>input_sequence_68546
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----------------------------------------------------------------ATGGCGGACCGCGTCC
ACCCCGCGCCACTGCTGCCACTCTCCACCCCACCTGCCCCGCCGACTGACAACAGAGACGCGGCCGCGGAGAACGCGCCG
CTGCGCTCCACA------------GCGGCGGCGCCGGGCGCGTCGTACGTCGTGCATGTGCCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGC---------------AAGCTCGCCGCGCGGACGGCCCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCGTGCTGCGCGCTCCTCCTCCTGCTCGTCCTCGCCGCGGCGTTCGTCGGCGCCGTCTACCTCGTCCTCCGC
CCTAGGGCGCCCTCCTTCTCCGTCACATCCCTCTCCGTCGCCGGCCTCCTCGACCCCTCCC---------CCG-------
--CGCAGCTCGACGCCGCCGTGCGCGCGGACAACGGCGCCAACAGGAAGGTCGGCGTGGACTACCGCGGCGGCGGCGAGG
TCAGCGTCTCCTACTCCGGCGTCCTCCTCGCGACGGGCCGCTGGCCGGCCTTCTACCAGGCGCCGAGGAACGTGACGCTG
ATCTCGATGCCGCTCACCGGGAGGGAC------GGCGTGGCCCTCACGGACGATCAGAGGGGGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCGAGGTCACGGTGGACAGGATCGACGGCGAGACGACGGCCGCCAACAGGGGGTGCAGG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGA-----------------------------------------------
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>chr2A_1_TraesCS2A01G489300
TTGTAGCATGTGTGTGCATCCTCACACGCTTTTCCTACTTTCATAGATG-----C-------------------------
------CCCTATTGGTTTGGAACACCAAACTTGCACACAAGGACCTACTGTACTAACTACGTACATTGCCTATGGATCTA
TCGAGTCATAGTCAAGGTGGTTG--------TGTTACCTTGTGTATGCATAAAAATCCTCATCTGGGGCACGAGCACAAT
TGGTTTTGTGCCAAAATTGGCATTGCCAGTGTTTGGTATTGTGCCAAATATTAACTACTACTTGGTTGGTTATCGAGTTG
CCTTGTATATCTCACACAGAGTTGCCAATAATTGACAAGTATTGGTATTTGCCAACATTTGGCAATGCCAACATTTCGCT
AATCAAATATTGACAGTGAACCAATCATGCTCTACATCCATGCATT-----TACA---TATCCCGATTTGAAAACCTGTT
ATTGCAAGCATTGCAAGACAAGACGATACCAG-----------------GAGCGGAGTAGGGTAGAGGCACCGTTGT-GT
ACACTTGAGATATTCGTTCATTTGTTCCACAGAAGAATCGGTTTGCTTCTGGAACCGCGGGTAATCCCCTCCGAATATTC
AGGTCTCTGTCTAGCTCACAAGTCAGTTAACCCGTA------------------CGTGTTCTCTCACGCTTCCTTCCAC-
---GACGACTTGCTTTCGGGACAGACGACGTACCGGGTTGGAGTGGTTA-------------------------------
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---CAAGCTTAG-----------------------------------------------CTTAATCGATTAAATGGCGCG
AGTTTTA-TACGTTTAAAAAGTGAAGTTGTTTCTTGAAACACGAGAAAAAAGAAACG-AAATCAAACGGCGGGCGGCAAC
T-CCGACTCACAGCCTCGTCTGGTCTCGTCTCAAAAGCAGCACGAAAAAGAAGTACGTAGCCAGGT-------T-----T
GAACAGCGTGTGGAGGT---------------------------------------------CTCCAG--TCT-------
ATACATAATAAGACCCCACCTAGCTGCTCTCATCAGCCCACACTCTTT-----TCTCGTCT-----CCCCGATCGAGCTT
CAGTCA----CACACCCAACCCACCT------CGCAGGCGACGCGACTCGGCAACTCCAGC--CATGGCGGACCGCGTCC
ACCCCGCGCCACTGCTGCCACTCTCCACCCCACCTGCCCCGCCGACTGACAACAGAGACGCGGCCGCGGAGAACGCGCCG
CTGCGCTCCACA------------GCGGCGGCGCCGGGCGCGTCGTACGTCGTGCATGTGCCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGC---------------AAGCTCGCCGCGCGGACGGCCCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCGTGCTGCGCGCTCCTCCTCCTGCTCGTCCTCGCCGCGGCGTTCGTCGGCGCCGTCTACCTCGTCCTCCGC
CCTAGGGCGCCCTCCTTCTCCGTCACATCCCTCTCCGTCGCCGGCCTCCTCGACCCCTCCC---------CCG-------
--CGCAGCTCGACGCCGCCGTGCGCGCGGACAACGGCGCCAACAGGAAGGTCGGCGTGGACTACCGCGGCGGCGGCGAGG
TCAGCGTCTCCTACTCCGGCGTCCTCCTCGCGACGGGCCGCTGGCCGGCCTTCTACCAGGCGCCGAGGAACGTGACGCTG
ATCTCGATGCCGCTCACCGGGAGGGAC------GGCGTGGCCCTCACGGACGATCAGAGGGGGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCGAGGTCACGGTGGACAGGATCGACGGCGAGACGACGGCCGCCAACAGGGGGTGCAGG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCGGCGTGAAC----ACCATGCACGGAGGATCTTTGATA
AGATCACGGAGTCTAAAAACCCGACCGAGATAGCCTACTACTCTCACAGACAAGAGTTTGGGCCGGCCCCCTATAACAAA
GCAAGAATTCGTGAGGTCTAAAAAATGTCCGTGCATTTCTAAAATTGTCCAAAAGTTAAAACAAAATGTCCTGTTTTCTA
TTTCTGGCACAAATTCAATTCCTTTTGTGTTTTTCAGAAAATATTTGGAATTTTGAAATACTATTCGCATTTTTAAAACT
GTTCGTGGTTTTACAAAATCAAGAAAATTCAGAATTCCAAAAAAAATTCACATACTATGAAGAAGGTTTCGGATTTTCAA
AATTGTCTTATATTTTCAATATAATGTTTTTGTAATTTCATAAATTATTTTGTAAATAATGTTTTTAAAAAATGTTTCGG
ATTGTTGGCTGCGGACTAGACTGGGCCGCCCCACCAGATATGAAGCGAGTTTTTTTTTTCTTAACACATGACGTGAAAAT
TATTTCTTTCTTTTCTTTAATGCACGACGTAATAATTCGAAAAGTAAAACATCTACCATGTAGTCGAACTTCGGGACCTG
ACAGGGTTGACCTCACTCAAATAGCCACTACACCACATGACTATGACTAACATTATCAGAGGCCCGAACTATTTAGTCAG
AAACGAAAGCGTCGAACTTTGAAAATACTTTTTAGGGATTTTTTTAACATATTTTTTTGGTACATTCCAAAAAATGATTC
GTACATTCCAAAAAATGTAACATTTCAGGAATGTTCACAAGTTTCAAAAAATATATGTAGAATGTAAAAAAAGTTTGTGT
GTTGTAAAAAAACATGCCATACCCTTAACAGGATATACATGGCATACAAAATAAAAAATGTTGAATCATGTAAAAGAAAA
GAAAACGAATACAAAAAGAACAAAGAAAAAACAGAGCAATGCGCACGCGCGAGCGACTGCGCTAATGGGCCGGCCCG
>chr2A_1
TTGTAGCATGCGTGTGCATCCTCACACGCCTTTCCTACTTTCATAGATG-----C-------------------------
------TTCTTTTGGTTTGGAACGCCAAACTTGCACACAAGGACCTATTGTACTAACTACGTACATTGCCCATAGATCTA
TCTAGTCATAGTTAAGGTGGTTG--------TGTTTCCTTGTGTACGCACAGAAATTCTCATCTGGTGTACGAGCACAAT
TGGTTTTGTGTCAAAATTGGCATTGCCAGTGTTTGGTATTGTGCCAAATATTGACTACTACTTAGTTGGT--TCGAGTTG
CCTTGCATATCTCATACAAAGTTGCCAATAATTGATAAGTATTGGTATTTGCCAACATT----------------TCGCT
AGTCAAATATTGACAATGAACCAATCATGCTCTACATCCATGCATT-----TACA---TATCTCGATTTGAAAACCTGTT
ATTGCAAGCATTGCAAGACAAGACGATACCTG-----------------GAGCACAGTAGAGTAGAGGCACCGTTGT-GT
ACACTTGAGATATTCATTCATTA-TTCCACAGAAGAATCGCTTTGCTTCTGGAACCGCGAGTAATCCCCTCCGAATATTC
AGGCCTCTGTCTAGCTCACAAGTCAGTTAACCCGTA------------------CATGTTCTCTGACGCTTTCTTTCAC-
---GACGCCTTGCCTTCAAGACAGACAACGTACCGGGTTAGAGTGGTTAGAGCATCTATAGCCCGACCTCTCAATCCGTC
TCATACCTTTAGATGGACTGTCCGGTCATGATTTTTAAACGGGCCCCTCAAACGGTCATCAAACGGCTCTCAAACGTTCG
GGTTGACCGACATTTTCCATATCCAGCCAAGTATGGGGCGGATAAGGAGGAGCCCAGGCACGCCCGCCATGTCGGACCCG
GCGCACGTTGGCTCATCCGACCCCACATAAAATCCTTCTCATTCGCTCGCGAGACCAAACCTTAGCCACTTCACTCTCCT
CTCCTCCGTCACCCGGGCTCGTCTCCGGCTCCTTCCGGTCGTCTCCGGCATGGCGGGCAGCGAATCCGAGTCCGTCACCT
CCGGATCTGTCGACTCCGAACTCATCCCACGCGGCCCCAAGAAGGAGATGGCCATCCGGCTTGTGCTCTGCCGCGCCCGA
GAGGAGGCCCATGCATGGCTGCGCTCGCACTCCATCCGTCGGGAATCCATTGCATCCACACAAATGACGCATGGATCCGG
CGCTAGGCCGGCCGTAGCTGCCTCGCCGGAGGCCGTGCGGTCTGTCTGGCGTCCGAACACATTGACGGACGCGCAACCCC
TCCGGTGGCGCGCCGATATTCGGGACGCACCATCGTCCCACGAGGCCATGGCACAACGTGCCTGCCGTGCAAGGCACCGG
GCGCGGGAGACGGCGGCAGCTCTCGTGACGGCGGACGTCGTCGAGGAGGAGTCCCATTCTTCAGTGCCCAGTATGGCATA
TCAGCCTGGGCGCCGCAACCGCATCGTGGTGGACGTCGGCAGTTCGCCCCCGGACGGATCCGTCATCGATCTGACGTCCA
CCGGCACCGTTCGAGTTTCGGTCTCCGACGAGAAAGAGTAGGGCATGGGAGACGACGAAGCCTTGAGTCCCGTAAGCCGG
CTCGTATCTCATGCCCCACCCTACCTTGCCGGCGACCGGACAAACATTCTGAGGAGCGCAGCCGGCCGCCGGACATGGCA
AGGGCAAAGCCGGACGAGCGAAACCGGACGAAGCTCCGCTCAAAGAACGTTGTGTTGCATATAATAATATGAATTTGAGA
TTTTTAATTTGAAATATCTGGATGTAAAATGCGTTTTTTGAGGGGTCCGCTAGAATTGCCAAGTTCGGCCGTAGATGCTT
TTTCAAGTTTAG-----------------------------------------------CTTAATCGATCAAATGACGTG
AGTTTTA-T--GTTTAAAAAGTGAAGTTGTTTCTTGAAACACGAGAAAAAGA-AAAAAAAATCAAACGGCGGCAACTCCG
ACTG-----GCAGCCTC-----GTCTCGTCTCAAAAGCAGCACGGAAAAGAAGTAGCCAGGT----------------TT
GAACAGCGTGTGGCGACCGTTTCCCACGTGTCCCTTTCGGCTTCGTCTCCACGCGCTACCTCCTCAGTCTATATCTATAC
ATAAATAAGA----CCCAGCTAGCAG--CTCATCAGCTCACACTCTTCTCTCGA-TCGTCT-----CCCCGATCGAGCTT
CAGTCA----CACACCCAACCCACCGCGCAGCCGCAGGCGAGGCGACTCGGCAACTCCAGC--CATGGCGGACCGCGTCC
ACCCCGCGCCGCTGCTGCCACTCTCCATCCCACCTGCCCCGCCAACTGACAACAGCGTCGCGGCCGCGGAGACAGCGCCG
CTGCGCTCCACA------------GCGGCGGCGCCGGGCGCGTCGTACGTCGTGCATGTGCCCAAGGACCAGGCGCTCCG
GGTCCCGCCCCCGGACCGC---------------AAGCTCGCCGCGCGGCCGGCCCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCGTGCTGCGCGCTCCTCCTCCTGCTCGTCCTCGCCGCGGCGTTCGTCGGCGCCGCCTACCTCGTCTTCCGC
CCCAGGGCGCCCTCCTTCTCCGTCACGTCCCTCTCCGTCGCCGGCCTCCTCGACCCATCCC---------CCG-------
--CGCAGCTCGACGCCGCCGTGCGCGCGGACAACGGCGCCAACAGGAAGGTCGGCGTGGACTACCTCGGCGGCGGCGAGG
TCAGCGTCTCCTACTCCGGCGTCCTCCTCGCGACGGGCCGCTGGTCGGCCTTCTACCAGGCGCCGAGGAACGTGACGCTG
ATCTCGATGCCACTCTCCGGGAGGGACGGCGTGGGTGTGGCCCTCACGGACGATCAGAGGGGGCGGCTGGCGGAGCAGGC
CGCTGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCGAGGTCACGGTGGACAGGATCGACGGCGAGACGACGGCCGCCAACAGGGGGTGCAGG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCGGCGTGAAC----ACCATGCACGGAGGATCTTTGATA
AGATCACGG-----------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr4B_1
TTGTAGCATGCGTGTGCATCCTCACACGCTTTTCCTACTTTCATAGATGGCCCTTTTTATTTTTATTTCTATTTTGGAAG
TGATGTCCCGTTTGATTTGGAACGCGAGACTTGCACACAAGGACCTA-----CTAACTACGTACATGGCCTATGTA---A
TCTAGTCATAGTCAGGGTGGTTG--------CGTTTCCTTGTCTACGTAG-AAAATCCTCATCTGGTGCACATACGC---
--------------------------------------------------------------------------------
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-----------------------------------------GCATTCCCTTTACAAACCATCCCGAACTGAAAACCTGTT
ATTACAAGCATTGCAAGACAAGACGACACCGGGACCGGGAGGGAAAGCAGAGCAGAGTGGAGTAGAGGCACCGTTGTTGT
ACACTTAAGATATTCGTTAATTA-TTCCACAGAAAAATCACTTTCCTTCTGGAACCGCGAGTGATCCCCTCCGAATATTC
AGGTCTCTGTCAAGCTCATG----AGTTAACCCGTA------------------CGTGTTCTCTGACGCTTTCTTCCTTT
CAAGACGACTTGCTTTCGAGACAGACGACGGCGTTTGAGC----------------------------------------
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---------TAG-----------------------------------------------CTTAATCGATCAAATGGTGCA
GGT-----TATGTTAAAAAGGAGAAGCTGTTTCTTGAAACACGAGAAAAAGA-AACG-AAATCAAACGGCGGCAACCCCG
ACTCGACTCGCAGCCTC-----GCCTCGTCTCAAAAGCAGCACCAAAAAGAAGTACC---CCAGGT-------TTGAATT
GAACAGCGTGTGGCGACCGTTTCCCACGTGTCCCTTTCGGTTTCGTCTCCACGCGCTACCTCCTCCAG--TCT-------
ATACATAAGA----CCCAGCTAGCAG--CTCATCAGCTCACACTCTTCTCC-----CGTCTCGTCTCCCCGATCGAGCTT
CAGTCAGACGCACACCTCACTG-----GCG-----AGGCGCGGCGACCCAGCAACTCCACC--CATGGCGGACCGCGTCC
ACCCCGCGCCGCTGCTGCCGCTCTCCACCCCACCTGCTCCGCCAACCGACAACAGCGACGCGGCCGCGGAGACCGCGCCG
CTGCGCTCCGCAACACCGGCAGCGGCGGCGGCGCCGGGCGCGTCGTACATCGTGCATGTGCCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGCGCGCGCAGGTACCGCAAGCTCGCCGCGCGGCCGGCCCGGCGCCGCATGCTCCGCCGCGCAT
GCTGCGGCGCCTGCTGCGCGCTCCTCCTCCTGCTCGTCCTCGCCGCCGCGTTCGTCGGCGCCGTCTACCTCGTCTTCCGC
CCCAGGGCGCCCTCCTTCACCGTCACGTCCCTCTCCGTCGCCGGCCTCCTCGACCCCTCCC---------CCG-------
--CGCGGCTCGACGCCGCCGTGCGCGCGGACAACGGCGCCAACAAGAAGGTCGGCGTGGACTACCGCGGCGGCGGCGAGG
TCAGCGTCTCCTACTCCGGCATCCTCCTCGCGACGGGACGGTGGCCGGCCTTGTACCAGGCGCCGAGGAACGTGACGCTC
ATCTCGATGCCGCTCACCGGGAGGGAC------GGCCTGGCCCTCACGGACGACCAGAGGGCGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCTGGCGCGGGTGAGGCTCGGGAAGGTCCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCGAGGTCACGGTGGACAGGATCGACGGCGAGACCACGGCCGCCAACAGGGGGTGCACG
GTGAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCCAGGGCGGCGTGAACCATGCACGGAGGCTCTTTGATA
AGATCACG------------------------------------------------------------------------
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>chr4D_1
TTGTAGCATGCGTGTGCATCCTCACACGCTTTTCCTACTTTTATAGATGGCCCTC-------------------------
------CCCTTTTGATTCGGAACGCGAGACTTGCACACAAGGACCTA--GTACTAACTACGTACATTGCCT----ATGTA
TCTAGTCGTAGTCAGGGTGGTTG--------CGTTTCCTTGTCTAGGAAG-AAAATCCTCATCTGGTGCACATACGC---
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-----------------------------------------GCATT-----TACAAACTATCCCGAACTGAAAACCTG-T
ATTACAAGCATTACAAGACAAGACGAGACCGG-----------------GAGCAGAGTAGAGTAGAGGCACCGTTGTTGC
ACACTTAAGATATTCGTTCATTA-TTCCACAGAT-AATCGTTTTGCGTCTGGAACCGCGAGTAATGCCCTCCGAATATTC
AGGTCTCTGTCAAGCTCGGATGTTACCCGCAAAAAAAAAACTCGGATGTTAACCCGTGTTTTCTGACGCTTTCTTCCAC-
---GACGACTTGCTTTCGAGACACACGACGGCGTTTGAGC----------------------------------------
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---------TATGAGTTTATGTTAGGTTTTTTTTTTGCGGTTGAGTTTATGCTAGCTTAATTAATCGATCAAATGGTGCA
AGT-----TATGTTAAAAAAGTGAAGTTGTTTCTTGAAGCACGAGAAAAAGA-AACG-AAATCAAACGGCGGCAACCCCG
ACTCGACTCGCAGCCTC-----ATCTCGTCTCAAAAGCAGCACGAAAAAGAAGTACC---CCAGGT-------T-----T
GAACAGCGTGTGGCGACCGTTTCCCACGTGTCCCTTTCG------TCTCCACGCGC----TCCCCCAG--TGT-------
ATACATAGACCCAGCCCAGCTAGCAG--CTCATCAGCTCACACTCTTCTCC-----CGTCT-----CCCCGATCGAGCTT
CAGTCA----CACACCTCACAG-----GCG-----AGGCGAGGCGACCCAGCAACTCCGCCCTCATGGCGGACCGCGTCC
ACCCCGCGCCGCTGCTGCCGCTCTCCACCCCACCCGCTCCGCCAACCGACAACAGCGACGCGGCCGCGGAGACCGCGCCG
CTGCGCTCCACAATAGCGGCGCCGGCGCCGGCGCCGGGCGCGTCGTACATCGTGCATGTGCCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGCGCGCGCAGGTACCGCAAGCTCGCCGCGCGGCCGGCCCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCCTGCTGCGCGCTCCTCCTCCTGCTCGTCCTCGCCGCCGCGTTCGTGGGCGCCGTCTACCTCGTCTTCCGC
CCCAGGGCGCCCTCCTTCTCCGTCACGTCCCTCTCCGTCGCCGGCCTCCTCGACGCCTCCC---------CCG-------
--CGCAGCTCGACGCCGCCGTGCGCGCGGACAACGGCGCCAACAAGAAGGTCGGCGTGGACTACCGCGGCGGCGGCGAGG
TCAGCGTCTCCTACTCCGGCTTCCTCCTCGCCACGGGCCGCTGGCCGGCCTTCTACCAGGCACCGAGGAACGTGACGCTC
ATCTCGATGCCGCTCACCGGGAGGGAC------GGCCTGGCCCTCACGGACGACCAGAGGGCGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CTGTGGACGTGTGGGCGCGGTGCGAGGTCACGGTGGACAGGATCGACGGCGAGACCACGGCCGCCAACCGGGGGTGCACG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCCAGGGCGGCGTGAACCATGCACGGAGGCTCTTTGATA
AGATCACG------------------------------------------------------------------------
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>chrUn_1
TTGTAGCATGCGTGTGCATCCTCACACGCTTTTCCTACTTTCATAGATGGCCCTC-------------------------
------CCTTTTTGATTTGGAACGCGAGACTTGCACACAAGGACCTA--GTACTAACTACAGT------------ATTTA
CATTGTCGTAGTCAGGGTGGTTACTTGCACACGTTTCCTTGTCTATGAAG-AAAAACCTCATCTGGTGCACATACGC---
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-----------------------------------------GCATT-----TACAAACCTCATCTGGTGTAC--------
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----------------------------------TA------------------CGTGTTCTCTGACGCTTTCTTCCAC-
---GGCGACTTGCTTTCGAGACAGACGACGTACCGGGTTGGAGTGGTTA-------------------------------
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---CAAGCTTAG-----------------------------------------------ATTAATCGACCAAATGACGCG
AGTTTTAATAAGTTTAAAAAAAAAG---------TGAAACACGAGAAAAAGAAAACG-AAATCAAACGGCGGCAACCCCG
ACCCGACTCGCAGC----------CTCGTCTCAAAAGCAGCACCAAAAAGAAAAGAAACACTCCAGGTTTGAAT-----T
GAACAGCGTGTGGCGACCGTTTCTCACGTGTCCCTTTCGGCTTCGTCTCCACGCGCTACCTCCTCCAGTCTCT-------
ATACATAAGA----CCCAGCTAGCAG--CTCATCAGCTCACACTCTCCTCCCGTCTCGTCT-----CCCCGATCGAGCTT
CAGTCA----CACACCTCACAGCCGAGGCG-----AGGCGAGGCGACCCAGCAACCCCACC--CATGGCGGACCGCGTCC
ACCCCGCGCCGCTGCTGCCGCTCTCCACCCCACCCGCCCCGCCACCCGACAACAGCGACGCGGCCGCGGAGAACACCCCG
CTGCGCTCCACCA------CAGCGGCGGCGGCGCCGGGCGCGTCGTACATCGTGCATGTACCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGCGCGCGCAGGTACCGCAAGCTCGCCGCGCGGCCGGCGCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCGTGCTGCGCGCTCCTCCTCCTGCTCCTCCTCGCCGCCGCGTTCGTCGGCGCCGTCTACCTCGCCTTCCGC
CCCCGGGCGCCCTCCTTCTCCGTCACGTCCCTCTCCGTCGCCGGCCTCCTCGACGCCTCCC---------CCG-------
--CGCGGCTCGATGCCGCCGTGCGCGCGGACAACGGCGCCAACAGGAAGGTCGGCGTGGACTACCGCGCCGGCGGCGAGG
TCAGGGTCTCCTACTCCGGCGTCCTCCTCGCCACGGGCCGCTGGCCGGCCTTCTACCAACCGCCGAGGAACGTGACGCTC
ATCTCCATGCCGCTCACCGGGAGGGAC------GGCCTGGCCCTCACGGACGACCAGAGGGCGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCCAGGTCACGGTGGACAGGATCGACGGCGAGACCACGGCCGCCAACCAGGGGTGCACG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCCAGGGCGGCGTGAACCAAGCACGGAGGCTCTTTGATA
AGATCACGGAATCCAA----------------------------------------------------------------
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-----------------------------------------------------------------------------
>chrUn_1
TTGTAGCATGCGTGTGCATCCTCACACGCTTTTCCTACTTTCATAGATGGCCCTC-------------------------
------CCTTTTTGATTTGGAACGCGAGACTTGCACACAAGGACCTA--GTACTAACTACAGT------------ATTTA
CATTGTCGTAGTCAGGGTGGTTACTTGCACACGTTTCCTTGTCTATGAAG-AAAAACCTCATCTGGTGCACATACGC---
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-----------------------------------------GCATT-----TACAAACCTCATCTGGTGTAC--------
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----------------------------------TA------------------CGTGTTCTCTGACGCTTTCTTCCAC-
---GGCGACTTGCTTTCGAGACAGACGACGTACCGGGTTGGAGTGGTTA-------------------------------
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---CAAGCTTAG-----------------------------------------------ATTAATCGACCAAATGACGCG
AGTTTTAATAAGTTTAAAAAAAAAG---------TGAAACACGAGAAAAAGAAAACG-AAATCAAACGGCGGCAACCCCG
ACCCGACTCGCAGC----------CTCGTCTCAAAAGCAGCACCAAAAAGAAAAGAAACACTCCAGGTTTGAAT-----T
GAACAGCGTGTGGCGACCGTTTCTCACGTGTCCCTTTCGGCTTCGTCTCCACGCGCTACCTCCTCCAGTCTCT-------
ATACATAAGA----CCCAGCTAGCAG--CTCATCAGCTCACACTCTCCTCCCGTCTCGTCT-----CCCCGATCGAGCTT
CAGTCA----CACACCTCACAGCCGAGGCG-----AGGCGAGGCGACCCAGCAACCCCACC--CATGGCGGACCGCGTCC
ACCCCGCGCCGCTGCTGCCGCTCTCCACCCCACCCGCCCCGCCACCCGACAACAGCGACGCGGCCGCGGAGAACACCCCG
CTGCGCTCCACCA------CAGCGGCGGCGGCGCCGGGCGCGTCGTACATCGTGCATGTACCCAAGGACCAGGTGCTCCG
GGTCCCGCCCCCGGACCGCGCGCGCAGGTACCGCAAGCTCGCCGCGCGGCCGGCGCGGCGCCGCATGCTCCGCCGCGCCT
GCTGCGGCGCGTGCTGCGCGCTCCTCCTCCTGCTCCTCCTCGCCGCCGCGTTCGTCGGCGCCGTCTACCTCGCCTTCCGC
CCCCGGGCGCCCTCCTTCTCCGTCACGTCCCTCTCCGTCGCCGGCCTCCTCGACGCCTCCC---------CCG-------
--CGCGGCTCGATGCCGCCGTGCGCGCGGACAACGGCGCCAACAGGAAGGTCGGCGTGGACTACCGCGCCGGCGGCGAGG
TCAGGGTCTCCTACTCCGGCGTCCTCCTCGCCACGGGCCGCTGGCCGGCCTTCTACCAACCGCCGAGGAACGTGACGCTC
ATCTCCATGCCGCTCACCGGGAGGGAC------GGCCTGGCCCTCACGGACGACCAGAGGGCGCGGCTGGCGGAGCAGGC
CGCGGCGGGCGCCGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGCGGGTGAGGCTCGGGAAGGTGCTGCGGACGTGGA
CCGTGGACGTGTGGGCGCGGTGCCAGGTCACGGTGGACAGGATCGACGGCGAGACCACGGCCGCCAACCAGGGGTGCACG
GTCAAGGCCAAGCCGCTCTGGTGGTGGTGGTGATCGCCGGGGCCAGGGCGGCGTGAACCAAGCACGGAGGCTCTTTGATA
AGATCACGGA----------------------------------------------------------------------
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>chr5B_1110
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-------------------------CGGCGCCGCCGCCCGGGACGTACATCGTCCAGATTCCCAAGGACCAGGTCCTCCG
CGTGCCGCCCTCCGACCGGGCCAGCCGGTACAAGAGTCTCGCGGAGCGCCCGGTCCGGCGCCGTCGCCTGCGCCGCGCCT
GCTTCGGCGCCTTCGGGGCCGTGCTCTTCCTTGCTCTCGCCGCCGCCGTGTTCGTGGGCGCCGTGTACCTCGTCTTCCGC
CCCCGCGCGCCCGCCTTTTCCGTCGCCTCCCTCTCCATCCGCGGCCTTGACGTGGTCGCCC---------CTTCGCTCTC
GCCGGAGCTCGAAGTCGCCCTGCGCGCGGACAACGGCGCGAACAGGAAGGTGGGCGTCGACTACCGCGGGGCCGGTGAGG
TGGCAGTCACTTACTCCGGTGCGCGCCTTGCGGCCGGCCAGTGGCCGGCGTTCCACCAGGCGCCGAGGAACGTGACGGTG
TTGTCCACGACGCTGAGGGGGAC---C------GGCGTGAGCTTCAGCGACGAGCAGAGGAAGCAGCTGGCCGCGGAGCA
GGCGGCGCGCGCGGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGAGGCTGCGGTTCGGGAAGGTGCTGCGGACGTGGA
CGGTGGACGTGAAGGCCACGTGCCAGGTGACGGTTGACAGGCTGGCCGGCGAGGCAGCGGCGGCCAACAGAGGATGCCGG
GTCAAGGTCAGGCCGTTCTTGTGGTGGTGGTG------------------------------------------------
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>chr5D_1128
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-------------------------------------------CGTACATCGTCCAGATTCCCAAGGACCAGGTCCTCCG
CGTGCCGCCCCCCGACCGGGCCAGCCGGTACAAGAGCCTCGCGGAGCGCCCGGTCCGGCGCCGCCGCCTGCGCCGCGCCT
TCTTTGGCACCTGCGGGGCCGTGCTCTTCCTTGCTCTCGCCGCCGCCGTGTTCGTGGGCACCGTGTACCTCGTCTTCCGC
CCCCGCGCGCCCGCCTTCTCCGTCGCCTCCCTCTCCATCCGCGGCCTCGACGTGGCCGCCCTGCCGCCCTCTTCGCTCTC
GCCGGAGCTCGACGTCGCCCTGCGCGCGGACAACGGCGCGAACAGGAAGGTGGGCGTTGACTACCGCGGCGCCGGTGAGG
TGGCAGTCTCCTACTCCGGTGCGCGCCTTGCGGCCGGTCAGTGGCCGGCGTTCCACCAGGCGCCGAGGAACGTGACGGTG
TTCTCCACGACGCTGAGGGGAAC---C------GGCGTGAGCTTCAGCGACGAGCAGAGGAAGCAGCTGGCCGCGGAGCA
GGCGGCGCGCGCGGTGCCGCTGACGGTGGAGGCGCGGGTGCCGGTGAGGCTGCGGTTCGGGAAGGTGCTGCGGACGTGGA
CGGTGGACGTGAAGGCGACGTGCCAGGTGACGGTTGACAAGCTGGCCGGCGAGGCAGCGGCGGCCAACAGAGGATGCCGG
GTCAAGGTCAGACCGTTCTTGTGGTGGTGGTG------------------------------------------------
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>chr5A_1187
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-------------------------------------CTCGCGGAGCGCCCGGTCCGGCGCCGCCGCCTGCGCCGCGCCT
GCTTTGGCGCCTGCGGGGCCGTGCTCTTCCTTGCCGTCGCCGCCGCCGTGTTCGTGGGCGCCGTGTACCTCGTCTTCCGC
CCCCGCGCGCCCGCCTTCTCCGTCGCCTCCCTCTCCATCCGCGGCCTCGACGTGGCCGCCCTGCCGCCCTCTTCGCTCTC
GCCGGAGCTCGACGTCGCCCTGCGCGCGGACAACGGCGCGAACAGGAAGGTGGGCGTCGACTACCGCGGCGCCGGCGAGG
TGGCGGTCTCCTACTCCGGTGCGCGCCTTGCGGCCGGCCAGTGGCCGGCGTTCCACCAGGCGCCGAGGAACGTGACGGTG
CTCTCCACGACGCTGAGGGGGAC---C------GGCGTGAGCTTCAGCGACGAGCAGAGGAAGCAGCTGGCCGCGGAGCA
GGCGGCGCGCGCGGTGCCGCTGACGGTGGAGGCGCGGGTGCCCGTGCGGCTGCGGTTCGGGAAGGTGCTGCGGACGTGGA
CGGTGGACGTGAAGGCGACGTGCCAGGTGACGGTTGACAGGCTGGCCGGCGAGGCAGCGGCGGCCAACAGAGGATGCCGG
GTCAAGGTCAGGCCGTTCTTGTGGTGGTGGTG------------------------------------------------
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>SNPs
----------S---------------------------------------------------------------------
----------S------------S-----------------------S--------------------------------
--S--------------------------------S-------------S----------------S-------------
----------S-----------------------------------------S----------S------SS--------
-----S--------S---S----------------S-----------------------SSSSSSSSSSSSSSSS-----
-S-------------S----------------------------------------------------------------
------------------------------S----------------------S------S-------------------
----------------------SS----------------S------------------S--------------------
----------------------------------------------------------------S------S--------
------------------S-------------------------------------------------------------
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---------------------------------------------------------------------S----------
----------S---------------------------------------SS--------------------SSSS-SSS
S--------S-------SSSSS----------------------------------SS----------------------
-------------S-SS---------------------------------------------------------------
--------S-SS-S----S-----S-SS---------S---------S--------------------------------
-------------------------S---------------S--------------------------------------
----------S--------------------------------S-----------S------------------------
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-------------------------------------------------S------------------------------
--------------------------------------------------------------------------S-----
--S-----------------------S-----------------------------------------------------
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----------S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2073
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-----------------------------------------------------AAACGAAATCAAACGGCGGG-------
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>reverse_3837
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----------------------------------------------------------------------------CCTG
ACAGGGTTGACCTCAC----------------------------------------------------------------
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