Multiple sequence alignment - TraesCS2A01G438600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G438600 | chr2A | 100.000 | 2636 | 0 | 0 | 1 | 2636 | 689762586 | 689759951 | 0.000000e+00 | 4868.0 |
1 | TraesCS2A01G438600 | chr2A | 89.043 | 1223 | 65 | 29 | 846 | 2029 | 689805429 | 689804237 | 0.000000e+00 | 1452.0 |
2 | TraesCS2A01G438600 | chr2A | 90.101 | 1091 | 59 | 14 | 994 | 2064 | 689769954 | 689768893 | 0.000000e+00 | 1371.0 |
3 | TraesCS2A01G438600 | chr2A | 100.000 | 45 | 0 | 0 | 920 | 964 | 689770064 | 689770020 | 1.680000e-12 | 84.2 |
4 | TraesCS2A01G438600 | chr2D | 90.437 | 1464 | 89 | 21 | 1061 | 2505 | 546806446 | 546807877 | 0.000000e+00 | 1881.0 |
5 | TraesCS2A01G438600 | chr2D | 87.164 | 1192 | 97 | 29 | 1057 | 2208 | 546682364 | 546683539 | 0.000000e+00 | 1303.0 |
6 | TraesCS2A01G438600 | chr2D | 85.605 | 1181 | 84 | 35 | 936 | 2064 | 546733207 | 546734353 | 0.000000e+00 | 1160.0 |
7 | TraesCS2A01G438600 | chr2D | 88.622 | 958 | 72 | 18 | 1061 | 2013 | 546637592 | 546638517 | 0.000000e+00 | 1131.0 |
8 | TraesCS2A01G438600 | chr2D | 85.787 | 788 | 94 | 10 | 1 | 775 | 546740137 | 546740919 | 0.000000e+00 | 819.0 |
9 | TraesCS2A01G438600 | chr2D | 87.898 | 157 | 19 | 0 | 994 | 1150 | 546779186 | 546779342 | 4.480000e-43 | 185.0 |
10 | TraesCS2A01G438600 | chr2D | 84.091 | 132 | 7 | 4 | 2068 | 2199 | 546734626 | 546734743 | 5.960000e-22 | 115.0 |
11 | TraesCS2A01G438600 | chr5A | 91.060 | 783 | 64 | 5 | 1085 | 1862 | 377361908 | 377362689 | 0.000000e+00 | 1053.0 |
12 | TraesCS2A01G438600 | chr5A | 77.634 | 465 | 76 | 14 | 287 | 727 | 445832084 | 445832544 | 9.360000e-65 | 257.0 |
13 | TraesCS2A01G438600 | chr2B | 93.260 | 638 | 43 | 0 | 1061 | 1698 | 653592251 | 653592888 | 0.000000e+00 | 941.0 |
14 | TraesCS2A01G438600 | chr2B | 85.056 | 629 | 89 | 3 | 1061 | 1684 | 653415671 | 653416299 | 1.030000e-178 | 636.0 |
15 | TraesCS2A01G438600 | chr2B | 86.415 | 265 | 35 | 1 | 21 | 284 | 436558025 | 436558289 | 3.320000e-74 | 289.0 |
16 | TraesCS2A01G438600 | chr2B | 82.313 | 294 | 31 | 12 | 2233 | 2510 | 653593202 | 653593490 | 4.390000e-58 | 235.0 |
17 | TraesCS2A01G438600 | chr2B | 81.887 | 265 | 46 | 2 | 1 | 263 | 34446138 | 34446402 | 3.410000e-54 | 222.0 |
18 | TraesCS2A01G438600 | chr2B | 80.714 | 280 | 51 | 3 | 3 | 280 | 34524458 | 34524736 | 5.710000e-52 | 215.0 |
19 | TraesCS2A01G438600 | chr2B | 91.195 | 159 | 10 | 3 | 1872 | 2026 | 653592990 | 653593148 | 2.060000e-51 | 213.0 |
20 | TraesCS2A01G438600 | chr2B | 82.787 | 244 | 23 | 4 | 920 | 1145 | 653583223 | 653583465 | 1.600000e-47 | 200.0 |
21 | TraesCS2A01G438600 | chr2B | 80.093 | 216 | 33 | 4 | 522 | 727 | 793784451 | 793784666 | 4.540000e-33 | 152.0 |
22 | TraesCS2A01G438600 | chr5D | 84.871 | 271 | 36 | 5 | 20 | 287 | 69071618 | 69071350 | 4.320000e-68 | 268.0 |
23 | TraesCS2A01G438600 | chr5D | 83.650 | 263 | 42 | 1 | 19 | 280 | 440353411 | 440353149 | 2.030000e-61 | 246.0 |
24 | TraesCS2A01G438600 | chr4B | 85.019 | 267 | 36 | 4 | 21 | 284 | 471344684 | 471344949 | 4.320000e-68 | 268.0 |
25 | TraesCS2A01G438600 | chr4B | 96.000 | 50 | 2 | 0 | 2137 | 2186 | 447365331 | 447365282 | 6.050000e-12 | 82.4 |
26 | TraesCS2A01G438600 | chr3A | 76.426 | 526 | 91 | 13 | 284 | 778 | 681556457 | 681555934 | 1.210000e-63 | 254.0 |
27 | TraesCS2A01G438600 | chr1B | 80.415 | 337 | 48 | 13 | 323 | 644 | 566986367 | 566986034 | 9.430000e-60 | 241.0 |
28 | TraesCS2A01G438600 | chr1B | 77.835 | 388 | 59 | 18 | 279 | 649 | 598408351 | 598407974 | 5.710000e-52 | 215.0 |
29 | TraesCS2A01G438600 | chr1B | 77.461 | 386 | 63 | 17 | 279 | 649 | 598393096 | 598392720 | 2.660000e-50 | 209.0 |
30 | TraesCS2A01G438600 | chr1B | 79.574 | 235 | 38 | 5 | 504 | 728 | 606360632 | 606360398 | 2.720000e-35 | 159.0 |
31 | TraesCS2A01G438600 | chr1B | 84.286 | 140 | 20 | 2 | 504 | 642 | 395267595 | 395267457 | 4.580000e-28 | 135.0 |
32 | TraesCS2A01G438600 | chr5B | 83.019 | 265 | 42 | 3 | 21 | 284 | 535689398 | 535689136 | 1.220000e-58 | 237.0 |
33 | TraesCS2A01G438600 | chr6D | 76.180 | 466 | 85 | 15 | 285 | 727 | 379847970 | 379847508 | 3.410000e-54 | 222.0 |
34 | TraesCS2A01G438600 | chr6D | 79.167 | 336 | 56 | 5 | 285 | 608 | 285656135 | 285656468 | 1.230000e-53 | 220.0 |
35 | TraesCS2A01G438600 | chr6D | 80.935 | 278 | 44 | 9 | 12 | 284 | 316827914 | 316827641 | 7.390000e-51 | 211.0 |
36 | TraesCS2A01G438600 | chr3D | 78.964 | 309 | 52 | 7 | 285 | 581 | 28269540 | 28269847 | 5.750000e-47 | 198.0 |
37 | TraesCS2A01G438600 | chr3B | 81.140 | 228 | 39 | 2 | 285 | 510 | 488134348 | 488134573 | 2.080000e-41 | 180.0 |
38 | TraesCS2A01G438600 | chr3B | 81.481 | 216 | 35 | 3 | 285 | 498 | 47265465 | 47265677 | 3.490000e-39 | 172.0 |
39 | TraesCS2A01G438600 | chr3B | 83.688 | 141 | 23 | 0 | 504 | 644 | 8012559 | 8012699 | 1.650000e-27 | 134.0 |
40 | TraesCS2A01G438600 | chr4A | 85.816 | 141 | 20 | 0 | 504 | 644 | 87241024 | 87240884 | 1.630000e-32 | 150.0 |
41 | TraesCS2A01G438600 | chr4A | 94.000 | 50 | 3 | 0 | 2137 | 2186 | 103333030 | 103333079 | 2.810000e-10 | 76.8 |
42 | TraesCS2A01G438600 | chr6A | 79.646 | 226 | 29 | 11 | 422 | 633 | 21555804 | 21555582 | 2.110000e-31 | 147.0 |
43 | TraesCS2A01G438600 | chr4D | 94.000 | 50 | 3 | 0 | 2137 | 2186 | 361978997 | 361978948 | 2.810000e-10 | 76.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G438600 | chr2A | 689759951 | 689762586 | 2635 | True | 4868.0 | 4868 | 100.000000 | 1 | 2636 | 1 | chr2A.!!$R1 | 2635 |
1 | TraesCS2A01G438600 | chr2A | 689804237 | 689805429 | 1192 | True | 1452.0 | 1452 | 89.043000 | 846 | 2029 | 1 | chr2A.!!$R2 | 1183 |
2 | TraesCS2A01G438600 | chr2A | 689768893 | 689770064 | 1171 | True | 727.6 | 1371 | 95.050500 | 920 | 2064 | 2 | chr2A.!!$R3 | 1144 |
3 | TraesCS2A01G438600 | chr2D | 546806446 | 546807877 | 1431 | False | 1881.0 | 1881 | 90.437000 | 1061 | 2505 | 1 | chr2D.!!$F5 | 1444 |
4 | TraesCS2A01G438600 | chr2D | 546682364 | 546683539 | 1175 | False | 1303.0 | 1303 | 87.164000 | 1057 | 2208 | 1 | chr2D.!!$F2 | 1151 |
5 | TraesCS2A01G438600 | chr2D | 546637592 | 546638517 | 925 | False | 1131.0 | 1131 | 88.622000 | 1061 | 2013 | 1 | chr2D.!!$F1 | 952 |
6 | TraesCS2A01G438600 | chr2D | 546740137 | 546740919 | 782 | False | 819.0 | 819 | 85.787000 | 1 | 775 | 1 | chr2D.!!$F3 | 774 |
7 | TraesCS2A01G438600 | chr2D | 546733207 | 546734743 | 1536 | False | 637.5 | 1160 | 84.848000 | 936 | 2199 | 2 | chr2D.!!$F6 | 1263 |
8 | TraesCS2A01G438600 | chr5A | 377361908 | 377362689 | 781 | False | 1053.0 | 1053 | 91.060000 | 1085 | 1862 | 1 | chr5A.!!$F1 | 777 |
9 | TraesCS2A01G438600 | chr2B | 653415671 | 653416299 | 628 | False | 636.0 | 636 | 85.056000 | 1061 | 1684 | 1 | chr2B.!!$F4 | 623 |
10 | TraesCS2A01G438600 | chr2B | 653592251 | 653593490 | 1239 | False | 463.0 | 941 | 88.922667 | 1061 | 2510 | 3 | chr2B.!!$F7 | 1449 |
11 | TraesCS2A01G438600 | chr3A | 681555934 | 681556457 | 523 | True | 254.0 | 254 | 76.426000 | 284 | 778 | 1 | chr3A.!!$R1 | 494 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
583 | 597 | 0.035317 | TTGTTCTGATGCGCTGGTCT | 59.965 | 50.0 | 9.73 | 0.0 | 0.0 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2547 | 3023 | 0.037605 | GAGGAACGGACGACACCAAT | 60.038 | 55.0 | 0.0 | 0.0 | 0.0 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 3.255149 | ACCCTGAACGTCTATATAAGCCG | 59.745 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
34 | 35 | 5.388944 | CCTGAACGTCTATATAAGCCGTAC | 58.611 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
36 | 37 | 4.083855 | TGAACGTCTATATAAGCCGTACGG | 60.084 | 45.833 | 30.06 | 30.06 | 38.57 | 4.02 |
57 | 58 | 4.338682 | CGGTTTAGTCTGTAGAGGCACTAT | 59.661 | 45.833 | 0.00 | 0.00 | 41.55 | 2.12 |
76 | 77 | 7.009568 | CACTATTGCAAGGTTTAGAGCTTAG | 57.990 | 40.000 | 4.94 | 0.00 | 41.44 | 2.18 |
86 | 87 | 5.780793 | AGGTTTAGAGCTTAGAACTCCTTCA | 59.219 | 40.000 | 0.00 | 0.00 | 34.56 | 3.02 |
95 | 96 | 6.322712 | AGCTTAGAACTCCTTCATACGATCTT | 59.677 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
96 | 97 | 6.419413 | GCTTAGAACTCCTTCATACGATCTTG | 59.581 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
97 | 98 | 4.688021 | AGAACTCCTTCATACGATCTTGC | 58.312 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
118 | 119 | 8.098912 | TCTTGCGGTAGATCATACTATACACTA | 58.901 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
152 | 153 | 8.380867 | TCACAATCAATATATCAGAAGCAGGAT | 58.619 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
157 | 158 | 8.655935 | TCAATATATCAGAAGCAGGATGTAGA | 57.344 | 34.615 | 0.00 | 0.00 | 39.31 | 2.59 |
158 | 159 | 9.264653 | TCAATATATCAGAAGCAGGATGTAGAT | 57.735 | 33.333 | 0.00 | 0.00 | 39.31 | 1.98 |
182 | 183 | 2.166907 | ATCTCATCAAGAGGGTCCGT | 57.833 | 50.000 | 0.00 | 0.00 | 44.81 | 4.69 |
191 | 192 | 1.611556 | GAGGGTCCGTACCTGGGTT | 60.612 | 63.158 | 0.00 | 0.00 | 45.95 | 4.11 |
197 | 198 | 3.392285 | GGGTCCGTACCTGGGTTAATATT | 59.608 | 47.826 | 0.00 | 0.00 | 45.95 | 1.28 |
198 | 199 | 4.383173 | GGTCCGTACCTGGGTTAATATTG | 58.617 | 47.826 | 0.00 | 0.00 | 43.08 | 1.90 |
204 | 205 | 3.881220 | ACCTGGGTTAATATTGTGTCCG | 58.119 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
207 | 208 | 4.703093 | CCTGGGTTAATATTGTGTCCGTTT | 59.297 | 41.667 | 0.00 | 0.00 | 0.00 | 3.60 |
211 | 212 | 6.088173 | GGGTTAATATTGTGTCCGTTTTGTC | 58.912 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
214 | 215 | 7.308109 | GGTTAATATTGTGTCCGTTTTGTCTCA | 60.308 | 37.037 | 0.00 | 0.00 | 0.00 | 3.27 |
221 | 222 | 4.271533 | GTGTCCGTTTTGTCTCATGTTACA | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
222 | 223 | 5.049680 | GTGTCCGTTTTGTCTCATGTTACAT | 60.050 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
223 | 224 | 5.178623 | TGTCCGTTTTGTCTCATGTTACATC | 59.821 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
224 | 225 | 5.408604 | GTCCGTTTTGTCTCATGTTACATCT | 59.591 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
225 | 226 | 6.588756 | GTCCGTTTTGTCTCATGTTACATCTA | 59.411 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
226 | 227 | 6.811665 | TCCGTTTTGTCTCATGTTACATCTAG | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
227 | 228 | 6.455646 | CCGTTTTGTCTCATGTTACATCTAGC | 60.456 | 42.308 | 0.00 | 0.00 | 0.00 | 3.42 |
241 | 243 | 4.892433 | ACATCTAGCTCATATCACCAAGC | 58.108 | 43.478 | 0.00 | 0.00 | 34.95 | 4.01 |
266 | 268 | 1.233369 | CCCCCTACCCGAGATCTGT | 59.767 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
311 | 313 | 1.824852 | GGTGGGAGGGCTATGTTTTTG | 59.175 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
315 | 317 | 3.245948 | TGGGAGGGCTATGTTTTTGGATT | 60.246 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
317 | 319 | 4.225042 | GGGAGGGCTATGTTTTTGGATTTT | 59.775 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
370 | 372 | 1.176619 | TCAGGAAGGCGAGACAACGA | 61.177 | 55.000 | 0.00 | 0.00 | 35.09 | 3.85 |
371 | 373 | 0.108615 | CAGGAAGGCGAGACAACGAT | 60.109 | 55.000 | 0.00 | 0.00 | 35.09 | 3.73 |
400 | 402 | 6.445139 | TCCTTGAAGATGGAATAAGGTTCTCT | 59.555 | 38.462 | 0.00 | 0.00 | 39.11 | 3.10 |
414 | 416 | 2.093106 | GTTCTCTCCGTCTAGCCTTCA | 58.907 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
419 | 421 | 2.431057 | TCTCCGTCTAGCCTTCATTTCC | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
443 | 447 | 2.104132 | CGTCGCATCATCGGTGGA | 59.896 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
445 | 449 | 1.153647 | GTCGCATCATCGGTGGACA | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
470 | 474 | 1.548719 | CAGGTGTGTCTCCGGTGAATA | 59.451 | 52.381 | 7.99 | 0.00 | 0.00 | 1.75 |
481 | 485 | 4.019681 | TCTCCGGTGAATATGTCTTTGGTT | 60.020 | 41.667 | 3.14 | 0.00 | 0.00 | 3.67 |
520 | 534 | 3.239587 | TGTCGTTTGTGTGTCTTCAGA | 57.760 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
553 | 567 | 9.249457 | CATTTTGATCTACGCTACTCTTCATAA | 57.751 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
558 | 572 | 3.166489 | ACGCTACTCTTCATAAGTGGC | 57.834 | 47.619 | 1.98 | 1.98 | 44.89 | 5.01 |
560 | 574 | 3.166489 | GCTACTCTTCATAAGTGGCGT | 57.834 | 47.619 | 0.00 | 0.00 | 40.65 | 5.68 |
566 | 580 | 4.024048 | ACTCTTCATAAGTGGCGTTTGTTG | 60.024 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
567 | 581 | 3.880490 | TCTTCATAAGTGGCGTTTGTTGT | 59.120 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
568 | 582 | 4.336993 | TCTTCATAAGTGGCGTTTGTTGTT | 59.663 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
569 | 583 | 4.217754 | TCATAAGTGGCGTTTGTTGTTC | 57.782 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
570 | 584 | 3.880490 | TCATAAGTGGCGTTTGTTGTTCT | 59.120 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
571 | 585 | 2.559998 | AAGTGGCGTTTGTTGTTCTG | 57.440 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
572 | 586 | 1.745232 | AGTGGCGTTTGTTGTTCTGA | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
573 | 587 | 2.297701 | AGTGGCGTTTGTTGTTCTGAT | 58.702 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
574 | 588 | 2.033299 | AGTGGCGTTTGTTGTTCTGATG | 59.967 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
575 | 589 | 1.268999 | TGGCGTTTGTTGTTCTGATGC | 60.269 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
576 | 590 | 1.044725 | GCGTTTGTTGTTCTGATGCG | 58.955 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
577 | 591 | 1.044725 | CGTTTGTTGTTCTGATGCGC | 58.955 | 50.000 | 0.00 | 0.00 | 0.00 | 6.09 |
578 | 592 | 1.334059 | CGTTTGTTGTTCTGATGCGCT | 60.334 | 47.619 | 9.73 | 0.00 | 0.00 | 5.92 |
579 | 593 | 2.046313 | GTTTGTTGTTCTGATGCGCTG | 58.954 | 47.619 | 9.73 | 0.00 | 0.00 | 5.18 |
580 | 594 | 0.592637 | TTGTTGTTCTGATGCGCTGG | 59.407 | 50.000 | 9.73 | 0.00 | 0.00 | 4.85 |
581 | 595 | 0.534877 | TGTTGTTCTGATGCGCTGGT | 60.535 | 50.000 | 9.73 | 0.00 | 0.00 | 4.00 |
582 | 596 | 0.166814 | GTTGTTCTGATGCGCTGGTC | 59.833 | 55.000 | 9.73 | 4.94 | 0.00 | 4.02 |
583 | 597 | 0.035317 | TTGTTCTGATGCGCTGGTCT | 59.965 | 50.000 | 9.73 | 0.00 | 0.00 | 3.85 |
584 | 598 | 0.035317 | TGTTCTGATGCGCTGGTCTT | 59.965 | 50.000 | 9.73 | 0.00 | 0.00 | 3.01 |
585 | 599 | 1.275010 | TGTTCTGATGCGCTGGTCTTA | 59.725 | 47.619 | 9.73 | 0.00 | 0.00 | 2.10 |
586 | 600 | 2.093500 | TGTTCTGATGCGCTGGTCTTAT | 60.093 | 45.455 | 9.73 | 0.00 | 0.00 | 1.73 |
587 | 601 | 2.229675 | TCTGATGCGCTGGTCTTATG | 57.770 | 50.000 | 9.73 | 0.00 | 0.00 | 1.90 |
588 | 602 | 1.202568 | TCTGATGCGCTGGTCTTATGG | 60.203 | 52.381 | 9.73 | 0.00 | 0.00 | 2.74 |
589 | 603 | 0.179048 | TGATGCGCTGGTCTTATGGG | 60.179 | 55.000 | 9.73 | 0.00 | 0.00 | 4.00 |
590 | 604 | 0.886490 | GATGCGCTGGTCTTATGGGG | 60.886 | 60.000 | 9.73 | 0.00 | 0.00 | 4.96 |
591 | 605 | 2.902343 | GCGCTGGTCTTATGGGGC | 60.902 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
592 | 606 | 2.203209 | CGCTGGTCTTATGGGGCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
593 | 607 | 2.746375 | CGCTGGTCTTATGGGGCCT | 61.746 | 63.158 | 0.84 | 0.00 | 0.00 | 5.19 |
594 | 608 | 1.615262 | GCTGGTCTTATGGGGCCTT | 59.385 | 57.895 | 0.84 | 0.00 | 0.00 | 4.35 |
595 | 609 | 0.843984 | GCTGGTCTTATGGGGCCTTA | 59.156 | 55.000 | 0.84 | 0.00 | 0.00 | 2.69 |
596 | 610 | 1.202818 | GCTGGTCTTATGGGGCCTTAG | 60.203 | 57.143 | 0.84 | 0.00 | 0.00 | 2.18 |
597 | 611 | 0.843984 | TGGTCTTATGGGGCCTTAGC | 59.156 | 55.000 | 0.84 | 0.00 | 38.76 | 3.09 |
598 | 612 | 0.843984 | GGTCTTATGGGGCCTTAGCA | 59.156 | 55.000 | 0.84 | 0.00 | 42.56 | 3.49 |
599 | 613 | 1.425448 | GGTCTTATGGGGCCTTAGCAT | 59.575 | 52.381 | 0.84 | 0.14 | 42.56 | 3.79 |
600 | 614 | 2.508526 | GTCTTATGGGGCCTTAGCATG | 58.491 | 52.381 | 0.84 | 0.00 | 42.56 | 4.06 |
601 | 615 | 2.106511 | GTCTTATGGGGCCTTAGCATGA | 59.893 | 50.000 | 0.84 | 0.00 | 42.56 | 3.07 |
602 | 616 | 2.106511 | TCTTATGGGGCCTTAGCATGAC | 59.893 | 50.000 | 0.84 | 0.00 | 42.56 | 3.06 |
603 | 617 | 0.396435 | TATGGGGCCTTAGCATGACG | 59.604 | 55.000 | 0.84 | 0.00 | 42.56 | 4.35 |
604 | 618 | 1.344953 | ATGGGGCCTTAGCATGACGA | 61.345 | 55.000 | 0.84 | 0.00 | 42.56 | 4.20 |
605 | 619 | 1.523938 | GGGGCCTTAGCATGACGAC | 60.524 | 63.158 | 0.84 | 0.00 | 42.56 | 4.34 |
606 | 620 | 1.522569 | GGGCCTTAGCATGACGACT | 59.477 | 57.895 | 0.84 | 0.00 | 42.56 | 4.18 |
607 | 621 | 0.107654 | GGGCCTTAGCATGACGACTT | 60.108 | 55.000 | 0.84 | 0.00 | 42.56 | 3.01 |
608 | 622 | 1.679032 | GGGCCTTAGCATGACGACTTT | 60.679 | 52.381 | 0.84 | 0.00 | 42.56 | 2.66 |
609 | 623 | 1.666189 | GGCCTTAGCATGACGACTTTC | 59.334 | 52.381 | 0.00 | 0.00 | 42.56 | 2.62 |
610 | 624 | 2.622436 | GCCTTAGCATGACGACTTTCT | 58.378 | 47.619 | 0.00 | 0.00 | 39.53 | 2.52 |
611 | 625 | 2.349886 | GCCTTAGCATGACGACTTTCTG | 59.650 | 50.000 | 0.00 | 0.00 | 39.53 | 3.02 |
612 | 626 | 3.849911 | CCTTAGCATGACGACTTTCTGA | 58.150 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
613 | 627 | 4.437239 | CCTTAGCATGACGACTTTCTGAT | 58.563 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
614 | 628 | 4.872691 | CCTTAGCATGACGACTTTCTGATT | 59.127 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
615 | 629 | 5.220548 | CCTTAGCATGACGACTTTCTGATTG | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.67 |
616 | 630 | 3.668447 | AGCATGACGACTTTCTGATTGT | 58.332 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
617 | 631 | 3.681897 | AGCATGACGACTTTCTGATTGTC | 59.318 | 43.478 | 0.00 | 1.90 | 0.00 | 3.18 |
618 | 632 | 3.681897 | GCATGACGACTTTCTGATTGTCT | 59.318 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
619 | 633 | 4.864806 | GCATGACGACTTTCTGATTGTCTA | 59.135 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
620 | 634 | 5.220303 | GCATGACGACTTTCTGATTGTCTAC | 60.220 | 44.000 | 0.00 | 4.27 | 0.00 | 2.59 |
621 | 635 | 5.707242 | TGACGACTTTCTGATTGTCTACT | 57.293 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
622 | 636 | 6.812879 | TGACGACTTTCTGATTGTCTACTA | 57.187 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
623 | 637 | 6.609533 | TGACGACTTTCTGATTGTCTACTAC | 58.390 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
624 | 638 | 6.206048 | TGACGACTTTCTGATTGTCTACTACA | 59.794 | 38.462 | 0.00 | 0.00 | 35.88 | 2.74 |
637 | 651 | 7.766219 | TTGTCTACTACAACAAGTTCTGTTC | 57.234 | 36.000 | 0.00 | 0.00 | 45.50 | 3.18 |
638 | 652 | 5.975344 | TGTCTACTACAACAAGTTCTGTTCG | 59.025 | 40.000 | 0.00 | 0.00 | 45.50 | 3.95 |
639 | 653 | 5.401674 | GTCTACTACAACAAGTTCTGTTCGG | 59.598 | 44.000 | 0.00 | 0.00 | 45.50 | 4.30 |
640 | 654 | 2.870411 | ACTACAACAAGTTCTGTTCGGC | 59.130 | 45.455 | 0.00 | 0.00 | 45.50 | 5.54 |
641 | 655 | 2.038387 | ACAACAAGTTCTGTTCGGCT | 57.962 | 45.000 | 0.00 | 0.00 | 45.50 | 5.52 |
642 | 656 | 1.940613 | ACAACAAGTTCTGTTCGGCTC | 59.059 | 47.619 | 0.00 | 0.00 | 45.50 | 4.70 |
643 | 657 | 1.264288 | CAACAAGTTCTGTTCGGCTCC | 59.736 | 52.381 | 0.00 | 0.00 | 45.50 | 4.70 |
644 | 658 | 0.250338 | ACAAGTTCTGTTCGGCTCCC | 60.250 | 55.000 | 0.00 | 0.00 | 32.99 | 4.30 |
655 | 669 | 4.286320 | GGCTCCCGCGACGATGAT | 62.286 | 66.667 | 8.23 | 0.00 | 36.88 | 2.45 |
656 | 670 | 3.032609 | GCTCCCGCGACGATGATG | 61.033 | 66.667 | 8.23 | 0.00 | 0.00 | 3.07 |
657 | 671 | 2.355126 | CTCCCGCGACGATGATGG | 60.355 | 66.667 | 8.23 | 0.00 | 0.00 | 3.51 |
658 | 672 | 4.585526 | TCCCGCGACGATGATGGC | 62.586 | 66.667 | 8.23 | 0.00 | 0.00 | 4.40 |
665 | 679 | 2.571757 | ACGATGATGGCGTCACGT | 59.428 | 55.556 | 22.59 | 22.59 | 40.28 | 4.49 |
666 | 680 | 1.516386 | ACGATGATGGCGTCACGTC | 60.516 | 57.895 | 22.59 | 13.47 | 38.97 | 4.34 |
667 | 681 | 1.226688 | CGATGATGGCGTCACGTCT | 60.227 | 57.895 | 12.39 | 0.00 | 40.28 | 4.18 |
668 | 682 | 0.802222 | CGATGATGGCGTCACGTCTT | 60.802 | 55.000 | 12.39 | 0.00 | 40.28 | 3.01 |
669 | 683 | 0.924090 | GATGATGGCGTCACGTCTTC | 59.076 | 55.000 | 12.39 | 10.60 | 40.28 | 2.87 |
670 | 684 | 0.246360 | ATGATGGCGTCACGTCTTCA | 59.754 | 50.000 | 21.06 | 21.06 | 46.18 | 3.02 |
671 | 685 | 0.246360 | TGATGGCGTCACGTCTTCAT | 59.754 | 50.000 | 15.75 | 6.72 | 39.85 | 2.57 |
672 | 686 | 0.924090 | GATGGCGTCACGTCTTCATC | 59.076 | 55.000 | 12.47 | 10.12 | 36.05 | 2.92 |
673 | 687 | 0.532573 | ATGGCGTCACGTCTTCATCT | 59.467 | 50.000 | 2.20 | 0.00 | 30.55 | 2.90 |
674 | 688 | 0.317160 | TGGCGTCACGTCTTCATCTT | 59.683 | 50.000 | 2.20 | 0.00 | 30.55 | 2.40 |
675 | 689 | 0.716108 | GGCGTCACGTCTTCATCTTG | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
676 | 690 | 0.093705 | GCGTCACGTCTTCATCTTGC | 59.906 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
677 | 691 | 1.702886 | CGTCACGTCTTCATCTTGCT | 58.297 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
678 | 692 | 2.061773 | CGTCACGTCTTCATCTTGCTT | 58.938 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
679 | 693 | 2.091277 | CGTCACGTCTTCATCTTGCTTC | 59.909 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
680 | 694 | 3.059884 | GTCACGTCTTCATCTTGCTTCA | 58.940 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
681 | 695 | 3.122613 | GTCACGTCTTCATCTTGCTTCAG | 59.877 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
682 | 696 | 3.062763 | CACGTCTTCATCTTGCTTCAGT | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
683 | 697 | 3.062763 | ACGTCTTCATCTTGCTTCAGTG | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
684 | 698 | 3.062763 | CGTCTTCATCTTGCTTCAGTGT | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
685 | 699 | 3.496130 | CGTCTTCATCTTGCTTCAGTGTT | 59.504 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
686 | 700 | 4.024556 | CGTCTTCATCTTGCTTCAGTGTTT | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
687 | 701 | 5.177511 | CGTCTTCATCTTGCTTCAGTGTTTA | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
688 | 702 | 6.128445 | CGTCTTCATCTTGCTTCAGTGTTTAT | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
689 | 703 | 7.063426 | CGTCTTCATCTTGCTTCAGTGTTTATA | 59.937 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
690 | 704 | 8.386606 | GTCTTCATCTTGCTTCAGTGTTTATAG | 58.613 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
691 | 705 | 8.097038 | TCTTCATCTTGCTTCAGTGTTTATAGT | 58.903 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
692 | 706 | 7.834068 | TCATCTTGCTTCAGTGTTTATAGTC | 57.166 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
693 | 707 | 6.531594 | TCATCTTGCTTCAGTGTTTATAGTCG | 59.468 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
694 | 708 | 5.779922 | TCTTGCTTCAGTGTTTATAGTCGT | 58.220 | 37.500 | 0.00 | 0.00 | 0.00 | 4.34 |
695 | 709 | 5.862323 | TCTTGCTTCAGTGTTTATAGTCGTC | 59.138 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
696 | 710 | 4.163552 | TGCTTCAGTGTTTATAGTCGTCG | 58.836 | 43.478 | 0.00 | 0.00 | 0.00 | 5.12 |
697 | 711 | 3.546670 | GCTTCAGTGTTTATAGTCGTCGG | 59.453 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
698 | 712 | 4.730657 | CTTCAGTGTTTATAGTCGTCGGT | 58.269 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
699 | 713 | 5.674569 | GCTTCAGTGTTTATAGTCGTCGGTA | 60.675 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
700 | 714 | 5.475273 | TCAGTGTTTATAGTCGTCGGTAG | 57.525 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
701 | 715 | 5.178061 | TCAGTGTTTATAGTCGTCGGTAGA | 58.822 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
702 | 716 | 5.819379 | TCAGTGTTTATAGTCGTCGGTAGAT | 59.181 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
703 | 717 | 6.986231 | TCAGTGTTTATAGTCGTCGGTAGATA | 59.014 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
704 | 718 | 7.170489 | TCAGTGTTTATAGTCGTCGGTAGATAG | 59.830 | 40.741 | 0.00 | 0.00 | 0.00 | 2.08 |
705 | 719 | 6.989169 | AGTGTTTATAGTCGTCGGTAGATAGT | 59.011 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
706 | 720 | 7.170658 | AGTGTTTATAGTCGTCGGTAGATAGTC | 59.829 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
707 | 721 | 7.170658 | GTGTTTATAGTCGTCGGTAGATAGTCT | 59.829 | 40.741 | 0.00 | 0.00 | 0.00 | 3.24 |
708 | 722 | 8.360390 | TGTTTATAGTCGTCGGTAGATAGTCTA | 58.640 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
709 | 723 | 9.364989 | GTTTATAGTCGTCGGTAGATAGTCTAT | 57.635 | 37.037 | 0.00 | 0.00 | 30.76 | 1.98 |
710 | 724 | 8.923609 | TTATAGTCGTCGGTAGATAGTCTATG | 57.076 | 38.462 | 0.00 | 0.00 | 30.76 | 2.23 |
711 | 725 | 4.567971 | AGTCGTCGGTAGATAGTCTATGG | 58.432 | 47.826 | 0.00 | 0.00 | 30.76 | 2.74 |
712 | 726 | 4.282957 | AGTCGTCGGTAGATAGTCTATGGA | 59.717 | 45.833 | 0.00 | 0.00 | 30.76 | 3.41 |
713 | 727 | 5.046448 | AGTCGTCGGTAGATAGTCTATGGAT | 60.046 | 44.000 | 0.00 | 0.00 | 30.76 | 3.41 |
714 | 728 | 5.642919 | GTCGTCGGTAGATAGTCTATGGATT | 59.357 | 44.000 | 0.00 | 0.00 | 30.76 | 3.01 |
715 | 729 | 6.149142 | GTCGTCGGTAGATAGTCTATGGATTT | 59.851 | 42.308 | 0.00 | 0.00 | 30.76 | 2.17 |
716 | 730 | 6.148976 | TCGTCGGTAGATAGTCTATGGATTTG | 59.851 | 42.308 | 0.00 | 0.00 | 30.76 | 2.32 |
717 | 731 | 6.072618 | CGTCGGTAGATAGTCTATGGATTTGT | 60.073 | 42.308 | 0.00 | 0.00 | 30.76 | 2.83 |
718 | 732 | 7.085116 | GTCGGTAGATAGTCTATGGATTTGTG | 58.915 | 42.308 | 0.00 | 0.00 | 30.76 | 3.33 |
719 | 733 | 6.776116 | TCGGTAGATAGTCTATGGATTTGTGT | 59.224 | 38.462 | 0.00 | 0.00 | 30.76 | 3.72 |
720 | 734 | 7.940688 | TCGGTAGATAGTCTATGGATTTGTGTA | 59.059 | 37.037 | 0.00 | 0.00 | 30.76 | 2.90 |
721 | 735 | 8.573885 | CGGTAGATAGTCTATGGATTTGTGTAA | 58.426 | 37.037 | 0.00 | 0.00 | 30.76 | 2.41 |
746 | 760 | 5.821516 | TTTTGGTGTTCGTTGTATTGTCT | 57.178 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
747 | 761 | 5.821516 | TTTGGTGTTCGTTGTATTGTCTT | 57.178 | 34.783 | 0.00 | 0.00 | 0.00 | 3.01 |
748 | 762 | 4.804608 | TGGTGTTCGTTGTATTGTCTTG | 57.195 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
749 | 763 | 4.443621 | TGGTGTTCGTTGTATTGTCTTGA | 58.556 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
750 | 764 | 5.060506 | TGGTGTTCGTTGTATTGTCTTGAT | 58.939 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
751 | 765 | 5.529430 | TGGTGTTCGTTGTATTGTCTTGATT | 59.471 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
752 | 766 | 6.038825 | TGGTGTTCGTTGTATTGTCTTGATTT | 59.961 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
753 | 767 | 7.226918 | TGGTGTTCGTTGTATTGTCTTGATTTA | 59.773 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
754 | 768 | 8.071368 | GGTGTTCGTTGTATTGTCTTGATTTAA | 58.929 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
755 | 769 | 9.103048 | GTGTTCGTTGTATTGTCTTGATTTAAG | 57.897 | 33.333 | 0.00 | 0.00 | 37.76 | 1.85 |
756 | 770 | 9.047371 | TGTTCGTTGTATTGTCTTGATTTAAGA | 57.953 | 29.630 | 0.00 | 0.00 | 43.01 | 2.10 |
768 | 782 | 6.726230 | TCTTGATTTAAGACGAGTAGATCGG | 58.274 | 40.000 | 2.07 | 0.00 | 44.34 | 4.18 |
769 | 783 | 6.541278 | TCTTGATTTAAGACGAGTAGATCGGA | 59.459 | 38.462 | 2.07 | 0.00 | 44.34 | 4.55 |
770 | 784 | 7.066645 | TCTTGATTTAAGACGAGTAGATCGGAA | 59.933 | 37.037 | 2.07 | 0.00 | 44.34 | 4.30 |
798 | 812 | 4.349663 | TTTAGAAAAATGTGATCGGGCG | 57.650 | 40.909 | 0.00 | 0.00 | 0.00 | 6.13 |
799 | 813 | 2.107950 | AGAAAAATGTGATCGGGCGA | 57.892 | 45.000 | 0.00 | 0.00 | 0.00 | 5.54 |
800 | 814 | 2.643551 | AGAAAAATGTGATCGGGCGAT | 58.356 | 42.857 | 0.00 | 0.00 | 37.59 | 4.58 |
801 | 815 | 8.100032 | TTTTTAGAAAAATGTGATCGGGCGATC | 61.100 | 37.037 | 0.00 | 0.00 | 40.53 | 3.69 |
807 | 821 | 2.125912 | GATCGGGCGATCGGATGG | 60.126 | 66.667 | 18.30 | 0.00 | 41.09 | 3.51 |
808 | 822 | 4.379243 | ATCGGGCGATCGGATGGC | 62.379 | 66.667 | 18.30 | 15.61 | 34.66 | 4.40 |
810 | 824 | 4.687215 | CGGGCGATCGGATGGCAT | 62.687 | 66.667 | 23.42 | 0.00 | 35.53 | 4.40 |
811 | 825 | 2.662596 | GGGCGATCGGATGGCATA | 59.337 | 61.111 | 23.42 | 0.00 | 35.53 | 3.14 |
812 | 826 | 1.448540 | GGGCGATCGGATGGCATAG | 60.449 | 63.158 | 23.42 | 0.00 | 35.53 | 2.23 |
813 | 827 | 1.293498 | GGCGATCGGATGGCATAGT | 59.707 | 57.895 | 23.42 | 0.00 | 35.53 | 2.12 |
814 | 828 | 1.016130 | GGCGATCGGATGGCATAGTG | 61.016 | 60.000 | 23.42 | 0.00 | 35.53 | 2.74 |
815 | 829 | 0.038251 | GCGATCGGATGGCATAGTGA | 60.038 | 55.000 | 18.30 | 0.00 | 33.87 | 3.41 |
816 | 830 | 1.988063 | CGATCGGATGGCATAGTGAG | 58.012 | 55.000 | 7.38 | 0.00 | 0.00 | 3.51 |
817 | 831 | 1.719600 | GATCGGATGGCATAGTGAGC | 58.280 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
818 | 832 | 0.037882 | ATCGGATGGCATAGTGAGCG | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
819 | 833 | 2.313172 | CGGATGGCATAGTGAGCGC | 61.313 | 63.158 | 0.00 | 0.00 | 0.00 | 5.92 |
820 | 834 | 2.313172 | GGATGGCATAGTGAGCGCG | 61.313 | 63.158 | 0.00 | 0.00 | 0.00 | 6.86 |
821 | 835 | 2.280389 | ATGGCATAGTGAGCGCGG | 60.280 | 61.111 | 8.83 | 0.00 | 0.00 | 6.46 |
822 | 836 | 2.978452 | GATGGCATAGTGAGCGCGGT | 62.978 | 60.000 | 12.23 | 12.23 | 0.00 | 5.68 |
823 | 837 | 2.962253 | GGCATAGTGAGCGCGGTC | 60.962 | 66.667 | 30.17 | 30.17 | 0.00 | 4.79 |
824 | 838 | 3.323136 | GCATAGTGAGCGCGGTCG | 61.323 | 66.667 | 30.51 | 18.15 | 39.07 | 4.79 |
825 | 839 | 2.407616 | CATAGTGAGCGCGGTCGA | 59.592 | 61.111 | 30.51 | 19.76 | 38.10 | 4.20 |
826 | 840 | 1.939785 | CATAGTGAGCGCGGTCGAC | 60.940 | 63.158 | 30.51 | 26.68 | 38.10 | 4.20 |
848 | 862 | 2.350498 | GCAAAGCGATAAAGTTAGCCGA | 59.650 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
856 | 870 | 4.380974 | CGATAAAGTTAGCCGACCGAATAC | 59.619 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
862 | 876 | 3.117372 | CCGACCGAATACGAGCCT | 58.883 | 61.111 | 0.00 | 0.00 | 42.66 | 4.58 |
870 | 884 | 2.351726 | CCGAATACGAGCCTTTTCCAAG | 59.648 | 50.000 | 0.00 | 0.00 | 42.66 | 3.61 |
887 | 901 | 1.834188 | AAGCCGAAAACGGATTGGAT | 58.166 | 45.000 | 11.15 | 0.00 | 36.21 | 3.41 |
975 | 1009 | 3.957474 | GCAGTACGCAAGAGAAAGC | 57.043 | 52.632 | 5.07 | 0.00 | 41.79 | 3.51 |
1011 | 1061 | 2.397751 | GCTAGACATGGCGTGCATT | 58.602 | 52.632 | 12.82 | 0.00 | 0.00 | 3.56 |
1133 | 1210 | 4.410033 | GGAACCTCCTCCCCGGGA | 62.410 | 72.222 | 26.32 | 5.87 | 32.53 | 5.14 |
1746 | 1844 | 2.165641 | TGGCTTCATCGACGTGATAAGT | 59.834 | 45.455 | 0.00 | 0.00 | 34.83 | 2.24 |
1776 | 1898 | 1.337384 | TGGATCTGCATAGCCGGTGT | 61.337 | 55.000 | 1.90 | 0.00 | 0.00 | 4.16 |
1794 | 1925 | 1.402968 | TGTAGTCGACCGGATTGTAGC | 59.597 | 52.381 | 9.46 | 0.00 | 0.00 | 3.58 |
1835 | 1967 | 7.042658 | CCTTTGTTTGTAGTCTTGTAGAGTCAC | 60.043 | 40.741 | 0.00 | 0.00 | 0.00 | 3.67 |
1912 | 2070 | 1.350351 | ACTGTTGAAGCAGCTCTGGAT | 59.650 | 47.619 | 0.00 | 0.00 | 39.96 | 3.41 |
2195 | 2652 | 1.170919 | GCCCGTCCTGTATCGCTCTA | 61.171 | 60.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2210 | 2667 | 0.392336 | CTCTAGAGCTGGACATGGGC | 59.608 | 60.000 | 6.86 | 0.00 | 0.00 | 5.36 |
2214 | 2671 | 2.687200 | AGCTGGACATGGGCGGTA | 60.687 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2255 | 2712 | 1.003580 | TGGAGGTGAAGAAGGATGCAC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
2280 | 2739 | 4.142359 | GGATGTCTGTCTGTGAACTCGTAT | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
2287 | 2746 | 2.014857 | CTGTGAACTCGTATCTCCCGA | 58.985 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
2397 | 2864 | 3.710722 | CTCTGCCTCGCCCCAAGT | 61.711 | 66.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2398 | 2865 | 3.249189 | TCTGCCTCGCCCCAAGTT | 61.249 | 61.111 | 0.00 | 0.00 | 0.00 | 2.66 |
2447 | 2914 | 2.697425 | CGCTTGATCGTCGCCTTG | 59.303 | 61.111 | 0.00 | 0.00 | 0.00 | 3.61 |
2469 | 2945 | 1.066587 | GTCATCTTCTCCGCCTCCG | 59.933 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
2470 | 2946 | 1.379977 | TCATCTTCTCCGCCTCCGT | 60.380 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
2471 | 2947 | 1.227089 | CATCTTCTCCGCCTCCGTG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
2472 | 2948 | 3.082579 | ATCTTCTCCGCCTCCGTGC | 62.083 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
2505 | 2981 | 1.005394 | TTCGACAAGCTCCGGTTCC | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 3.62 |
2510 | 2986 | 1.675641 | CAAGCTCCGGTTCCCCTTG | 60.676 | 63.158 | 0.00 | 4.77 | 0.00 | 3.61 |
2511 | 2987 | 2.154074 | AAGCTCCGGTTCCCCTTGT | 61.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
2512 | 2988 | 2.046217 | GCTCCGGTTCCCCTTGTC | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2513 | 2989 | 2.264794 | CTCCGGTTCCCCTTGTCG | 59.735 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
2514 | 2990 | 2.203669 | TCCGGTTCCCCTTGTCGA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
2515 | 2991 | 2.047560 | CCGGTTCCCCTTGTCGAC | 60.048 | 66.667 | 9.11 | 9.11 | 0.00 | 4.20 |
2516 | 2992 | 2.738480 | CGGTTCCCCTTGTCGACA | 59.262 | 61.111 | 15.76 | 15.76 | 0.00 | 4.35 |
2517 | 2993 | 1.666872 | CGGTTCCCCTTGTCGACAC | 60.667 | 63.158 | 19.90 | 4.49 | 0.00 | 3.67 |
2518 | 2994 | 1.302271 | GGTTCCCCTTGTCGACACC | 60.302 | 63.158 | 19.90 | 10.67 | 0.00 | 4.16 |
2519 | 2995 | 1.302271 | GTTCCCCTTGTCGACACCC | 60.302 | 63.158 | 19.90 | 0.00 | 0.00 | 4.61 |
2520 | 2996 | 1.766864 | TTCCCCTTGTCGACACCCA | 60.767 | 57.895 | 19.90 | 2.47 | 0.00 | 4.51 |
2521 | 2997 | 2.032071 | CCCCTTGTCGACACCCAC | 59.968 | 66.667 | 19.90 | 0.00 | 0.00 | 4.61 |
2522 | 2998 | 2.357034 | CCCTTGTCGACACCCACG | 60.357 | 66.667 | 19.90 | 3.71 | 0.00 | 4.94 |
2523 | 2999 | 2.357034 | CCTTGTCGACACCCACGG | 60.357 | 66.667 | 19.90 | 9.93 | 0.00 | 4.94 |
2524 | 3000 | 2.357034 | CTTGTCGACACCCACGGG | 60.357 | 66.667 | 19.90 | 0.00 | 42.03 | 5.28 |
2525 | 3001 | 4.612412 | TTGTCGACACCCACGGGC | 62.612 | 66.667 | 19.90 | 0.00 | 39.32 | 6.13 |
2527 | 3003 | 4.736896 | GTCGACACCCACGGGCTC | 62.737 | 72.222 | 11.55 | 0.00 | 39.32 | 4.70 |
2552 | 3028 | 2.357836 | CCTCCTGCAGGCATTGGT | 59.642 | 61.111 | 28.91 | 0.00 | 34.56 | 3.67 |
2553 | 3029 | 2.050350 | CCTCCTGCAGGCATTGGTG | 61.050 | 63.158 | 28.91 | 10.69 | 34.56 | 4.17 |
2554 | 3030 | 1.303888 | CTCCTGCAGGCATTGGTGT | 60.304 | 57.895 | 28.91 | 0.00 | 34.44 | 4.16 |
2555 | 3031 | 1.303561 | TCCTGCAGGCATTGGTGTC | 60.304 | 57.895 | 28.91 | 0.00 | 34.44 | 3.67 |
2556 | 3032 | 2.693762 | CCTGCAGGCATTGGTGTCG | 61.694 | 63.158 | 22.33 | 0.00 | 34.36 | 4.35 |
2557 | 3033 | 1.968017 | CTGCAGGCATTGGTGTCGT | 60.968 | 57.895 | 5.57 | 0.00 | 34.36 | 4.34 |
2558 | 3034 | 1.915614 | CTGCAGGCATTGGTGTCGTC | 61.916 | 60.000 | 5.57 | 0.00 | 34.36 | 4.20 |
2559 | 3035 | 2.690778 | GCAGGCATTGGTGTCGTCC | 61.691 | 63.158 | 0.00 | 0.00 | 34.36 | 4.79 |
2560 | 3036 | 2.047274 | AGGCATTGGTGTCGTCCG | 60.047 | 61.111 | 0.00 | 0.00 | 34.36 | 4.79 |
2561 | 3037 | 2.358247 | GGCATTGGTGTCGTCCGT | 60.358 | 61.111 | 0.00 | 0.00 | 0.00 | 4.69 |
2562 | 3038 | 1.964373 | GGCATTGGTGTCGTCCGTT | 60.964 | 57.895 | 0.00 | 0.00 | 0.00 | 4.44 |
2563 | 3039 | 1.495951 | GCATTGGTGTCGTCCGTTC | 59.504 | 57.895 | 0.00 | 0.00 | 0.00 | 3.95 |
2564 | 3040 | 1.908066 | GCATTGGTGTCGTCCGTTCC | 61.908 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2565 | 3041 | 0.320421 | CATTGGTGTCGTCCGTTCCT | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2566 | 3042 | 0.037605 | ATTGGTGTCGTCCGTTCCTC | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2567 | 3043 | 2.091102 | TTGGTGTCGTCCGTTCCTCC | 62.091 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2568 | 3044 | 2.260743 | GTGTCGTCCGTTCCTCCC | 59.739 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2569 | 3045 | 2.993264 | TGTCGTCCGTTCCTCCCC | 60.993 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
2570 | 3046 | 4.125695 | GTCGTCCGTTCCTCCCCG | 62.126 | 72.222 | 0.00 | 0.00 | 0.00 | 5.73 |
2571 | 3047 | 4.666253 | TCGTCCGTTCCTCCCCGT | 62.666 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
2572 | 3048 | 4.430765 | CGTCCGTTCCTCCCCGTG | 62.431 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
2573 | 3049 | 4.754667 | GTCCGTTCCTCCCCGTGC | 62.755 | 72.222 | 0.00 | 0.00 | 0.00 | 5.34 |
2577 | 3053 | 4.754667 | GTTCCTCCCCGTGCGTCC | 62.755 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
8 | 9 | 4.557205 | GGCTTATATAGACGTTCAGGGTG | 58.443 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
9 | 10 | 4.868314 | GGCTTATATAGACGTTCAGGGT | 57.132 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
31 | 32 | 3.441572 | TGCCTCTACAGACTAAACCGTAC | 59.558 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
34 | 35 | 2.492484 | AGTGCCTCTACAGACTAAACCG | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
36 | 37 | 5.520649 | GCAATAGTGCCTCTACAGACTAAAC | 59.479 | 44.000 | 3.16 | 0.00 | 45.68 | 2.01 |
55 | 56 | 7.394816 | AGTTCTAAGCTCTAAACCTTGCAATA | 58.605 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
57 | 58 | 5.621193 | AGTTCTAAGCTCTAAACCTTGCAA | 58.379 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
76 | 77 | 3.487574 | CGCAAGATCGTATGAAGGAGTTC | 59.512 | 47.826 | 0.00 | 0.00 | 43.02 | 3.01 |
95 | 96 | 9.322773 | GTATAGTGTATAGTATGATCTACCGCA | 57.677 | 37.037 | 0.00 | 0.00 | 0.00 | 5.69 |
96 | 97 | 8.772705 | GGTATAGTGTATAGTATGATCTACCGC | 58.227 | 40.741 | 0.00 | 0.00 | 0.00 | 5.68 |
97 | 98 | 9.270640 | GGGTATAGTGTATAGTATGATCTACCG | 57.729 | 40.741 | 0.00 | 0.00 | 0.00 | 4.02 |
109 | 110 | 8.134202 | TGATTGTGATGGGGTATAGTGTATAG | 57.866 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
111 | 112 | 7.387265 | TTGATTGTGATGGGGTATAGTGTAT | 57.613 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
118 | 119 | 9.061252 | TCTGATATATTGATTGTGATGGGGTAT | 57.939 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
143 | 144 | 8.668510 | TGAGATAAAAATCTACATCCTGCTTC | 57.331 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
152 | 153 | 8.772250 | ACCCTCTTGATGAGATAAAAATCTACA | 58.228 | 33.333 | 0.00 | 0.00 | 45.39 | 2.74 |
157 | 158 | 6.058183 | CGGACCCTCTTGATGAGATAAAAAT | 58.942 | 40.000 | 0.00 | 0.00 | 45.39 | 1.82 |
158 | 159 | 5.045869 | ACGGACCCTCTTGATGAGATAAAAA | 60.046 | 40.000 | 0.00 | 0.00 | 45.39 | 1.94 |
182 | 183 | 4.470664 | ACGGACACAATATTAACCCAGGTA | 59.529 | 41.667 | 0.00 | 0.00 | 0.00 | 3.08 |
191 | 192 | 7.389330 | ACATGAGACAAAACGGACACAATATTA | 59.611 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
197 | 198 | 2.912771 | ACATGAGACAAAACGGACACA | 58.087 | 42.857 | 0.00 | 0.00 | 0.00 | 3.72 |
198 | 199 | 3.963383 | AACATGAGACAAAACGGACAC | 57.037 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
204 | 205 | 7.331934 | TGAGCTAGATGTAACATGAGACAAAAC | 59.668 | 37.037 | 0.00 | 0.22 | 0.00 | 2.43 |
207 | 208 | 6.530019 | TGAGCTAGATGTAACATGAGACAA | 57.470 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
211 | 212 | 7.758980 | GGTGATATGAGCTAGATGTAACATGAG | 59.241 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
214 | 215 | 7.544804 | TGGTGATATGAGCTAGATGTAACAT | 57.455 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
221 | 222 | 5.512749 | CCAAGCTTGGTGATATGAGCTAGAT | 60.513 | 44.000 | 33.46 | 0.00 | 44.17 | 1.98 |
222 | 223 | 4.202295 | CCAAGCTTGGTGATATGAGCTAGA | 60.202 | 45.833 | 33.46 | 0.00 | 44.17 | 2.43 |
223 | 224 | 4.063689 | CCAAGCTTGGTGATATGAGCTAG | 58.936 | 47.826 | 33.46 | 6.28 | 44.17 | 3.42 |
224 | 225 | 4.077300 | CCAAGCTTGGTGATATGAGCTA | 57.923 | 45.455 | 33.46 | 0.00 | 44.17 | 3.32 |
225 | 226 | 2.928334 | CCAAGCTTGGTGATATGAGCT | 58.072 | 47.619 | 33.46 | 0.00 | 46.71 | 4.09 |
258 | 260 | 3.259902 | GGTGTTAAACCCGACAGATCTC | 58.740 | 50.000 | 0.00 | 0.00 | 44.02 | 2.75 |
270 | 272 | 1.944709 | AGCAAGGTGTCGGTGTTAAAC | 59.055 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
275 | 277 | 2.111043 | CCAGCAAGGTGTCGGTGT | 59.889 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
324 | 326 | 5.038683 | GGACAAAAACCCTAACAAAACTCG | 58.961 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
370 | 372 | 3.967467 | ATTCCATCTTCAAGGAGCCAT | 57.033 | 42.857 | 0.00 | 0.00 | 34.91 | 4.40 |
371 | 373 | 4.385643 | CCTTATTCCATCTTCAAGGAGCCA | 60.386 | 45.833 | 0.00 | 0.00 | 38.42 | 4.75 |
400 | 402 | 2.184533 | TGGAAATGAAGGCTAGACGGA | 58.815 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
414 | 416 | 1.031571 | ATGCGACGCACCATGGAAAT | 61.032 | 50.000 | 27.06 | 2.24 | 43.04 | 2.17 |
419 | 421 | 1.277739 | GATGATGCGACGCACCATG | 59.722 | 57.895 | 33.51 | 0.00 | 43.64 | 3.66 |
435 | 439 | 1.078214 | CCTGCACATGTCCACCGAT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
443 | 447 | 0.250467 | GGAGACACACCTGCACATGT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
445 | 449 | 1.004560 | CGGAGACACACCTGCACAT | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
470 | 474 | 4.828939 | TCTGAGCAAATCAACCAAAGACAT | 59.171 | 37.500 | 0.00 | 0.00 | 37.52 | 3.06 |
481 | 485 | 4.005650 | GACAACCAGATCTGAGCAAATCA | 58.994 | 43.478 | 24.62 | 0.00 | 36.21 | 2.57 |
539 | 553 | 2.120232 | CGCCACTTATGAAGAGTAGCG | 58.880 | 52.381 | 3.06 | 3.06 | 45.50 | 4.26 |
553 | 567 | 1.745232 | TCAGAACAACAAACGCCACT | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
558 | 572 | 1.044725 | GCGCATCAGAACAACAAACG | 58.955 | 50.000 | 0.30 | 0.00 | 0.00 | 3.60 |
560 | 574 | 1.001487 | CCAGCGCATCAGAACAACAAA | 60.001 | 47.619 | 11.47 | 0.00 | 0.00 | 2.83 |
566 | 580 | 2.010145 | TAAGACCAGCGCATCAGAAC | 57.990 | 50.000 | 11.47 | 0.00 | 0.00 | 3.01 |
567 | 581 | 2.554142 | CATAAGACCAGCGCATCAGAA | 58.446 | 47.619 | 11.47 | 0.00 | 0.00 | 3.02 |
568 | 582 | 1.202568 | CCATAAGACCAGCGCATCAGA | 60.203 | 52.381 | 11.47 | 0.00 | 0.00 | 3.27 |
569 | 583 | 1.224075 | CCATAAGACCAGCGCATCAG | 58.776 | 55.000 | 11.47 | 0.00 | 0.00 | 2.90 |
570 | 584 | 0.179048 | CCCATAAGACCAGCGCATCA | 60.179 | 55.000 | 11.47 | 0.00 | 0.00 | 3.07 |
571 | 585 | 0.886490 | CCCCATAAGACCAGCGCATC | 60.886 | 60.000 | 11.47 | 3.87 | 0.00 | 3.91 |
572 | 586 | 1.149174 | CCCCATAAGACCAGCGCAT | 59.851 | 57.895 | 11.47 | 0.00 | 0.00 | 4.73 |
573 | 587 | 2.589540 | CCCCATAAGACCAGCGCA | 59.410 | 61.111 | 11.47 | 0.00 | 0.00 | 6.09 |
574 | 588 | 2.902343 | GCCCCATAAGACCAGCGC | 60.902 | 66.667 | 0.00 | 0.00 | 0.00 | 5.92 |
575 | 589 | 2.203209 | GGCCCCATAAGACCAGCG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
576 | 590 | 0.843984 | TAAGGCCCCATAAGACCAGC | 59.156 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
577 | 591 | 1.202818 | GCTAAGGCCCCATAAGACCAG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
578 | 592 | 0.843984 | GCTAAGGCCCCATAAGACCA | 59.156 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
579 | 593 | 0.843984 | TGCTAAGGCCCCATAAGACC | 59.156 | 55.000 | 0.00 | 0.00 | 37.74 | 3.85 |
580 | 594 | 2.106511 | TCATGCTAAGGCCCCATAAGAC | 59.893 | 50.000 | 0.00 | 0.00 | 37.74 | 3.01 |
581 | 595 | 2.106511 | GTCATGCTAAGGCCCCATAAGA | 59.893 | 50.000 | 0.00 | 0.00 | 37.74 | 2.10 |
582 | 596 | 2.508526 | GTCATGCTAAGGCCCCATAAG | 58.491 | 52.381 | 0.00 | 0.00 | 37.74 | 1.73 |
583 | 597 | 1.202758 | CGTCATGCTAAGGCCCCATAA | 60.203 | 52.381 | 0.00 | 0.00 | 37.74 | 1.90 |
584 | 598 | 0.396435 | CGTCATGCTAAGGCCCCATA | 59.604 | 55.000 | 0.00 | 0.00 | 37.74 | 2.74 |
585 | 599 | 1.149174 | CGTCATGCTAAGGCCCCAT | 59.851 | 57.895 | 0.00 | 0.00 | 37.74 | 4.00 |
586 | 600 | 1.992834 | TCGTCATGCTAAGGCCCCA | 60.993 | 57.895 | 0.00 | 0.00 | 37.74 | 4.96 |
587 | 601 | 1.523938 | GTCGTCATGCTAAGGCCCC | 60.524 | 63.158 | 0.00 | 0.00 | 37.74 | 5.80 |
588 | 602 | 0.107654 | AAGTCGTCATGCTAAGGCCC | 60.108 | 55.000 | 0.00 | 0.00 | 37.74 | 5.80 |
589 | 603 | 1.666189 | GAAAGTCGTCATGCTAAGGCC | 59.334 | 52.381 | 0.00 | 0.00 | 37.74 | 5.19 |
590 | 604 | 2.349886 | CAGAAAGTCGTCATGCTAAGGC | 59.650 | 50.000 | 0.00 | 0.00 | 39.26 | 4.35 |
591 | 605 | 3.849911 | TCAGAAAGTCGTCATGCTAAGG | 58.150 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
592 | 606 | 5.349817 | ACAATCAGAAAGTCGTCATGCTAAG | 59.650 | 40.000 | 0.00 | 0.00 | 0.00 | 2.18 |
593 | 607 | 5.237815 | ACAATCAGAAAGTCGTCATGCTAA | 58.762 | 37.500 | 0.00 | 0.00 | 0.00 | 3.09 |
594 | 608 | 4.820897 | ACAATCAGAAAGTCGTCATGCTA | 58.179 | 39.130 | 0.00 | 0.00 | 0.00 | 3.49 |
595 | 609 | 3.668447 | ACAATCAGAAAGTCGTCATGCT | 58.332 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
596 | 610 | 3.681897 | AGACAATCAGAAAGTCGTCATGC | 59.318 | 43.478 | 0.00 | 0.00 | 37.36 | 4.06 |
597 | 611 | 6.096036 | AGTAGACAATCAGAAAGTCGTCATG | 58.904 | 40.000 | 0.00 | 0.00 | 37.36 | 3.07 |
598 | 612 | 6.274157 | AGTAGACAATCAGAAAGTCGTCAT | 57.726 | 37.500 | 0.00 | 0.00 | 37.36 | 3.06 |
599 | 613 | 5.707242 | AGTAGACAATCAGAAAGTCGTCA | 57.293 | 39.130 | 0.00 | 0.00 | 37.36 | 4.35 |
600 | 614 | 6.609533 | TGTAGTAGACAATCAGAAAGTCGTC | 58.390 | 40.000 | 0.00 | 0.00 | 37.36 | 4.20 |
601 | 615 | 6.570672 | TGTAGTAGACAATCAGAAAGTCGT | 57.429 | 37.500 | 0.00 | 0.00 | 37.36 | 4.34 |
625 | 639 | 0.250338 | GGGAGCCGAACAGAACTTGT | 60.250 | 55.000 | 0.00 | 0.00 | 43.45 | 3.16 |
626 | 640 | 2.544726 | GGGAGCCGAACAGAACTTG | 58.455 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
640 | 654 | 2.355126 | CCATCATCGTCGCGGGAG | 60.355 | 66.667 | 6.13 | 0.00 | 0.00 | 4.30 |
641 | 655 | 4.585526 | GCCATCATCGTCGCGGGA | 62.586 | 66.667 | 6.13 | 4.48 | 0.00 | 5.14 |
648 | 662 | 1.516386 | GACGTGACGCCATCATCGT | 60.516 | 57.895 | 4.25 | 10.72 | 43.25 | 3.73 |
649 | 663 | 0.802222 | AAGACGTGACGCCATCATCG | 60.802 | 55.000 | 4.25 | 6.25 | 40.28 | 3.84 |
650 | 664 | 0.924090 | GAAGACGTGACGCCATCATC | 59.076 | 55.000 | 4.25 | 0.00 | 40.28 | 2.92 |
651 | 665 | 0.246360 | TGAAGACGTGACGCCATCAT | 59.754 | 50.000 | 4.25 | 0.00 | 40.28 | 2.45 |
652 | 666 | 0.246360 | ATGAAGACGTGACGCCATCA | 59.754 | 50.000 | 4.25 | 2.58 | 33.79 | 3.07 |
653 | 667 | 0.924090 | GATGAAGACGTGACGCCATC | 59.076 | 55.000 | 4.25 | 9.43 | 0.00 | 3.51 |
654 | 668 | 0.532573 | AGATGAAGACGTGACGCCAT | 59.467 | 50.000 | 4.25 | 3.62 | 0.00 | 4.40 |
655 | 669 | 0.317160 | AAGATGAAGACGTGACGCCA | 59.683 | 50.000 | 4.25 | 0.00 | 0.00 | 5.69 |
656 | 670 | 0.716108 | CAAGATGAAGACGTGACGCC | 59.284 | 55.000 | 4.25 | 0.00 | 0.00 | 5.68 |
657 | 671 | 0.093705 | GCAAGATGAAGACGTGACGC | 59.906 | 55.000 | 4.25 | 0.00 | 0.00 | 5.19 |
658 | 672 | 1.702886 | AGCAAGATGAAGACGTGACG | 58.297 | 50.000 | 2.24 | 2.24 | 0.00 | 4.35 |
659 | 673 | 3.059884 | TGAAGCAAGATGAAGACGTGAC | 58.940 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
660 | 674 | 3.243873 | ACTGAAGCAAGATGAAGACGTGA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
661 | 675 | 3.062763 | ACTGAAGCAAGATGAAGACGTG | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
662 | 676 | 3.062763 | CACTGAAGCAAGATGAAGACGT | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
663 | 677 | 3.062763 | ACACTGAAGCAAGATGAAGACG | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
664 | 678 | 5.429957 | AAACACTGAAGCAAGATGAAGAC | 57.570 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
665 | 679 | 8.097038 | ACTATAAACACTGAAGCAAGATGAAGA | 58.903 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
666 | 680 | 8.261492 | ACTATAAACACTGAAGCAAGATGAAG | 57.739 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
667 | 681 | 7.063426 | CGACTATAAACACTGAAGCAAGATGAA | 59.937 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
668 | 682 | 6.531594 | CGACTATAAACACTGAAGCAAGATGA | 59.468 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
669 | 683 | 6.311445 | ACGACTATAAACACTGAAGCAAGATG | 59.689 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
670 | 684 | 6.398918 | ACGACTATAAACACTGAAGCAAGAT | 58.601 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
671 | 685 | 5.779922 | ACGACTATAAACACTGAAGCAAGA | 58.220 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
672 | 686 | 5.220043 | CGACGACTATAAACACTGAAGCAAG | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 4.01 |
673 | 687 | 4.619760 | CGACGACTATAAACACTGAAGCAA | 59.380 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
674 | 688 | 4.163552 | CGACGACTATAAACACTGAAGCA | 58.836 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
675 | 689 | 3.546670 | CCGACGACTATAAACACTGAAGC | 59.453 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
676 | 690 | 4.730657 | ACCGACGACTATAAACACTGAAG | 58.269 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
677 | 691 | 4.771590 | ACCGACGACTATAAACACTGAA | 57.228 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
678 | 692 | 5.178061 | TCTACCGACGACTATAAACACTGA | 58.822 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
679 | 693 | 5.475273 | TCTACCGACGACTATAAACACTG | 57.525 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
680 | 694 | 6.989169 | ACTATCTACCGACGACTATAAACACT | 59.011 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
681 | 695 | 7.170658 | AGACTATCTACCGACGACTATAAACAC | 59.829 | 40.741 | 0.00 | 0.00 | 0.00 | 3.32 |
682 | 696 | 7.212976 | AGACTATCTACCGACGACTATAAACA | 58.787 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
683 | 697 | 7.650834 | AGACTATCTACCGACGACTATAAAC | 57.349 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
684 | 698 | 9.363763 | CATAGACTATCTACCGACGACTATAAA | 57.636 | 37.037 | 0.00 | 0.00 | 30.79 | 1.40 |
685 | 699 | 7.978414 | CCATAGACTATCTACCGACGACTATAA | 59.022 | 40.741 | 0.00 | 0.00 | 30.79 | 0.98 |
686 | 700 | 7.340487 | TCCATAGACTATCTACCGACGACTATA | 59.660 | 40.741 | 0.00 | 0.00 | 30.79 | 1.31 |
687 | 701 | 6.154192 | TCCATAGACTATCTACCGACGACTAT | 59.846 | 42.308 | 0.00 | 0.00 | 30.79 | 2.12 |
688 | 702 | 5.478332 | TCCATAGACTATCTACCGACGACTA | 59.522 | 44.000 | 0.00 | 0.00 | 30.79 | 2.59 |
689 | 703 | 4.282957 | TCCATAGACTATCTACCGACGACT | 59.717 | 45.833 | 0.00 | 0.00 | 30.79 | 4.18 |
690 | 704 | 4.564041 | TCCATAGACTATCTACCGACGAC | 58.436 | 47.826 | 0.00 | 0.00 | 30.79 | 4.34 |
691 | 705 | 4.879197 | TCCATAGACTATCTACCGACGA | 57.121 | 45.455 | 0.00 | 0.00 | 30.79 | 4.20 |
692 | 706 | 6.072618 | ACAAATCCATAGACTATCTACCGACG | 60.073 | 42.308 | 0.00 | 0.00 | 30.79 | 5.12 |
693 | 707 | 7.085116 | CACAAATCCATAGACTATCTACCGAC | 58.915 | 42.308 | 0.00 | 0.00 | 30.79 | 4.79 |
694 | 708 | 6.776116 | ACACAAATCCATAGACTATCTACCGA | 59.224 | 38.462 | 0.00 | 0.00 | 30.79 | 4.69 |
695 | 709 | 6.982852 | ACACAAATCCATAGACTATCTACCG | 58.017 | 40.000 | 0.00 | 0.00 | 30.79 | 4.02 |
723 | 737 | 6.197364 | AGACAATACAACGAACACCAAAAA | 57.803 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
724 | 738 | 5.821516 | AGACAATACAACGAACACCAAAA | 57.178 | 34.783 | 0.00 | 0.00 | 0.00 | 2.44 |
725 | 739 | 5.354513 | TCAAGACAATACAACGAACACCAAA | 59.645 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
726 | 740 | 4.876679 | TCAAGACAATACAACGAACACCAA | 59.123 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
727 | 741 | 4.443621 | TCAAGACAATACAACGAACACCA | 58.556 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
728 | 742 | 5.607119 | ATCAAGACAATACAACGAACACC | 57.393 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
729 | 743 | 8.996988 | TTAAATCAAGACAATACAACGAACAC | 57.003 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
730 | 744 | 9.047371 | TCTTAAATCAAGACAATACAACGAACA | 57.953 | 29.630 | 0.00 | 0.00 | 38.39 | 3.18 |
744 | 758 | 6.541278 | TCCGATCTACTCGTCTTAAATCAAGA | 59.459 | 38.462 | 0.00 | 0.00 | 46.18 | 3.02 |
745 | 759 | 6.726230 | TCCGATCTACTCGTCTTAAATCAAG | 58.274 | 40.000 | 0.00 | 0.00 | 46.18 | 3.02 |
746 | 760 | 6.688637 | TCCGATCTACTCGTCTTAAATCAA | 57.311 | 37.500 | 0.00 | 0.00 | 46.18 | 2.57 |
747 | 761 | 6.318144 | ACTTCCGATCTACTCGTCTTAAATCA | 59.682 | 38.462 | 0.00 | 0.00 | 46.18 | 2.57 |
748 | 762 | 6.727215 | ACTTCCGATCTACTCGTCTTAAATC | 58.273 | 40.000 | 0.00 | 0.00 | 46.18 | 2.17 |
749 | 763 | 6.696441 | ACTTCCGATCTACTCGTCTTAAAT | 57.304 | 37.500 | 0.00 | 0.00 | 46.18 | 1.40 |
750 | 764 | 6.506500 | AACTTCCGATCTACTCGTCTTAAA | 57.493 | 37.500 | 0.00 | 0.00 | 46.18 | 1.52 |
751 | 765 | 6.506500 | AAACTTCCGATCTACTCGTCTTAA | 57.493 | 37.500 | 0.00 | 0.00 | 46.18 | 1.85 |
752 | 766 | 6.506500 | AAAACTTCCGATCTACTCGTCTTA | 57.493 | 37.500 | 0.00 | 0.00 | 46.18 | 2.10 |
753 | 767 | 5.388408 | AAAACTTCCGATCTACTCGTCTT | 57.612 | 39.130 | 0.00 | 0.00 | 46.18 | 3.01 |
754 | 768 | 5.388408 | AAAAACTTCCGATCTACTCGTCT | 57.612 | 39.130 | 0.00 | 0.00 | 46.18 | 4.18 |
775 | 789 | 5.048643 | TCGCCCGATCACATTTTTCTAAAAA | 60.049 | 36.000 | 3.29 | 3.29 | 41.59 | 1.94 |
776 | 790 | 4.456222 | TCGCCCGATCACATTTTTCTAAAA | 59.544 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
777 | 791 | 4.004314 | TCGCCCGATCACATTTTTCTAAA | 58.996 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
778 | 792 | 3.601435 | TCGCCCGATCACATTTTTCTAA | 58.399 | 40.909 | 0.00 | 0.00 | 0.00 | 2.10 |
779 | 793 | 3.254470 | TCGCCCGATCACATTTTTCTA | 57.746 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
780 | 794 | 2.107950 | TCGCCCGATCACATTTTTCT | 57.892 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
790 | 804 | 2.125912 | CCATCCGATCGCCCGATC | 60.126 | 66.667 | 18.06 | 18.06 | 45.42 | 3.69 |
791 | 805 | 4.379243 | GCCATCCGATCGCCCGAT | 62.379 | 66.667 | 10.32 | 4.46 | 37.59 | 4.18 |
793 | 807 | 3.295304 | TATGCCATCCGATCGCCCG | 62.295 | 63.158 | 10.32 | 0.00 | 0.00 | 6.13 |
794 | 808 | 1.448540 | CTATGCCATCCGATCGCCC | 60.449 | 63.158 | 10.32 | 0.00 | 0.00 | 6.13 |
795 | 809 | 1.016130 | CACTATGCCATCCGATCGCC | 61.016 | 60.000 | 10.32 | 0.00 | 0.00 | 5.54 |
796 | 810 | 0.038251 | TCACTATGCCATCCGATCGC | 60.038 | 55.000 | 10.32 | 0.00 | 0.00 | 4.58 |
797 | 811 | 1.988063 | CTCACTATGCCATCCGATCG | 58.012 | 55.000 | 8.51 | 8.51 | 0.00 | 3.69 |
798 | 812 | 1.719600 | GCTCACTATGCCATCCGATC | 58.280 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
799 | 813 | 0.037882 | CGCTCACTATGCCATCCGAT | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
800 | 814 | 1.363807 | CGCTCACTATGCCATCCGA | 59.636 | 57.895 | 0.00 | 0.00 | 0.00 | 4.55 |
801 | 815 | 2.313172 | GCGCTCACTATGCCATCCG | 61.313 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
802 | 816 | 2.313172 | CGCGCTCACTATGCCATCC | 61.313 | 63.158 | 5.56 | 0.00 | 0.00 | 3.51 |
803 | 817 | 2.313172 | CCGCGCTCACTATGCCATC | 61.313 | 63.158 | 5.56 | 0.00 | 0.00 | 3.51 |
804 | 818 | 2.280389 | CCGCGCTCACTATGCCAT | 60.280 | 61.111 | 5.56 | 0.00 | 0.00 | 4.40 |
805 | 819 | 3.716539 | GACCGCGCTCACTATGCCA | 62.717 | 63.158 | 5.56 | 0.00 | 0.00 | 4.92 |
806 | 820 | 2.962253 | GACCGCGCTCACTATGCC | 60.962 | 66.667 | 5.56 | 0.00 | 0.00 | 4.40 |
807 | 821 | 3.323136 | CGACCGCGCTCACTATGC | 61.323 | 66.667 | 5.56 | 0.00 | 0.00 | 3.14 |
808 | 822 | 1.939785 | GTCGACCGCGCTCACTATG | 60.940 | 63.158 | 5.56 | 0.00 | 37.46 | 2.23 |
809 | 823 | 2.408022 | GTCGACCGCGCTCACTAT | 59.592 | 61.111 | 5.56 | 0.00 | 37.46 | 2.12 |
810 | 824 | 4.156622 | CGTCGACCGCGCTCACTA | 62.157 | 66.667 | 10.58 | 0.00 | 37.46 | 2.74 |
827 | 841 | 2.350498 | TCGGCTAACTTTATCGCTTTGC | 59.650 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
828 | 842 | 3.242316 | GGTCGGCTAACTTTATCGCTTTG | 60.242 | 47.826 | 0.00 | 0.00 | 0.00 | 2.77 |
829 | 843 | 2.934553 | GGTCGGCTAACTTTATCGCTTT | 59.065 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
830 | 844 | 2.547826 | GGTCGGCTAACTTTATCGCTT | 58.452 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
831 | 845 | 1.535437 | CGGTCGGCTAACTTTATCGCT | 60.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
832 | 846 | 0.850856 | CGGTCGGCTAACTTTATCGC | 59.149 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
833 | 847 | 2.480224 | TCGGTCGGCTAACTTTATCG | 57.520 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
834 | 848 | 4.380974 | CGTATTCGGTCGGCTAACTTTATC | 59.619 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
835 | 849 | 4.036734 | TCGTATTCGGTCGGCTAACTTTAT | 59.963 | 41.667 | 0.00 | 0.00 | 37.69 | 1.40 |
836 | 850 | 3.376859 | TCGTATTCGGTCGGCTAACTTTA | 59.623 | 43.478 | 0.00 | 0.00 | 37.69 | 1.85 |
837 | 851 | 2.164219 | TCGTATTCGGTCGGCTAACTTT | 59.836 | 45.455 | 0.00 | 0.00 | 37.69 | 2.66 |
838 | 852 | 1.745087 | TCGTATTCGGTCGGCTAACTT | 59.255 | 47.619 | 0.00 | 0.00 | 37.69 | 2.66 |
839 | 853 | 1.332997 | CTCGTATTCGGTCGGCTAACT | 59.667 | 52.381 | 0.00 | 0.00 | 37.69 | 2.24 |
840 | 854 | 1.751552 | CTCGTATTCGGTCGGCTAAC | 58.248 | 55.000 | 0.00 | 0.00 | 37.69 | 2.34 |
841 | 855 | 0.029834 | GCTCGTATTCGGTCGGCTAA | 59.970 | 55.000 | 0.00 | 0.00 | 37.69 | 3.09 |
842 | 856 | 1.650912 | GCTCGTATTCGGTCGGCTA | 59.349 | 57.895 | 0.00 | 0.00 | 37.69 | 3.93 |
843 | 857 | 2.412112 | GCTCGTATTCGGTCGGCT | 59.588 | 61.111 | 0.00 | 0.00 | 37.69 | 5.52 |
844 | 858 | 2.624437 | AAGGCTCGTATTCGGTCGGC | 62.624 | 60.000 | 0.00 | 0.00 | 37.69 | 5.54 |
848 | 862 | 1.276989 | TGGAAAAGGCTCGTATTCGGT | 59.723 | 47.619 | 0.00 | 0.00 | 37.69 | 4.69 |
856 | 870 | 1.234615 | TTCGGCTTGGAAAAGGCTCG | 61.235 | 55.000 | 9.89 | 0.00 | 42.51 | 5.03 |
884 | 898 | 1.064060 | CGCCAGTCGGATTCAAAATCC | 59.936 | 52.381 | 8.39 | 8.39 | 34.90 | 3.01 |
974 | 1008 | 1.127701 | CGCAAGCTAGATCTCTTCGC | 58.872 | 55.000 | 0.00 | 3.91 | 0.00 | 4.70 |
1011 | 1061 | 2.777960 | AAAGGGAACTGGGGCTGCA | 61.778 | 57.895 | 0.50 | 0.00 | 42.68 | 4.41 |
1133 | 1210 | 5.404946 | CATCGAAATTCAGCTTCAACCATT | 58.595 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
1628 | 1712 | 1.561542 | CCCATCTTGGAAGCTACCACT | 59.438 | 52.381 | 0.00 | 0.00 | 40.96 | 4.00 |
1746 | 1844 | 1.476488 | TGCAGATCCATCTCGACGAAA | 59.524 | 47.619 | 0.00 | 0.00 | 34.22 | 3.46 |
1776 | 1898 | 0.659427 | CGCTACAATCCGGTCGACTA | 59.341 | 55.000 | 16.46 | 1.71 | 0.00 | 2.59 |
1794 | 1925 | 4.718940 | ACAAAGGATTAATTTGCCCTCG | 57.281 | 40.909 | 0.90 | 0.00 | 40.54 | 4.63 |
1835 | 1967 | 2.049228 | GTGTAAAGACCTCGTCACGTG | 58.951 | 52.381 | 9.94 | 9.94 | 34.60 | 4.49 |
1884 | 2042 | 4.136796 | AGCTGCTTCAACAGTAAACATCA | 58.863 | 39.130 | 0.00 | 0.00 | 39.96 | 3.07 |
1912 | 2070 | 2.640346 | TCGATGTTACTGTAAGCGCA | 57.360 | 45.000 | 11.47 | 0.00 | 37.60 | 6.09 |
1993 | 2159 | 9.314321 | GCACAGCTACTTAAAGAAATCATAGTA | 57.686 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2092 | 2548 | 1.188219 | TCAGGAGTCTCTGCGCCTTT | 61.188 | 55.000 | 4.18 | 0.00 | 36.52 | 3.11 |
2152 | 2609 | 1.613630 | ATCCTGGCCTTCGAGGTGT | 60.614 | 57.895 | 3.32 | 0.00 | 37.80 | 4.16 |
2195 | 2652 | 3.790437 | CCGCCCATGTCCAGCTCT | 61.790 | 66.667 | 0.00 | 0.00 | 0.00 | 4.09 |
2203 | 2660 | 2.122797 | TCGTCGATACCGCCCATGT | 61.123 | 57.895 | 0.00 | 0.00 | 35.37 | 3.21 |
2208 | 2665 | 2.649975 | CGTGTCGTCGATACCGCC | 60.650 | 66.667 | 15.40 | 0.00 | 35.37 | 6.13 |
2210 | 2667 | 2.098871 | TGCGTGTCGTCGATACCG | 59.901 | 61.111 | 15.40 | 11.66 | 37.07 | 4.02 |
2214 | 2671 | 1.934220 | ATCCTGTGCGTGTCGTCGAT | 61.934 | 55.000 | 0.00 | 0.00 | 0.00 | 3.59 |
2280 | 2739 | 3.062466 | CGCCTGTGAGTCGGGAGA | 61.062 | 66.667 | 0.00 | 0.00 | 43.66 | 3.71 |
2287 | 2746 | 2.421739 | GTGGTGACGCCTGTGAGT | 59.578 | 61.111 | 6.60 | 0.00 | 38.35 | 3.41 |
2361 | 2828 | 2.590007 | GCTAGGACATGGCGGCTG | 60.590 | 66.667 | 11.43 | 8.69 | 0.00 | 4.85 |
2395 | 2862 | 1.683441 | CTTTGGCGGGAGGGTAACT | 59.317 | 57.895 | 0.00 | 0.00 | 0.00 | 2.24 |
2397 | 2864 | 1.135068 | TTCCTTTGGCGGGAGGGTAA | 61.135 | 55.000 | 1.50 | 0.00 | 34.06 | 2.85 |
2398 | 2865 | 0.917333 | ATTCCTTTGGCGGGAGGGTA | 60.917 | 55.000 | 1.50 | 0.00 | 34.06 | 3.69 |
2445 | 2912 | 1.218047 | CGGAGAAGATGACGGCCAA | 59.782 | 57.895 | 2.24 | 0.00 | 0.00 | 4.52 |
2447 | 2914 | 2.586357 | GCGGAGAAGATGACGGCC | 60.586 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
2471 | 2947 | 3.991536 | GAAGAGGAGACCGCACCGC | 62.992 | 68.421 | 0.00 | 0.00 | 0.00 | 5.68 |
2472 | 2948 | 2.182030 | GAAGAGGAGACCGCACCG | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
2473 | 2949 | 2.182030 | CGAAGAGGAGACCGCACC | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
2505 | 2981 | 2.357034 | CGTGGGTGTCGACAAGGG | 60.357 | 66.667 | 21.95 | 4.40 | 0.00 | 3.95 |
2510 | 2986 | 4.736896 | GAGCCCGTGGGTGTCGAC | 62.737 | 72.222 | 9.11 | 9.11 | 37.65 | 4.20 |
2535 | 3011 | 2.050350 | CACCAATGCCTGCAGGAGG | 61.050 | 63.158 | 37.21 | 29.30 | 46.13 | 4.30 |
2536 | 3012 | 1.303888 | ACACCAATGCCTGCAGGAG | 60.304 | 57.895 | 37.21 | 20.62 | 37.39 | 3.69 |
2537 | 3013 | 1.303561 | GACACCAATGCCTGCAGGA | 60.304 | 57.895 | 37.21 | 21.13 | 37.39 | 3.86 |
2538 | 3014 | 2.693762 | CGACACCAATGCCTGCAGG | 61.694 | 63.158 | 29.34 | 29.34 | 38.53 | 4.85 |
2539 | 3015 | 1.915614 | GACGACACCAATGCCTGCAG | 61.916 | 60.000 | 6.78 | 6.78 | 0.00 | 4.41 |
2540 | 3016 | 1.965930 | GACGACACCAATGCCTGCA | 60.966 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
2541 | 3017 | 2.690778 | GGACGACACCAATGCCTGC | 61.691 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2542 | 3018 | 2.390599 | CGGACGACACCAATGCCTG | 61.391 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2543 | 3019 | 2.047274 | CGGACGACACCAATGCCT | 60.047 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
2544 | 3020 | 1.908066 | GAACGGACGACACCAATGCC | 61.908 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2545 | 3021 | 1.495951 | GAACGGACGACACCAATGC | 59.504 | 57.895 | 0.00 | 0.00 | 0.00 | 3.56 |
2546 | 3022 | 0.320421 | AGGAACGGACGACACCAATG | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
2547 | 3023 | 0.037605 | GAGGAACGGACGACACCAAT | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2548 | 3024 | 1.364901 | GAGGAACGGACGACACCAA | 59.635 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2549 | 3025 | 2.567497 | GGAGGAACGGACGACACCA | 61.567 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
2550 | 3026 | 2.260743 | GGAGGAACGGACGACACC | 59.739 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
2551 | 3027 | 2.260743 | GGGAGGAACGGACGACAC | 59.739 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2552 | 3028 | 2.993264 | GGGGAGGAACGGACGACA | 60.993 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
2553 | 3029 | 4.125695 | CGGGGAGGAACGGACGAC | 62.126 | 72.222 | 0.00 | 0.00 | 0.00 | 4.34 |
2554 | 3030 | 4.666253 | ACGGGGAGGAACGGACGA | 62.666 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2555 | 3031 | 4.430765 | CACGGGGAGGAACGGACG | 62.431 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
2556 | 3032 | 4.754667 | GCACGGGGAGGAACGGAC | 62.755 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
2560 | 3036 | 4.754667 | GGACGCACGGGGAGGAAC | 62.755 | 72.222 | 0.00 | 0.00 | 0.00 | 3.62 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.