0.00 4.35
2088 3528 4.735822 TCGCATTTTTAAAACTGTTCGTGG 59.264 37.500 16.75 3.94 0.00 4.94
2089 3529 4.501198 CGCATTTTTAAAACTGTTCGTGGT 59.499 37.500 16.75 0.00 0.00 4.16
2090 3530 5.004916 CGCATTTTTAAAACTGTTCGTGGTT 59.995 36.000 16.75 0.00 0.00 3.67
2091 3531 6.454450 CGCATTTTTAAAACTGTTCGTGGTTT 60.454 34.615 16.75 0.00 37.26 3.27
2092 3532 7.237871 GCATTTTTAAAACTGTTCGTGGTTTT 58.762 30.769 16.75 8.47 44.43 2.43
2093 3533 8.381387 GCATTTTTAAAACTGTTCGTGGTTTTA 58.619 29.630 16.75 0.00 42.89 1.52
2094 3534 9.678247 CATTTTTAAAACTGTTCGTGGTTTTAC 57.322 29.630 9.50 0.00 43.19 2.01
2095 3535 8.807667 TTTTTAAAACTGTTCGTGGTTTTACA 57.192 26.923 0.00 2.98 43.19 2.41
2096 3536 8.807667 TTTTAAAACTGTTCGTGGTTTTACAA 57.192 26.923 9.54 7.70 43.19 2.41
2097 3537 8.807667 TTTAAAACTGTTCGTGGTTTTACAAA 57.192 26.923 9.54 3.93 43.19 2.83
2098 3538 8.807667 TTAAAACTGTTCGTGGTTTTACAAAA 57.192 26.923 9.54 0.00 43.19 2.44
2099 3539 7.892778 AAAACTGTTCGTGGTTTTACAAAAT 57.107 28.000 0.00 0.00 41.78 1.82
2100 3540 7.514573 AAACTGTTCGTGGTTTTACAAAATC 57.485 32.000 0.00 0.00 32.60 2.17
2101 3541 6.197364 ACTGTTCGTGGTTTTACAAAATCA 57.803 33.333 0.00 0.00 36.71 2.57
2102 3542 6.622549 ACTGTTCGTGGTTTTACAAAATCAA 58.377 32.000 2.07 0.00 40.38 2.57
2103 3543 6.750039 ACTGTTCGTGGTTTTACAAAATCAAG 59.250 34.615 2.07 4.88 40.38 3.02
2104 3544 6.853720 TGTTCGTGGTTTTACAAAATCAAGA 58.146 32.000 10.87 10.87 42.75 3.02
2107 3547 8.758633 TTCGTGGTTTTACAAAATCAAGAAAA 57.241 26.923 19.74 5.64 46.63 2.29
2108 3548 8.934507 TCGTGGTTTTACAAAATCAAGAAAAT 57.065 26.923 12.07 0.00 41.95 1.82
2109 3549 9.372369 TCGTGGTTTTACAAAATCAAGAAAATT 57.628 25.926 12.07 0.00 41.95 1.82
2110 3550 9.631639 CGTGGTTTTACAAAATCAAGAAAATTC 57.368 29.630 7.57 0.00 40.38 2.17
2119 3559 9.835389 ACAAAATCAAGAAAATTCAGAATTCCA 57.165 25.926 8.90 0.00 0.00 3.53
2151 3591 7.827819 TTCACATACTATGAAGAAGGTTTCG 57.172 36.000 2.90 0.00 32.34 3.46
2152 3592 6.338146 TCACATACTATGAAGAAGGTTTCGG 58.662 40.000 2.90 0.00 34.02 4.30
2153 3593 6.153851 TCACATACTATGAAGAAGGTTTCGGA 59.846 38.462 2.90 0.00 34.02 4.55
2154 3594 6.986817 CACATACTATGAAGAAGGTTTCGGAT 59.013 38.462 2.90 0.00 34.02 4.18
2155 3595 7.495934 CACATACTATGAAGAAGGTTTCGGATT 59.504 37.037 2.90 0.00 34.02 3.01
2156 3596 8.047310 ACATACTATGAAGAAGGTTTCGGATTT 58.953 33.333 2.90 0.00 34.02 2.17
2157 3597 8.893727 CATACTATGAAGAAGGTTTCGGATTTT 58.106 33.333 0.00 0.00 34.02 1.82
2158 3598 7.379098 ACTATGAAGAAGGTTTCGGATTTTC 57.621 36.000 0.00 0.00 34.02 2.29
2159 3599 6.940298 ACTATGAAGAAGGTTTCGGATTTTCA 59.060 34.615 0.00 0.00 34.02 2.69
2160 3600 6.648879 ATGAAGAAGGTTTCGGATTTTCAA 57.351 33.333 0.00 0.00 34.02 2.69
2161 3601 6.458232 TGAAGAAGGTTTCGGATTTTCAAA 57.542 33.333 0.00 0.00 34.02 2.69
2162 3602 6.868622 TGAAGAAGGTTTCGGATTTTCAAAA 58.131 32.000 0.00 0.00 34.02 2.44
2163 3603 7.496747 TGAAGAAGGTTTCGGATTTTCAAAAT 58.503 30.769 0.00 0.00 34.02 1.82
2164 3604 7.984617 TGAAGAAGGTTTCGGATTTTCAAAATT 59.015 29.630 0.00 0.00 34.02 1.82
2165 3605 7.713764 AGAAGGTTTCGGATTTTCAAAATTG 57.286 32.000 0.00 0.00 34.02 2.32
2166 3606 7.272244 AGAAGGTTTCGGATTTTCAAAATTGT 58.728 30.769 0.00 0.00 34.02 2.71
2167 3607 7.438160 AGAAGGTTTCGGATTTTCAAAATTGTC 59.562 33.333 0.00 0.00 34.02 3.18
2168 3608 6.816136 AGGTTTCGGATTTTCAAAATTGTCT 58.184 32.000 0.00 0.00 0.00 3.41
2169 3609 7.272244 AGGTTTCGGATTTTCAAAATTGTCTT 58.728 30.769 0.00 0.00 0.00 3.01
2170 3610 8.417884 AGGTTTCGGATTTTCAAAATTGTCTTA 58.582 29.630 0.00 0.00 0.00 2.10
2171 3611 9.203421 GGTTTCGGATTTTCAAAATTGTCTTAT 57.797 29.630 0.00 0.00 0.00 1.73
2250 3690 4.335400 AAAATGTTTCGGATTGTTGGCT 57.665 36.364 0.00 0.00 0.00 4.75
2251 3691 3.302365 AATGTTTCGGATTGTTGGCTG 57.698 42.857 0.00 0.00 0.00 4.85
2252 3692 0.313672 TGTTTCGGATTGTTGGCTGC 59.686 50.000 0.00 0.00 0.00 5.25
2253 3693 0.729140 GTTTCGGATTGTTGGCTGCG 60.729 55.000 0.00 0.00 0.00 5.18
2254 3694 1.861542 TTTCGGATTGTTGGCTGCGG 61.862 55.000 0.00 0.00 0.00 5.69
2255 3695 2.739849 TTCGGATTGTTGGCTGCGGA 62.740 55.000 0.00 0.00 0.00 5.54
2256 3696 2.877691 GGATTGTTGGCTGCGGAC 59.122 61.111 0.00 0.00 0.00 4.79
2257 3697 1.675641 GGATTGTTGGCTGCGGACT 60.676 57.895 0.00 0.00 0.00 3.85
2258 3698 0.392461 GGATTGTTGGCTGCGGACTA 60.392 55.000 0.00 0.00 0.00 2.59
2259 3699 1.009829 GATTGTTGGCTGCGGACTAG 58.990 55.000 0.00 0.00 0.00 2.57
2260 3700 0.613260 ATTGTTGGCTGCGGACTAGA 59.387 50.000 0.00 0.00 0.00 2.43
2261 3701 0.320421 TTGTTGGCTGCGGACTAGAC 60.320 55.000 0.00 0.00 0.00 2.59
2262 3702 1.185618 TGTTGGCTGCGGACTAGACT 61.186 55.000 0.00 0.00 0.00 3.24
2263 3703 0.737715 GTTGGCTGCGGACTAGACTG 60.738 60.000 0.00 0.00 0.00 3.51
2264 3704 1.888436 TTGGCTGCGGACTAGACTGG 61.888 60.000 0.00 0.00 0.00 4.00
2265 3705 2.496817 GCTGCGGACTAGACTGGG 59.503 66.667 0.00 0.00 0.00 4.45
2266 3706 2.496817 CTGCGGACTAGACTGGGC 59.503 66.667 0.00 0.00 0.00 5.36
2267 3707 3.075005 TGCGGACTAGACTGGGCC 61.075 66.667 0.00 0.00 0.00 5.80
2268 3708 4.208686 GCGGACTAGACTGGGCCG 62.209 72.222 27.68 27.68 44.47 6.13
2269 3709 4.208686 CGGACTAGACTGGGCCGC 62.209 72.222 21.15 0.00 35.17 6.53
2270 3710 3.851128 GGACTAGACTGGGCCGCC 61.851 72.222 0.00 0.00 0.00 6.13
2271 3711 3.851128 GACTAGACTGGGCCGCCC 61.851 72.222 22.81 22.81 45.71 6.13
2281 3721 3.570212 GGCCGCCCCACCAGATAT 61.570 66.667 0.00 0.00 0.00 1.63
2282 3722 2.281761 GCCGCCCCACCAGATATG 60.282 66.667 0.00 0.00 0.00 1.78
2283 3723 2.818169 GCCGCCCCACCAGATATGA 61.818 63.158 0.00 0.00 0.00 2.15
2284 3724 1.836391 CCGCCCCACCAGATATGAA 59.164 57.895 0.00 0.00 0.00 2.57
2285 3725 0.250467 CCGCCCCACCAGATATGAAG 60.250 60.000 0.00 0.00 0.00 3.02
2286 3726 0.886490 CGCCCCACCAGATATGAAGC 60.886 60.000 0.00 0.00 0.00 3.86
2287 3727 0.886490 GCCCCACCAGATATGAAGCG 60.886 60.000 0.00 0.00 0.00 4.68
2288 3728 0.758734 CCCCACCAGATATGAAGCGA 59.241 55.000 0.00 0.00 0.00 4.93
2289 3729 1.270518 CCCCACCAGATATGAAGCGAG 60.271 57.143 0.00 0.00 0.00 5.03
2290 3730 1.414181 CCCACCAGATATGAAGCGAGT 59.586 52.381 0.00 0.00 0.00 4.18
2291 3731 2.158900 CCCACCAGATATGAAGCGAGTT 60.159 50.000 0.00 0.00 0.00 3.01
2292 3732 3.535561 CCACCAGATATGAAGCGAGTTT 58.464 45.455 0.00 0.00 0.00 2.66
2293 3733 3.941483 CCACCAGATATGAAGCGAGTTTT 59.059 43.478 0.00 0.00 0.00 2.43
2294 3734 4.396166 CCACCAGATATGAAGCGAGTTTTT 59.604 41.667 0.00 0.00 0.00 1.94
2332 3772 9.965824 ACATGACGTGAAAATTATTTCTTTCTT 57.034 25.926 0.00 0.00 44.32 2.52
2348 3788 7.908193 TTCTTTCTTTTCTTTAATGCACGAC 57.092 32.000 0.00 0.00 0.00 4.34
2349 3789 6.133392 TCTTTCTTTTCTTTAATGCACGACG 58.867 36.000 0.00 0.00 0.00 5.12
2350 3790 5.412526 TTCTTTTCTTTAATGCACGACGT 57.587 34.783 0.00 0.00 0.00 4.34
2351 3791 6.528014 TTCTTTTCTTTAATGCACGACGTA 57.472 33.333 0.00 0.00 0.00 3.57
2352 3792 6.528014 TCTTTTCTTTAATGCACGACGTAA 57.472 33.333 0.00 0.00 0.00 3.18
2353 3793 7.124347 TCTTTTCTTTAATGCACGACGTAAT 57.876 32.000 0.00 0.00 0.00 1.89
2354 3794 8.242085 TCTTTTCTTTAATGCACGACGTAATA 57.758 30.769 0.00 0.00 0.00 0.98
2355 3795 8.710551 TCTTTTCTTTAATGCACGACGTAATAA 58.289 29.630 0.00 0.00 0.00 1.40
2356 3796 9.485591 CTTTTCTTTAATGCACGACGTAATAAT 57.514 29.630 0.00 0.00 0.00 1.28
2357 3797 9.828852 TTTTCTTTAATGCACGACGTAATAATT 57.171 25.926 0.00 1.29 0.00 1.40
2358 3798 9.480538 TTTCTTTAATGCACGACGTAATAATTC 57.519 29.630 0.00 0.00 0.00 2.17
2359 3799 7.331792 TCTTTAATGCACGACGTAATAATTCG 58.668 34.615 0.00 0.00 38.73 3.34
2360 3800 6.809297 TTAATGCACGACGTAATAATTCGA 57.191 33.333 0.00 0.00 36.58 3.71
2361 3801 5.705813 AATGCACGACGTAATAATTCGAA 57.294 34.783 0.00 0.00 36.58 3.71
2362 3802 5.705813 ATGCACGACGTAATAATTCGAAA 57.294 34.783 0.00 0.00 36.58 3.46
2363 3803 5.512573 TGCACGACGTAATAATTCGAAAA 57.487 34.783 0.00 0.00 36.58 2.29
2364 3804 5.543716 TGCACGACGTAATAATTCGAAAAG 58.456 37.500 0.00 0.00 36.58 2.27
2365 3805 5.118971 TGCACGACGTAATAATTCGAAAAGT 59.881 36.000 0.00 0.00 36.58 2.66
2366 3806 6.307558 TGCACGACGTAATAATTCGAAAAGTA 59.692 34.615 0.00 0.00 36.58 2.24
2367 3807 7.148836 TGCACGACGTAATAATTCGAAAAGTAA 60.149 33.333 0.00 0.00 36.58 2.24
2368 3808 7.683676 GCACGACGTAATAATTCGAAAAGTAAA 59.316 33.333 0.00 0.00 36.58 2.01
2369 3809 9.514822 CACGACGTAATAATTCGAAAAGTAAAA 57.485 29.630 0.00 0.00 36.58 1.52
2370 3810 9.516091 ACGACGTAATAATTCGAAAAGTAAAAC 57.484 29.630 0.00 0.00 36.58 2.43
2371 3811 9.514822 CGACGTAATAATTCGAAAAGTAAAACA 57.485 29.630 0.00 0.00 34.62 2.83
2380 3820 9.840427 AATTCGAAAAGTAAAACATCTACCATG 57.160 29.630 0.00 0.00 0.00 3.66
2381 3821 7.972832 TCGAAAAGTAAAACATCTACCATGT 57.027 32.000 0.00 0.00 0.00 3.21
2382 3822 9.491675 TTCGAAAAGTAAAACATCTACCATGTA 57.508 29.630 0.00 0.00 0.00 2.29
2383 3823 9.146984 TCGAAAAGTAAAACATCTACCATGTAG 57.853 33.333 0.00 0.00 0.00 2.74
2384 3824 8.932791 CGAAAAGTAAAACATCTACCATGTAGT 58.067 33.333 1.54 0.00 0.00 2.73
2386 3826 8.475331 AAAGTAAAACATCTACCATGTAGTCG 57.525 34.615 1.54 0.00 0.00 4.18
2387 3827 7.400599 AGTAAAACATCTACCATGTAGTCGA 57.599 36.000 1.54 0.00 0.00 4.20
2388 3828 7.833786 AGTAAAACATCTACCATGTAGTCGAA 58.166 34.615 0.00 0.00 0.00 3.71
2389 3829 6.963049 AAAACATCTACCATGTAGTCGAAC 57.037 37.500 0.00 0.00 0.00 3.95
2390 3830 5.916661 AACATCTACCATGTAGTCGAACT 57.083 39.130 0.00 0.00 0.00 3.01
2391 3831 5.916661 ACATCTACCATGTAGTCGAACTT 57.083 39.130 0.00 0.00 0.00 2.66
2392 3832 5.892568 ACATCTACCATGTAGTCGAACTTC 58.107 41.667 0.00 0.00 0.00 3.01
2393 3833 4.611310 TCTACCATGTAGTCGAACTTCG 57.389 45.455 4.72 4.72 42.10 3.79
2394 3834 2.649331 ACCATGTAGTCGAACTTCGG 57.351 50.000 11.21 0.00 40.88 4.30
2395 3835 1.203994 ACCATGTAGTCGAACTTCGGG 59.796 52.381 11.21 5.28 40.88 5.14
2396 3836 1.475280 CCATGTAGTCGAACTTCGGGA 59.525 52.381 11.21 0.00 40.88 5.14
2397 3837 2.527100 CATGTAGTCGAACTTCGGGAC 58.473 52.381 11.21 3.40 40.88 4.46
2398 3838 0.883833 TGTAGTCGAACTTCGGGACC 59.116 55.000 11.21 0.00 40.88 4.46
2399 3839 1.172175 GTAGTCGAACTTCGGGACCT 58.828 55.000 11.21 5.39 40.88 3.85
2400 3840 1.135460 GTAGTCGAACTTCGGGACCTG 60.135 57.143 11.21 0.00 40.88 4.00
2401 3841 0.538977 AGTCGAACTTCGGGACCTGA 60.539 55.000 11.21 0.00 40.88 3.86
2402 3842 0.388263 GTCGAACTTCGGGACCTGAC 60.388 60.000 11.21 0.00 40.88 3.51
2403 3843 0.824595 TCGAACTTCGGGACCTGACA 60.825 55.000 11.21 0.00 40.88 3.58
2404 3844 0.388649 CGAACTTCGGGACCTGACAG 60.389 60.000 1.22 6.73 36.00 3.51
2405 3845 0.037232 GAACTTCGGGACCTGACAGG 60.037 60.000 20.45 20.45 42.49 4.00
2406 3846 1.481056 AACTTCGGGACCTGACAGGG 61.481 60.000 25.34 7.76 40.58 4.45
2407 3847 1.913762 CTTCGGGACCTGACAGGGT 60.914 63.158 25.34 11.06 40.58 4.34
2408 3848 1.460689 TTCGGGACCTGACAGGGTT 60.461 57.895 25.34 5.29 40.58 4.11
2409 3849 1.764571 TTCGGGACCTGACAGGGTTG 61.765 60.000 25.34 11.94 40.58 3.77
2410 3850 2.214216 CGGGACCTGACAGGGTTGA 61.214 63.158 25.34 0.00 40.58 3.18
2411 3851 1.375326 GGGACCTGACAGGGTTGAC 59.625 63.158 25.34 9.99 40.58 3.18
2412 3852 1.375326 GGACCTGACAGGGTTGACC 59.625 63.158 25.34 15.18 40.58 4.02
2425 3865 3.010420 GGGTTGACCTCACTCAAATAGC 58.990 50.000 0.00 0.00 31.90 2.97
2426 3866 3.010420 GGTTGACCTCACTCAAATAGCC 58.990 50.000 0.00 0.00 31.90 3.93
2427 3867 3.559171 GGTTGACCTCACTCAAATAGCCA 60.559 47.826 0.00 0.00 31.90 4.75
2428 3868 3.334583 TGACCTCACTCAAATAGCCAC 57.665 47.619 0.00 0.00 0.00 5.01
2429 3869 2.906389 TGACCTCACTCAAATAGCCACT 59.094 45.455 0.00 0.00 0.00 4.00
2430 3870 4.093743 TGACCTCACTCAAATAGCCACTA 58.906 43.478 0.00 0.00 0.00 2.74
2431 3871 4.081642 TGACCTCACTCAAATAGCCACTAC 60.082 45.833 0.00 0.00 0.00 2.73
2432 3872 3.838317 ACCTCACTCAAATAGCCACTACA 59.162 43.478 0.00 0.00 0.00 2.74
2433 3873 4.184629 CCTCACTCAAATAGCCACTACAC 58.815 47.826 0.00 0.00 0.00 2.90
2434 3874 4.184629 CTCACTCAAATAGCCACTACACC 58.815 47.826 0.00 0.00 0.00 4.16
2435 3875 3.580895 TCACTCAAATAGCCACTACACCA 59.419 43.478 0.00 0.00 0.00 4.17
2436 3876 3.684788 CACTCAAATAGCCACTACACCAC 59.315 47.826 0.00 0.00 0.00 4.16
2437 3877 3.326588 ACTCAAATAGCCACTACACCACA 59.673 43.478 0.00 0.00 0.00 4.17
2438 3878 4.019321 ACTCAAATAGCCACTACACCACAT 60.019 41.667 0.00 0.00 0.00 3.21
2439 3879 4.260985 TCAAATAGCCACTACACCACATG 58.739 43.478 0.00 0.00 0.00 3.21
2440 3880 4.019771 TCAAATAGCCACTACACCACATGA 60.020 41.667 0.00 0.00 0.00 3.07
2441 3881 3.543680 ATAGCCACTACACCACATGAC 57.456 47.619 0.00 0.00 0.00 3.06
2442 3882 1.352083 AGCCACTACACCACATGACT 58.648 50.000 0.00 0.00 0.00 3.41
2443 3883 2.536066 AGCCACTACACCACATGACTA 58.464 47.619 0.00 0.00 0.00 2.59
2444 3884 3.107601 AGCCACTACACCACATGACTAT 58.892 45.455 0.00 0.00 0.00 2.12
2445 3885 3.118629 AGCCACTACACCACATGACTATG 60.119 47.826 0.00 0.00 40.24 2.23
2446 3886 3.118775 GCCACTACACCACATGACTATGA 60.119 47.826 0.00 0.00 37.73 2.15
2447 3887 4.433615 CCACTACACCACATGACTATGAC 58.566 47.826 0.00 0.00 37.73 3.06
2448 3888 4.160439 CCACTACACCACATGACTATGACT 59.840 45.833 0.00 0.00 37.73 3.41
2449 3889 5.359860 CCACTACACCACATGACTATGACTA 59.640 44.000 0.00 0.00 37.73 2.59
2450 3890 6.127451 CCACTACACCACATGACTATGACTAA 60.127 42.308 0.00 0.00 37.73 2.24
2451 3891 6.752351 CACTACACCACATGACTATGACTAAC 59.248 42.308 0.00 0.00 37.73 2.34
2452 3892 5.738619 ACACCACATGACTATGACTAACA 57.261 39.130 0.00 0.00 37.73 2.41
2453 3893 6.299805 ACACCACATGACTATGACTAACAT 57.700 37.500 0.00 0.00 42.39 2.71
2454 3894 6.711277 ACACCACATGACTATGACTAACATT 58.289 36.000 0.00 0.00 40.07 2.71
2455 3895 7.847096 ACACCACATGACTATGACTAACATTA 58.153 34.615 0.00 0.00 40.07 1.90
2456 3896 8.486210 ACACCACATGACTATGACTAACATTAT 58.514 33.333 0.00 0.00 40.07 1.28
2457 3897 8.982685 CACCACATGACTATGACTAACATTATC 58.017 37.037 0.00 0.00 40.07 1.75
2458 3898 8.704668 ACCACATGACTATGACTAACATTATCA 58.295 33.333 0.00 0.00 40.07 2.15
2459 3899 9.201127 CCACATGACTATGACTAACATTATCAG 57.799 37.037 0.00 0.00 40.07 2.90
2460 3900 9.971922 CACATGACTATGACTAACATTATCAGA 57.028 33.333 0.00 0.00 40.07 3.27
2462 3902 9.636879 CATGACTATGACTAACATTATCAGAGG 57.363 37.037 0.00 0.00 36.28 3.69
2463 3903 7.661968 TGACTATGACTAACATTATCAGAGGC 58.338 38.462 0.00 0.00 39.65 4.70
2464 3904 6.998802 ACTATGACTAACATTATCAGAGGCC 58.001 40.000 0.00 0.00 36.28 5.19
2465 3905 4.689612 TGACTAACATTATCAGAGGCCC 57.310 45.455 0.00 0.00 0.00 5.80
2466 3906 3.069586 TGACTAACATTATCAGAGGCCCG 59.930 47.826 0.00 0.00 0.00 6.13
2467 3907 3.305720 ACTAACATTATCAGAGGCCCGA 58.694 45.455 0.00 0.00 0.00 5.14
2468 3908 3.709653 ACTAACATTATCAGAGGCCCGAA 59.290 43.478 0.00 0.00 0.00 4.30
2469 3909 2.622064 ACATTATCAGAGGCCCGAAC 57.378 50.000 0.00 0.00 0.00 3.95
2470 3910 2.119495 ACATTATCAGAGGCCCGAACT 58.881 47.619 0.00 0.00 0.00 3.01
2471 3911 3.305720 ACATTATCAGAGGCCCGAACTA 58.694 45.455 0.00 0.00 0.00 2.24
2472 3912 3.904339 ACATTATCAGAGGCCCGAACTAT 59.096 43.478 0.00 0.00 0.00 2.12
2473 3913 4.348168 ACATTATCAGAGGCCCGAACTATT 59.652 41.667 0.00 0.00 0.00 1.73
2474 3914 5.163195 ACATTATCAGAGGCCCGAACTATTT 60.163 40.000 0.00 0.00 0.00 1.40
2475 3915 6.042781 ACATTATCAGAGGCCCGAACTATTTA 59.957 38.462 0.00 0.00 0.00 1.40
2476 3916 4.608948 ATCAGAGGCCCGAACTATTTAG 57.391 45.455 0.00 0.00 0.00 1.85
2477 3917 3.371965 TCAGAGGCCCGAACTATTTAGT 58.628 45.455 0.00 0.00 38.39 2.24
2478 3918 3.383825 TCAGAGGCCCGAACTATTTAGTC 59.616 47.826 0.00 0.00 34.99 2.59
2479 3919 3.132289 CAGAGGCCCGAACTATTTAGTCA 59.868 47.826 0.00 0.00 34.99 3.41
2480 3920 3.385111 AGAGGCCCGAACTATTTAGTCAG 59.615 47.826 0.00 0.00 34.99 3.51
2481 3921 3.371965 AGGCCCGAACTATTTAGTCAGA 58.628 45.455 0.00 0.00 34.99 3.27
2482 3922 3.773119 AGGCCCGAACTATTTAGTCAGAA 59.227 43.478 0.00 0.00 34.99 3.02
2483 3923 4.224370 AGGCCCGAACTATTTAGTCAGAAA 59.776 41.667 0.00 0.00 34.99 2.52
2484 3924 4.331992 GGCCCGAACTATTTAGTCAGAAAC 59.668 45.833 0.00 0.00 34.99 2.78
2485 3925 4.032558 GCCCGAACTATTTAGTCAGAAACG 59.967 45.833 0.00 0.00 34.99 3.60
2486 3926 5.404946 CCCGAACTATTTAGTCAGAAACGA 58.595 41.667 0.00 0.00 34.99 3.85
2487 3927 5.865552 CCCGAACTATTTAGTCAGAAACGAA 59.134 40.000 0.00 0.00 34.99 3.85
2488 3928 6.366877 CCCGAACTATTTAGTCAGAAACGAAA 59.633 38.462 0.00 0.00 36.98 3.46
2489 3929 7.411588 CCCGAACTATTTAGTCAGAAACGAAAG 60.412 40.741 0.00 0.00 36.17 2.62
2490 3930 6.948777 CGAACTATTTAGTCAGAAACGAAAGC 59.051 38.462 0.00 0.00 36.17 3.51
2491 3931 6.390987 ACTATTTAGTCAGAAACGAAAGCG 57.609 37.500 0.00 0.00 44.79 4.68
2492 3932 6.423001 AACTATTTAGTCAGAAACGAAAGCGT 59.577 34.615 0.00 0.00 44.14 5.07
2493 3933 7.359014 AACTATTTAGTCAGAAACGAAAGCGTC 60.359 37.037 0.00 0.00 42.46 5.19
2508 3948 6.345389 GAAAGCGTCGAACTTTGAAAATAC 57.655 37.500 16.90 0.82 37.47 1.89
2509 3949 5.668558 AAGCGTCGAACTTTGAAAATACT 57.331 34.783 0.00 0.00 0.00 2.12
2510 3950 5.668558 AGCGTCGAACTTTGAAAATACTT 57.331 34.783 0.00 0.00 0.00 2.24
2511 3951 6.056428 AGCGTCGAACTTTGAAAATACTTT 57.944 33.333 0.00 0.00 0.00 2.66
2512 3952 6.492254 AGCGTCGAACTTTGAAAATACTTTT 58.508 32.000 0.00 0.00 35.12 2.27
2513 3953 6.970613 AGCGTCGAACTTTGAAAATACTTTTT 59.029 30.769 0.00 0.00 37.75 1.94
2514 3954 8.124199 AGCGTCGAACTTTGAAAATACTTTTTA 58.876 29.630 0.00 0.00 35.20 1.52
2515 3955 8.407458 GCGTCGAACTTTGAAAATACTTTTTAG 58.593 33.333 0.00 0.00 35.20 1.85
2516 3956 8.889000 CGTCGAACTTTGAAAATACTTTTTAGG 58.111 33.333 0.00 0.00 35.20 2.69
2517 3957 9.177304 GTCGAACTTTGAAAATACTTTTTAGGG 57.823 33.333 0.00 0.00 35.20 3.53
2518 3958 9.122779 TCGAACTTTGAAAATACTTTTTAGGGA 57.877 29.630 0.00 0.00 35.20 4.20
2519 3959 9.908152 CGAACTTTGAAAATACTTTTTAGGGAT 57.092 29.630 0.00 0.00 35.20 3.85
2605 4045 7.398834 CATTTCAGGAATGTTCACAAGTTTC 57.601 36.000 0.00 0.00 40.23 2.78
2606 4046 6.522625 TTTCAGGAATGTTCACAAGTTTCA 57.477 33.333 0.00 0.00 0.00 2.69
2607 4047 6.522625 TTCAGGAATGTTCACAAGTTTCAA 57.477 33.333 0.00 0.00 0.00 2.69
2608 4048 6.522625 TCAGGAATGTTCACAAGTTTCAAA 57.477 33.333 0.00 0.00 0.00 2.69
2609 4049 6.929625 TCAGGAATGTTCACAAGTTTCAAAA 58.070 32.000 0.00 0.00 0.00 2.44
2610 4050 7.382110 TCAGGAATGTTCACAAGTTTCAAAAA 58.618 30.769 0.00 0.00 0.00 1.94
2671 4111 5.659440 AAAACATGCCATACCCTTAACAG 57.341 39.130 0.00 0.00 0.00 3.16
2672 4112 3.297134 ACATGCCATACCCTTAACAGG 57.703 47.619 0.00 0.00 40.45 4.00
2673 4113 2.849943 ACATGCCATACCCTTAACAGGA 59.150 45.455 0.00 0.00 44.19 3.86
2674 4114 3.463329 ACATGCCATACCCTTAACAGGAT 59.537 43.478 0.00 0.00 44.19 3.24
2675 4115 4.663120 ACATGCCATACCCTTAACAGGATA 59.337 41.667 0.00 0.00 44.19 2.59
2676 4116 5.313240 ACATGCCATACCCTTAACAGGATAT 59.687 40.000 0.00 0.00 44.19 1.63
2677 4117 6.503924 ACATGCCATACCCTTAACAGGATATA 59.496 38.462 0.00 0.00 44.19 0.86
2678 4118 6.368779 TGCCATACCCTTAACAGGATATAC 57.631 41.667 0.00 0.00 44.19 1.47
2679 4119 5.847265 TGCCATACCCTTAACAGGATATACA 59.153 40.000 0.00 0.00 44.19 2.29
2680 4120 6.503924 TGCCATACCCTTAACAGGATATACAT 59.496 38.462 0.00 0.00 44.19 2.29
2681 4121 6.823689 GCCATACCCTTAACAGGATATACATG 59.176 42.308 0.00 0.00 44.19 3.21
2682 4122 7.338710 CCATACCCTTAACAGGATATACATGG 58.661 42.308 0.00 0.00 44.19 3.66
2683 4123 5.242795 ACCCTTAACAGGATATACATGGC 57.757 43.478 0.00 0.00 44.19 4.40
2684 4124 4.663120 ACCCTTAACAGGATATACATGGCA 59.337 41.667 0.00 0.00 44.19 4.92
2685 4125 5.313240 ACCCTTAACAGGATATACATGGCAT 59.687 40.000 0.00 0.00 44.19 4.40
2686 4126 6.503924 ACCCTTAACAGGATATACATGGCATA 59.496 38.462 0.00 0.00 44.19 3.14
2687 4127 6.823689 CCCTTAACAGGATATACATGGCATAC 59.176 42.308 0.00 0.00 44.19 2.39
2688 4128 7.394016 CCTTAACAGGATATACATGGCATACA 58.606 38.462 0.00 0.00 44.19 2.29
2689 4129 7.882791 CCTTAACAGGATATACATGGCATACAA 59.117 37.037 0.00 0.00 44.19 2.41
2690 4130 9.283768 CTTAACAGGATATACATGGCATACAAA 57.716 33.333 0.00 0.00 34.35 2.83
2691 4131 9.634021 TTAACAGGATATACATGGCATACAAAA 57.366 29.630 0.00 0.00 34.35 2.44
2692 4132 8.710749 AACAGGATATACATGGCATACAAAAT 57.289 30.769 0.00 0.00 34.35 1.82
2693 4133 9.806448 AACAGGATATACATGGCATACAAAATA 57.194 29.630 0.00 0.00 34.35 1.40
2694 4134 9.806448 ACAGGATATACATGGCATACAAAATAA 57.194 29.630 0.00 0.00 34.35 1.40
2746 4186 9.849166 AGAAAACGAATACAAAAAGAACAAAGA 57.151 25.926 0.00 0.00 0.00 2.52
2765 4205 3.963676 AAAAACAGAGCAATGCGCA 57.036 42.105 14.96 14.96 46.13 6.09
2766 4206 1.490621 AAAAACAGAGCAATGCGCAC 58.509 45.000 14.90 0.00 46.13 5.34
2767 4207 0.661187 AAAACAGAGCAATGCGCACG 60.661 50.000 14.90 8.57 46.13 5.34
2768 4208 3.599792 AACAGAGCAATGCGCACGC 62.600 57.895 22.56 22.56 46.13 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 163 3.997021 CACAACCACCTTGACTATGACTC 59.003 47.826 0.00 0.00 33.59 3.36
151 196 6.663093 TGAGGATTTTTATGCATACACAAGGT 59.337 34.615 5.74 0.00 0.00 3.50
165 210 3.631250 GTGCCCCAGATGAGGATTTTTA 58.369 45.455 0.00 0.00 0.00 1.52
182 227 0.031994 AAACCAATTGTGCTCGTGCC 59.968 50.000 7.05 0.00 38.71 5.01
248 293 6.210185 ACTCGATAACCAACCAAGTAGTAGTT 59.790 38.462 0.00 0.00 0.00 2.24
281 326 5.675684 TTGGCAACTCTGTGTGAGATATA 57.324 39.130 0.00 0.00 45.39 0.86
290 335 5.375417 TGTCAATTATTGGCAACTCTGTG 57.625 39.130 9.99 0.00 43.24 3.66
337 382 2.276472 TAGCGAAATGTTGGCATTGC 57.724 45.000 0.00 0.00 43.89 3.56
338 383 4.422840 TGATTAGCGAAATGTTGGCATTG 58.577 39.130 0.00 0.00 43.89 2.82
339 384 4.717233 TGATTAGCGAAATGTTGGCATT 57.283 36.364 0.00 0.00 46.38 3.56
340 385 4.717233 TTGATTAGCGAAATGTTGGCAT 57.283 36.364 0.00 0.00 36.79 4.40
341 386 4.511617 TTTGATTAGCGAAATGTTGGCA 57.488 36.364 0.00 0.00 36.79 4.92
342 387 7.434897 TCAATATTTGATTAGCGAAATGTTGGC 59.565 33.333 0.00 0.00 39.36 4.52
343 388 8.745837 GTCAATATTTGATTAGCGAAATGTTGG 58.254 33.333 0.00 0.00 42.47 3.77
344 389 9.288124 TGTCAATATTTGATTAGCGAAATGTTG 57.712 29.630 0.00 0.00 42.47 3.33
345 390 9.507280 CTGTCAATATTTGATTAGCGAAATGTT 57.493 29.630 0.00 0.00 42.47 2.71
346 391 8.677300 ACTGTCAATATTTGATTAGCGAAATGT 58.323 29.630 0.00 0.00 42.47 2.71
347 392 8.950961 CACTGTCAATATTTGATTAGCGAAATG 58.049 33.333 0.00 0.00 42.47 2.32
348 393 8.892723 TCACTGTCAATATTTGATTAGCGAAAT 58.107 29.630 0.00 0.00 42.47 2.17
349 394 8.262715 TCACTGTCAATATTTGATTAGCGAAA 57.737 30.769 0.00 0.00 42.47 3.46
350 395 7.841915 TCACTGTCAATATTTGATTAGCGAA 57.158 32.000 0.00 0.00 42.47 4.70
357 402 8.352137 TGATTGGTTCACTGTCAATATTTGAT 57.648 30.769 0.00 0.00 42.47 2.57
371 416 4.274459 GGATGTAGAGCATGATTGGTTCAC 59.726 45.833 0.00 0.00 38.06 3.18
458 511 0.475044 CTCTACCCTACTCCGCTCCT 59.525 60.000 0.00 0.00 0.00 3.69
464 534 1.108132 CGGTGCCTCTACCCTACTCC 61.108 65.000 0.00 0.00 37.44 3.85
471 541 4.278956 CACAACGGTGCCTCTACC 57.721 61.111 0.00 0.00 38.37 3.18
513 584 3.609409 GCAAACCGATTCTTCTGTGGAAC 60.609 47.826 0.00 0.00 37.35 3.62
530 601 1.082104 CGCGGTTCCAGAAGCAAAC 60.082 57.895 9.97 0.00 38.62 2.93
549 620 4.323562 CCTGAATATTCGGAGGGGATTACC 60.324 50.000 23.36 0.00 35.56 2.85
616 705 2.372690 CGTCGTGGAAGGAAGCGTG 61.373 63.158 0.00 0.00 29.57 5.34
623 712 0.600255 AAGCAAGTCGTCGTGGAAGG 60.600 55.000 0.00 0.00 0.00 3.46
696 1990 3.864583 ACGTATAAAACTCGCGCCATTTA 59.135 39.130 0.00 6.86 0.00 1.40
716 2011 8.907685 TCAAGAAACAACTTCACTTTTTAAACG 58.092 29.630 0.00 0.00 36.40 3.60
756 2051 1.069500 CCGCCGTTTGATTTCGTTTCT 60.069 47.619 0.00 0.00 0.00 2.52
757 2052 1.323791 CCGCCGTTTGATTTCGTTTC 58.676 50.000 0.00 0.00 0.00 2.78
779 2075 2.029844 GCTGTGAGTCGGAGTTGCC 61.030 63.158 0.00 0.00 0.00 4.52
780 2076 2.029844 GGCTGTGAGTCGGAGTTGC 61.030 63.158 0.00 0.00 0.00 4.17
782 2078 1.867919 CGAGGCTGTGAGTCGGAGTT 61.868 60.000 0.00 0.00 0.00 3.01
783 2079 2.336478 CGAGGCTGTGAGTCGGAGT 61.336 63.158 0.00 0.00 0.00 3.85
784 2080 2.259875 GACGAGGCTGTGAGTCGGAG 62.260 65.000 0.00 0.00 38.03 4.63
785 2081 2.282251 ACGAGGCTGTGAGTCGGA 60.282 61.111 0.00 0.00 38.03 4.55
793 2090 2.336478 CGAGACCAGACGAGGCTGT 61.336 63.158 5.12 0.00 34.06 4.40
801 2098 2.062519 GCTTTTGAGACGAGACCAGAC 58.937 52.381 0.00 0.00 0.00 3.51
802 2099 1.686587 TGCTTTTGAGACGAGACCAGA 59.313 47.619 0.00 0.00 0.00 3.86
803 2100 2.064762 CTGCTTTTGAGACGAGACCAG 58.935 52.381 0.00 0.00 0.00 4.00
804 2101 1.873903 GCTGCTTTTGAGACGAGACCA 60.874 52.381 0.00 0.00 0.00 4.02
805 2102 0.793250 GCTGCTTTTGAGACGAGACC 59.207 55.000 0.00 0.00 0.00 3.85
840 2137 0.517316 CGCTGTTCAAACCTGGCTAC 59.483 55.000 0.00 0.00 0.00 3.58
841 2138 0.107831 ACGCTGTTCAAACCTGGCTA 59.892 50.000 0.00 0.00 0.00 3.93
865 2174 9.523168 GTCTTATTATGTATAGACTGGAGACCT 57.477 37.037 0.00 0.00 0.00 3.85
867 2176 8.741841 GGGTCTTATTATGTATAGACTGGAGAC 58.258 40.741 0.00 0.00 0.00 3.36
868 2177 7.894364 GGGGTCTTATTATGTATAGACTGGAGA 59.106 40.741 0.00 0.00 0.00 3.71
886 2249 0.042731 AGCAGCTAGGTGGGGTCTTA 59.957 55.000 22.69 0.00 0.00 2.10
888 2251 1.687493 GAGCAGCTAGGTGGGGTCT 60.687 63.158 22.69 11.33 0.00 3.85
889 2252 1.681486 GAGAGCAGCTAGGTGGGGTC 61.681 65.000 22.69 12.83 0.00 4.46
891 2254 1.053264 ATGAGAGCAGCTAGGTGGGG 61.053 60.000 22.69 0.00 0.00 4.96
902 2265 1.196766 AGTGTGGGCTGATGAGAGCA 61.197 55.000 0.00 0.00 41.08 4.26
904 2267 1.193323 AGAGTGTGGGCTGATGAGAG 58.807 55.000 0.00 0.00 0.00 3.20
905 2268 1.649321 AAGAGTGTGGGCTGATGAGA 58.351 50.000 0.00 0.00 0.00 3.27
915 2278 2.610727 GGGAGACGAGAAAAGAGTGTGG 60.611 54.545 0.00 0.00 0.00 4.17
979 2362 4.717629 TGGAGTTGCCGAGTCGCG 62.718 66.667 7.12 0.00 40.66 5.87
1026 2411 2.746359 GTGGAGAGTGGCAGCAGT 59.254 61.111 0.00 0.00 0.00 4.40
1059 2444 1.004277 CCGCGTCTCTGTTGTCAGTC 61.004 60.000 4.92 0.00 41.91 3.51
1851 3291 2.730550 TCTCGGTCGGGTTTTTAGAC 57.269 50.000 0.00 0.00 0.00 2.59
1854 3294 2.159057 GGCTATCTCGGTCGGGTTTTTA 60.159 50.000 0.00 0.00 0.00 1.52
1857 3297 0.686769 AGGCTATCTCGGTCGGGTTT 60.687 55.000 0.00 0.00 0.00 3.27
1858 3298 0.184451 TAGGCTATCTCGGTCGGGTT 59.816 55.000 0.00 0.00 0.00 4.11
1859 3299 0.536915 GTAGGCTATCTCGGTCGGGT 60.537 60.000 0.00 0.00 0.00 5.28
1860 3300 0.250814 AGTAGGCTATCTCGGTCGGG 60.251 60.000 0.00 0.00 0.00 5.14
1861 3301 2.075338 GTAGTAGGCTATCTCGGTCGG 58.925 57.143 0.00 0.00 0.00 4.79
1862 3302 2.995258 GAGTAGTAGGCTATCTCGGTCG 59.005 54.545 0.00 0.00 0.00 4.79
1863 3303 4.248058 GAGAGTAGTAGGCTATCTCGGTC 58.752 52.174 7.02 3.75 34.04 4.79
1864 3304 3.647113 TGAGAGTAGTAGGCTATCTCGGT 59.353 47.826 14.81 3.45 36.17 4.69
1865 3305 3.998341 GTGAGAGTAGTAGGCTATCTCGG 59.002 52.174 14.81 0.00 36.17 4.63
1866 3306 4.633175 TGTGAGAGTAGTAGGCTATCTCG 58.367 47.826 14.81 0.00 36.17 4.04
1867 3307 5.699458 GTCTGTGAGAGTAGTAGGCTATCTC 59.301 48.000 13.52 13.52 35.21 2.75
1868 3308 5.131308 TGTCTGTGAGAGTAGTAGGCTATCT 59.869 44.000 0.00 0.00 0.00 1.98
1869 3309 5.369833 TGTCTGTGAGAGTAGTAGGCTATC 58.630 45.833 0.00 0.00 0.00 2.08
1870 3310 5.375283 TGTCTGTGAGAGTAGTAGGCTAT 57.625 43.478 0.00 0.00 0.00 2.97
1871 3311 4.838904 TGTCTGTGAGAGTAGTAGGCTA 57.161 45.455 0.00 0.00 0.00 3.93
1872 3312 3.722908 TGTCTGTGAGAGTAGTAGGCT 57.277 47.619 0.00 0.00 0.00 4.58
1873 3313 4.011023 TCTTGTCTGTGAGAGTAGTAGGC 58.989 47.826 0.00 0.00 0.00 3.93
1874 3314 5.811399 CTCTTGTCTGTGAGAGTAGTAGG 57.189 47.826 0.00 0.00 35.72 3.18
1881 3321 3.397482 CCCAAACTCTTGTCTGTGAGAG 58.603 50.000 0.00 0.00 43.90 3.20
1882 3322 2.485479 GCCCAAACTCTTGTCTGTGAGA 60.485 50.000 0.00 0.00 34.65 3.27
1883 3323 1.876156 GCCCAAACTCTTGTCTGTGAG 59.124 52.381 0.00 0.00 36.47 3.51
1884 3324 1.476833 GGCCCAAACTCTTGTCTGTGA 60.477 52.381 0.00 0.00 0.00 3.58
1885 3325 0.954452 GGCCCAAACTCTTGTCTGTG 59.046 55.000 0.00 0.00 0.00 3.66
1886 3326 0.535102 CGGCCCAAACTCTTGTCTGT 60.535 55.000 0.00 0.00 0.00 3.41
1887 3327 1.237285 CCGGCCCAAACTCTTGTCTG 61.237 60.000 0.00 0.00 0.00 3.51
1888 3328 1.073199 CCGGCCCAAACTCTTGTCT 59.927 57.895 0.00 0.00 0.00 3.41
1889 3329 2.626780 GCCGGCCCAAACTCTTGTC 61.627 63.158 18.11 0.00 0.00 3.18
1890 3330 2.597510 GCCGGCCCAAACTCTTGT 60.598 61.111 18.11 0.00 0.00 3.16
1891 3331 3.373565 GGCCGGCCCAAACTCTTG 61.374 66.667 36.64 0.00 0.00 3.02
1901 3341 2.287264 TTTGTTATAGGGGGCCGGCC 62.287 60.000 38.57 38.57 0.00 6.13
1902 3342 0.822121 CTTTGTTATAGGGGGCCGGC 60.822 60.000 21.18 21.18 0.00 6.13
1903 3343 0.822121 GCTTTGTTATAGGGGGCCGG 60.822 60.000 0.00 0.00 0.00 6.13
1904 3344 0.106918 TGCTTTGTTATAGGGGGCCG 60.107 55.000 0.00 0.00 0.00 6.13
1905 3345 2.031870 CTTGCTTTGTTATAGGGGGCC 58.968 52.381 0.00 0.00 0.00 5.80
1906 3346 3.012934 TCTTGCTTTGTTATAGGGGGC 57.987 47.619 0.00 0.00 0.00 5.80
1907 3347 5.221048 CGAATTCTTGCTTTGTTATAGGGGG 60.221 44.000 3.52 0.00 0.00 5.40
1908 3348 5.357032 ACGAATTCTTGCTTTGTTATAGGGG 59.643 40.000 3.52 0.00 0.00 4.79
1909 3349 6.093495 TCACGAATTCTTGCTTTGTTATAGGG 59.907 38.462 7.05 0.00 0.00 3.53
1910 3350 7.072177 TCACGAATTCTTGCTTTGTTATAGG 57.928 36.000 7.05 0.00 0.00 2.57
1911 3351 7.148407 ACCTCACGAATTCTTGCTTTGTTATAG 60.148 37.037 7.05 0.00 0.00 1.31
1912 3352 6.653320 ACCTCACGAATTCTTGCTTTGTTATA 59.347 34.615 7.05 0.00 0.00 0.98
1913 3353 5.473504 ACCTCACGAATTCTTGCTTTGTTAT 59.526 36.000 7.05 0.00 0.00 1.89
1914 3354 4.819630 ACCTCACGAATTCTTGCTTTGTTA 59.180 37.500 7.05 0.00 0.00 2.41
1915 3355 3.632145 ACCTCACGAATTCTTGCTTTGTT 59.368 39.130 7.05 0.00 0.00 2.83
1916 3356 3.214328 ACCTCACGAATTCTTGCTTTGT 58.786 40.909 7.05 0.00 0.00 2.83
1917 3357 3.499918 AGACCTCACGAATTCTTGCTTTG 59.500 43.478 7.05 0.00 0.00 2.77
1918 3358 3.744660 AGACCTCACGAATTCTTGCTTT 58.255 40.909 7.05 0.00 0.00 3.51
1919 3359 3.409026 AGACCTCACGAATTCTTGCTT 57.591 42.857 7.05 0.00 0.00 3.91
1920 3360 4.537135 TTAGACCTCACGAATTCTTGCT 57.463 40.909 7.05 1.81 0.00 3.91
1921 3361 5.607119 TTTTAGACCTCACGAATTCTTGC 57.393 39.130 7.05 0.00 0.00 4.01
1944 3384 6.454795 ACAATTTTAGAAATGCACGGACATT 58.545 32.000 0.00 0.00 42.01 2.71
1945 3385 6.024552 ACAATTTTAGAAATGCACGGACAT 57.975 33.333 0.00 0.00 0.00 3.06
1946 3386 5.446143 ACAATTTTAGAAATGCACGGACA 57.554 34.783 0.00 0.00 0.00 4.02
1947 3387 4.857037 GGACAATTTTAGAAATGCACGGAC 59.143 41.667 0.00 0.00 0.00 4.79
1948 3388 4.520874 TGGACAATTTTAGAAATGCACGGA 59.479 37.500 0.00 0.00 0.00 4.69
1949 3389 4.804108 TGGACAATTTTAGAAATGCACGG 58.196 39.130 0.00 0.00 0.00 4.94
1950 3390 6.761731 TTTGGACAATTTTAGAAATGCACG 57.238 33.333 0.00 0.00 0.00 5.34
1951 3391 8.141835 ACTTTTGGACAATTTTAGAAATGCAC 57.858 30.769 0.00 0.00 0.00 4.57
1952 3392 8.729805 AACTTTTGGACAATTTTAGAAATGCA 57.270 26.923 0.00 0.00 0.00 3.96
1965 3405 8.722394 GGACATTTTGTTTTAACTTTTGGACAA 58.278 29.630 0.00 0.00 0.00 3.18
1966 3406 8.097662 AGGACATTTTGTTTTAACTTTTGGACA 58.902 29.630 0.00 0.00 0.00 4.02
1967 3407 8.387354 CAGGACATTTTGTTTTAACTTTTGGAC 58.613 33.333 0.00 0.00 0.00 4.02
1968 3408 8.097662 ACAGGACATTTTGTTTTAACTTTTGGA 58.902 29.630 0.00 0.00 0.00 3.53
1969 3409 8.262715 ACAGGACATTTTGTTTTAACTTTTGG 57.737 30.769 0.00 0.00 0.00 3.28
1980 3420 9.533253 CAGAAATAGAAAACAGGACATTTTGTT 57.467 29.630 0.00 0.00 39.08 2.83
1981 3421 8.143835 CCAGAAATAGAAAACAGGACATTTTGT 58.856 33.333 0.00 0.00 29.44 2.83
1982 3422 7.116805 GCCAGAAATAGAAAACAGGACATTTTG 59.883 37.037 0.00 0.00 29.44 2.44
1983 3423 7.154656 GCCAGAAATAGAAAACAGGACATTTT 58.845 34.615 0.00 0.00 31.96 1.82
1984 3424 6.267471 TGCCAGAAATAGAAAACAGGACATTT 59.733 34.615 0.00 0.00 0.00 2.32
1985 3425 5.774690 TGCCAGAAATAGAAAACAGGACATT 59.225 36.000 0.00 0.00 0.00 2.71
1986 3426 5.183904 GTGCCAGAAATAGAAAACAGGACAT 59.816 40.000 0.00 0.00 0.00 3.06
1987 3427 4.518970 GTGCCAGAAATAGAAAACAGGACA 59.481 41.667 0.00 0.00 0.00 4.02
1988 3428 4.518970 TGTGCCAGAAATAGAAAACAGGAC 59.481 41.667 0.00 0.00 0.00 3.85
1989 3429 4.724399 TGTGCCAGAAATAGAAAACAGGA 58.276 39.130 0.00 0.00 0.00 3.86
1990 3430 5.452078 TTGTGCCAGAAATAGAAAACAGG 57.548 39.130 0.00 0.00 0.00 4.00
1991 3431 7.652909 TGAATTTGTGCCAGAAATAGAAAACAG 59.347 33.333 0.00 0.00 0.00 3.16
1992 3432 7.495901 TGAATTTGTGCCAGAAATAGAAAACA 58.504 30.769 0.00 0.00 0.00 2.83
1993 3433 7.945033 TGAATTTGTGCCAGAAATAGAAAAC 57.055 32.000 0.00 0.00 0.00 2.43
1994 3434 9.558396 AATTGAATTTGTGCCAGAAATAGAAAA 57.442 25.926 0.00 0.00 0.00 2.29
1995 3435 9.206870 GAATTGAATTTGTGCCAGAAATAGAAA 57.793 29.630 0.00 0.00 0.00 2.52
1996 3436 7.818930 GGAATTGAATTTGTGCCAGAAATAGAA 59.181 33.333 0.00 0.00 0.00 2.10
1997 3437 7.178983 AGGAATTGAATTTGTGCCAGAAATAGA 59.821 33.333 0.00 0.00 0.00 1.98
1998 3438 7.325694 AGGAATTGAATTTGTGCCAGAAATAG 58.674 34.615 0.00 0.00 0.00 1.73
1999 3439 7.243604 AGGAATTGAATTTGTGCCAGAAATA 57.756 32.000 0.00 0.00 0.00 1.40
2000 3440 6.117975 AGGAATTGAATTTGTGCCAGAAAT 57.882 33.333 0.00 0.00 0.00 2.17
2001 3441 5.549742 AGGAATTGAATTTGTGCCAGAAA 57.450 34.783 0.00 0.00 0.00 2.52
2002 3442 5.549742 AAGGAATTGAATTTGTGCCAGAA 57.450 34.783 0.00 0.00 0.00 3.02
2003 3443 5.549742 AAAGGAATTGAATTTGTGCCAGA 57.450 34.783 0.00 0.00 0.00 3.86
2004 3444 5.528320 ACAAAAGGAATTGAATTTGTGCCAG 59.472 36.000 9.87 0.00 34.38 4.85
2005 3445 5.296283 CACAAAAGGAATTGAATTTGTGCCA 59.704 36.000 18.70 0.00 41.44 4.92
2006 3446 5.750650 CACAAAAGGAATTGAATTTGTGCC 58.249 37.500 18.70 0.00 41.44 5.01
2009 3449 9.838975 GAAAAACACAAAAGGAATTGAATTTGT 57.161 25.926 0.00 6.35 34.38 2.83
2010 3450 9.837525 TGAAAAACACAAAAGGAATTGAATTTG 57.162 25.926 0.00 0.00 34.38 2.32
2012 3452 9.447157 TCTGAAAAACACAAAAGGAATTGAATT 57.553 25.926 0.00 0.00 34.38 2.17
2013 3453 9.447157 TTCTGAAAAACACAAAAGGAATTGAAT 57.553 25.926 0.00 0.00 34.38 2.57
2014 3454 8.839310 TTCTGAAAAACACAAAAGGAATTGAA 57.161 26.923 0.00 0.00 34.38 2.69
2015 3455 8.839310 TTTCTGAAAAACACAAAAGGAATTGA 57.161 26.923 0.00 0.00 34.38 2.57
2043 3483 9.868277 TGCGAATAGTATTTCAAAATTCCAAAT 57.132 25.926 0.00 0.00 0.00 2.32
2044 3484 9.868277 ATGCGAATAGTATTTCAAAATTCCAAA 57.132 25.926 0.00 0.00 0.00 3.28
2045 3485 9.868277 AATGCGAATAGTATTTCAAAATTCCAA 57.132 25.926 0.00 0.00 30.84 3.53
2046 3486 9.868277 AAATGCGAATAGTATTTCAAAATTCCA 57.132 25.926 0.00 0.00 40.36 3.53
2059 3499 9.320406 CGAACAGTTTTAAAAATGCGAATAGTA 57.680 29.630 24.10 0.00 37.49 1.82
2060 3500 7.858879 ACGAACAGTTTTAAAAATGCGAATAGT 59.141 29.630 24.10 14.31 37.49 2.12
2061 3501 8.147172 CACGAACAGTTTTAAAAATGCGAATAG 58.853 33.333 24.10 13.81 37.49 1.73
2062 3502 7.113684 CCACGAACAGTTTTAAAAATGCGAATA 59.886 33.333 24.10 0.00 37.49 1.75
2063 3503 6.074569 CCACGAACAGTTTTAAAAATGCGAAT 60.075 34.615 24.10 11.06 37.49 3.34
2064 3504 5.230306 CCACGAACAGTTTTAAAAATGCGAA 59.770 36.000 24.10 0.00 37.49 4.70
2065 3505 4.735822 CCACGAACAGTTTTAAAAATGCGA 59.264 37.500 24.10 0.00 37.49 5.10
2066 3506 4.501198 ACCACGAACAGTTTTAAAAATGCG 59.499 37.500 24.10 21.59 37.49 4.73
2067 3507 5.959652 ACCACGAACAGTTTTAAAAATGC 57.040 34.783 24.10 10.98 37.49 3.56
2068 3508 9.678247 GTAAAACCACGAACAGTTTTAAAAATG 57.322 29.630 22.93 22.93 45.20 2.32
2069 3509 9.420551 TGTAAAACCACGAACAGTTTTAAAAAT 57.579 25.926 1.31 0.00 45.20 1.82
2070 3510 8.807667 TGTAAAACCACGAACAGTTTTAAAAA 57.192 26.923 1.31 0.00 45.20 1.94
2071 3511 8.807667 TTGTAAAACCACGAACAGTTTTAAAA 57.192 26.923 9.04 7.88 45.20 1.52
2072 3512 8.807667 TTTGTAAAACCACGAACAGTTTTAAA 57.192 26.923 9.04 2.72 45.20 1.52
2073 3513 8.807667 TTTTGTAAAACCACGAACAGTTTTAA 57.192 26.923 9.04 0.00 45.20 1.52
2074 3514 8.983307 ATTTTGTAAAACCACGAACAGTTTTA 57.017 26.923 4.44 4.44 42.72 1.52
2075 3515 7.599245 TGATTTTGTAAAACCACGAACAGTTTT 59.401 29.630 6.18 6.18 45.51 2.43
2076 3516 7.091443 TGATTTTGTAAAACCACGAACAGTTT 58.909 30.769 0.00 0.00 37.80 2.66
2077 3517 6.622549 TGATTTTGTAAAACCACGAACAGTT 58.377 32.000 0.00 0.00 0.00 3.16
2078 3518 6.197364 TGATTTTGTAAAACCACGAACAGT 57.803 33.333 0.00 0.00 0.00 3.55
2079 3519 6.970043 TCTTGATTTTGTAAAACCACGAACAG 59.030 34.615 0.00 0.00 0.00 3.16
2080 3520 6.853720 TCTTGATTTTGTAAAACCACGAACA 58.146 32.000 0.00 0.00 0.00 3.18
2081 3521 7.743520 TTCTTGATTTTGTAAAACCACGAAC 57.256 32.000 0.71 0.00 28.27 3.95
2082 3522 8.758633 TTTTCTTGATTTTGTAAAACCACGAA 57.241 26.923 0.71 0.71 30.52 3.85
2083 3523 8.934507 ATTTTCTTGATTTTGTAAAACCACGA 57.065 26.923 0.00 0.00 0.00 4.35
2084 3524 9.631639 GAATTTTCTTGATTTTGTAAAACCACG 57.368 29.630 0.00 0.00 0.00 4.94
2093 3533 9.835389 TGGAATTCTGAATTTTCTTGATTTTGT 57.165 25.926 16.14 0.00 0.00 2.83
2125 3565 8.883731 CGAAACCTTCTTCATAGTATGTGAATT 58.116 33.333 9.94 7.50 35.26 2.17
2126 3566 7.495934 CCGAAACCTTCTTCATAGTATGTGAAT 59.504 37.037 9.94 2.37 35.26 2.57
2127 3567 6.816640 CCGAAACCTTCTTCATAGTATGTGAA 59.183 38.462 9.94 13.24 34.63 3.18
2128 3568 6.153851 TCCGAAACCTTCTTCATAGTATGTGA 59.846 38.462 9.94 7.16 0.00 3.58
2129 3569 6.338146 TCCGAAACCTTCTTCATAGTATGTG 58.662 40.000 9.94 5.08 0.00 3.21
2130 3570 6.540438 TCCGAAACCTTCTTCATAGTATGT 57.460 37.500 9.94 0.00 0.00 2.29
2131 3571 8.438676 AAATCCGAAACCTTCTTCATAGTATG 57.561 34.615 3.55 3.55 0.00 2.39
2132 3572 9.110502 GAAAATCCGAAACCTTCTTCATAGTAT 57.889 33.333 0.00 0.00 0.00 2.12
2133 3573 8.098286 TGAAAATCCGAAACCTTCTTCATAGTA 58.902 33.333 0.00 0.00 0.00 1.82
2134 3574 6.940298 TGAAAATCCGAAACCTTCTTCATAGT 59.060 34.615 0.00 0.00 0.00 2.12
2135 3575 7.377766 TGAAAATCCGAAACCTTCTTCATAG 57.622 36.000 0.00 0.00 0.00 2.23
2136 3576 7.753309 TTGAAAATCCGAAACCTTCTTCATA 57.247 32.000 0.00 0.00 0.00 2.15
2137 3577 6.648879 TTGAAAATCCGAAACCTTCTTCAT 57.351 33.333 0.00 0.00 0.00 2.57
2138 3578 6.458232 TTTGAAAATCCGAAACCTTCTTCA 57.542 33.333 0.00 0.00 0.00 3.02
2139 3579 7.946655 ATTTTGAAAATCCGAAACCTTCTTC 57.053 32.000 0.00 0.00 0.00 2.87
2140 3580 7.768582 ACAATTTTGAAAATCCGAAACCTTCTT 59.231 29.630 3.32 0.00 0.00 2.52
2141 3581 7.272244 ACAATTTTGAAAATCCGAAACCTTCT 58.728 30.769 3.32 0.00 0.00 2.85
2142 3582 7.438160 AGACAATTTTGAAAATCCGAAACCTTC 59.562 33.333 3.32 0.00 0.00 3.46
2143 3583 7.272244 AGACAATTTTGAAAATCCGAAACCTT 58.728 30.769 3.32 0.00 0.00 3.50
2144 3584 6.816136 AGACAATTTTGAAAATCCGAAACCT 58.184 32.000 3.32 0.00 0.00 3.50
2145 3585 7.477144 AAGACAATTTTGAAAATCCGAAACC 57.523 32.000 3.32 0.00 0.00 3.27
2228 3668 4.511082 CAGCCAACAATCCGAAACATTTTT 59.489 37.500 0.00 0.00 0.00 1.94
2229 3669 4.057432 CAGCCAACAATCCGAAACATTTT 58.943 39.130 0.00 0.00 0.00 1.82
2230 3670 3.652274 CAGCCAACAATCCGAAACATTT 58.348 40.909 0.00 0.00 0.00 2.32
2231 3671 2.610232 GCAGCCAACAATCCGAAACATT 60.610 45.455 0.00 0.00 0.00 2.71
2232 3672 1.067635 GCAGCCAACAATCCGAAACAT 60.068 47.619 0.00 0.00 0.00 2.71
2233 3673 0.313672 GCAGCCAACAATCCGAAACA 59.686 50.000 0.00 0.00 0.00 2.83
2234 3674 0.729140 CGCAGCCAACAATCCGAAAC 60.729 55.000 0.00 0.00 0.00 2.78
2235 3675 1.578926 CGCAGCCAACAATCCGAAA 59.421 52.632 0.00 0.00 0.00 3.46
2236 3676 2.331893 CCGCAGCCAACAATCCGAA 61.332 57.895 0.00 0.00 0.00 4.30
2237 3677 2.745884 CCGCAGCCAACAATCCGA 60.746 61.111 0.00 0.00 0.00 4.55
2238 3678 2.745884 TCCGCAGCCAACAATCCG 60.746 61.111 0.00 0.00 0.00 4.18
2239 3679 0.392461 TAGTCCGCAGCCAACAATCC 60.392 55.000 0.00 0.00 0.00 3.01
2240 3680 1.009829 CTAGTCCGCAGCCAACAATC 58.990 55.000 0.00 0.00 0.00 2.67
2241 3681 0.613260 TCTAGTCCGCAGCCAACAAT 59.387 50.000 0.00 0.00 0.00 2.71
2242 3682 0.320421 GTCTAGTCCGCAGCCAACAA 60.320 55.000 0.00 0.00 0.00 2.83
2243 3683 1.185618 AGTCTAGTCCGCAGCCAACA 61.186 55.000 0.00 0.00 0.00 3.33
2244 3684 0.737715 CAGTCTAGTCCGCAGCCAAC 60.738 60.000 0.00 0.00 0.00 3.77
2245 3685 1.591703 CAGTCTAGTCCGCAGCCAA 59.408 57.895 0.00 0.00 0.00 4.52
2246 3686 2.351244 CCAGTCTAGTCCGCAGCCA 61.351 63.158 0.00 0.00 0.00 4.75
2247 3687 2.496817 CCAGTCTAGTCCGCAGCC 59.503 66.667 0.00 0.00 0.00 4.85
2248 3688 2.496817 CCCAGTCTAGTCCGCAGC 59.503 66.667 0.00 0.00 0.00 5.25
2249 3689 2.496817 GCCCAGTCTAGTCCGCAG 59.503 66.667 0.00 0.00 0.00 5.18
2250 3690 3.075005 GGCCCAGTCTAGTCCGCA 61.075 66.667 0.00 0.00 0.00 5.69
2251 3691 4.208686 CGGCCCAGTCTAGTCCGC 62.209 72.222 0.00 0.00 33.36 5.54
2252 3692 4.208686 GCGGCCCAGTCTAGTCCG 62.209 72.222 0.00 0.00 42.68 4.79
2253 3693 3.851128 GGCGGCCCAGTCTAGTCC 61.851 72.222 8.12 0.00 0.00 3.85
2254 3694 3.851128 GGGCGGCCCAGTCTAGTC 61.851 72.222 32.90 1.31 44.65 2.59
2264 3704 3.570212 ATATCTGGTGGGGCGGCC 61.570 66.667 22.00 22.00 0.00 6.13
2265 3705 2.281761 CATATCTGGTGGGGCGGC 60.282 66.667 0.00 0.00 0.00 6.53
2266 3706 0.250467 CTTCATATCTGGTGGGGCGG 60.250 60.000 0.00 0.00 0.00 6.13
2267 3707 0.886490 GCTTCATATCTGGTGGGGCG 60.886 60.000 0.00 0.00 0.00 6.13
2268 3708 0.886490 CGCTTCATATCTGGTGGGGC 60.886 60.000 0.00 0.00 0.00 5.80
2269 3709 0.758734 TCGCTTCATATCTGGTGGGG 59.241 55.000 0.00 0.00 0.00 4.96
2270 3710 1.414181 ACTCGCTTCATATCTGGTGGG 59.586 52.381 0.00 0.00 0.00 4.61
2271 3711 2.898729 ACTCGCTTCATATCTGGTGG 57.101 50.000 0.00 0.00 0.00 4.61
2272 3712 5.551760 AAAAACTCGCTTCATATCTGGTG 57.448 39.130 0.00 0.00 0.00 4.17
2306 3746 9.965824 AAGAAAGAAATAATTTTCACGTCATGT 57.034 25.926 0.00 0.00 43.09 3.21
2322 3762 8.968242 GTCGTGCATTAAAGAAAAGAAAGAAAT 58.032 29.630 0.00 0.00 0.00 2.17
2323 3763 7.165154 CGTCGTGCATTAAAGAAAAGAAAGAAA 59.835 33.333 0.00 0.00 0.00 2.52
2324 3764 6.631238 CGTCGTGCATTAAAGAAAAGAAAGAA 59.369 34.615 0.00 0.00 0.00 2.52
2325 3765 6.133392 CGTCGTGCATTAAAGAAAAGAAAGA 58.867 36.000 0.00 0.00 0.00 2.52
2326 3766 5.907391 ACGTCGTGCATTAAAGAAAAGAAAG 59.093 36.000 0.00 0.00 0.00 2.62
2327 3767 5.812652 ACGTCGTGCATTAAAGAAAAGAAA 58.187 33.333 0.00 0.00 0.00 2.52
2328 3768 5.412526 ACGTCGTGCATTAAAGAAAAGAA 57.587 34.783 0.00 0.00 0.00 2.52
2329 3769 6.528014 TTACGTCGTGCATTAAAGAAAAGA 57.472 33.333 8.47 0.00 0.00 2.52
2330 3770 8.868744 TTATTACGTCGTGCATTAAAGAAAAG 57.131 30.769 8.47 0.00 0.00 2.27
2331 3771 9.828852 AATTATTACGTCGTGCATTAAAGAAAA 57.171 25.926 8.47 0.00 0.00 2.29
2332 3772 9.480538 GAATTATTACGTCGTGCATTAAAGAAA 57.519 29.630 8.47 0.00 0.00 2.52
2333 3773 7.842239 CGAATTATTACGTCGTGCATTAAAGAA 59.158 33.333 8.47 0.00 0.00 2.52
2334 3774 7.220491 TCGAATTATTACGTCGTGCATTAAAGA 59.780 33.333 8.47 0.00 36.21 2.52
2335 3775 7.331792 TCGAATTATTACGTCGTGCATTAAAG 58.668 34.615 8.47 0.00 36.21 1.85
2336 3776 7.219372 TCGAATTATTACGTCGTGCATTAAA 57.781 32.000 8.47 0.00 36.21 1.52
2337 3777 6.809297 TCGAATTATTACGTCGTGCATTAA 57.191 33.333 8.47 1.34 36.21 1.40
2338 3778 6.809297 TTCGAATTATTACGTCGTGCATTA 57.191 33.333 8.47 0.00 36.21 1.90
2339 3779 5.705813 TTCGAATTATTACGTCGTGCATT 57.294 34.783 8.47 0.73 36.21 3.56
2340 3780 5.705813 TTTCGAATTATTACGTCGTGCAT 57.294 34.783 8.47 2.63 36.21 3.96
2341 3781 5.118971 ACTTTTCGAATTATTACGTCGTGCA 59.881 36.000 8.47 0.00 36.21 4.57
2342 3782 5.544621 ACTTTTCGAATTATTACGTCGTGC 58.455 37.500 8.47 0.00 36.21 5.34
2343 3783 9.514822 TTTTACTTTTCGAATTATTACGTCGTG 57.485 29.630 8.47 0.00 36.21 4.35
2344 3784 9.516091 GTTTTACTTTTCGAATTATTACGTCGT 57.484 29.630 2.21 2.21 36.21 4.34
2345 3785 9.514822 TGTTTTACTTTTCGAATTATTACGTCG 57.485 29.630 0.00 0.00 36.12 5.12
2354 3794 9.840427 CATGGTAGATGTTTTACTTTTCGAATT 57.160 29.630 0.00 0.00 0.00 2.17
2355 3795 9.010029 ACATGGTAGATGTTTTACTTTTCGAAT 57.990 29.630 0.00 0.00 0.00 3.34
2356 3796 8.385898 ACATGGTAGATGTTTTACTTTTCGAA 57.614 30.769 0.00 0.00 0.00 3.71
2357 3797 7.972832 ACATGGTAGATGTTTTACTTTTCGA 57.027 32.000 0.00 0.00 0.00 3.71
2358 3798 8.932791 ACTACATGGTAGATGTTTTACTTTTCG 58.067 33.333 10.17 0.00 33.76 3.46
2360 3800 8.932791 CGACTACATGGTAGATGTTTTACTTTT 58.067 33.333 10.17 0.00 33.76 2.27
2361 3801 8.308931 TCGACTACATGGTAGATGTTTTACTTT 58.691 33.333 10.17 0.00 33.76 2.66
2362 3802 7.833786 TCGACTACATGGTAGATGTTTTACTT 58.166 34.615 10.17 0.00 33.76 2.24
2363 3803 7.400599 TCGACTACATGGTAGATGTTTTACT 57.599 36.000 10.17 0.00 33.76 2.24
2364 3804 7.758528 AGTTCGACTACATGGTAGATGTTTTAC 59.241 37.037 10.17 0.54 33.76 2.01
2365 3805 7.833786 AGTTCGACTACATGGTAGATGTTTTA 58.166 34.615 10.17 0.00 33.76 1.52
2366 3806 6.698380 AGTTCGACTACATGGTAGATGTTTT 58.302 36.000 10.17 0.00 33.76 2.43
2367 3807 6.282199 AGTTCGACTACATGGTAGATGTTT 57.718 37.500 10.17 0.00 33.76 2.83
2368 3808 5.916661 AGTTCGACTACATGGTAGATGTT 57.083 39.130 10.17 0.00 33.76 2.71
2369 3809 5.448768 CGAAGTTCGACTACATGGTAGATGT 60.449 44.000 20.58 0.00 43.74 3.06
2370 3810 4.970611 CGAAGTTCGACTACATGGTAGATG 59.029 45.833 20.58 2.67 43.74 2.90
2371 3811 4.036498 CCGAAGTTCGACTACATGGTAGAT 59.964 45.833 26.37 0.00 43.74 1.98
2372 3812 3.376234 CCGAAGTTCGACTACATGGTAGA 59.624 47.826 26.37 0.00 43.74 2.59
2373 3813 3.488721 CCCGAAGTTCGACTACATGGTAG 60.489 52.174 26.37 4.93 43.74 3.18
2374 3814 2.424601 CCCGAAGTTCGACTACATGGTA 59.575 50.000 26.37 0.00 43.74 3.25
2375 3815 1.203994 CCCGAAGTTCGACTACATGGT 59.796 52.381 26.37 0.00 43.74 3.55
2376 3816 1.475280 TCCCGAAGTTCGACTACATGG 59.525 52.381 26.37 16.15 43.74 3.66
2377 3817 2.527100 GTCCCGAAGTTCGACTACATG 58.473 52.381 26.37 7.59 43.74 3.21
2378 3818 1.475682 GGTCCCGAAGTTCGACTACAT 59.524 52.381 26.37 0.00 43.74 2.29
2379 3819 0.883833 GGTCCCGAAGTTCGACTACA 59.116 55.000 26.37 2.44 43.74 2.74
2380 3820 1.135460 CAGGTCCCGAAGTTCGACTAC 60.135 57.143 26.37 18.53 43.74 2.73
2381 3821 1.171308 CAGGTCCCGAAGTTCGACTA 58.829 55.000 26.37 8.33 43.74 2.59
2382 3822 0.538977 TCAGGTCCCGAAGTTCGACT 60.539 55.000 26.37 14.80 43.74 4.18
2383 3823 0.388263 GTCAGGTCCCGAAGTTCGAC 60.388 60.000 26.37 16.59 43.74 4.20
2384 3824 0.824595 TGTCAGGTCCCGAAGTTCGA 60.825 55.000 26.37 4.58 43.74 3.71
2385 3825 0.388649 CTGTCAGGTCCCGAAGTTCG 60.389 60.000 18.40 18.40 40.07 3.95
2386 3826 0.037232 CCTGTCAGGTCCCGAAGTTC 60.037 60.000 11.09 0.00 0.00 3.01
2387 3827 1.481056 CCCTGTCAGGTCCCGAAGTT 61.481 60.000 17.85 0.00 31.93 2.66
2388 3828 1.913762 CCCTGTCAGGTCCCGAAGT 60.914 63.158 17.85 0.00 31.93 3.01
2389 3829 1.481056 AACCCTGTCAGGTCCCGAAG 61.481 60.000 17.85 2.97 40.05 3.79
2390 3830 1.460689 AACCCTGTCAGGTCCCGAA 60.461 57.895 17.85 0.00 40.05 4.30
2391 3831 2.203182 AACCCTGTCAGGTCCCGA 59.797 61.111 17.85 0.00 40.05 5.14
2392 3832 2.214216 TCAACCCTGTCAGGTCCCG 61.214 63.158 17.85 4.79 40.05 5.14
2393 3833 1.375326 GTCAACCCTGTCAGGTCCC 59.625 63.158 17.85 0.00 40.05 4.46
2394 3834 1.128188 AGGTCAACCCTGTCAGGTCC 61.128 60.000 17.85 11.06 44.08 4.46
2395 3835 0.321996 GAGGTCAACCCTGTCAGGTC 59.678 60.000 17.85 3.02 46.51 3.85
2396 3836 0.399949 TGAGGTCAACCCTGTCAGGT 60.400 55.000 17.85 3.27 46.51 4.00
2397 3837 0.035458 GTGAGGTCAACCCTGTCAGG 59.965 60.000 12.40 12.40 46.51 3.86
2398 3838 1.001406 GAGTGAGGTCAACCCTGTCAG 59.999 57.143 0.00 0.00 46.51 3.51
2399 3839 1.048601 GAGTGAGGTCAACCCTGTCA 58.951 55.000 0.00 0.00 46.51 3.58
2400 3840 1.048601 TGAGTGAGGTCAACCCTGTC 58.951 55.000 0.00 0.00 46.51 3.51
2401 3841 1.507140 TTGAGTGAGGTCAACCCTGT 58.493 50.000 0.00 0.00 46.51 4.00
2402 3842 2.638480 TTTGAGTGAGGTCAACCCTG 57.362 50.000 0.00 0.00 46.51 4.45
2404 3844 3.010420 GCTATTTGAGTGAGGTCAACCC 58.990 50.000 0.00 0.00 36.15 4.11
2405 3845 3.010420 GGCTATTTGAGTGAGGTCAACC 58.990 50.000 0.00 0.00 36.15 3.77
2406 3846 3.437049 GTGGCTATTTGAGTGAGGTCAAC 59.563 47.826 0.00 0.00 36.15 3.18
2407 3847 3.327757 AGTGGCTATTTGAGTGAGGTCAA 59.672 43.478 0.00 0.00 34.56 3.18
2408 3848 2.906389 AGTGGCTATTTGAGTGAGGTCA 59.094 45.455 0.00 0.00 0.00 4.02
2409 3849 3.618690 AGTGGCTATTTGAGTGAGGTC 57.381 47.619 0.00 0.00 0.00 3.85
2410 3850 3.838317 TGTAGTGGCTATTTGAGTGAGGT 59.162 43.478 0.00 0.00 0.00 3.85
2411 3851 4.184629 GTGTAGTGGCTATTTGAGTGAGG 58.815 47.826 0.00 0.00 0.00 3.86
2412 3852 4.184629 GGTGTAGTGGCTATTTGAGTGAG 58.815 47.826 0.00 0.00 0.00 3.51
2413 3853 3.580895 TGGTGTAGTGGCTATTTGAGTGA 59.419 43.478 0.00 0.00 0.00 3.41
2414 3854 3.684788 GTGGTGTAGTGGCTATTTGAGTG 59.315 47.826 0.00 0.00 0.00 3.51
2415 3855 3.326588 TGTGGTGTAGTGGCTATTTGAGT 59.673 43.478 0.00 0.00 0.00 3.41
2416 3856 3.937814 TGTGGTGTAGTGGCTATTTGAG 58.062 45.455 0.00 0.00 0.00 3.02
2417 3857 4.019771 TCATGTGGTGTAGTGGCTATTTGA 60.020 41.667 0.00 0.00 0.00 2.69
2418 3858 4.094887 GTCATGTGGTGTAGTGGCTATTTG 59.905 45.833 0.00 0.00 0.00 2.32
2419 3859 4.019321 AGTCATGTGGTGTAGTGGCTATTT 60.019 41.667 0.00 0.00 0.00 1.40
2420 3860 3.519510 AGTCATGTGGTGTAGTGGCTATT 59.480 43.478 0.00 0.00 0.00 1.73
2421 3861 3.107601 AGTCATGTGGTGTAGTGGCTAT 58.892 45.455 0.00 0.00 0.00 2.97
2422 3862 2.536066 AGTCATGTGGTGTAGTGGCTA 58.464 47.619 0.00 0.00 0.00 3.93
2423 3863 1.352083 AGTCATGTGGTGTAGTGGCT 58.648 50.000 0.00 0.00 0.00 4.75
2424 3864 3.118775 TCATAGTCATGTGGTGTAGTGGC 60.119 47.826 0.00 0.00 33.57 5.01
2425 3865 4.160439 AGTCATAGTCATGTGGTGTAGTGG 59.840 45.833 0.00 0.00 33.57 4.00
2426 3866 5.330455 AGTCATAGTCATGTGGTGTAGTG 57.670 43.478 0.00 0.00 33.57 2.74
2427 3867 6.436218 TGTTAGTCATAGTCATGTGGTGTAGT 59.564 38.462 0.00 0.00 33.57 2.73
2428 3868 6.863275 TGTTAGTCATAGTCATGTGGTGTAG 58.137 40.000 0.00 0.00 33.57 2.74
2429 3869 6.844097 TGTTAGTCATAGTCATGTGGTGTA 57.156 37.500 0.00 0.00 33.57 2.90
2430 3870 5.738619 TGTTAGTCATAGTCATGTGGTGT 57.261 39.130 0.00 0.00 33.57 4.16
2431 3871 8.893219 ATAATGTTAGTCATAGTCATGTGGTG 57.107 34.615 0.00 0.00 35.48 4.17
2432 3872 8.704668 TGATAATGTTAGTCATAGTCATGTGGT 58.295 33.333 0.00 0.00 35.48 4.16
2433 3873 9.201127 CTGATAATGTTAGTCATAGTCATGTGG 57.799 37.037 0.00 0.00 35.48 4.17
2434 3874 9.971922 TCTGATAATGTTAGTCATAGTCATGTG 57.028 33.333 0.00 0.00 35.48 3.21
2436 3876 9.636879 CCTCTGATAATGTTAGTCATAGTCATG 57.363 37.037 0.00 0.00 35.48 3.07
2437 3877 8.310382 GCCTCTGATAATGTTAGTCATAGTCAT 58.690 37.037 0.00 0.00 35.48 3.06
2438 3878 7.255977 GGCCTCTGATAATGTTAGTCATAGTCA 60.256 40.741 0.00 0.00 35.48 3.41
2439 3879 7.093992 GGCCTCTGATAATGTTAGTCATAGTC 58.906 42.308 0.00 0.00 35.48 2.59
2440 3880 6.014156 GGGCCTCTGATAATGTTAGTCATAGT 60.014 42.308 0.84 0.00 35.48 2.12
2441 3881 6.402222 GGGCCTCTGATAATGTTAGTCATAG 58.598 44.000 0.84 0.00 35.48 2.23
2442 3882 5.047306 CGGGCCTCTGATAATGTTAGTCATA 60.047 44.000 0.84 0.00 35.48 2.15
2443 3883 4.262635 CGGGCCTCTGATAATGTTAGTCAT 60.263 45.833 0.84 0.00 38.57 3.06
2444 3884 3.069586 CGGGCCTCTGATAATGTTAGTCA 59.930 47.826 0.84 0.00 0.00 3.41
2445 3885 3.321111 TCGGGCCTCTGATAATGTTAGTC 59.679 47.826 0.84 0.00 0.00 2.59
2446 3886 3.305720 TCGGGCCTCTGATAATGTTAGT 58.694 45.455 0.84 0.00 0.00 2.24
2447 3887 4.058817 GTTCGGGCCTCTGATAATGTTAG 58.941 47.826 0.84 0.00 0.00 2.34
2448 3888 3.709653 AGTTCGGGCCTCTGATAATGTTA 59.290 43.478 0.84 0.00 0.00 2.41
2449 3889 2.505819 AGTTCGGGCCTCTGATAATGTT 59.494 45.455 0.84 0.00 0.00 2.71
2450 3890 2.119495 AGTTCGGGCCTCTGATAATGT 58.881 47.619 0.84 0.00 0.00 2.71
2451 3891 2.918712 AGTTCGGGCCTCTGATAATG 57.081 50.000 0.84 0.00 0.00 1.90
2452 3892 5.568620 AAATAGTTCGGGCCTCTGATAAT 57.431 39.130 0.84 0.00 0.00 1.28
2453 3893 5.601313 ACTAAATAGTTCGGGCCTCTGATAA 59.399 40.000 0.84 0.00 31.13 1.75
2454 3894 5.145564 ACTAAATAGTTCGGGCCTCTGATA 58.854 41.667 0.84 0.00 31.13 2.15
2455 3895 3.967987 ACTAAATAGTTCGGGCCTCTGAT 59.032 43.478 0.84 0.00 31.13 2.90
2456 3896 3.371965 ACTAAATAGTTCGGGCCTCTGA 58.628 45.455 0.84 0.00 31.13 3.27
2457 3897 3.132289 TGACTAAATAGTTCGGGCCTCTG 59.868 47.826 0.84 0.00 36.50 3.35
2458 3898 3.371965 TGACTAAATAGTTCGGGCCTCT 58.628 45.455 0.84 0.00 36.50 3.69
2459 3899 3.383825 TCTGACTAAATAGTTCGGGCCTC 59.616 47.826 0.84 0.00 36.50 4.70
2460 3900 3.371965 TCTGACTAAATAGTTCGGGCCT 58.628 45.455 0.84 0.00 36.50 5.19
2461 3901 3.814005 TCTGACTAAATAGTTCGGGCC 57.186 47.619 0.00 0.00 36.50 5.80
2462 3902 4.032558 CGTTTCTGACTAAATAGTTCGGGC 59.967 45.833 0.00 0.00 36.50 6.13
2463 3903 5.404946 TCGTTTCTGACTAAATAGTTCGGG 58.595 41.667 0.00 0.00 36.50 5.14
2464 3904 6.939551 TTCGTTTCTGACTAAATAGTTCGG 57.060 37.500 0.00 0.00 36.50 4.30
2465 3905 6.948777 GCTTTCGTTTCTGACTAAATAGTTCG 59.051 38.462 0.00 0.00 36.50 3.95
2466 3906 6.948777 CGCTTTCGTTTCTGACTAAATAGTTC 59.051 38.462 0.00 0.00 36.50 3.01
2467 3907 6.818416 CGCTTTCGTTTCTGACTAAATAGTT 58.182 36.000 0.00 0.00 36.50 2.24
2468 3908 6.390987 CGCTTTCGTTTCTGACTAAATAGT 57.609 37.500 0.00 0.00 39.71 2.12
2485 3925 6.134061 AGTATTTTCAAAGTTCGACGCTTTC 58.866 36.000 10.23 0.75 34.32 2.62
2486 3926 6.056428 AGTATTTTCAAAGTTCGACGCTTT 57.944 33.333 7.99 7.99 36.70 3.51
2487 3927 5.668558 AGTATTTTCAAAGTTCGACGCTT 57.331 34.783 0.00 0.00 0.00 4.68
2488 3928 5.668558 AAGTATTTTCAAAGTTCGACGCT 57.331 34.783 0.00 0.00 0.00 5.07
2582 4022 7.111247 TGAAACTTGTGAACATTCCTGAAAT 57.889 32.000 0.00 0.00 0.00 2.17
2583 4023 6.522625 TGAAACTTGTGAACATTCCTGAAA 57.477 33.333 0.00 0.00 0.00 2.69
2584 4024 6.522625 TTGAAACTTGTGAACATTCCTGAA 57.477 33.333 0.00 0.00 0.00 3.02
2585 4025 6.522625 TTTGAAACTTGTGAACATTCCTGA 57.477 33.333 0.00 0.00 0.00 3.86
2586 4026 7.593875 TTTTTGAAACTTGTGAACATTCCTG 57.406 32.000 0.00 0.00 0.00 3.86
2648 4088 5.046663 CCTGTTAAGGGTATGGCATGTTTTT 60.047 40.000 10.98 2.56 40.27 1.94
2649 4089 4.466015 CCTGTTAAGGGTATGGCATGTTTT 59.534 41.667 10.98 2.20 40.27 2.43
2650 4090 4.023291 CCTGTTAAGGGTATGGCATGTTT 58.977 43.478 10.98 1.85 40.27 2.83
2651 4091 3.268334 TCCTGTTAAGGGTATGGCATGTT 59.732 43.478 10.98 1.05 44.62 2.71
2652 4092 2.849943 TCCTGTTAAGGGTATGGCATGT 59.150 45.455 10.98 0.00 44.62 3.21
2653 4093 3.576078 TCCTGTTAAGGGTATGGCATG 57.424 47.619 10.98 0.00 44.62 4.06
2660 4100 5.847265 TGCCATGTATATCCTGTTAAGGGTA 59.153 40.000 0.00 0.00 43.59 3.69
2661 4101 4.663120 TGCCATGTATATCCTGTTAAGGGT 59.337 41.667 0.00 0.00 44.62 4.34
2662 4102 5.241403 TGCCATGTATATCCTGTTAAGGG 57.759 43.478 0.00 0.00 44.62 3.95
2663 4103 7.394016 TGTATGCCATGTATATCCTGTTAAGG 58.606 38.462 0.00 0.00 46.06 2.69
2664 4104 8.846943 TTGTATGCCATGTATATCCTGTTAAG 57.153 34.615 0.00 0.00 0.00 1.85
2665 4105 9.634021 TTTTGTATGCCATGTATATCCTGTTAA 57.366 29.630 0.00 0.00 0.00 2.01
2666 4106 9.806448 ATTTTGTATGCCATGTATATCCTGTTA 57.194 29.630 0.00 0.00 0.00 2.41
2667 4107 8.710749 ATTTTGTATGCCATGTATATCCTGTT 57.289 30.769 0.00 0.00 0.00 3.16
2668 4108 9.806448 TTATTTTGTATGCCATGTATATCCTGT 57.194 29.630 0.00 0.00 0.00 4.00
2720 4160 9.849166 TCTTTGTTCTTTTTGTATTCGTTTTCT 57.151 25.926 0.00 0.00 0.00 2.52
2747 4187 1.490621 GTGCGCATTGCTCTGTTTTT 58.509 45.000 15.91 0.00 46.63 1.94
2748 4188 0.661187 CGTGCGCATTGCTCTGTTTT 60.661 50.000 15.91 0.00 46.63 2.43
2749 4189 1.081906 CGTGCGCATTGCTCTGTTT 60.082 52.632 15.91 0.00 46.63 2.83
2750 4190 2.557805 CGTGCGCATTGCTCTGTT 59.442 55.556 15.91 0.00 46.63 3.16
2751 4191 4.093952 GCGTGCGCATTGCTCTGT 62.094 61.111 24.83 0.00 46.63 3.41
2774 4214 3.272334 GGCCCATTAGCGCAGTCG 61.272 66.667 11.47 0.00 39.07 4.18
2775 4215 3.272334 CGGCCCATTAGCGCAGTC 61.272 66.667 11.47 0.00 0.00 3.51
2776 4216 4.856801 CCGGCCCATTAGCGCAGT 62.857 66.667 11.47 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.