Multiple sequence alignment - TraesCS2A01G452700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G452700 chr2A 100.000 2712 0 0 1 2712 702191661 702188950 0.000000e+00 5009.0
1 TraesCS2A01G452700 chr2A 86.538 104 14 0 2608 2711 719302197 719302094 6.140000e-22 115.0
2 TraesCS2A01G452700 chr2A 85.455 110 16 0 2603 2712 735822825 735822934 6.140000e-22 115.0
3 TraesCS2A01G452700 chr2D 93.078 1098 37 14 572 1638 561932089 561931000 0.000000e+00 1570.0
4 TraesCS2A01G452700 chr2D 88.277 563 15 16 1905 2424 561930978 561930424 6.370000e-176 627.0
5 TraesCS2A01G452700 chr2D 86.397 272 14 9 17 286 561933263 561933013 2.660000e-70 276.0
6 TraesCS2A01G452700 chr2D 96.386 166 6 0 280 445 628554734 628554899 9.570000e-70 274.0
7 TraesCS2A01G452700 chr2D 95.808 167 7 0 279 445 18206971 18207137 1.240000e-68 270.0
8 TraesCS2A01G452700 chr2D 96.269 134 5 0 447 580 561933014 561932881 1.260000e-53 220.0
9 TraesCS2A01G452700 chr2D 85.849 106 15 0 2607 2712 590722045 590722150 2.210000e-21 113.0
10 TraesCS2A01G452700 chr2D 96.923 65 2 0 2439 2503 561930357 561930293 2.850000e-20 110.0
11 TraesCS2A01G452700 chr2D 84.615 78 9 3 1702 1778 354783757 354783682 1.040000e-09 75.0
12 TraesCS2A01G452700 chr2D 81.928 83 12 2 1695 1776 188886078 188886158 1.740000e-07 67.6
13 TraesCS2A01G452700 chr2B 90.217 1247 47 29 447 1629 671211382 671210147 0.000000e+00 1557.0
14 TraesCS2A01G452700 chr2B 83.784 666 34 16 1905 2500 671210129 671209468 5.070000e-157 564.0
15 TraesCS2A01G452700 chr2B 90.182 275 16 8 18 286 671211650 671211381 5.560000e-92 348.0
16 TraesCS2A01G452700 chr2B 91.667 84 5 1 18 101 671238596 671238515 6.140000e-22 115.0
17 TraesCS2A01G452700 chr2B 82.353 85 11 3 1693 1776 428384673 428384592 1.350000e-08 71.3
18 TraesCS2A01G452700 chr5D 97.576 165 4 0 281 445 447433600 447433764 1.590000e-72 283.0
19 TraesCS2A01G452700 chr5D 92.778 180 12 1 276 454 435791610 435791431 2.680000e-65 259.0
20 TraesCS2A01G452700 chr5D 89.109 101 11 0 2612 2712 92120564 92120464 2.830000e-25 126.0
21 TraesCS2A01G452700 chr3D 95.808 167 7 0 284 450 42739887 42740053 1.240000e-68 270.0
22 TraesCS2A01G452700 chr1A 96.341 164 6 0 281 444 499624070 499623907 1.240000e-68 270.0
23 TraesCS2A01G452700 chr4D 94.220 173 9 1 280 452 16666766 16666595 2.070000e-66 263.0
24 TraesCS2A01G452700 chr4D 85.849 106 15 0 2607 2712 504197120 504197225 2.210000e-21 113.0
25 TraesCS2A01G452700 chr3A 93.296 179 11 1 275 452 630797825 630797647 2.070000e-66 263.0
26 TraesCS2A01G452700 chr7A 95.679 162 7 0 284 445 521904385 521904224 7.450000e-66 261.0
27 TraesCS2A01G452700 chr7A 83.133 83 11 2 1695 1776 374987567 374987647 3.750000e-09 73.1
28 TraesCS2A01G452700 chr7B 88.119 101 12 0 2608 2708 670256982 670256882 1.320000e-23 121.0
29 TraesCS2A01G452700 chr7B 85.849 106 15 0 2607 2712 289873238 289873343 2.210000e-21 113.0
30 TraesCS2A01G452700 chr7B 81.928 83 11 3 1696 1776 743467975 743467895 1.740000e-07 67.6
31 TraesCS2A01G452700 chr5B 86.792 106 14 0 2607 2712 14700109 14700004 4.740000e-23 119.0
32 TraesCS2A01G452700 chr6B 84.906 106 16 0 2607 2712 707334507 707334612 1.030000e-19 108.0
33 TraesCS2A01G452700 chr6B 80.460 87 13 4 1693 1778 154545162 154545079 2.250000e-06 63.9
34 TraesCS2A01G452700 chr7D 84.211 76 9 2 1702 1776 297632578 297632651 1.350000e-08 71.3
35 TraesCS2A01G452700 chr3B 82.353 85 11 3 1693 1776 316163741 316163660 1.350000e-08 71.3
36 TraesCS2A01G452700 chr1B 81.928 83 12 3 1695 1776 555200243 555200163 1.740000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G452700 chr2A 702188950 702191661 2711 True 5009.0 5009 100.0000 1 2712 1 chr2A.!!$R1 2711
1 TraesCS2A01G452700 chr2D 561930293 561933263 2970 True 560.6 1570 92.1888 17 2503 5 chr2D.!!$R2 2486
2 TraesCS2A01G452700 chr2B 671209468 671211650 2182 True 823.0 1557 88.0610 18 2500 3 chr2B.!!$R3 2482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 461 0.036388 GAACGGAGGGAGCACATCAA 60.036 55.0 0.00 0.0 0.0 2.57 F
1214 2087 0.179032 TTCTTCAAGGCGTGCAAGGA 60.179 50.0 0.79 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 2543 0.102300 ACAACAAAGGAAAGTGCGGC 59.898 50.0 0.0 0.0 0.0 6.53 R
2641 3622 0.038526 AGCACGACGACTTTCCGATT 60.039 50.0 0.0 0.0 0.0 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.749609 GCAACGCGTAAGGATCGACC 61.750 60.000 14.46 0.00 39.35 4.79
70 71 2.952714 GGCAATGAGGCAAGTCAGT 58.047 52.632 0.00 0.00 43.51 3.41
200 205 6.589907 CAGAACACCAAGCCCATTTAATTTAC 59.410 38.462 0.00 0.00 0.00 2.01
210 215 7.564793 AGCCCATTTAATTTACTCCATTTTCC 58.435 34.615 0.00 0.00 0.00 3.13
211 216 7.402941 AGCCCATTTAATTTACTCCATTTTCCT 59.597 33.333 0.00 0.00 0.00 3.36
213 218 9.958180 CCCATTTAATTTACTCCATTTTCCTTT 57.042 29.630 0.00 0.00 0.00 3.11
219 224 8.411991 AATTTACTCCATTTTCCTTTAACGGA 57.588 30.769 0.00 0.00 0.00 4.69
220 225 8.589701 ATTTACTCCATTTTCCTTTAACGGAT 57.410 30.769 0.86 0.00 32.02 4.18
221 226 9.689501 ATTTACTCCATTTTCCTTTAACGGATA 57.310 29.630 0.86 0.00 32.02 2.59
222 227 6.997239 ACTCCATTTTCCTTTAACGGATAC 57.003 37.500 0.86 0.00 32.02 2.24
223 228 6.478129 ACTCCATTTTCCTTTAACGGATACA 58.522 36.000 0.86 0.00 32.02 2.29
224 229 7.116736 ACTCCATTTTCCTTTAACGGATACAT 58.883 34.615 0.86 0.00 32.02 2.29
225 230 8.269317 ACTCCATTTTCCTTTAACGGATACATA 58.731 33.333 0.86 0.00 32.02 2.29
226 231 8.441312 TCCATTTTCCTTTAACGGATACATAC 57.559 34.615 0.86 0.00 32.02 2.39
227 232 7.225145 TCCATTTTCCTTTAACGGATACATACG 59.775 37.037 0.86 0.00 40.74 3.06
228 233 5.971895 TTTCCTTTAACGGATACATACGC 57.028 39.130 0.86 0.00 37.74 4.42
229 234 4.652421 TCCTTTAACGGATACATACGCA 57.348 40.909 0.00 0.00 37.74 5.24
230 235 5.204409 TCCTTTAACGGATACATACGCAT 57.796 39.130 0.00 0.00 37.74 4.73
231 236 4.986034 TCCTTTAACGGATACATACGCATG 59.014 41.667 0.00 0.00 37.74 4.06
246 251 4.715520 ACGCATGTCGATGATTATGAAC 57.284 40.909 14.88 0.00 41.67 3.18
285 294 9.683069 ATTTTGTTCTTGTCATCTTTCATGTAC 57.317 29.630 0.00 0.00 0.00 2.90
286 295 8.450578 TTTGTTCTTGTCATCTTTCATGTACT 57.549 30.769 0.00 0.00 0.00 2.73
287 296 7.658179 TGTTCTTGTCATCTTTCATGTACTC 57.342 36.000 0.00 0.00 0.00 2.59
288 297 6.650807 TGTTCTTGTCATCTTTCATGTACTCC 59.349 38.462 0.00 0.00 0.00 3.85
289 298 5.734720 TCTTGTCATCTTTCATGTACTCCC 58.265 41.667 0.00 0.00 0.00 4.30
290 299 5.485353 TCTTGTCATCTTTCATGTACTCCCT 59.515 40.000 0.00 0.00 0.00 4.20
291 300 5.344743 TGTCATCTTTCATGTACTCCCTC 57.655 43.478 0.00 0.00 0.00 4.30
292 301 4.162320 TGTCATCTTTCATGTACTCCCTCC 59.838 45.833 0.00 0.00 0.00 4.30
293 302 3.384789 TCATCTTTCATGTACTCCCTCCG 59.615 47.826 0.00 0.00 0.00 4.63
294 303 2.816411 TCTTTCATGTACTCCCTCCGT 58.184 47.619 0.00 0.00 0.00 4.69
295 304 3.170717 TCTTTCATGTACTCCCTCCGTT 58.829 45.455 0.00 0.00 0.00 4.44
296 305 3.194968 TCTTTCATGTACTCCCTCCGTTC 59.805 47.826 0.00 0.00 0.00 3.95
297 306 1.481871 TCATGTACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
298 307 1.006758 TCATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
299 308 2.242965 TCATGTACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
300 309 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
301 310 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
302 311 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
303 312 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
304 313 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
305 314 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
306 315 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
307 316 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
308 317 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
309 318 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
310 319 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
311 320 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
312 321 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
313 322 8.741841 CCCTCCGTTCCTAAATATTTGTTTTTA 58.258 33.333 11.05 0.00 0.00 1.52
341 350 9.396022 AGAGGTTTTAAATGGTGACTACATATG 57.604 33.333 0.00 0.00 0.00 1.78
342 351 8.519799 AGGTTTTAAATGGTGACTACATATGG 57.480 34.615 7.80 0.00 0.00 2.74
343 352 8.333235 AGGTTTTAAATGGTGACTACATATGGA 58.667 33.333 7.80 0.00 0.00 3.41
344 353 8.621286 GGTTTTAAATGGTGACTACATATGGAG 58.379 37.037 13.77 13.77 0.00 3.86
345 354 9.174166 GTTTTAAATGGTGACTACATATGGAGT 57.826 33.333 20.96 20.96 0.00 3.85
350 359 9.920946 AAATGGTGACTACATATGGAGTAAAAT 57.079 29.630 20.86 8.14 0.00 1.82
351 360 8.908786 ATGGTGACTACATATGGAGTAAAATG 57.091 34.615 20.86 0.00 0.00 2.32
352 361 8.084985 TGGTGACTACATATGGAGTAAAATGA 57.915 34.615 20.86 0.65 0.00 2.57
353 362 8.204160 TGGTGACTACATATGGAGTAAAATGAG 58.796 37.037 20.86 0.00 0.00 2.90
354 363 8.204836 GGTGACTACATATGGAGTAAAATGAGT 58.795 37.037 20.86 0.00 0.00 3.41
355 364 9.035607 GTGACTACATATGGAGTAAAATGAGTG 57.964 37.037 20.86 0.00 0.00 3.51
356 365 8.977412 TGACTACATATGGAGTAAAATGAGTGA 58.023 33.333 20.86 0.00 0.00 3.41
357 366 9.817809 GACTACATATGGAGTAAAATGAGTGAA 57.182 33.333 20.86 0.00 0.00 3.18
364 373 8.723942 ATGGAGTAAAATGAGTGAATCTACAC 57.276 34.615 0.00 0.00 40.60 2.90
405 414 5.353394 ACATCCGTATGTAGTGACCATTT 57.647 39.130 0.00 0.00 44.66 2.32
406 415 5.116180 ACATCCGTATGTAGTGACCATTTG 58.884 41.667 0.00 0.00 44.66 2.32
407 416 5.105106 ACATCCGTATGTAGTGACCATTTGA 60.105 40.000 0.00 0.00 44.66 2.69
408 417 5.408880 TCCGTATGTAGTGACCATTTGAA 57.591 39.130 0.00 0.00 0.00 2.69
409 418 5.795972 TCCGTATGTAGTGACCATTTGAAA 58.204 37.500 0.00 0.00 0.00 2.69
410 419 6.411376 TCCGTATGTAGTGACCATTTGAAAT 58.589 36.000 0.00 0.00 0.00 2.17
411 420 6.537301 TCCGTATGTAGTGACCATTTGAAATC 59.463 38.462 0.00 0.00 0.00 2.17
412 421 6.538742 CCGTATGTAGTGACCATTTGAAATCT 59.461 38.462 0.00 0.00 0.00 2.40
413 422 7.254455 CCGTATGTAGTGACCATTTGAAATCTC 60.254 40.741 0.00 0.00 0.00 2.75
414 423 7.492669 CGTATGTAGTGACCATTTGAAATCTCT 59.507 37.037 0.00 0.00 0.00 3.10
415 424 9.817809 GTATGTAGTGACCATTTGAAATCTCTA 57.182 33.333 0.00 0.00 0.00 2.43
416 425 8.954950 ATGTAGTGACCATTTGAAATCTCTAG 57.045 34.615 0.00 0.00 0.00 2.43
417 426 8.134202 TGTAGTGACCATTTGAAATCTCTAGA 57.866 34.615 0.00 0.00 0.00 2.43
418 427 8.593679 TGTAGTGACCATTTGAAATCTCTAGAA 58.406 33.333 0.00 0.00 0.00 2.10
419 428 9.436957 GTAGTGACCATTTGAAATCTCTAGAAA 57.563 33.333 0.00 0.00 0.00 2.52
420 429 8.558973 AGTGACCATTTGAAATCTCTAGAAAG 57.441 34.615 0.00 0.00 0.00 2.62
421 430 8.378565 AGTGACCATTTGAAATCTCTAGAAAGA 58.621 33.333 0.00 0.00 0.00 2.52
422 431 8.447053 GTGACCATTTGAAATCTCTAGAAAGAC 58.553 37.037 0.00 0.00 0.00 3.01
423 432 8.156820 TGACCATTTGAAATCTCTAGAAAGACA 58.843 33.333 0.00 0.00 0.00 3.41
424 433 8.924511 ACCATTTGAAATCTCTAGAAAGACAA 57.075 30.769 0.00 0.00 0.00 3.18
425 434 9.354673 ACCATTTGAAATCTCTAGAAAGACAAA 57.645 29.630 0.00 4.41 0.00 2.83
438 447 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
439 448 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
440 449 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
441 450 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
442 451 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
443 452 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
444 453 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
445 454 4.353383 AATATTTAGGAACGGAGGGAGC 57.647 45.455 0.00 0.00 0.00 4.70
452 461 0.036388 GAACGGAGGGAGCACATCAA 60.036 55.000 0.00 0.00 0.00 2.57
456 465 1.869754 CGGAGGGAGCACATCAATACG 60.870 57.143 0.00 0.00 0.00 3.06
648 1465 5.863935 ACAACCGTAAGTTCCGTCTAATAAC 59.136 40.000 0.00 0.00 36.18 1.89
661 1478 5.118664 CCGTCTAATAACCAGATATTGCACG 59.881 44.000 0.00 0.00 34.60 5.34
727 1544 4.377021 TCAAGCAACAGGTACAGTACTTG 58.623 43.478 18.83 18.83 40.70 3.16
777 1595 9.084164 ACAGTTACATTGTTATTACTCTTAGCG 57.916 33.333 0.00 0.00 0.00 4.26
831 1660 3.138468 TCGTCCTCCTCCATCTAATCAGA 59.862 47.826 0.00 0.00 34.56 3.27
845 1674 6.862711 TCTAATCAGATACCTACACGACTG 57.137 41.667 0.00 0.00 0.00 3.51
935 1781 1.498865 CCCGAATTTCCCATCGAGCG 61.499 60.000 0.00 0.00 41.43 5.03
968 1819 3.760580 ATTTCCTAGCAGGATCTTCCG 57.239 47.619 5.83 0.00 45.34 4.30
970 1821 1.693627 TCCTAGCAGGATCTTCCGTC 58.306 55.000 1.25 0.00 40.06 4.79
972 1823 0.676736 CTAGCAGGATCTTCCGTCCC 59.323 60.000 0.00 0.00 42.75 4.46
984 1857 6.374894 GGATCTTCCGTCCCTATATATATCGG 59.625 46.154 11.67 11.67 38.16 4.18
1055 1928 0.393402 AGCGCAAAGATGATGAGGCA 60.393 50.000 11.47 0.00 0.00 4.75
1059 1932 2.287427 CGCAAAGATGATGAGGCATTCC 60.287 50.000 0.00 0.00 0.00 3.01
1110 1983 0.992695 TCCTCTTCCTCCTCGTCTCA 59.007 55.000 0.00 0.00 0.00 3.27
1201 2074 3.639538 GACTACTGCGTCAAGTTCTTCA 58.360 45.455 0.00 0.00 34.11 3.02
1214 2087 0.179032 TTCTTCAAGGCGTGCAAGGA 60.179 50.000 0.79 0.00 0.00 3.36
1275 2148 1.068083 GAAGATCATCCGAGCGGCA 59.932 57.895 1.45 0.00 30.99 5.69
1320 2193 2.045926 ACCATCAAGGCCTCGCAC 60.046 61.111 5.23 0.00 43.14 5.34
1647 2520 8.525290 AATCCTGGAATACAATTTTAGACCAG 57.475 34.615 0.00 14.66 41.95 4.00
1648 2521 7.265599 TCCTGGAATACAATTTTAGACCAGA 57.734 36.000 19.57 9.53 44.08 3.86
1649 2522 7.872138 TCCTGGAATACAATTTTAGACCAGAT 58.128 34.615 19.57 0.00 44.08 2.90
1650 2523 8.998814 TCCTGGAATACAATTTTAGACCAGATA 58.001 33.333 19.57 10.39 44.08 1.98
1651 2524 9.627123 CCTGGAATACAATTTTAGACCAGATAA 57.373 33.333 19.57 0.00 44.08 1.75
1657 2530 7.611213 ACAATTTTAGACCAGATAAACTCCG 57.389 36.000 0.00 0.00 0.00 4.63
1659 2532 4.811969 TTTAGACCAGATAAACTCCGCA 57.188 40.909 0.00 0.00 0.00 5.69
1660 2533 4.811969 TTAGACCAGATAAACTCCGCAA 57.188 40.909 0.00 0.00 0.00 4.85
1661 2534 3.914426 AGACCAGATAAACTCCGCAAT 57.086 42.857 0.00 0.00 0.00 3.56
1662 2535 3.798202 AGACCAGATAAACTCCGCAATC 58.202 45.455 0.00 0.00 0.00 2.67
1663 2536 3.197766 AGACCAGATAAACTCCGCAATCA 59.802 43.478 0.00 0.00 0.00 2.57
1664 2537 3.270877 ACCAGATAAACTCCGCAATCAC 58.729 45.455 0.00 0.00 0.00 3.06
1665 2538 2.285220 CCAGATAAACTCCGCAATCACG 59.715 50.000 0.00 0.00 0.00 4.35
1666 2539 2.930040 CAGATAAACTCCGCAATCACGT 59.070 45.455 0.00 0.00 0.00 4.49
1667 2540 3.370978 CAGATAAACTCCGCAATCACGTT 59.629 43.478 0.00 0.00 0.00 3.99
1668 2541 4.000988 AGATAAACTCCGCAATCACGTTT 58.999 39.130 0.00 0.00 0.00 3.60
1669 2542 2.399396 AAACTCCGCAATCACGTTTG 57.601 45.000 0.00 0.00 0.00 2.93
1670 2543 0.591170 AACTCCGCAATCACGTTTGG 59.409 50.000 2.38 0.00 0.00 3.28
1671 2544 1.154225 CTCCGCAATCACGTTTGGC 60.154 57.895 2.38 0.00 0.00 4.52
1672 2545 2.126502 CCGCAATCACGTTTGGCC 60.127 61.111 0.00 0.00 0.00 5.36
1673 2546 2.501650 CGCAATCACGTTTGGCCG 60.502 61.111 0.00 0.00 0.00 6.13
1674 2547 2.804931 GCAATCACGTTTGGCCGC 60.805 61.111 0.00 0.00 0.00 6.53
1675 2548 2.642129 CAATCACGTTTGGCCGCA 59.358 55.556 0.00 0.00 0.00 5.69
1676 2549 1.729131 CAATCACGTTTGGCCGCAC 60.729 57.895 0.00 0.00 0.00 5.34
1677 2550 1.896660 AATCACGTTTGGCCGCACT 60.897 52.632 0.00 0.00 0.00 4.40
1678 2551 1.452145 AATCACGTTTGGCCGCACTT 61.452 50.000 0.00 0.00 0.00 3.16
1679 2552 1.452145 ATCACGTTTGGCCGCACTTT 61.452 50.000 0.00 0.00 0.00 2.66
1680 2553 1.657181 CACGTTTGGCCGCACTTTC 60.657 57.895 0.00 0.00 0.00 2.62
1681 2554 2.050442 CGTTTGGCCGCACTTTCC 60.050 61.111 0.00 0.00 0.00 3.13
1682 2555 2.551912 CGTTTGGCCGCACTTTCCT 61.552 57.895 0.00 0.00 0.00 3.36
1683 2556 1.739667 GTTTGGCCGCACTTTCCTT 59.260 52.632 0.00 0.00 0.00 3.36
1684 2557 0.104120 GTTTGGCCGCACTTTCCTTT 59.896 50.000 0.00 0.00 0.00 3.11
1685 2558 0.103937 TTTGGCCGCACTTTCCTTTG 59.896 50.000 0.00 0.00 0.00 2.77
1686 2559 1.040339 TTGGCCGCACTTTCCTTTGT 61.040 50.000 0.00 0.00 0.00 2.83
1687 2560 1.040339 TGGCCGCACTTTCCTTTGTT 61.040 50.000 0.00 0.00 0.00 2.83
1688 2561 0.597377 GGCCGCACTTTCCTTTGTTG 60.597 55.000 0.00 0.00 0.00 3.33
1689 2562 0.102300 GCCGCACTTTCCTTTGTTGT 59.898 50.000 0.00 0.00 0.00 3.32
1690 2563 1.470805 GCCGCACTTTCCTTTGTTGTT 60.471 47.619 0.00 0.00 0.00 2.83
1691 2564 2.459934 CCGCACTTTCCTTTGTTGTTC 58.540 47.619 0.00 0.00 0.00 3.18
1692 2565 2.099098 CCGCACTTTCCTTTGTTGTTCT 59.901 45.455 0.00 0.00 0.00 3.01
1693 2566 3.314080 CCGCACTTTCCTTTGTTGTTCTA 59.686 43.478 0.00 0.00 0.00 2.10
1694 2567 4.023193 CCGCACTTTCCTTTGTTGTTCTAT 60.023 41.667 0.00 0.00 0.00 1.98
1695 2568 5.180492 CCGCACTTTCCTTTGTTGTTCTATA 59.820 40.000 0.00 0.00 0.00 1.31
1696 2569 6.293735 CCGCACTTTCCTTTGTTGTTCTATAA 60.294 38.462 0.00 0.00 0.00 0.98
1697 2570 7.136119 CGCACTTTCCTTTGTTGTTCTATAAA 58.864 34.615 0.00 0.00 0.00 1.40
1698 2571 7.807907 CGCACTTTCCTTTGTTGTTCTATAAAT 59.192 33.333 0.00 0.00 0.00 1.40
1699 2572 9.476202 GCACTTTCCTTTGTTGTTCTATAAATT 57.524 29.630 0.00 0.00 0.00 1.82
1722 2595 9.668497 AATTATACTCCCTCTGTAAACAACTTC 57.332 33.333 0.00 0.00 0.00 3.01
1723 2596 6.681729 ATACTCCCTCTGTAAACAACTTCA 57.318 37.500 0.00 0.00 0.00 3.02
1724 2597 4.962155 ACTCCCTCTGTAAACAACTTCAG 58.038 43.478 0.00 0.00 0.00 3.02
1725 2598 4.409247 ACTCCCTCTGTAAACAACTTCAGT 59.591 41.667 0.00 0.00 0.00 3.41
1726 2599 4.703897 TCCCTCTGTAAACAACTTCAGTG 58.296 43.478 0.00 0.00 0.00 3.66
1727 2600 3.815401 CCCTCTGTAAACAACTTCAGTGG 59.185 47.826 0.00 0.00 39.65 4.00
1728 2601 4.444306 CCCTCTGTAAACAACTTCAGTGGA 60.444 45.833 11.87 0.00 41.28 4.02
1729 2602 5.308825 CCTCTGTAAACAACTTCAGTGGAT 58.691 41.667 0.00 0.00 41.28 3.41
1730 2603 5.765182 CCTCTGTAAACAACTTCAGTGGATT 59.235 40.000 0.00 0.00 41.28 3.01
1731 2604 6.263168 CCTCTGTAAACAACTTCAGTGGATTT 59.737 38.462 0.00 0.00 41.28 2.17
1732 2605 7.201821 CCTCTGTAAACAACTTCAGTGGATTTT 60.202 37.037 0.00 0.00 41.28 1.82
1733 2606 8.062065 TCTGTAAACAACTTCAGTGGATTTTT 57.938 30.769 0.00 0.00 0.00 1.94
1734 2607 9.179909 TCTGTAAACAACTTCAGTGGATTTTTA 57.820 29.630 0.00 0.00 0.00 1.52
1735 2608 9.965824 CTGTAAACAACTTCAGTGGATTTTTAT 57.034 29.630 0.00 0.00 0.00 1.40
1739 2612 9.665719 AAACAACTTCAGTGGATTTTTATTGTT 57.334 25.926 0.00 0.00 37.97 2.83
1740 2613 8.871686 ACAACTTCAGTGGATTTTTATTGTTC 57.128 30.769 0.00 0.00 0.00 3.18
1741 2614 8.695456 ACAACTTCAGTGGATTTTTATTGTTCT 58.305 29.630 0.00 0.00 0.00 3.01
1742 2615 9.533253 CAACTTCAGTGGATTTTTATTGTTCTT 57.467 29.630 0.00 0.00 0.00 2.52
1760 2633 7.807687 TGTTCTTAAGTAGTGATCTAAACGC 57.192 36.000 1.63 0.00 0.00 4.84
1761 2634 7.600065 TGTTCTTAAGTAGTGATCTAAACGCT 58.400 34.615 1.63 0.00 0.00 5.07
1762 2635 7.754027 TGTTCTTAAGTAGTGATCTAAACGCTC 59.246 37.037 1.63 0.00 0.00 5.03
1763 2636 7.627298 TCTTAAGTAGTGATCTAAACGCTCT 57.373 36.000 1.63 0.00 0.00 4.09
1764 2637 8.053026 TCTTAAGTAGTGATCTAAACGCTCTT 57.947 34.615 1.63 0.00 0.00 2.85
1765 2638 9.170734 TCTTAAGTAGTGATCTAAACGCTCTTA 57.829 33.333 1.63 0.00 0.00 2.10
1766 2639 9.953697 CTTAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
1802 2675 8.455682 TGAAAAGTGTGAAAGTAAGTAACAAGG 58.544 33.333 0.00 0.00 0.00 3.61
1803 2676 7.933215 AAAGTGTGAAAGTAAGTAACAAGGT 57.067 32.000 0.00 0.00 0.00 3.50
1804 2677 7.549615 AAGTGTGAAAGTAAGTAACAAGGTC 57.450 36.000 0.00 0.00 0.00 3.85
1805 2678 6.646267 AGTGTGAAAGTAAGTAACAAGGTCA 58.354 36.000 0.00 0.00 0.00 4.02
1806 2679 6.761714 AGTGTGAAAGTAAGTAACAAGGTCAG 59.238 38.462 0.00 0.00 0.00 3.51
1807 2680 6.537660 GTGTGAAAGTAAGTAACAAGGTCAGT 59.462 38.462 0.00 0.00 0.00 3.41
1808 2681 6.537301 TGTGAAAGTAAGTAACAAGGTCAGTG 59.463 38.462 0.00 0.00 0.00 3.66
1809 2682 6.018180 GTGAAAGTAAGTAACAAGGTCAGTGG 60.018 42.308 0.00 0.00 0.00 4.00
1810 2683 5.881923 AAGTAAGTAACAAGGTCAGTGGA 57.118 39.130 0.00 0.00 0.00 4.02
1811 2684 6.435292 AAGTAAGTAACAAGGTCAGTGGAT 57.565 37.500 0.00 0.00 0.00 3.41
1812 2685 6.435292 AGTAAGTAACAAGGTCAGTGGATT 57.565 37.500 0.00 0.00 0.00 3.01
1813 2686 6.838382 AGTAAGTAACAAGGTCAGTGGATTT 58.162 36.000 0.00 0.00 0.00 2.17
1814 2687 7.287810 AGTAAGTAACAAGGTCAGTGGATTTT 58.712 34.615 0.00 0.00 0.00 1.82
1815 2688 7.778382 AGTAAGTAACAAGGTCAGTGGATTTTT 59.222 33.333 0.00 0.00 0.00 1.94
1816 2689 6.391227 AGTAACAAGGTCAGTGGATTTTTG 57.609 37.500 0.00 0.00 0.00 2.44
1817 2690 4.670896 AACAAGGTCAGTGGATTTTTGG 57.329 40.909 0.00 0.00 0.00 3.28
1818 2691 2.365293 ACAAGGTCAGTGGATTTTTGGC 59.635 45.455 0.00 0.00 0.00 4.52
1819 2692 1.632589 AGGTCAGTGGATTTTTGGCC 58.367 50.000 0.00 0.00 36.85 5.36
1820 2693 1.147817 AGGTCAGTGGATTTTTGGCCT 59.852 47.619 3.32 0.00 41.90 5.19
1821 2694 1.546029 GGTCAGTGGATTTTTGGCCTC 59.454 52.381 3.32 0.00 33.83 4.70
1822 2695 2.238521 GTCAGTGGATTTTTGGCCTCA 58.761 47.619 3.32 0.00 0.00 3.86
1823 2696 2.827921 GTCAGTGGATTTTTGGCCTCAT 59.172 45.455 3.32 0.00 0.00 2.90
1824 2697 2.827322 TCAGTGGATTTTTGGCCTCATG 59.173 45.455 3.32 0.00 0.00 3.07
1825 2698 2.093869 CAGTGGATTTTTGGCCTCATGG 60.094 50.000 3.32 0.00 0.00 3.66
1835 2708 2.664185 CCTCATGGCTCGCGGATG 60.664 66.667 6.13 4.12 0.00 3.51
1836 2709 3.344215 CTCATGGCTCGCGGATGC 61.344 66.667 6.13 8.77 37.91 3.91
1837 2710 3.804153 CTCATGGCTCGCGGATGCT 62.804 63.158 6.13 0.00 39.65 3.79
1838 2711 3.646976 CATGGCTCGCGGATGCTG 61.647 66.667 6.13 0.58 39.65 4.41
1839 2712 4.166888 ATGGCTCGCGGATGCTGT 62.167 61.111 6.13 0.00 39.65 4.40
1840 2713 4.819761 TGGCTCGCGGATGCTGTC 62.820 66.667 6.13 0.00 39.65 3.51
1848 2721 2.507944 GGATGCTGTCCGATGCCT 59.492 61.111 0.00 0.00 37.23 4.75
1849 2722 1.748403 GGATGCTGTCCGATGCCTA 59.252 57.895 0.00 0.00 37.23 3.93
1850 2723 0.320247 GGATGCTGTCCGATGCCTAG 60.320 60.000 0.00 0.00 37.23 3.02
1851 2724 0.676184 GATGCTGTCCGATGCCTAGA 59.324 55.000 0.00 0.00 0.00 2.43
1852 2725 1.274728 GATGCTGTCCGATGCCTAGAT 59.725 52.381 0.00 0.00 0.00 1.98
1853 2726 0.676184 TGCTGTCCGATGCCTAGATC 59.324 55.000 0.00 0.00 0.00 2.75
1854 2727 0.965439 GCTGTCCGATGCCTAGATCT 59.035 55.000 0.00 0.00 0.00 2.75
1855 2728 1.067915 GCTGTCCGATGCCTAGATCTC 60.068 57.143 0.00 0.00 0.00 2.75
1856 2729 1.543802 CTGTCCGATGCCTAGATCTCC 59.456 57.143 0.00 0.00 0.00 3.71
1857 2730 0.523966 GTCCGATGCCTAGATCTCCG 59.476 60.000 0.00 0.00 0.00 4.63
1858 2731 1.214062 CCGATGCCTAGATCTCCGC 59.786 63.158 0.00 2.33 0.00 5.54
1859 2732 1.527433 CCGATGCCTAGATCTCCGCA 61.527 60.000 16.52 16.52 35.35 5.69
1860 2733 0.529833 CGATGCCTAGATCTCCGCAT 59.470 55.000 22.84 22.84 44.36 4.73
1861 2734 1.745653 CGATGCCTAGATCTCCGCATA 59.254 52.381 22.73 3.67 41.85 3.14
1862 2735 2.360483 CGATGCCTAGATCTCCGCATAT 59.640 50.000 22.73 8.91 41.85 1.78
1863 2736 3.715495 GATGCCTAGATCTCCGCATATG 58.285 50.000 22.73 0.00 41.85 1.78
1864 2737 2.529632 TGCCTAGATCTCCGCATATGT 58.470 47.619 11.57 0.00 0.00 2.29
1865 2738 2.232208 TGCCTAGATCTCCGCATATGTG 59.768 50.000 9.39 9.39 0.00 3.21
1866 2739 2.493675 GCCTAGATCTCCGCATATGTGA 59.506 50.000 17.89 7.31 0.00 3.58
1867 2740 3.131933 GCCTAGATCTCCGCATATGTGAT 59.868 47.826 17.89 9.53 0.00 3.06
1868 2741 4.680702 CCTAGATCTCCGCATATGTGATG 58.319 47.826 17.89 9.54 0.00 3.07
1869 2742 4.400567 CCTAGATCTCCGCATATGTGATGA 59.599 45.833 17.89 14.16 0.00 2.92
1870 2743 5.068855 CCTAGATCTCCGCATATGTGATGAT 59.931 44.000 17.89 17.73 0.00 2.45
1871 2744 4.756502 AGATCTCCGCATATGTGATGATG 58.243 43.478 17.89 0.60 0.00 3.07
1872 2745 3.323751 TCTCCGCATATGTGATGATGG 57.676 47.619 17.89 0.00 0.00 3.51
1873 2746 2.634453 TCTCCGCATATGTGATGATGGT 59.366 45.455 17.89 0.00 0.00 3.55
1874 2747 2.740447 CTCCGCATATGTGATGATGGTG 59.260 50.000 17.89 0.00 0.00 4.17
1875 2748 2.368221 TCCGCATATGTGATGATGGTGA 59.632 45.455 17.89 0.95 0.00 4.02
1876 2749 3.140623 CCGCATATGTGATGATGGTGAA 58.859 45.455 17.89 0.00 0.00 3.18
1877 2750 3.187842 CCGCATATGTGATGATGGTGAAG 59.812 47.826 17.89 0.00 0.00 3.02
1878 2751 3.811497 CGCATATGTGATGATGGTGAAGT 59.189 43.478 10.90 0.00 0.00 3.01
1879 2752 4.274214 CGCATATGTGATGATGGTGAAGTT 59.726 41.667 10.90 0.00 0.00 2.66
1880 2753 5.220912 CGCATATGTGATGATGGTGAAGTTT 60.221 40.000 10.90 0.00 0.00 2.66
1881 2754 6.204359 GCATATGTGATGATGGTGAAGTTTC 58.796 40.000 4.29 0.00 0.00 2.78
1882 2755 6.039047 GCATATGTGATGATGGTGAAGTTTCT 59.961 38.462 4.29 0.00 0.00 2.52
1883 2756 7.637229 CATATGTGATGATGGTGAAGTTTCTC 58.363 38.462 0.00 0.00 0.00 2.87
1884 2757 4.971939 TGTGATGATGGTGAAGTTTCTCA 58.028 39.130 0.00 0.00 0.00 3.27
1885 2758 5.375773 TGTGATGATGGTGAAGTTTCTCAA 58.624 37.500 0.00 0.00 0.00 3.02
1886 2759 5.827267 TGTGATGATGGTGAAGTTTCTCAAA 59.173 36.000 0.00 0.00 0.00 2.69
1887 2760 6.320926 TGTGATGATGGTGAAGTTTCTCAAAA 59.679 34.615 0.00 0.00 0.00 2.44
1888 2761 7.147932 TGTGATGATGGTGAAGTTTCTCAAAAA 60.148 33.333 0.00 0.00 0.00 1.94
1918 2791 4.877823 TGATCATGGTGAAATAGCAGTCAC 59.122 41.667 0.00 0.00 42.83 3.67
1984 2863 2.545106 CGAATGCATGAACATCCATCGA 59.455 45.455 0.00 0.00 32.26 3.59
2017 2896 4.212143 TGTCAATGTTCAGGAGATCTGG 57.788 45.455 0.00 0.00 43.53 3.86
2113 2992 8.694540 AGTGCAAGATTATATTATTGTTGGCAA 58.305 29.630 0.00 0.00 39.16 4.52
2115 2994 9.695526 TGCAAGATTATATTATTGTTGGCAATC 57.304 29.630 1.92 0.00 43.61 2.67
2467 3448 4.730966 TCCTAAATTTTACTGTGTGGGCA 58.269 39.130 0.00 0.00 0.00 5.36
2496 3477 3.951775 TCCAACCAAATGTTACCATGC 57.048 42.857 0.00 0.00 34.69 4.06
2503 3484 3.257873 CCAAATGTTACCATGCACTTCCA 59.742 43.478 0.00 0.00 0.00 3.53
2504 3485 4.236935 CAAATGTTACCATGCACTTCCAC 58.763 43.478 0.00 0.00 0.00 4.02
2505 3486 2.949177 TGTTACCATGCACTTCCACT 57.051 45.000 0.00 0.00 0.00 4.00
2506 3487 3.222173 TGTTACCATGCACTTCCACTT 57.778 42.857 0.00 0.00 0.00 3.16
2507 3488 3.146066 TGTTACCATGCACTTCCACTTC 58.854 45.455 0.00 0.00 0.00 3.01
2508 3489 3.181445 TGTTACCATGCACTTCCACTTCT 60.181 43.478 0.00 0.00 0.00 2.85
2509 3490 2.664402 ACCATGCACTTCCACTTCTT 57.336 45.000 0.00 0.00 0.00 2.52
2510 3491 2.949447 ACCATGCACTTCCACTTCTTT 58.051 42.857 0.00 0.00 0.00 2.52
2511 3492 3.299503 ACCATGCACTTCCACTTCTTTT 58.700 40.909 0.00 0.00 0.00 2.27
2512 3493 3.319122 ACCATGCACTTCCACTTCTTTTC 59.681 43.478 0.00 0.00 0.00 2.29
2513 3494 3.571401 CCATGCACTTCCACTTCTTTTCT 59.429 43.478 0.00 0.00 0.00 2.52
2514 3495 4.038402 CCATGCACTTCCACTTCTTTTCTT 59.962 41.667 0.00 0.00 0.00 2.52
2515 3496 5.452356 CCATGCACTTCCACTTCTTTTCTTT 60.452 40.000 0.00 0.00 0.00 2.52
2516 3497 5.659440 TGCACTTCCACTTCTTTTCTTTT 57.341 34.783 0.00 0.00 0.00 2.27
2517 3498 5.650543 TGCACTTCCACTTCTTTTCTTTTC 58.349 37.500 0.00 0.00 0.00 2.29
2518 3499 5.418840 TGCACTTCCACTTCTTTTCTTTTCT 59.581 36.000 0.00 0.00 0.00 2.52
2519 3500 6.071391 TGCACTTCCACTTCTTTTCTTTTCTT 60.071 34.615 0.00 0.00 0.00 2.52
2520 3501 6.813649 GCACTTCCACTTCTTTTCTTTTCTTT 59.186 34.615 0.00 0.00 0.00 2.52
2521 3502 7.331934 GCACTTCCACTTCTTTTCTTTTCTTTT 59.668 33.333 0.00 0.00 0.00 2.27
2522 3503 9.208022 CACTTCCACTTCTTTTCTTTTCTTTTT 57.792 29.630 0.00 0.00 0.00 1.94
2583 3564 7.814264 AAGATGTTTTAGATCCCTAGCAATG 57.186 36.000 0.00 0.00 0.00 2.82
2584 3565 7.141758 AGATGTTTTAGATCCCTAGCAATGA 57.858 36.000 0.00 0.00 0.00 2.57
2585 3566 7.753630 AGATGTTTTAGATCCCTAGCAATGAT 58.246 34.615 0.00 0.00 0.00 2.45
2586 3567 8.223330 AGATGTTTTAGATCCCTAGCAATGATT 58.777 33.333 0.00 0.00 0.00 2.57
2587 3568 8.773033 ATGTTTTAGATCCCTAGCAATGATTT 57.227 30.769 0.00 0.00 0.00 2.17
2588 3569 7.999679 TGTTTTAGATCCCTAGCAATGATTTG 58.000 34.615 0.00 0.00 35.85 2.32
2589 3570 7.833682 TGTTTTAGATCCCTAGCAATGATTTGA 59.166 33.333 0.00 0.00 34.60 2.69
2590 3571 8.686334 GTTTTAGATCCCTAGCAATGATTTGAA 58.314 33.333 0.00 0.00 34.60 2.69
2591 3572 8.821686 TTTAGATCCCTAGCAATGATTTGAAA 57.178 30.769 0.00 0.00 34.60 2.69
2592 3573 6.705863 AGATCCCTAGCAATGATTTGAAAC 57.294 37.500 0.00 0.00 34.60 2.78
2593 3574 6.189859 AGATCCCTAGCAATGATTTGAAACA 58.810 36.000 0.00 0.00 34.60 2.83
2594 3575 6.837568 AGATCCCTAGCAATGATTTGAAACAT 59.162 34.615 0.00 0.00 34.60 2.71
2595 3576 6.855763 TCCCTAGCAATGATTTGAAACATT 57.144 33.333 0.00 0.00 37.22 2.71
2596 3577 7.953005 TCCCTAGCAATGATTTGAAACATTA 57.047 32.000 0.00 0.00 35.39 1.90
2597 3578 8.537728 TCCCTAGCAATGATTTGAAACATTAT 57.462 30.769 0.00 0.00 35.39 1.28
2598 3579 9.639563 TCCCTAGCAATGATTTGAAACATTATA 57.360 29.630 0.00 0.00 35.39 0.98
2611 3592 9.567848 TTTGAAACATTATATTTCTTTCTCGCC 57.432 29.630 0.00 0.00 37.05 5.54
2612 3593 7.406553 TGAAACATTATATTTCTTTCTCGCCG 58.593 34.615 0.00 0.00 37.05 6.46
2613 3594 5.924475 ACATTATATTTCTTTCTCGCCGG 57.076 39.130 0.00 0.00 0.00 6.13
2614 3595 5.607477 ACATTATATTTCTTTCTCGCCGGA 58.393 37.500 5.05 0.00 0.00 5.14
2615 3596 5.696724 ACATTATATTTCTTTCTCGCCGGAG 59.303 40.000 5.05 0.00 41.89 4.63
2616 3597 3.821421 ATATTTCTTTCTCGCCGGAGT 57.179 42.857 5.05 0.00 41.26 3.85
2617 3598 2.011540 ATTTCTTTCTCGCCGGAGTC 57.988 50.000 5.05 0.00 41.26 3.36
2618 3599 0.388134 TTTCTTTCTCGCCGGAGTCG 60.388 55.000 5.05 0.00 41.26 4.18
2629 3610 2.528797 CGGAGTCGGACAAACCTTG 58.471 57.895 11.27 0.00 36.31 3.61
2631 3612 1.808891 CGGAGTCGGACAAACCTTGTT 60.809 52.381 11.27 0.00 45.52 2.83
2632 3613 1.602377 GGAGTCGGACAAACCTTGTTG 59.398 52.381 11.27 0.00 45.52 3.33
2633 3614 2.285977 GAGTCGGACAAACCTTGTTGT 58.714 47.619 11.27 0.00 45.52 3.32
2634 3615 3.460103 GAGTCGGACAAACCTTGTTGTA 58.540 45.455 11.27 0.00 45.52 2.41
2635 3616 3.463944 AGTCGGACAAACCTTGTTGTAG 58.536 45.455 11.27 0.00 45.52 2.74
2636 3617 3.118519 AGTCGGACAAACCTTGTTGTAGT 60.119 43.478 11.27 0.00 45.52 2.73
2637 3618 4.099881 AGTCGGACAAACCTTGTTGTAGTA 59.900 41.667 11.27 0.00 45.52 1.82
2638 3619 4.446719 GTCGGACAAACCTTGTTGTAGTAG 59.553 45.833 2.62 0.00 45.52 2.57
2639 3620 4.341806 TCGGACAAACCTTGTTGTAGTAGA 59.658 41.667 0.00 0.00 45.52 2.59
2640 3621 4.446719 CGGACAAACCTTGTTGTAGTAGAC 59.553 45.833 0.00 0.00 45.52 2.59
2641 3622 5.362263 GGACAAACCTTGTTGTAGTAGACA 58.638 41.667 0.00 0.00 45.52 3.41
2642 3623 5.818857 GGACAAACCTTGTTGTAGTAGACAA 59.181 40.000 0.00 0.00 45.52 3.18
2643 3624 6.485648 GGACAAACCTTGTTGTAGTAGACAAT 59.514 38.462 0.00 0.00 45.52 2.71
2644 3625 7.307811 GGACAAACCTTGTTGTAGTAGACAATC 60.308 40.741 0.00 0.00 45.52 2.67
2653 3634 4.978186 TGTAGTAGACAATCGGAAAGTCG 58.022 43.478 7.31 0.00 37.36 4.18
2654 3635 4.456911 TGTAGTAGACAATCGGAAAGTCGT 59.543 41.667 7.31 1.47 37.36 4.34
2655 3636 4.094090 AGTAGACAATCGGAAAGTCGTC 57.906 45.455 7.31 0.00 37.36 4.20
2656 3637 1.978542 AGACAATCGGAAAGTCGTCG 58.021 50.000 7.31 0.00 37.36 5.12
2657 3638 1.268899 AGACAATCGGAAAGTCGTCGT 59.731 47.619 7.31 0.00 37.36 4.34
2658 3639 1.385743 GACAATCGGAAAGTCGTCGTG 59.614 52.381 0.00 0.00 0.00 4.35
2659 3640 0.093026 CAATCGGAAAGTCGTCGTGC 59.907 55.000 0.00 0.00 0.00 5.34
2660 3641 0.038526 AATCGGAAAGTCGTCGTGCT 60.039 50.000 0.00 0.00 0.00 4.40
2661 3642 0.806868 ATCGGAAAGTCGTCGTGCTA 59.193 50.000 0.00 0.00 0.00 3.49
2662 3643 0.592637 TCGGAAAGTCGTCGTGCTAA 59.407 50.000 0.00 0.00 0.00 3.09
2663 3644 1.200716 TCGGAAAGTCGTCGTGCTAAT 59.799 47.619 0.00 0.00 0.00 1.73
2664 3645 1.320555 CGGAAAGTCGTCGTGCTAATG 59.679 52.381 0.00 0.00 0.00 1.90
2665 3646 1.060698 GGAAAGTCGTCGTGCTAATGC 59.939 52.381 0.00 0.00 40.20 3.56
2666 3647 1.993370 GAAAGTCGTCGTGCTAATGCT 59.007 47.619 0.00 0.00 40.48 3.79
2667 3648 1.630148 AAGTCGTCGTGCTAATGCTC 58.370 50.000 0.00 0.00 40.48 4.26
2668 3649 0.179134 AGTCGTCGTGCTAATGCTCC 60.179 55.000 0.00 0.00 40.48 4.70
2669 3650 0.457853 GTCGTCGTGCTAATGCTCCA 60.458 55.000 0.00 0.00 40.48 3.86
2670 3651 0.457853 TCGTCGTGCTAATGCTCCAC 60.458 55.000 0.00 0.00 40.48 4.02
2671 3652 0.735978 CGTCGTGCTAATGCTCCACA 60.736 55.000 0.00 0.00 40.48 4.17
2672 3653 1.656652 GTCGTGCTAATGCTCCACAT 58.343 50.000 0.00 0.00 42.30 3.21
2673 3654 1.328680 GTCGTGCTAATGCTCCACATG 59.671 52.381 0.00 0.00 39.60 3.21
2674 3655 1.206849 TCGTGCTAATGCTCCACATGA 59.793 47.619 0.00 0.00 39.60 3.07
2675 3656 1.328680 CGTGCTAATGCTCCACATGAC 59.671 52.381 0.00 0.00 39.60 3.06
2676 3657 1.672881 GTGCTAATGCTCCACATGACC 59.327 52.381 0.00 0.00 39.60 4.02
2677 3658 0.940126 GCTAATGCTCCACATGACCG 59.060 55.000 0.00 0.00 39.60 4.79
2678 3659 1.586422 CTAATGCTCCACATGACCGG 58.414 55.000 0.00 0.00 39.60 5.28
2679 3660 0.463654 TAATGCTCCACATGACCGGC 60.464 55.000 0.00 0.00 39.60 6.13
2680 3661 2.482796 AATGCTCCACATGACCGGCA 62.483 55.000 0.00 0.00 39.60 5.69
2681 3662 3.127533 GCTCCACATGACCGGCAC 61.128 66.667 0.00 0.00 0.00 5.01
2682 3663 2.347114 CTCCACATGACCGGCACA 59.653 61.111 0.00 2.06 0.00 4.57
2683 3664 2.031919 TCCACATGACCGGCACAC 59.968 61.111 0.00 0.00 0.00 3.82
2684 3665 3.055719 CCACATGACCGGCACACC 61.056 66.667 0.00 0.00 0.00 4.16
2685 3666 2.281414 CACATGACCGGCACACCA 60.281 61.111 0.00 0.00 34.57 4.17
2686 3667 2.032528 ACATGACCGGCACACCAG 59.967 61.111 0.00 0.00 34.57 4.00
2687 3668 2.347114 CATGACCGGCACACCAGA 59.653 61.111 0.00 0.00 34.57 3.86
2688 3669 1.302431 CATGACCGGCACACCAGAA 60.302 57.895 0.00 0.00 34.57 3.02
2689 3670 1.302511 ATGACCGGCACACCAGAAC 60.303 57.895 0.00 0.00 34.57 3.01
2690 3671 2.050836 ATGACCGGCACACCAGAACA 62.051 55.000 0.00 0.00 34.57 3.18
2691 3672 1.961277 GACCGGCACACCAGAACAG 60.961 63.158 0.00 0.00 34.57 3.16
2692 3673 3.357079 CCGGCACACCAGAACAGC 61.357 66.667 0.00 0.00 34.57 4.40
2693 3674 2.591429 CGGCACACCAGAACAGCA 60.591 61.111 0.00 0.00 34.57 4.41
2694 3675 2.186160 CGGCACACCAGAACAGCAA 61.186 57.895 0.00 0.00 34.57 3.91
2695 3676 1.360192 GGCACACCAGAACAGCAAC 59.640 57.895 0.00 0.00 35.26 4.17
2696 3677 1.360192 GCACACCAGAACAGCAACC 59.640 57.895 0.00 0.00 0.00 3.77
2697 3678 1.383456 GCACACCAGAACAGCAACCA 61.383 55.000 0.00 0.00 0.00 3.67
2698 3679 0.381801 CACACCAGAACAGCAACCAC 59.618 55.000 0.00 0.00 0.00 4.16
2699 3680 0.751643 ACACCAGAACAGCAACCACC 60.752 55.000 0.00 0.00 0.00 4.61
2700 3681 1.525995 ACCAGAACAGCAACCACCG 60.526 57.895 0.00 0.00 0.00 4.94
2701 3682 1.525995 CCAGAACAGCAACCACCGT 60.526 57.895 0.00 0.00 0.00 4.83
2702 3683 1.507141 CCAGAACAGCAACCACCGTC 61.507 60.000 0.00 0.00 0.00 4.79
2703 3684 1.594293 AGAACAGCAACCACCGTCG 60.594 57.895 0.00 0.00 0.00 5.12
2704 3685 1.593209 GAACAGCAACCACCGTCGA 60.593 57.895 0.00 0.00 0.00 4.20
2705 3686 0.949105 GAACAGCAACCACCGTCGAT 60.949 55.000 0.00 0.00 0.00 3.59
2706 3687 1.227999 AACAGCAACCACCGTCGATG 61.228 55.000 0.00 0.00 0.00 3.84
2707 3688 1.374125 CAGCAACCACCGTCGATGA 60.374 57.895 6.11 0.00 0.00 2.92
2708 3689 0.740868 CAGCAACCACCGTCGATGAT 60.741 55.000 6.11 0.00 0.00 2.45
2709 3690 0.740868 AGCAACCACCGTCGATGATG 60.741 55.000 6.11 0.00 0.00 3.07
2710 3691 0.739462 GCAACCACCGTCGATGATGA 60.739 55.000 6.11 0.00 0.00 2.92
2711 3692 1.280982 CAACCACCGTCGATGATGAG 58.719 55.000 6.11 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.629504 GTCGATCCTTACGCGTTGC 59.370 57.895 20.78 0.00 0.00 4.17
8 9 0.179145 AGGTCGATCCTTACGCGTTG 60.179 55.000 20.78 11.30 45.67 4.10
9 10 0.179145 CAGGTCGATCCTTACGCGTT 60.179 55.000 20.78 0.00 45.67 4.84
10 11 1.432251 CAGGTCGATCCTTACGCGT 59.568 57.895 19.17 19.17 45.67 6.01
11 12 1.944676 GCAGGTCGATCCTTACGCG 60.945 63.158 3.53 3.53 45.67 6.01
12 13 1.141019 TGCAGGTCGATCCTTACGC 59.859 57.895 4.08 6.04 45.67 4.42
13 14 0.866061 CGTGCAGGTCGATCCTTACG 60.866 60.000 17.60 17.60 45.67 3.18
14 15 0.527817 CCGTGCAGGTCGATCCTTAC 60.528 60.000 5.57 6.15 45.67 2.34
15 16 1.813859 CCGTGCAGGTCGATCCTTA 59.186 57.895 5.57 0.00 45.67 2.69
70 71 4.193334 CCCGATCGCACTCGCAGA 62.193 66.667 10.32 0.00 38.40 4.26
200 205 6.995511 TGTATCCGTTAAAGGAAAATGGAG 57.004 37.500 14.34 0.00 43.48 3.86
210 215 5.900339 ACATGCGTATGTATCCGTTAAAG 57.100 39.130 18.03 0.00 45.45 1.85
222 227 6.236357 GTTCATAATCATCGACATGCGTATG 58.764 40.000 12.28 12.28 41.80 2.39
223 228 5.060940 CGTTCATAATCATCGACATGCGTAT 59.939 40.000 8.91 0.00 41.80 3.06
224 229 4.381566 CGTTCATAATCATCGACATGCGTA 59.618 41.667 8.91 0.00 41.80 4.42
225 230 3.182372 CGTTCATAATCATCGACATGCGT 59.818 43.478 8.91 0.00 41.80 5.24
226 231 3.182372 ACGTTCATAATCATCGACATGCG 59.818 43.478 0.00 0.00 42.69 4.73
227 232 4.448891 CACGTTCATAATCATCGACATGC 58.551 43.478 0.00 0.00 0.00 4.06
228 233 4.025813 TGCACGTTCATAATCATCGACATG 60.026 41.667 0.00 0.00 0.00 3.21
229 234 4.119136 TGCACGTTCATAATCATCGACAT 58.881 39.130 0.00 0.00 0.00 3.06
230 235 3.516615 TGCACGTTCATAATCATCGACA 58.483 40.909 0.00 0.00 0.00 4.35
231 236 4.445718 AGATGCACGTTCATAATCATCGAC 59.554 41.667 0.00 0.00 36.41 4.20
246 251 8.673626 ACAAGAACAAAATTAATAGATGCACG 57.326 30.769 0.00 0.00 0.00 5.34
284 293 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
285 294 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
286 295 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
287 296 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
315 324 9.396022 CATATGTAGTCACCATTTAAAACCTCT 57.604 33.333 0.00 0.00 0.00 3.69
316 325 8.621286 CCATATGTAGTCACCATTTAAAACCTC 58.379 37.037 1.24 0.00 0.00 3.85
317 326 8.333235 TCCATATGTAGTCACCATTTAAAACCT 58.667 33.333 1.24 0.00 0.00 3.50
318 327 8.514330 TCCATATGTAGTCACCATTTAAAACC 57.486 34.615 1.24 0.00 0.00 3.27
319 328 9.174166 ACTCCATATGTAGTCACCATTTAAAAC 57.826 33.333 1.24 0.00 0.00 2.43
324 333 9.920946 ATTTTACTCCATATGTAGTCACCATTT 57.079 29.630 3.94 0.00 0.00 2.32
325 334 9.342308 CATTTTACTCCATATGTAGTCACCATT 57.658 33.333 3.94 0.00 0.00 3.16
326 335 8.713971 TCATTTTACTCCATATGTAGTCACCAT 58.286 33.333 3.94 0.00 0.00 3.55
327 336 8.084985 TCATTTTACTCCATATGTAGTCACCA 57.915 34.615 3.94 0.00 0.00 4.17
328 337 8.204836 ACTCATTTTACTCCATATGTAGTCACC 58.795 37.037 3.94 0.00 0.00 4.02
329 338 9.035607 CACTCATTTTACTCCATATGTAGTCAC 57.964 37.037 3.94 0.00 0.00 3.67
330 339 8.977412 TCACTCATTTTACTCCATATGTAGTCA 58.023 33.333 3.94 0.00 0.00 3.41
331 340 9.817809 TTCACTCATTTTACTCCATATGTAGTC 57.182 33.333 3.94 0.00 0.00 2.59
338 347 9.817809 GTGTAGATTCACTCATTTTACTCCATA 57.182 33.333 0.00 0.00 35.68 2.74
339 348 8.543774 AGTGTAGATTCACTCATTTTACTCCAT 58.456 33.333 0.00 0.00 44.07 3.41
340 349 7.907389 AGTGTAGATTCACTCATTTTACTCCA 58.093 34.615 0.00 0.00 44.07 3.86
373 382 9.901172 TCACTACATACGGATGTATATAGACAT 57.099 33.333 20.64 12.70 45.42 3.06
374 383 9.159364 GTCACTACATACGGATGTATATAGACA 57.841 37.037 20.64 2.07 45.42 3.41
375 384 8.610896 GGTCACTACATACGGATGTATATAGAC 58.389 40.741 20.64 21.25 45.42 2.59
376 385 8.323567 TGGTCACTACATACGGATGTATATAGA 58.676 37.037 20.64 12.78 45.42 1.98
377 386 8.502105 TGGTCACTACATACGGATGTATATAG 57.498 38.462 20.64 13.28 45.42 1.31
378 387 9.470399 AATGGTCACTACATACGGATGTATATA 57.530 33.333 20.64 6.48 45.42 0.86
379 388 7.956328 ATGGTCACTACATACGGATGTATAT 57.044 36.000 20.64 9.64 45.42 0.86
380 389 7.770366 AATGGTCACTACATACGGATGTATA 57.230 36.000 20.64 7.17 45.42 1.47
381 390 6.665992 AATGGTCACTACATACGGATGTAT 57.334 37.500 20.64 8.64 45.42 2.29
382 391 6.097129 TCAAATGGTCACTACATACGGATGTA 59.903 38.462 19.32 19.32 44.77 2.29
384 393 5.356426 TCAAATGGTCACTACATACGGATG 58.644 41.667 5.94 5.94 39.16 3.51
385 394 5.607939 TCAAATGGTCACTACATACGGAT 57.392 39.130 0.00 0.00 0.00 4.18
386 395 5.408880 TTCAAATGGTCACTACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
387 396 6.538742 AGATTTCAAATGGTCACTACATACGG 59.461 38.462 0.00 0.00 0.00 4.02
388 397 7.492669 AGAGATTTCAAATGGTCACTACATACG 59.507 37.037 0.00 0.00 0.00 3.06
389 398 8.723942 AGAGATTTCAAATGGTCACTACATAC 57.276 34.615 0.00 0.00 0.00 2.39
391 400 8.762645 TCTAGAGATTTCAAATGGTCACTACAT 58.237 33.333 0.00 0.00 0.00 2.29
392 401 8.134202 TCTAGAGATTTCAAATGGTCACTACA 57.866 34.615 0.00 0.00 0.00 2.74
393 402 9.436957 TTTCTAGAGATTTCAAATGGTCACTAC 57.563 33.333 0.00 0.00 0.00 2.73
394 403 9.658799 CTTTCTAGAGATTTCAAATGGTCACTA 57.341 33.333 0.00 0.00 0.00 2.74
395 404 8.378565 TCTTTCTAGAGATTTCAAATGGTCACT 58.621 33.333 0.00 0.00 0.00 3.41
396 405 8.447053 GTCTTTCTAGAGATTTCAAATGGTCAC 58.553 37.037 0.00 0.00 0.00 3.67
397 406 8.156820 TGTCTTTCTAGAGATTTCAAATGGTCA 58.843 33.333 0.00 0.00 0.00 4.02
398 407 8.553459 TGTCTTTCTAGAGATTTCAAATGGTC 57.447 34.615 0.00 0.00 0.00 4.02
399 408 8.924511 TTGTCTTTCTAGAGATTTCAAATGGT 57.075 30.769 0.00 0.00 0.00 3.55
412 421 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
413 422 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
414 423 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
415 424 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
416 425 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
417 426 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
418 427 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
419 428 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
420 429 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
421 430 5.681639 CTCCCTCCGTTCCTAAATATTTGT 58.318 41.667 11.05 0.00 0.00 2.83
422 431 4.515567 GCTCCCTCCGTTCCTAAATATTTG 59.484 45.833 11.05 1.40 0.00 2.32
423 432 4.165372 TGCTCCCTCCGTTCCTAAATATTT 59.835 41.667 5.89 5.89 0.00 1.40
424 433 3.714798 TGCTCCCTCCGTTCCTAAATATT 59.285 43.478 0.00 0.00 0.00 1.28
425 434 3.071167 GTGCTCCCTCCGTTCCTAAATAT 59.929 47.826 0.00 0.00 0.00 1.28
426 435 2.433239 GTGCTCCCTCCGTTCCTAAATA 59.567 50.000 0.00 0.00 0.00 1.40
427 436 1.209747 GTGCTCCCTCCGTTCCTAAAT 59.790 52.381 0.00 0.00 0.00 1.40
428 437 0.611714 GTGCTCCCTCCGTTCCTAAA 59.388 55.000 0.00 0.00 0.00 1.85
429 438 0.543410 TGTGCTCCCTCCGTTCCTAA 60.543 55.000 0.00 0.00 0.00 2.69
430 439 0.325296 ATGTGCTCCCTCCGTTCCTA 60.325 55.000 0.00 0.00 0.00 2.94
431 440 1.613630 ATGTGCTCCCTCCGTTCCT 60.614 57.895 0.00 0.00 0.00 3.36
432 441 1.153349 GATGTGCTCCCTCCGTTCC 60.153 63.158 0.00 0.00 0.00 3.62
433 442 0.036388 TTGATGTGCTCCCTCCGTTC 60.036 55.000 0.00 0.00 0.00 3.95
434 443 0.620556 ATTGATGTGCTCCCTCCGTT 59.379 50.000 0.00 0.00 0.00 4.44
435 444 1.139058 GTATTGATGTGCTCCCTCCGT 59.861 52.381 0.00 0.00 0.00 4.69
436 445 1.869754 CGTATTGATGTGCTCCCTCCG 60.870 57.143 0.00 0.00 0.00 4.63
437 446 1.139058 ACGTATTGATGTGCTCCCTCC 59.861 52.381 0.00 0.00 0.00 4.30
438 447 2.205074 CACGTATTGATGTGCTCCCTC 58.795 52.381 0.00 0.00 35.83 4.30
439 448 1.555075 ACACGTATTGATGTGCTCCCT 59.445 47.619 0.00 0.00 45.11 4.20
440 449 1.665679 CACACGTATTGATGTGCTCCC 59.334 52.381 0.00 0.00 45.11 4.30
452 461 4.868171 AGTTGAACGATAATGCACACGTAT 59.132 37.500 9.06 0.00 38.00 3.06
456 465 5.387342 GCAAAAGTTGAACGATAATGCACAC 60.387 40.000 0.00 0.00 0.00 3.82
467 476 4.854399 TGGAAGTATGCAAAAGTTGAACG 58.146 39.130 0.00 0.00 0.00 3.95
630 1447 9.978044 AATATCTGGTTATTAGACGGAACTTAC 57.022 33.333 0.00 0.00 0.00 2.34
648 1465 5.733226 TTAACATCACGTGCAATATCTGG 57.267 39.130 11.67 0.00 0.00 3.86
661 1478 8.970691 AATCTTAACTGCAACATTAACATCAC 57.029 30.769 0.00 0.00 0.00 3.06
727 1544 8.426489 TGTACTGTAATTATAACAGGATGGACC 58.574 37.037 10.76 0.00 46.97 4.46
777 1595 5.772521 TCTGGACAAAGCTCAAATTTAAGC 58.227 37.500 5.07 5.07 38.84 3.09
831 1660 2.376109 CTGGACCAGTCGTGTAGGTAT 58.624 52.381 13.84 0.00 35.36 2.73
935 1781 0.322546 AGGAAATTCAGGTGGCGTCC 60.323 55.000 0.00 0.00 0.00 4.79
964 1815 5.057843 AGCCGATATATATAGGGACGGAA 57.942 43.478 19.86 0.00 41.09 4.30
968 1819 5.000570 AGGGAGCCGATATATATAGGGAC 57.999 47.826 19.86 7.45 0.00 4.46
970 1821 4.202684 TGGAGGGAGCCGATATATATAGGG 60.203 50.000 19.86 13.70 0.00 3.53
972 1823 5.386060 TGTGGAGGGAGCCGATATATATAG 58.614 45.833 0.00 0.00 0.00 1.31
984 1857 1.004745 TCTTTTGGATGTGGAGGGAGC 59.995 52.381 0.00 0.00 0.00 4.70
1055 1928 0.177604 CTGCGAGAGAGCTTGGGAAT 59.822 55.000 0.00 0.00 38.13 3.01
1059 1932 1.519013 GAGCTGCGAGAGAGCTTGG 60.519 63.158 0.00 0.00 42.05 3.61
1082 1955 0.930726 GAGGAAGAGGAGGAGGAGGA 59.069 60.000 0.00 0.00 0.00 3.71
1083 1956 0.105709 GGAGGAAGAGGAGGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
1084 1957 0.933700 AGGAGGAAGAGGAGGAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
1166 2039 1.153086 TAGTCGTAGCCGAGGTCCC 60.153 63.158 0.00 0.00 45.26 4.46
1201 2074 2.980233 GCTGTCCTTGCACGCCTT 60.980 61.111 0.00 0.00 0.00 4.35
1314 2187 4.778415 CTGTCGTCCCCGTGCGAG 62.778 72.222 0.00 0.00 37.82 5.03
1320 2193 2.442272 ATCCTCCTGTCGTCCCCG 60.442 66.667 0.00 0.00 0.00 5.73
1621 2494 9.627123 CTGGTCTAAAATTGTATTCCAGGATTA 57.373 33.333 13.97 0.00 37.94 1.75
1622 2495 8.336235 TCTGGTCTAAAATTGTATTCCAGGATT 58.664 33.333 18.34 0.00 40.77 3.01
1623 2496 7.872138 TCTGGTCTAAAATTGTATTCCAGGAT 58.128 34.615 18.34 0.00 40.77 3.24
1634 2507 6.093495 TGCGGAGTTTATCTGGTCTAAAATTG 59.907 38.462 0.00 0.00 34.56 2.32
1638 2511 4.811969 TGCGGAGTTTATCTGGTCTAAA 57.188 40.909 0.00 0.00 34.56 1.85
1639 2512 4.811969 TTGCGGAGTTTATCTGGTCTAA 57.188 40.909 0.00 0.00 34.56 2.10
1641 2514 3.197766 TGATTGCGGAGTTTATCTGGTCT 59.802 43.478 0.00 0.00 34.56 3.85
1642 2515 3.309954 GTGATTGCGGAGTTTATCTGGTC 59.690 47.826 0.00 0.00 34.56 4.02
1644 2517 2.285220 CGTGATTGCGGAGTTTATCTGG 59.715 50.000 0.00 0.00 34.56 3.86
1645 2518 2.930040 ACGTGATTGCGGAGTTTATCTG 59.070 45.455 0.00 0.00 37.36 2.90
1646 2519 3.247006 ACGTGATTGCGGAGTTTATCT 57.753 42.857 0.00 0.00 35.98 1.98
1647 2520 4.088648 CAAACGTGATTGCGGAGTTTATC 58.911 43.478 0.00 0.00 34.19 1.75
1648 2521 3.119990 CCAAACGTGATTGCGGAGTTTAT 60.120 43.478 0.00 0.00 34.19 1.40
1649 2522 2.224549 CCAAACGTGATTGCGGAGTTTA 59.775 45.455 0.00 0.00 34.19 2.01
1650 2523 1.001815 CCAAACGTGATTGCGGAGTTT 60.002 47.619 0.00 0.00 35.68 2.66
1651 2524 0.591170 CCAAACGTGATTGCGGAGTT 59.409 50.000 0.00 0.00 35.98 3.01
1652 2525 1.852067 GCCAAACGTGATTGCGGAGT 61.852 55.000 0.00 0.00 35.98 3.85
1653 2526 1.154225 GCCAAACGTGATTGCGGAG 60.154 57.895 0.00 0.00 35.98 4.63
1655 2528 2.126502 GGCCAAACGTGATTGCGG 60.127 61.111 0.00 0.00 35.98 5.69
1656 2529 2.501650 CGGCCAAACGTGATTGCG 60.502 61.111 2.24 0.00 37.94 4.85
1657 2530 2.804931 GCGGCCAAACGTGATTGC 60.805 61.111 2.24 0.00 35.98 3.56
1659 2532 1.452145 AAGTGCGGCCAAACGTGATT 61.452 50.000 2.24 0.00 35.98 2.57
1660 2533 1.452145 AAAGTGCGGCCAAACGTGAT 61.452 50.000 2.24 0.00 35.98 3.06
1661 2534 2.054140 GAAAGTGCGGCCAAACGTGA 62.054 55.000 2.24 0.00 35.98 4.35
1662 2535 1.657181 GAAAGTGCGGCCAAACGTG 60.657 57.895 2.24 0.00 35.98 4.49
1663 2536 2.719354 GAAAGTGCGGCCAAACGT 59.281 55.556 2.24 0.00 35.98 3.99
1664 2537 2.050442 GGAAAGTGCGGCCAAACG 60.050 61.111 2.24 0.00 0.00 3.60
1665 2538 0.104120 AAAGGAAAGTGCGGCCAAAC 59.896 50.000 2.24 0.00 0.00 2.93
1666 2539 0.103937 CAAAGGAAAGTGCGGCCAAA 59.896 50.000 2.24 0.00 0.00 3.28
1667 2540 1.040339 ACAAAGGAAAGTGCGGCCAA 61.040 50.000 2.24 0.00 0.00 4.52
1668 2541 1.040339 AACAAAGGAAAGTGCGGCCA 61.040 50.000 2.24 0.00 0.00 5.36
1669 2542 0.597377 CAACAAAGGAAAGTGCGGCC 60.597 55.000 0.00 0.00 0.00 6.13
1670 2543 0.102300 ACAACAAAGGAAAGTGCGGC 59.898 50.000 0.00 0.00 0.00 6.53
1671 2544 2.099098 AGAACAACAAAGGAAAGTGCGG 59.901 45.455 0.00 0.00 0.00 5.69
1672 2545 3.420839 AGAACAACAAAGGAAAGTGCG 57.579 42.857 0.00 0.00 0.00 5.34
1673 2546 9.476202 AATTTATAGAACAACAAAGGAAAGTGC 57.524 29.630 0.00 0.00 0.00 4.40
1696 2569 9.668497 GAAGTTGTTTACAGAGGGAGTATAATT 57.332 33.333 0.00 0.00 0.00 1.40
1697 2570 8.822805 TGAAGTTGTTTACAGAGGGAGTATAAT 58.177 33.333 0.00 0.00 0.00 1.28
1698 2571 8.197592 TGAAGTTGTTTACAGAGGGAGTATAA 57.802 34.615 0.00 0.00 0.00 0.98
1699 2572 7.453752 ACTGAAGTTGTTTACAGAGGGAGTATA 59.546 37.037 0.00 0.00 34.88 1.47
1700 2573 6.270231 ACTGAAGTTGTTTACAGAGGGAGTAT 59.730 38.462 0.00 0.00 34.88 2.12
1701 2574 5.601313 ACTGAAGTTGTTTACAGAGGGAGTA 59.399 40.000 0.00 0.00 34.88 2.59
1702 2575 4.409247 ACTGAAGTTGTTTACAGAGGGAGT 59.591 41.667 0.00 0.00 34.88 3.85
1703 2576 4.752101 CACTGAAGTTGTTTACAGAGGGAG 59.248 45.833 0.00 0.00 34.88 4.30
1704 2577 4.444306 CCACTGAAGTTGTTTACAGAGGGA 60.444 45.833 0.00 0.00 37.43 4.20
1705 2578 3.815401 CCACTGAAGTTGTTTACAGAGGG 59.185 47.826 0.00 0.00 37.43 4.30
1706 2579 4.703897 TCCACTGAAGTTGTTTACAGAGG 58.296 43.478 0.00 0.00 40.56 3.69
1707 2580 6.867662 AATCCACTGAAGTTGTTTACAGAG 57.132 37.500 0.00 0.00 34.88 3.35
1708 2581 7.639113 AAAATCCACTGAAGTTGTTTACAGA 57.361 32.000 0.00 0.00 34.88 3.41
1709 2582 9.965824 ATAAAAATCCACTGAAGTTGTTTACAG 57.034 29.630 0.00 0.00 36.58 2.74
1713 2586 9.665719 AACAATAAAAATCCACTGAAGTTGTTT 57.334 25.926 0.00 0.00 33.73 2.83
1714 2587 9.313118 GAACAATAAAAATCCACTGAAGTTGTT 57.687 29.630 0.00 0.00 38.36 2.83
1715 2588 8.695456 AGAACAATAAAAATCCACTGAAGTTGT 58.305 29.630 0.00 0.00 0.00 3.32
1716 2589 9.533253 AAGAACAATAAAAATCCACTGAAGTTG 57.467 29.630 0.00 0.00 0.00 3.16
1734 2607 8.870879 GCGTTTAGATCACTACTTAAGAACAAT 58.129 33.333 10.09 0.00 0.00 2.71
1735 2608 8.086522 AGCGTTTAGATCACTACTTAAGAACAA 58.913 33.333 10.09 0.00 0.00 2.83
1736 2609 7.600065 AGCGTTTAGATCACTACTTAAGAACA 58.400 34.615 10.09 0.00 0.00 3.18
1737 2610 7.969508 AGAGCGTTTAGATCACTACTTAAGAAC 59.030 37.037 10.09 0.00 37.82 3.01
1738 2611 8.053026 AGAGCGTTTAGATCACTACTTAAGAA 57.947 34.615 10.09 0.00 37.82 2.52
1739 2612 7.627298 AGAGCGTTTAGATCACTACTTAAGA 57.373 36.000 10.09 0.00 37.82 2.10
1740 2613 9.953697 ATAAGAGCGTTTAGATCACTACTTAAG 57.046 33.333 0.00 0.00 37.82 1.85
1776 2649 8.455682 CCTTGTTACTTACTTTCACACTTTTCA 58.544 33.333 0.00 0.00 0.00 2.69
1777 2650 8.456471 ACCTTGTTACTTACTTTCACACTTTTC 58.544 33.333 0.00 0.00 0.00 2.29
1778 2651 8.344446 ACCTTGTTACTTACTTTCACACTTTT 57.656 30.769 0.00 0.00 0.00 2.27
1779 2652 7.608761 TGACCTTGTTACTTACTTTCACACTTT 59.391 33.333 0.00 0.00 0.00 2.66
1780 2653 7.107542 TGACCTTGTTACTTACTTTCACACTT 58.892 34.615 0.00 0.00 0.00 3.16
1781 2654 6.646267 TGACCTTGTTACTTACTTTCACACT 58.354 36.000 0.00 0.00 0.00 3.55
1782 2655 6.537660 ACTGACCTTGTTACTTACTTTCACAC 59.462 38.462 0.00 0.00 0.00 3.82
1783 2656 6.537301 CACTGACCTTGTTACTTACTTTCACA 59.463 38.462 0.00 0.00 0.00 3.58
1784 2657 6.018180 CCACTGACCTTGTTACTTACTTTCAC 60.018 42.308 0.00 0.00 0.00 3.18
1785 2658 6.053005 CCACTGACCTTGTTACTTACTTTCA 58.947 40.000 0.00 0.00 0.00 2.69
1786 2659 6.285990 TCCACTGACCTTGTTACTTACTTTC 58.714 40.000 0.00 0.00 0.00 2.62
1787 2660 6.243216 TCCACTGACCTTGTTACTTACTTT 57.757 37.500 0.00 0.00 0.00 2.66
1788 2661 5.881923 TCCACTGACCTTGTTACTTACTT 57.118 39.130 0.00 0.00 0.00 2.24
1789 2662 6.435292 AATCCACTGACCTTGTTACTTACT 57.565 37.500 0.00 0.00 0.00 2.24
1790 2663 7.506328 AAAATCCACTGACCTTGTTACTTAC 57.494 36.000 0.00 0.00 0.00 2.34
1791 2664 7.013846 CCAAAAATCCACTGACCTTGTTACTTA 59.986 37.037 0.00 0.00 0.00 2.24
1792 2665 6.183360 CCAAAAATCCACTGACCTTGTTACTT 60.183 38.462 0.00 0.00 0.00 2.24
1793 2666 5.301805 CCAAAAATCCACTGACCTTGTTACT 59.698 40.000 0.00 0.00 0.00 2.24
1794 2667 5.528870 CCAAAAATCCACTGACCTTGTTAC 58.471 41.667 0.00 0.00 0.00 2.50
1795 2668 4.038642 GCCAAAAATCCACTGACCTTGTTA 59.961 41.667 0.00 0.00 0.00 2.41
1796 2669 3.181466 GCCAAAAATCCACTGACCTTGTT 60.181 43.478 0.00 0.00 0.00 2.83
1797 2670 2.365293 GCCAAAAATCCACTGACCTTGT 59.635 45.455 0.00 0.00 0.00 3.16
1798 2671 2.289010 GGCCAAAAATCCACTGACCTTG 60.289 50.000 0.00 0.00 0.00 3.61
1799 2672 1.970640 GGCCAAAAATCCACTGACCTT 59.029 47.619 0.00 0.00 0.00 3.50
1800 2673 1.147817 AGGCCAAAAATCCACTGACCT 59.852 47.619 5.01 0.00 0.00 3.85
1801 2674 1.546029 GAGGCCAAAAATCCACTGACC 59.454 52.381 5.01 0.00 0.00 4.02
1802 2675 2.238521 TGAGGCCAAAAATCCACTGAC 58.761 47.619 5.01 0.00 0.00 3.51
1803 2676 2.673775 TGAGGCCAAAAATCCACTGA 57.326 45.000 5.01 0.00 0.00 3.41
1804 2677 2.093869 CCATGAGGCCAAAAATCCACTG 60.094 50.000 5.01 0.00 0.00 3.66
1805 2678 2.181975 CCATGAGGCCAAAAATCCACT 58.818 47.619 5.01 0.00 0.00 4.00
1806 2679 2.678471 CCATGAGGCCAAAAATCCAC 57.322 50.000 5.01 0.00 0.00 4.02
1818 2691 2.664185 CATCCGCGAGCCATGAGG 60.664 66.667 8.23 0.00 38.23 3.86
1819 2692 3.344215 GCATCCGCGAGCCATGAG 61.344 66.667 8.23 0.00 0.00 2.90
1820 2693 3.853487 AGCATCCGCGAGCCATGA 61.853 61.111 8.23 0.00 45.49 3.07
1821 2694 3.646976 CAGCATCCGCGAGCCATG 61.647 66.667 8.23 5.27 45.49 3.66
1822 2695 4.166888 ACAGCATCCGCGAGCCAT 62.167 61.111 8.23 0.00 45.49 4.40
1823 2696 4.819761 GACAGCATCCGCGAGCCA 62.820 66.667 8.23 0.00 45.49 4.75
1831 2704 0.320247 CTAGGCATCGGACAGCATCC 60.320 60.000 6.60 0.00 45.20 3.51
1832 2705 0.676184 TCTAGGCATCGGACAGCATC 59.324 55.000 6.60 0.00 0.00 3.91
1833 2706 1.274728 GATCTAGGCATCGGACAGCAT 59.725 52.381 6.60 2.22 0.00 3.79
1834 2707 0.676184 GATCTAGGCATCGGACAGCA 59.324 55.000 6.60 0.00 0.00 4.41
1835 2708 0.965439 AGATCTAGGCATCGGACAGC 59.035 55.000 0.00 0.00 0.00 4.40
1836 2709 1.543802 GGAGATCTAGGCATCGGACAG 59.456 57.143 0.00 0.00 0.00 3.51
1837 2710 1.621992 GGAGATCTAGGCATCGGACA 58.378 55.000 0.00 0.00 0.00 4.02
1838 2711 0.523966 CGGAGATCTAGGCATCGGAC 59.476 60.000 0.00 0.00 0.00 4.79
1839 2712 1.244697 GCGGAGATCTAGGCATCGGA 61.245 60.000 11.52 0.00 0.00 4.55
1840 2713 1.214062 GCGGAGATCTAGGCATCGG 59.786 63.158 11.52 0.00 0.00 4.18
1841 2714 0.529833 ATGCGGAGATCTAGGCATCG 59.470 55.000 21.29 9.39 42.01 3.84
1842 2715 3.131933 ACATATGCGGAGATCTAGGCATC 59.868 47.826 27.16 2.96 44.35 3.91
1843 2716 3.102972 ACATATGCGGAGATCTAGGCAT 58.897 45.455 26.76 26.76 46.82 4.40
1844 2717 2.232208 CACATATGCGGAGATCTAGGCA 59.768 50.000 19.08 19.08 40.06 4.75
1845 2718 2.493675 TCACATATGCGGAGATCTAGGC 59.506 50.000 1.58 9.88 0.00 3.93
1846 2719 4.400567 TCATCACATATGCGGAGATCTAGG 59.599 45.833 1.58 0.00 0.00 3.02
1847 2720 5.573337 TCATCACATATGCGGAGATCTAG 57.427 43.478 1.58 0.00 0.00 2.43
1848 2721 5.163478 CCATCATCACATATGCGGAGATCTA 60.163 44.000 1.58 0.00 0.00 1.98
1849 2722 4.382793 CCATCATCACATATGCGGAGATCT 60.383 45.833 1.58 0.00 0.00 2.75
1850 2723 3.869832 CCATCATCACATATGCGGAGATC 59.130 47.826 1.58 0.00 0.00 2.75
1851 2724 3.262660 ACCATCATCACATATGCGGAGAT 59.737 43.478 1.58 0.00 0.00 2.75
1852 2725 2.634453 ACCATCATCACATATGCGGAGA 59.366 45.455 1.58 0.00 0.00 3.71
1853 2726 2.740447 CACCATCATCACATATGCGGAG 59.260 50.000 1.58 0.00 0.00 4.63
1854 2727 2.368221 TCACCATCATCACATATGCGGA 59.632 45.455 1.58 1.05 0.00 5.54
1855 2728 2.769893 TCACCATCATCACATATGCGG 58.230 47.619 1.58 0.00 0.00 5.69
1856 2729 3.811497 ACTTCACCATCATCACATATGCG 59.189 43.478 1.58 0.00 0.00 4.73
1857 2730 5.762825 AACTTCACCATCATCACATATGC 57.237 39.130 1.58 0.00 0.00 3.14
1858 2731 7.281549 TGAGAAACTTCACCATCATCACATATG 59.718 37.037 0.00 0.00 0.00 1.78
1859 2732 7.341030 TGAGAAACTTCACCATCATCACATAT 58.659 34.615 0.00 0.00 0.00 1.78
1860 2733 6.710278 TGAGAAACTTCACCATCATCACATA 58.290 36.000 0.00 0.00 0.00 2.29
1861 2734 5.563592 TGAGAAACTTCACCATCATCACAT 58.436 37.500 0.00 0.00 0.00 3.21
1862 2735 4.971939 TGAGAAACTTCACCATCATCACA 58.028 39.130 0.00 0.00 0.00 3.58
1863 2736 5.947228 TTGAGAAACTTCACCATCATCAC 57.053 39.130 0.00 0.00 0.00 3.06
1864 2737 6.957920 TTTTGAGAAACTTCACCATCATCA 57.042 33.333 0.00 0.00 0.00 3.07
1888 2761 9.976511 CTGCTATTTCACCATGATCATATTTTT 57.023 29.630 8.15 0.00 0.00 1.94
1889 2762 9.139734 ACTGCTATTTCACCATGATCATATTTT 57.860 29.630 8.15 0.00 0.00 1.82
1890 2763 8.701908 ACTGCTATTTCACCATGATCATATTT 57.298 30.769 8.15 0.00 0.00 1.40
1891 2764 7.940688 TGACTGCTATTTCACCATGATCATATT 59.059 33.333 8.15 0.00 0.00 1.28
1892 2765 7.389884 GTGACTGCTATTTCACCATGATCATAT 59.610 37.037 8.15 0.00 36.85 1.78
1893 2766 6.707608 GTGACTGCTATTTCACCATGATCATA 59.292 38.462 8.15 0.00 36.85 2.15
1894 2767 5.530171 GTGACTGCTATTTCACCATGATCAT 59.470 40.000 1.18 1.18 36.85 2.45
1895 2768 4.877823 GTGACTGCTATTTCACCATGATCA 59.122 41.667 0.00 0.00 36.85 2.92
1896 2769 5.121811 AGTGACTGCTATTTCACCATGATC 58.878 41.667 0.00 0.00 42.73 2.92
1897 2770 5.108187 AGTGACTGCTATTTCACCATGAT 57.892 39.130 0.00 0.00 42.73 2.45
1898 2771 4.558226 AGTGACTGCTATTTCACCATGA 57.442 40.909 0.00 0.00 42.73 3.07
1899 2772 6.108687 TCTTAGTGACTGCTATTTCACCATG 58.891 40.000 0.00 0.00 42.73 3.66
1900 2773 6.299805 TCTTAGTGACTGCTATTTCACCAT 57.700 37.500 0.00 0.00 42.73 3.55
1901 2774 5.738619 TCTTAGTGACTGCTATTTCACCA 57.261 39.130 0.00 0.00 42.73 4.17
1902 2775 7.298854 GTTTTCTTAGTGACTGCTATTTCACC 58.701 38.462 0.00 0.00 42.73 4.02
1903 2776 7.010023 CGTTTTCTTAGTGACTGCTATTTCAC 58.990 38.462 0.00 0.00 42.17 3.18
1907 2780 4.392138 GCCGTTTTCTTAGTGACTGCTATT 59.608 41.667 0.00 0.00 0.00 1.73
1918 2791 4.085107 GCAAATTGTGTGCCGTTTTCTTAG 60.085 41.667 0.00 0.00 35.91 2.18
1984 2863 5.845103 TGAACATTGACAAACATTGATGCT 58.155 33.333 0.00 0.00 34.94 3.79
2017 2896 2.623915 GCATCTCATCCCATGCCGC 61.624 63.158 0.00 0.00 39.70 6.53
2053 2932 4.334443 CATCTCTTGCGTACAAAATTCGG 58.666 43.478 0.00 0.00 34.74 4.30
2110 2989 1.793714 CGTGTGGGCGTATTTGATTGC 60.794 52.381 0.00 0.00 0.00 3.56
2113 2992 2.676632 TACGTGTGGGCGTATTTGAT 57.323 45.000 0.00 0.00 45.06 2.57
2195 3093 3.371591 TGACGTTTCGCTGTAAAACACTT 59.628 39.130 0.00 0.00 36.60 3.16
2197 3095 3.024313 GTGACGTTTCGCTGTAAAACAC 58.976 45.455 0.00 0.00 36.60 3.32
2198 3096 2.671888 TGTGACGTTTCGCTGTAAAACA 59.328 40.909 0.00 0.00 36.60 2.83
2199 3097 3.307339 TGTGACGTTTCGCTGTAAAAC 57.693 42.857 0.00 0.00 33.01 2.43
2200 3098 3.672310 GTTGTGACGTTTCGCTGTAAAA 58.328 40.909 0.00 0.00 33.01 1.52
2237 3140 5.183331 TGCTACCGGTATCAGTATCAGATTC 59.817 44.000 16.25 0.00 0.00 2.52
2247 3150 3.320626 CATCATGTGCTACCGGTATCAG 58.679 50.000 18.16 8.48 0.00 2.90
2301 3226 4.832608 CTTACCCGCGGTGAGGCC 62.833 72.222 26.12 0.00 35.94 5.19
2425 3354 3.243737 GGATTATCGTGGCCAATTTTCCC 60.244 47.826 7.24 0.00 0.00 3.97
2467 3448 7.038445 TGGTAACATTTGGTTGGAAATCATGAT 60.038 33.333 1.18 1.18 46.17 2.45
2496 3477 8.763049 AAAAGAAAAGAAAAGAAGTGGAAGTG 57.237 30.769 0.00 0.00 0.00 3.16
2557 3538 9.512588 CATTGCTAGGGATCTAAAACATCTTAT 57.487 33.333 0.00 0.00 0.00 1.73
2558 3539 8.713971 TCATTGCTAGGGATCTAAAACATCTTA 58.286 33.333 0.00 0.00 0.00 2.10
2559 3540 7.577303 TCATTGCTAGGGATCTAAAACATCTT 58.423 34.615 0.00 0.00 0.00 2.40
2560 3541 7.141758 TCATTGCTAGGGATCTAAAACATCT 57.858 36.000 0.00 0.00 0.00 2.90
2561 3542 7.992754 ATCATTGCTAGGGATCTAAAACATC 57.007 36.000 0.00 0.00 0.00 3.06
2562 3543 8.636213 CAAATCATTGCTAGGGATCTAAAACAT 58.364 33.333 0.00 0.00 0.00 2.71
2563 3544 7.833682 TCAAATCATTGCTAGGGATCTAAAACA 59.166 33.333 0.00 0.00 36.45 2.83
2564 3545 8.225603 TCAAATCATTGCTAGGGATCTAAAAC 57.774 34.615 0.00 0.00 36.45 2.43
2565 3546 8.821686 TTCAAATCATTGCTAGGGATCTAAAA 57.178 30.769 0.00 0.00 36.45 1.52
2566 3547 8.686334 GTTTCAAATCATTGCTAGGGATCTAAA 58.314 33.333 0.00 0.00 36.45 1.85
2567 3548 7.833682 TGTTTCAAATCATTGCTAGGGATCTAA 59.166 33.333 0.00 0.00 36.45 2.10
2568 3549 7.345691 TGTTTCAAATCATTGCTAGGGATCTA 58.654 34.615 0.00 0.00 36.45 1.98
2569 3550 6.189859 TGTTTCAAATCATTGCTAGGGATCT 58.810 36.000 0.00 0.00 36.45 2.75
2570 3551 6.455360 TGTTTCAAATCATTGCTAGGGATC 57.545 37.500 0.00 0.00 36.45 3.36
2571 3552 7.427989 AATGTTTCAAATCATTGCTAGGGAT 57.572 32.000 0.00 0.00 36.45 3.85
2572 3553 6.855763 AATGTTTCAAATCATTGCTAGGGA 57.144 33.333 0.00 0.00 36.45 4.20
2585 3566 9.567848 GGCGAGAAAGAAATATAATGTTTCAAA 57.432 29.630 11.32 0.00 37.89 2.69
2586 3567 7.908082 CGGCGAGAAAGAAATATAATGTTTCAA 59.092 33.333 0.00 0.00 37.89 2.69
2587 3568 7.406553 CGGCGAGAAAGAAATATAATGTTTCA 58.593 34.615 0.00 0.00 37.89 2.69
2588 3569 6.851330 CCGGCGAGAAAGAAATATAATGTTTC 59.149 38.462 9.30 3.98 36.15 2.78
2589 3570 6.540914 TCCGGCGAGAAAGAAATATAATGTTT 59.459 34.615 9.30 0.00 0.00 2.83
2590 3571 6.053005 TCCGGCGAGAAAGAAATATAATGTT 58.947 36.000 9.30 0.00 0.00 2.71
2591 3572 5.607477 TCCGGCGAGAAAGAAATATAATGT 58.393 37.500 9.30 0.00 0.00 2.71
2592 3573 5.696724 ACTCCGGCGAGAAAGAAATATAATG 59.303 40.000 9.30 0.00 38.52 1.90
2593 3574 5.855045 ACTCCGGCGAGAAAGAAATATAAT 58.145 37.500 9.30 0.00 38.52 1.28
2594 3575 5.272283 ACTCCGGCGAGAAAGAAATATAA 57.728 39.130 9.30 0.00 38.52 0.98
2595 3576 4.556104 CGACTCCGGCGAGAAAGAAATATA 60.556 45.833 9.30 0.00 38.52 0.86
2596 3577 3.718815 GACTCCGGCGAGAAAGAAATAT 58.281 45.455 9.30 0.00 38.52 1.28
2597 3578 2.479049 CGACTCCGGCGAGAAAGAAATA 60.479 50.000 9.30 0.00 38.52 1.40
2598 3579 1.736032 CGACTCCGGCGAGAAAGAAAT 60.736 52.381 9.30 0.00 38.52 2.17
2599 3580 0.388134 CGACTCCGGCGAGAAAGAAA 60.388 55.000 9.30 0.00 38.52 2.52
2600 3581 1.211969 CGACTCCGGCGAGAAAGAA 59.788 57.895 9.30 0.00 38.52 2.52
2601 3582 2.875485 CGACTCCGGCGAGAAAGA 59.125 61.111 9.30 0.00 38.52 2.52
2611 3592 0.249741 ACAAGGTTTGTCCGACTCCG 60.250 55.000 0.00 0.00 40.56 4.63
2612 3593 1.602377 CAACAAGGTTTGTCCGACTCC 59.398 52.381 0.00 0.60 44.59 3.85
2613 3594 2.285977 ACAACAAGGTTTGTCCGACTC 58.714 47.619 0.00 0.00 44.59 3.36
2614 3595 2.413310 ACAACAAGGTTTGTCCGACT 57.587 45.000 0.00 0.00 44.59 4.18
2615 3596 3.200483 ACTACAACAAGGTTTGTCCGAC 58.800 45.455 0.00 0.00 44.59 4.79
2616 3597 3.547054 ACTACAACAAGGTTTGTCCGA 57.453 42.857 0.00 0.00 44.59 4.55
2617 3598 4.446719 GTCTACTACAACAAGGTTTGTCCG 59.553 45.833 0.00 0.00 44.59 4.79
2618 3599 5.362263 TGTCTACTACAACAAGGTTTGTCC 58.638 41.667 0.00 0.00 44.59 4.02
2619 3600 6.913873 TTGTCTACTACAACAAGGTTTGTC 57.086 37.500 0.00 0.00 44.59 3.18
2631 3612 4.456911 ACGACTTTCCGATTGTCTACTACA 59.543 41.667 0.00 0.00 35.88 2.74
2632 3613 4.979388 ACGACTTTCCGATTGTCTACTAC 58.021 43.478 0.00 0.00 0.00 2.73
2633 3614 4.201753 CGACGACTTTCCGATTGTCTACTA 60.202 45.833 0.00 0.00 0.00 1.82
2634 3615 3.425892 CGACGACTTTCCGATTGTCTACT 60.426 47.826 0.00 0.00 0.00 2.57
2635 3616 2.844804 CGACGACTTTCCGATTGTCTAC 59.155 50.000 0.00 0.00 0.00 2.59
2636 3617 2.485426 ACGACGACTTTCCGATTGTCTA 59.515 45.455 0.00 0.00 0.00 2.59
2637 3618 1.268899 ACGACGACTTTCCGATTGTCT 59.731 47.619 0.00 0.00 0.00 3.41
2638 3619 1.385743 CACGACGACTTTCCGATTGTC 59.614 52.381 0.00 0.00 0.00 3.18
2639 3620 1.415374 CACGACGACTTTCCGATTGT 58.585 50.000 0.00 0.00 0.00 2.71
2640 3621 0.093026 GCACGACGACTTTCCGATTG 59.907 55.000 0.00 0.00 0.00 2.67
2641 3622 0.038526 AGCACGACGACTTTCCGATT 60.039 50.000 0.00 0.00 0.00 3.34
2642 3623 0.806868 TAGCACGACGACTTTCCGAT 59.193 50.000 0.00 0.00 0.00 4.18
2643 3624 0.592637 TTAGCACGACGACTTTCCGA 59.407 50.000 0.00 0.00 0.00 4.55
2644 3625 1.320555 CATTAGCACGACGACTTTCCG 59.679 52.381 0.00 0.00 0.00 4.30
2645 3626 1.060698 GCATTAGCACGACGACTTTCC 59.939 52.381 0.00 0.00 41.58 3.13
2646 3627 1.993370 AGCATTAGCACGACGACTTTC 59.007 47.619 0.00 0.00 45.49 2.62
2647 3628 1.993370 GAGCATTAGCACGACGACTTT 59.007 47.619 0.00 0.00 45.49 2.66
2648 3629 1.630148 GAGCATTAGCACGACGACTT 58.370 50.000 0.00 0.00 45.49 3.01
2649 3630 0.179134 GGAGCATTAGCACGACGACT 60.179 55.000 0.00 0.59 45.49 4.18
2650 3631 0.457853 TGGAGCATTAGCACGACGAC 60.458 55.000 0.00 0.00 45.49 4.34
2651 3632 0.457853 GTGGAGCATTAGCACGACGA 60.458 55.000 0.00 0.00 45.49 4.20
2652 3633 0.735978 TGTGGAGCATTAGCACGACG 60.736 55.000 0.00 0.00 41.52 5.12
2653 3634 1.328680 CATGTGGAGCATTAGCACGAC 59.671 52.381 0.00 0.00 45.49 4.34
2654 3635 1.206849 TCATGTGGAGCATTAGCACGA 59.793 47.619 0.00 0.00 45.49 4.35
2655 3636 1.328680 GTCATGTGGAGCATTAGCACG 59.671 52.381 0.00 0.00 45.49 5.34
2656 3637 1.672881 GGTCATGTGGAGCATTAGCAC 59.327 52.381 0.00 0.00 45.49 4.40
2657 3638 1.743431 CGGTCATGTGGAGCATTAGCA 60.743 52.381 0.00 0.00 44.30 3.49
2658 3639 0.940126 CGGTCATGTGGAGCATTAGC 59.060 55.000 0.00 0.00 44.30 3.09
2659 3640 1.586422 CCGGTCATGTGGAGCATTAG 58.414 55.000 0.00 0.00 44.30 1.73
2660 3641 0.463654 GCCGGTCATGTGGAGCATTA 60.464 55.000 1.90 0.00 44.30 1.90
2661 3642 1.750399 GCCGGTCATGTGGAGCATT 60.750 57.895 1.90 0.00 44.30 3.56
2662 3643 2.124570 GCCGGTCATGTGGAGCAT 60.125 61.111 1.90 0.00 44.30 3.79
2663 3644 3.635191 TGCCGGTCATGTGGAGCA 61.635 61.111 1.90 2.99 44.30 4.26
2664 3645 3.127533 GTGCCGGTCATGTGGAGC 61.128 66.667 1.90 0.58 40.65 4.70
2665 3646 2.034879 GTGTGCCGGTCATGTGGAG 61.035 63.158 1.90 0.00 0.00 3.86
2666 3647 2.031919 GTGTGCCGGTCATGTGGA 59.968 61.111 1.90 0.00 0.00 4.02
2667 3648 3.055719 GGTGTGCCGGTCATGTGG 61.056 66.667 1.90 0.00 0.00 4.17
2668 3649 2.281414 TGGTGTGCCGGTCATGTG 60.281 61.111 1.90 0.00 37.67 3.21
2669 3650 2.032528 CTGGTGTGCCGGTCATGT 59.967 61.111 1.90 0.00 36.39 3.21
2670 3651 1.302431 TTCTGGTGTGCCGGTCATG 60.302 57.895 1.90 0.00 41.89 3.07
2671 3652 1.302511 GTTCTGGTGTGCCGGTCAT 60.303 57.895 1.90 0.00 41.89 3.06
2672 3653 2.110213 GTTCTGGTGTGCCGGTCA 59.890 61.111 1.90 0.00 41.89 4.02
2673 3654 1.961277 CTGTTCTGGTGTGCCGGTC 60.961 63.158 1.90 0.00 41.89 4.79
2674 3655 2.111043 CTGTTCTGGTGTGCCGGT 59.889 61.111 1.90 0.00 41.89 5.28
2675 3656 3.357079 GCTGTTCTGGTGTGCCGG 61.357 66.667 0.00 0.00 42.59 6.13
2676 3657 2.186160 TTGCTGTTCTGGTGTGCCG 61.186 57.895 0.00 0.00 37.67 5.69
2677 3658 1.360192 GTTGCTGTTCTGGTGTGCC 59.640 57.895 0.00 0.00 0.00 5.01
2678 3659 1.360192 GGTTGCTGTTCTGGTGTGC 59.640 57.895 0.00 0.00 0.00 4.57
2679 3660 0.381801 GTGGTTGCTGTTCTGGTGTG 59.618 55.000 0.00 0.00 0.00 3.82
2680 3661 0.751643 GGTGGTTGCTGTTCTGGTGT 60.752 55.000 0.00 0.00 0.00 4.16
2681 3662 1.785041 CGGTGGTTGCTGTTCTGGTG 61.785 60.000 0.00 0.00 0.00 4.17
2682 3663 1.525995 CGGTGGTTGCTGTTCTGGT 60.526 57.895 0.00 0.00 0.00 4.00
2683 3664 1.507141 GACGGTGGTTGCTGTTCTGG 61.507 60.000 0.00 0.00 0.00 3.86
2684 3665 1.831389 CGACGGTGGTTGCTGTTCTG 61.831 60.000 0.00 0.00 0.00 3.02
2685 3666 1.594293 CGACGGTGGTTGCTGTTCT 60.594 57.895 0.00 0.00 0.00 3.01
2686 3667 0.949105 ATCGACGGTGGTTGCTGTTC 60.949 55.000 0.00 0.00 0.00 3.18
2687 3668 1.070786 ATCGACGGTGGTTGCTGTT 59.929 52.632 0.00 0.00 0.00 3.16
2688 3669 1.667830 CATCGACGGTGGTTGCTGT 60.668 57.895 0.00 0.00 0.00 4.40
2689 3670 0.740868 ATCATCGACGGTGGTTGCTG 60.741 55.000 8.51 0.00 0.00 4.41
2690 3671 0.740868 CATCATCGACGGTGGTTGCT 60.741 55.000 8.51 0.00 0.00 3.91
2691 3672 0.739462 TCATCATCGACGGTGGTTGC 60.739 55.000 8.51 0.00 0.00 4.17
2692 3673 1.280982 CTCATCATCGACGGTGGTTG 58.719 55.000 8.51 6.93 0.00 3.77
2693 3674 3.741029 CTCATCATCGACGGTGGTT 57.259 52.632 8.51 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.