Multiple sequence alignment - TraesCS2A01G432300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G432300 chr2A 100.000 2222 0 0 1 2222 685379595 685381816 0.000000e+00 4104.0
1 TraesCS2A01G432300 chr2A 88.606 667 40 18 825 1459 685373451 685374113 0.000000e+00 778.0
2 TraesCS2A01G432300 chr2A 84.501 471 47 17 990 1445 685410653 685411112 2.020000e-120 442.0
3 TraesCS2A01G432300 chr2A 93.697 238 15 0 990 1227 685626821 685627058 7.550000e-95 357.0
4 TraesCS2A01G432300 chr2A 82.353 425 30 17 1531 1942 685374179 685374571 5.920000e-86 327.0
5 TraesCS2A01G432300 chr2D 84.713 1027 73 35 825 1782 542543760 542544771 0.000000e+00 950.0
6 TraesCS2A01G432300 chr2D 81.989 744 64 32 777 1459 542328526 542329260 3.200000e-158 568.0
7 TraesCS2A01G432300 chr2D 80.117 684 47 39 827 1434 542710345 542711015 5.670000e-116 427.0
8 TraesCS2A01G432300 chr2D 87.532 385 15 16 1454 1817 542329306 542329678 4.410000e-112 414.0
9 TraesCS2A01G432300 chr2D 86.737 377 18 13 1454 1817 542711074 542711431 7.440000e-105 390.0
10 TraesCS2A01G432300 chr2D 89.796 245 16 6 413 649 542543298 542543541 2.770000e-79 305.0
11 TraesCS2A01G432300 chr2D 80.645 372 20 23 1876 2222 542711447 542711791 7.930000e-60 241.0
12 TraesCS2A01G432300 chr2D 97.403 77 2 0 2146 2222 542329935 542330011 4.980000e-27 132.0
13 TraesCS2A01G432300 chr2D 91.781 73 6 0 1387 1459 542778444 542778516 3.900000e-18 102.0
14 TraesCS2A01G432300 chr2D 89.873 79 3 3 1870 1943 542329687 542329765 1.820000e-16 97.1
15 TraesCS2A01G432300 chr2D 92.424 66 5 0 1957 2022 542329811 542329876 6.530000e-16 95.3
16 TraesCS2A01G432300 chr2D 93.220 59 4 0 769 827 542543673 542543731 1.090000e-13 87.9
17 TraesCS2A01G432300 chr2B 85.135 666 51 23 838 1459 647450870 647451531 2.410000e-179 638.0
18 TraesCS2A01G432300 chr2B 91.582 297 19 4 990 1281 647539051 647539346 2.660000e-109 405.0
19 TraesCS2A01G432300 chr2B 86.898 374 25 14 1454 1817 647539685 647540044 4.450000e-107 398.0
20 TraesCS2A01G432300 chr2B 91.322 242 20 1 999 1240 647603857 647604097 1.640000e-86 329.0
21 TraesCS2A01G432300 chr2B 89.726 146 12 3 481 623 647538341 647538486 1.360000e-42 183.0
22 TraesCS2A01G432300 chr2B 94.521 73 4 0 1387 1459 647539560 647539632 1.800000e-21 113.0
23 TraesCS2A01G432300 chr2B 90.541 74 3 2 1876 1945 647540060 647540133 6.530000e-16 95.3
24 TraesCS2A01G432300 chr2B 79.355 155 12 11 1876 2010 647451968 647452122 8.450000e-15 91.6
25 TraesCS2A01G432300 chr2B 100.000 42 0 0 778 819 647450789 647450830 6.580000e-11 78.7
26 TraesCS2A01G432300 chr2B 100.000 36 0 0 1311 1346 647539465 647539500 1.420000e-07 67.6
27 TraesCS2A01G432300 chr2B 94.286 35 0 2 2017 2051 647540709 647540741 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G432300 chr2A 685379595 685381816 2221 False 4104.000000 4104 100.000000 1 2222 1 chr2A.!!$F1 2221
1 TraesCS2A01G432300 chr2A 685373451 685374571 1120 False 552.500000 778 85.479500 825 1942 2 chr2A.!!$F4 1117
2 TraesCS2A01G432300 chr2D 542543298 542544771 1473 False 447.633333 950 89.243000 413 1782 3 chr2D.!!$F3 1369
3 TraesCS2A01G432300 chr2D 542710345 542711791 1446 False 352.666667 427 82.499667 827 2222 3 chr2D.!!$F4 1395
4 TraesCS2A01G432300 chr2D 542328526 542330011 1485 False 261.280000 568 89.844200 777 2222 5 chr2D.!!$F2 1445
5 TraesCS2A01G432300 chr2B 647450789 647452122 1333 False 269.433333 638 88.163333 778 2010 3 chr2B.!!$F2 1232

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
213 214 0.037303 ACTTGGCACCACATGGAGAG 59.963 55.0 4.53 0.0 38.94 3.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1751 2047 0.100682 GCAGCGACGGAGATTCTGTA 59.899 55.0 0.0 0.0 35.83 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.603094 TGTATCTAGGAAGGACAGTGGA 57.397 45.455 0.00 0.00 0.00 4.02
22 23 4.942944 TGTATCTAGGAAGGACAGTGGAA 58.057 43.478 0.00 0.00 0.00 3.53
23 24 5.338632 TGTATCTAGGAAGGACAGTGGAAA 58.661 41.667 0.00 0.00 0.00 3.13
24 25 4.828072 ATCTAGGAAGGACAGTGGAAAC 57.172 45.455 0.00 0.00 0.00 2.78
25 26 3.858135 TCTAGGAAGGACAGTGGAAACT 58.142 45.455 0.00 0.00 0.00 2.66
26 27 4.232091 TCTAGGAAGGACAGTGGAAACTT 58.768 43.478 0.00 0.00 0.00 2.66
27 28 3.953542 AGGAAGGACAGTGGAAACTTT 57.046 42.857 0.00 0.00 0.00 2.66
28 29 5.842328 TCTAGGAAGGACAGTGGAAACTTTA 59.158 40.000 0.00 0.00 0.00 1.85
29 30 4.715713 AGGAAGGACAGTGGAAACTTTAC 58.284 43.478 0.00 0.00 0.00 2.01
30 31 4.165372 AGGAAGGACAGTGGAAACTTTACA 59.835 41.667 0.00 0.00 0.00 2.41
31 32 5.070685 GGAAGGACAGTGGAAACTTTACAT 58.929 41.667 0.00 0.00 0.00 2.29
32 33 5.048713 GGAAGGACAGTGGAAACTTTACATG 60.049 44.000 0.00 0.00 0.00 3.21
33 34 5.304686 AGGACAGTGGAAACTTTACATGA 57.695 39.130 0.00 0.00 0.00 3.07
34 35 5.880901 AGGACAGTGGAAACTTTACATGAT 58.119 37.500 0.00 0.00 0.00 2.45
35 36 6.306987 AGGACAGTGGAAACTTTACATGATT 58.693 36.000 0.00 0.00 0.00 2.57
36 37 7.458397 AGGACAGTGGAAACTTTACATGATTA 58.542 34.615 0.00 0.00 0.00 1.75
37 38 7.942341 AGGACAGTGGAAACTTTACATGATTAA 59.058 33.333 0.00 0.00 0.00 1.40
38 39 8.573035 GGACAGTGGAAACTTTACATGATTAAA 58.427 33.333 0.00 0.00 0.00 1.52
39 40 9.394477 GACAGTGGAAACTTTACATGATTAAAC 57.606 33.333 0.00 0.00 0.00 2.01
40 41 8.357402 ACAGTGGAAACTTTACATGATTAAACC 58.643 33.333 0.00 0.00 0.00 3.27
41 42 7.537306 CAGTGGAAACTTTACATGATTAAACCG 59.463 37.037 0.00 0.00 0.00 4.44
42 43 7.229907 AGTGGAAACTTTACATGATTAAACCGT 59.770 33.333 0.00 0.00 0.00 4.83
43 44 7.325097 GTGGAAACTTTACATGATTAAACCGTG 59.675 37.037 0.00 0.00 0.00 4.94
44 45 6.804783 GGAAACTTTACATGATTAAACCGTGG 59.195 38.462 0.00 0.00 0.00 4.94
45 46 7.308710 GGAAACTTTACATGATTAAACCGTGGA 60.309 37.037 0.00 0.00 0.00 4.02
46 47 6.737254 ACTTTACATGATTAAACCGTGGAG 57.263 37.500 0.00 3.83 0.00 3.86
48 49 2.365582 ACATGATTAAACCGTGGAGGC 58.634 47.619 0.00 0.00 46.52 4.70
49 50 2.026262 ACATGATTAAACCGTGGAGGCT 60.026 45.455 0.00 0.00 46.52 4.58
50 51 3.199071 ACATGATTAAACCGTGGAGGCTA 59.801 43.478 0.00 0.00 46.52 3.93
51 52 4.141482 ACATGATTAAACCGTGGAGGCTAT 60.141 41.667 0.00 0.00 46.52 2.97
52 53 4.497291 TGATTAAACCGTGGAGGCTATT 57.503 40.909 0.00 0.00 46.52 1.73
53 54 4.850680 TGATTAAACCGTGGAGGCTATTT 58.149 39.130 0.00 0.00 46.52 1.40
54 55 4.879545 TGATTAAACCGTGGAGGCTATTTC 59.120 41.667 0.00 0.00 46.52 2.17
55 56 1.734163 AAACCGTGGAGGCTATTTCG 58.266 50.000 0.00 0.00 46.52 3.46
56 57 0.899720 AACCGTGGAGGCTATTTCGA 59.100 50.000 0.00 0.00 46.52 3.71
57 58 0.460311 ACCGTGGAGGCTATTTCGAG 59.540 55.000 0.00 0.00 46.52 4.04
58 59 0.249489 CCGTGGAGGCTATTTCGAGG 60.249 60.000 0.00 0.00 0.00 4.63
59 60 0.744874 CGTGGAGGCTATTTCGAGGA 59.255 55.000 0.00 0.00 0.00 3.71
60 61 1.136305 CGTGGAGGCTATTTCGAGGAA 59.864 52.381 0.00 0.00 0.00 3.36
61 62 2.418197 CGTGGAGGCTATTTCGAGGAAA 60.418 50.000 0.00 0.00 35.94 3.13
62 63 3.606687 GTGGAGGCTATTTCGAGGAAAA 58.393 45.455 0.00 0.00 35.11 2.29
63 64 4.007659 GTGGAGGCTATTTCGAGGAAAAA 58.992 43.478 0.00 0.00 35.11 1.94
86 87 7.751768 AAAAGAGGAAGTTTAATGGAGACTG 57.248 36.000 0.00 0.00 0.00 3.51
87 88 4.837972 AGAGGAAGTTTAATGGAGACTGC 58.162 43.478 0.00 0.00 0.00 4.40
88 89 4.534103 AGAGGAAGTTTAATGGAGACTGCT 59.466 41.667 0.00 0.00 0.00 4.24
89 90 4.583871 AGGAAGTTTAATGGAGACTGCTG 58.416 43.478 0.00 0.00 0.00 4.41
90 91 3.691609 GGAAGTTTAATGGAGACTGCTGG 59.308 47.826 0.00 0.00 0.00 4.85
91 92 3.356529 AGTTTAATGGAGACTGCTGGG 57.643 47.619 0.00 0.00 0.00 4.45
92 93 2.644798 AGTTTAATGGAGACTGCTGGGT 59.355 45.455 0.00 0.00 0.00 4.51
93 94 3.074538 AGTTTAATGGAGACTGCTGGGTT 59.925 43.478 0.00 0.00 0.00 4.11
94 95 3.806949 TTAATGGAGACTGCTGGGTTT 57.193 42.857 0.00 0.00 0.00 3.27
95 96 2.683211 AATGGAGACTGCTGGGTTTT 57.317 45.000 0.00 0.00 0.00 2.43
96 97 2.206576 ATGGAGACTGCTGGGTTTTC 57.793 50.000 0.00 0.00 0.00 2.29
97 98 1.140312 TGGAGACTGCTGGGTTTTCT 58.860 50.000 0.00 0.00 0.00 2.52
98 99 1.072331 TGGAGACTGCTGGGTTTTCTC 59.928 52.381 0.00 0.00 33.33 2.87
99 100 1.349357 GGAGACTGCTGGGTTTTCTCT 59.651 52.381 7.70 0.00 34.36 3.10
100 101 2.567615 GGAGACTGCTGGGTTTTCTCTA 59.432 50.000 7.70 0.00 34.36 2.43
101 102 3.198853 GGAGACTGCTGGGTTTTCTCTAT 59.801 47.826 7.70 0.00 34.36 1.98
102 103 4.406003 GGAGACTGCTGGGTTTTCTCTATA 59.594 45.833 7.70 0.00 34.36 1.31
103 104 5.104900 GGAGACTGCTGGGTTTTCTCTATAA 60.105 44.000 7.70 0.00 34.36 0.98
104 105 6.408662 GGAGACTGCTGGGTTTTCTCTATAAT 60.409 42.308 7.70 0.00 34.36 1.28
105 106 6.352516 AGACTGCTGGGTTTTCTCTATAATG 58.647 40.000 0.00 0.00 0.00 1.90
106 107 5.440610 ACTGCTGGGTTTTCTCTATAATGG 58.559 41.667 0.00 0.00 0.00 3.16
107 108 5.191722 ACTGCTGGGTTTTCTCTATAATGGA 59.808 40.000 0.00 0.00 0.00 3.41
108 109 6.126361 ACTGCTGGGTTTTCTCTATAATGGAT 60.126 38.462 0.00 0.00 0.00 3.41
109 110 6.299141 TGCTGGGTTTTCTCTATAATGGATC 58.701 40.000 0.00 0.00 0.00 3.36
110 111 6.101734 TGCTGGGTTTTCTCTATAATGGATCT 59.898 38.462 0.00 0.00 0.00 2.75
111 112 7.292356 TGCTGGGTTTTCTCTATAATGGATCTA 59.708 37.037 0.00 0.00 0.00 1.98
112 113 7.821846 GCTGGGTTTTCTCTATAATGGATCTAG 59.178 40.741 0.00 0.00 0.00 2.43
113 114 9.094578 CTGGGTTTTCTCTATAATGGATCTAGA 57.905 37.037 0.00 0.00 0.00 2.43
114 115 9.094578 TGGGTTTTCTCTATAATGGATCTAGAG 57.905 37.037 8.86 8.86 39.78 2.43
115 116 9.095700 GGGTTTTCTCTATAATGGATCTAGAGT 57.904 37.037 12.99 0.00 39.54 3.24
126 127 9.717942 ATAATGGATCTAGAGTTACAATGAAGC 57.282 33.333 0.00 0.00 0.00 3.86
127 128 5.592054 TGGATCTAGAGTTACAATGAAGCG 58.408 41.667 0.00 0.00 0.00 4.68
128 129 4.985409 GGATCTAGAGTTACAATGAAGCGG 59.015 45.833 0.00 0.00 0.00 5.52
129 130 4.386867 TCTAGAGTTACAATGAAGCGGG 57.613 45.455 0.00 0.00 0.00 6.13
130 131 1.739067 AGAGTTACAATGAAGCGGGC 58.261 50.000 0.00 0.00 0.00 6.13
131 132 1.279271 AGAGTTACAATGAAGCGGGCT 59.721 47.619 0.00 0.00 0.00 5.19
132 133 2.500098 AGAGTTACAATGAAGCGGGCTA 59.500 45.455 0.00 0.00 0.00 3.93
133 134 3.134804 AGAGTTACAATGAAGCGGGCTAT 59.865 43.478 0.00 0.00 0.00 2.97
134 135 4.344102 AGAGTTACAATGAAGCGGGCTATA 59.656 41.667 0.00 0.00 0.00 1.31
135 136 4.377897 AGTTACAATGAAGCGGGCTATAC 58.622 43.478 0.00 0.00 0.00 1.47
136 137 4.101119 AGTTACAATGAAGCGGGCTATACT 59.899 41.667 0.00 0.00 0.00 2.12
137 138 5.303589 AGTTACAATGAAGCGGGCTATACTA 59.696 40.000 0.00 0.00 0.00 1.82
138 139 4.682778 ACAATGAAGCGGGCTATACTAA 57.317 40.909 0.00 0.00 0.00 2.24
139 140 5.031066 ACAATGAAGCGGGCTATACTAAA 57.969 39.130 0.00 0.00 0.00 1.85
140 141 4.814771 ACAATGAAGCGGGCTATACTAAAC 59.185 41.667 0.00 0.00 0.00 2.01
141 142 4.957684 ATGAAGCGGGCTATACTAAACT 57.042 40.909 0.00 0.00 0.00 2.66
142 143 6.183360 ACAATGAAGCGGGCTATACTAAACTA 60.183 38.462 0.00 0.00 0.00 2.24
143 144 5.857471 TGAAGCGGGCTATACTAAACTAA 57.143 39.130 0.00 0.00 0.00 2.24
144 145 6.224665 TGAAGCGGGCTATACTAAACTAAA 57.775 37.500 0.00 0.00 0.00 1.85
145 146 6.642430 TGAAGCGGGCTATACTAAACTAAAA 58.358 36.000 0.00 0.00 0.00 1.52
146 147 7.104939 TGAAGCGGGCTATACTAAACTAAAAA 58.895 34.615 0.00 0.00 0.00 1.94
169 170 9.541143 AAAAAGAATTCTTATCGCCAAAAAGAA 57.459 25.926 20.76 0.00 41.89 2.52
170 171 8.520835 AAAGAATTCTTATCGCCAAAAAGAAC 57.479 30.769 20.76 0.00 40.85 3.01
171 172 7.454260 AGAATTCTTATCGCCAAAAAGAACT 57.546 32.000 0.88 0.00 40.85 3.01
172 173 8.561738 AGAATTCTTATCGCCAAAAAGAACTA 57.438 30.769 0.88 0.00 40.85 2.24
173 174 9.010029 AGAATTCTTATCGCCAAAAAGAACTAA 57.990 29.630 0.88 0.00 40.85 2.24
174 175 9.620660 GAATTCTTATCGCCAAAAAGAACTAAA 57.379 29.630 0.00 0.00 40.85 1.85
175 176 9.974980 AATTCTTATCGCCAAAAAGAACTAAAA 57.025 25.926 0.00 0.00 40.85 1.52
176 177 9.626045 ATTCTTATCGCCAAAAAGAACTAAAAG 57.374 29.630 0.00 0.00 40.85 2.27
177 178 8.385898 TCTTATCGCCAAAAAGAACTAAAAGA 57.614 30.769 0.00 0.00 0.00 2.52
178 179 8.504005 TCTTATCGCCAAAAAGAACTAAAAGAG 58.496 33.333 0.00 0.00 0.00 2.85
179 180 6.877611 ATCGCCAAAAAGAACTAAAAGAGA 57.122 33.333 0.00 0.00 0.00 3.10
180 181 6.687081 TCGCCAAAAAGAACTAAAAGAGAA 57.313 33.333 0.00 0.00 0.00 2.87
181 182 7.272037 TCGCCAAAAAGAACTAAAAGAGAAT 57.728 32.000 0.00 0.00 0.00 2.40
182 183 7.712797 TCGCCAAAAAGAACTAAAAGAGAATT 58.287 30.769 0.00 0.00 0.00 2.17
183 184 7.860872 TCGCCAAAAAGAACTAAAAGAGAATTC 59.139 33.333 0.00 0.00 0.00 2.17
184 185 7.149128 CGCCAAAAAGAACTAAAAGAGAATTCG 60.149 37.037 0.00 0.00 0.00 3.34
185 186 7.114953 GCCAAAAAGAACTAAAAGAGAATTCGG 59.885 37.037 0.00 0.00 0.00 4.30
186 187 7.114953 CCAAAAAGAACTAAAAGAGAATTCGGC 59.885 37.037 0.00 0.00 0.00 5.54
187 188 6.877611 AAAGAACTAAAAGAGAATTCGGCA 57.122 33.333 0.00 0.00 0.00 5.69
188 189 7.454260 AAAGAACTAAAAGAGAATTCGGCAT 57.546 32.000 0.00 0.00 0.00 4.40
189 190 6.428385 AGAACTAAAAGAGAATTCGGCATG 57.572 37.500 0.00 0.00 0.00 4.06
190 191 6.173339 AGAACTAAAAGAGAATTCGGCATGA 58.827 36.000 0.00 0.00 0.00 3.07
191 192 6.655003 AGAACTAAAAGAGAATTCGGCATGAA 59.345 34.615 0.00 0.00 41.81 2.57
192 193 6.428385 ACTAAAAGAGAATTCGGCATGAAG 57.572 37.500 0.00 0.00 40.65 3.02
193 194 5.940470 ACTAAAAGAGAATTCGGCATGAAGT 59.060 36.000 0.00 0.00 40.65 3.01
194 195 7.103641 ACTAAAAGAGAATTCGGCATGAAGTA 58.896 34.615 0.00 0.00 40.65 2.24
195 196 5.803020 AAAGAGAATTCGGCATGAAGTAC 57.197 39.130 0.00 0.00 40.65 2.73
196 197 4.744795 AGAGAATTCGGCATGAAGTACT 57.255 40.909 0.00 0.00 40.65 2.73
197 198 5.091261 AGAGAATTCGGCATGAAGTACTT 57.909 39.130 8.13 8.13 40.65 2.24
198 199 4.872691 AGAGAATTCGGCATGAAGTACTTG 59.127 41.667 14.14 0.00 40.65 3.16
199 200 3.941483 AGAATTCGGCATGAAGTACTTGG 59.059 43.478 14.14 3.53 40.65 3.61
200 201 1.448985 TTCGGCATGAAGTACTTGGC 58.551 50.000 14.14 13.24 42.71 4.52
201 202 0.323302 TCGGCATGAAGTACTTGGCA 59.677 50.000 14.14 6.13 45.05 4.92
202 203 0.447801 CGGCATGAAGTACTTGGCAC 59.552 55.000 14.14 0.00 45.05 5.01
203 204 0.811281 GGCATGAAGTACTTGGCACC 59.189 55.000 14.14 5.74 44.50 5.01
204 205 1.533625 GCATGAAGTACTTGGCACCA 58.466 50.000 14.14 4.54 0.00 4.17
205 206 1.200020 GCATGAAGTACTTGGCACCAC 59.800 52.381 14.14 0.00 0.00 4.16
206 207 2.503331 CATGAAGTACTTGGCACCACA 58.497 47.619 14.14 2.97 0.00 4.17
207 208 2.949177 TGAAGTACTTGGCACCACAT 57.051 45.000 14.14 0.00 0.00 3.21
208 209 2.503331 TGAAGTACTTGGCACCACATG 58.497 47.619 14.14 0.00 0.00 3.21
209 210 1.812571 GAAGTACTTGGCACCACATGG 59.187 52.381 14.14 0.00 42.17 3.66
210 211 1.064003 AGTACTTGGCACCACATGGA 58.936 50.000 4.53 0.00 38.94 3.41
211 212 1.003580 AGTACTTGGCACCACATGGAG 59.996 52.381 4.53 0.00 38.94 3.86
212 213 1.003118 GTACTTGGCACCACATGGAGA 59.997 52.381 4.53 0.00 38.94 3.71
213 214 0.037303 ACTTGGCACCACATGGAGAG 59.963 55.000 4.53 0.00 38.94 3.20
214 215 0.679002 CTTGGCACCACATGGAGAGG 60.679 60.000 4.53 0.00 38.94 3.69
215 216 1.133181 TTGGCACCACATGGAGAGGA 61.133 55.000 4.53 0.00 38.94 3.71
216 217 1.222936 GGCACCACATGGAGAGGAG 59.777 63.158 4.53 0.00 38.94 3.69
217 218 1.557269 GGCACCACATGGAGAGGAGT 61.557 60.000 4.53 0.00 38.94 3.85
218 219 1.195115 GCACCACATGGAGAGGAGTA 58.805 55.000 4.53 0.00 38.94 2.59
219 220 1.137872 GCACCACATGGAGAGGAGTAG 59.862 57.143 4.53 0.00 38.94 2.57
220 221 2.461695 CACCACATGGAGAGGAGTAGT 58.538 52.381 4.53 0.00 38.94 2.73
221 222 2.834549 CACCACATGGAGAGGAGTAGTT 59.165 50.000 4.53 0.00 38.94 2.24
222 223 3.261897 CACCACATGGAGAGGAGTAGTTT 59.738 47.826 4.53 0.00 38.94 2.66
223 224 4.466370 CACCACATGGAGAGGAGTAGTTTA 59.534 45.833 4.53 0.00 38.94 2.01
224 225 5.129485 CACCACATGGAGAGGAGTAGTTTAT 59.871 44.000 4.53 0.00 38.94 1.40
225 226 6.323996 CACCACATGGAGAGGAGTAGTTTATA 59.676 42.308 4.53 0.00 38.94 0.98
226 227 6.551601 ACCACATGGAGAGGAGTAGTTTATAG 59.448 42.308 4.53 0.00 38.94 1.31
227 228 6.778069 CCACATGGAGAGGAGTAGTTTATAGA 59.222 42.308 0.00 0.00 37.39 1.98
228 229 7.453126 CCACATGGAGAGGAGTAGTTTATAGAT 59.547 40.741 0.00 0.00 37.39 1.98
229 230 8.303156 CACATGGAGAGGAGTAGTTTATAGATG 58.697 40.741 0.00 0.00 0.00 2.90
230 231 7.453126 ACATGGAGAGGAGTAGTTTATAGATGG 59.547 40.741 0.00 0.00 0.00 3.51
231 232 6.923670 TGGAGAGGAGTAGTTTATAGATGGT 58.076 40.000 0.00 0.00 0.00 3.55
232 233 6.778069 TGGAGAGGAGTAGTTTATAGATGGTG 59.222 42.308 0.00 0.00 0.00 4.17
233 234 7.005296 GGAGAGGAGTAGTTTATAGATGGTGA 58.995 42.308 0.00 0.00 0.00 4.02
234 235 7.175990 GGAGAGGAGTAGTTTATAGATGGTGAG 59.824 44.444 0.00 0.00 0.00 3.51
235 236 7.588169 AGAGGAGTAGTTTATAGATGGTGAGT 58.412 38.462 0.00 0.00 0.00 3.41
236 237 8.062536 AGAGGAGTAGTTTATAGATGGTGAGTT 58.937 37.037 0.00 0.00 0.00 3.01
237 238 8.012957 AGGAGTAGTTTATAGATGGTGAGTTG 57.987 38.462 0.00 0.00 0.00 3.16
238 239 7.620094 AGGAGTAGTTTATAGATGGTGAGTTGT 59.380 37.037 0.00 0.00 0.00 3.32
239 240 8.258708 GGAGTAGTTTATAGATGGTGAGTTGTT 58.741 37.037 0.00 0.00 0.00 2.83
240 241 9.654663 GAGTAGTTTATAGATGGTGAGTTGTTT 57.345 33.333 0.00 0.00 0.00 2.83
241 242 9.654663 AGTAGTTTATAGATGGTGAGTTGTTTC 57.345 33.333 0.00 0.00 0.00 2.78
242 243 9.654663 GTAGTTTATAGATGGTGAGTTGTTTCT 57.345 33.333 0.00 0.00 0.00 2.52
243 244 8.553459 AGTTTATAGATGGTGAGTTGTTTCTG 57.447 34.615 0.00 0.00 0.00 3.02
244 245 7.607991 AGTTTATAGATGGTGAGTTGTTTCTGG 59.392 37.037 0.00 0.00 0.00 3.86
245 246 3.146104 AGATGGTGAGTTGTTTCTGGG 57.854 47.619 0.00 0.00 0.00 4.45
246 247 2.711009 AGATGGTGAGTTGTTTCTGGGA 59.289 45.455 0.00 0.00 0.00 4.37
247 248 3.138283 AGATGGTGAGTTGTTTCTGGGAA 59.862 43.478 0.00 0.00 0.00 3.97
248 249 2.930950 TGGTGAGTTGTTTCTGGGAAG 58.069 47.619 0.00 0.00 0.00 3.46
249 250 2.507886 TGGTGAGTTGTTTCTGGGAAGA 59.492 45.455 0.00 0.00 0.00 2.87
250 251 3.142174 GGTGAGTTGTTTCTGGGAAGAG 58.858 50.000 0.00 0.00 0.00 2.85
251 252 3.433740 GGTGAGTTGTTTCTGGGAAGAGT 60.434 47.826 0.00 0.00 0.00 3.24
252 253 3.810386 GTGAGTTGTTTCTGGGAAGAGTC 59.190 47.826 0.00 0.00 0.00 3.36
253 254 3.454447 TGAGTTGTTTCTGGGAAGAGTCA 59.546 43.478 0.00 0.00 0.00 3.41
254 255 4.061596 GAGTTGTTTCTGGGAAGAGTCAG 58.938 47.826 0.00 0.00 0.00 3.51
255 256 2.550180 GTTGTTTCTGGGAAGAGTCAGC 59.450 50.000 0.00 0.00 0.00 4.26
256 257 2.050144 TGTTTCTGGGAAGAGTCAGCT 58.950 47.619 0.00 0.00 0.00 4.24
257 258 2.224378 TGTTTCTGGGAAGAGTCAGCTG 60.224 50.000 7.63 7.63 0.00 4.24
258 259 0.979665 TTCTGGGAAGAGTCAGCTGG 59.020 55.000 15.13 0.00 0.00 4.85
259 260 1.078567 CTGGGAAGAGTCAGCTGGC 60.079 63.158 11.28 11.28 0.00 4.85
260 261 2.270527 GGGAAGAGTCAGCTGGCC 59.729 66.667 16.31 6.70 0.00 5.36
261 262 2.125350 GGAAGAGTCAGCTGGCCG 60.125 66.667 16.31 0.00 0.00 6.13
262 263 2.650116 GGAAGAGTCAGCTGGCCGA 61.650 63.158 16.31 0.00 0.00 5.54
263 264 1.519719 GAAGAGTCAGCTGGCCGAT 59.480 57.895 16.31 0.00 0.00 4.18
264 265 0.107945 GAAGAGTCAGCTGGCCGATT 60.108 55.000 16.31 7.37 0.00 3.34
265 266 0.107945 AAGAGTCAGCTGGCCGATTC 60.108 55.000 16.31 5.88 0.00 2.52
266 267 0.975040 AGAGTCAGCTGGCCGATTCT 60.975 55.000 16.31 8.46 0.00 2.40
267 268 0.107945 GAGTCAGCTGGCCGATTCTT 60.108 55.000 16.31 0.00 0.00 2.52
268 269 0.326264 AGTCAGCTGGCCGATTCTTT 59.674 50.000 16.31 0.00 0.00 2.52
269 270 1.168714 GTCAGCTGGCCGATTCTTTT 58.831 50.000 15.13 0.00 0.00 2.27
270 271 1.135575 GTCAGCTGGCCGATTCTTTTG 60.136 52.381 15.13 0.00 0.00 2.44
271 272 0.171903 CAGCTGGCCGATTCTTTTGG 59.828 55.000 5.57 0.00 0.00 3.28
279 280 2.058057 CCGATTCTTTTGGCAAAACGG 58.942 47.619 27.07 27.07 0.00 4.44
280 281 2.544903 CCGATTCTTTTGGCAAAACGGT 60.545 45.455 29.47 16.85 34.39 4.83
281 282 2.724174 CGATTCTTTTGGCAAAACGGTC 59.276 45.455 20.81 15.91 0.00 4.79
282 283 3.712187 GATTCTTTTGGCAAAACGGTCA 58.288 40.909 20.81 0.36 0.00 4.02
283 284 3.594603 TTCTTTTGGCAAAACGGTCAA 57.405 38.095 20.81 6.72 0.00 3.18
284 285 3.810310 TCTTTTGGCAAAACGGTCAAT 57.190 38.095 20.81 0.00 31.56 2.57
285 286 3.452474 TCTTTTGGCAAAACGGTCAATG 58.548 40.909 20.81 9.28 31.56 2.82
286 287 2.969628 TTTGGCAAAACGGTCAATGT 57.030 40.000 10.83 0.00 31.56 2.71
287 288 2.969628 TTGGCAAAACGGTCAATGTT 57.030 40.000 0.00 0.00 0.00 2.71
288 289 4.386867 TTTGGCAAAACGGTCAATGTTA 57.613 36.364 10.83 0.00 31.56 2.41
289 290 4.386867 TTGGCAAAACGGTCAATGTTAA 57.613 36.364 0.00 0.00 0.00 2.01
290 291 4.592485 TGGCAAAACGGTCAATGTTAAT 57.408 36.364 0.00 0.00 0.00 1.40
291 292 5.707242 TGGCAAAACGGTCAATGTTAATA 57.293 34.783 0.00 0.00 0.00 0.98
292 293 6.274157 TGGCAAAACGGTCAATGTTAATAT 57.726 33.333 0.00 0.00 0.00 1.28
293 294 6.096036 TGGCAAAACGGTCAATGTTAATATG 58.904 36.000 0.00 0.00 0.00 1.78
294 295 6.096695 GGCAAAACGGTCAATGTTAATATGT 58.903 36.000 0.00 0.00 0.00 2.29
295 296 6.252655 GGCAAAACGGTCAATGTTAATATGTC 59.747 38.462 0.00 0.00 0.00 3.06
296 297 7.027161 GCAAAACGGTCAATGTTAATATGTCT 58.973 34.615 0.00 0.00 0.00 3.41
297 298 7.218204 GCAAAACGGTCAATGTTAATATGTCTC 59.782 37.037 0.00 0.00 0.00 3.36
298 299 8.450964 CAAAACGGTCAATGTTAATATGTCTCT 58.549 33.333 0.00 0.00 0.00 3.10
299 300 7.772332 AACGGTCAATGTTAATATGTCTCTC 57.228 36.000 0.00 0.00 0.00 3.20
300 301 5.977725 ACGGTCAATGTTAATATGTCTCTCG 59.022 40.000 0.00 0.00 0.00 4.04
301 302 5.107837 CGGTCAATGTTAATATGTCTCTCGC 60.108 44.000 0.00 0.00 0.00 5.03
302 303 5.753438 GGTCAATGTTAATATGTCTCTCGCA 59.247 40.000 0.00 0.00 0.00 5.10
303 304 6.257849 GGTCAATGTTAATATGTCTCTCGCAA 59.742 38.462 0.00 0.00 0.00 4.85
304 305 7.201609 GGTCAATGTTAATATGTCTCTCGCAAA 60.202 37.037 0.00 0.00 0.00 3.68
305 306 7.848051 GTCAATGTTAATATGTCTCTCGCAAAG 59.152 37.037 0.00 0.00 0.00 2.77
306 307 7.763985 TCAATGTTAATATGTCTCTCGCAAAGA 59.236 33.333 0.00 0.00 0.00 2.52
307 308 8.390354 CAATGTTAATATGTCTCTCGCAAAGAA 58.610 33.333 0.00 0.00 32.23 2.52
308 309 7.899178 TGTTAATATGTCTCTCGCAAAGAAA 57.101 32.000 0.00 0.00 32.23 2.52
309 310 8.317891 TGTTAATATGTCTCTCGCAAAGAAAA 57.682 30.769 0.00 0.00 32.23 2.29
310 311 8.779303 TGTTAATATGTCTCTCGCAAAGAAAAA 58.221 29.630 0.00 0.00 32.23 1.94
362 363 8.903570 TTCAAACTATATAAATTTGGCACACG 57.096 30.769 14.66 0.00 39.29 4.49
363 364 6.970043 TCAAACTATATAAATTTGGCACACGC 59.030 34.615 14.66 0.00 39.29 5.34
364 365 6.443934 AACTATATAAATTTGGCACACGCA 57.556 33.333 0.00 0.00 39.29 5.24
365 366 6.633500 ACTATATAAATTTGGCACACGCAT 57.367 33.333 0.00 0.00 39.29 4.73
366 367 7.737972 ACTATATAAATTTGGCACACGCATA 57.262 32.000 0.00 0.00 39.29 3.14
367 368 8.335532 ACTATATAAATTTGGCACACGCATAT 57.664 30.769 0.00 0.00 39.29 1.78
368 369 8.792633 ACTATATAAATTTGGCACACGCATATT 58.207 29.630 0.00 0.00 39.29 1.28
369 370 9.624697 CTATATAAATTTGGCACACGCATATTT 57.375 29.630 0.00 0.00 39.29 1.40
370 371 8.885494 ATATAAATTTGGCACACGCATATTTT 57.115 26.923 0.00 0.00 39.29 1.82
371 372 5.529014 AAATTTGGCACACGCATATTTTC 57.471 34.783 0.00 0.00 39.29 2.29
372 373 3.932545 TTTGGCACACGCATATTTTCT 57.067 38.095 0.00 0.00 39.29 2.52
373 374 3.485947 TTGGCACACGCATATTTTCTC 57.514 42.857 0.00 0.00 39.29 2.87
374 375 1.742831 TGGCACACGCATATTTTCTCC 59.257 47.619 0.00 0.00 41.24 3.71
375 376 1.742831 GGCACACGCATATTTTCTCCA 59.257 47.619 0.00 0.00 41.24 3.86
376 377 2.358898 GGCACACGCATATTTTCTCCAT 59.641 45.455 0.00 0.00 41.24 3.41
377 378 3.181487 GGCACACGCATATTTTCTCCATT 60.181 43.478 0.00 0.00 41.24 3.16
378 379 4.423732 GCACACGCATATTTTCTCCATTT 58.576 39.130 0.00 0.00 38.36 2.32
379 380 4.500477 GCACACGCATATTTTCTCCATTTC 59.500 41.667 0.00 0.00 38.36 2.17
380 381 5.036737 CACACGCATATTTTCTCCATTTCC 58.963 41.667 0.00 0.00 0.00 3.13
381 382 4.704540 ACACGCATATTTTCTCCATTTCCA 59.295 37.500 0.00 0.00 0.00 3.53
382 383 5.184864 ACACGCATATTTTCTCCATTTCCAA 59.815 36.000 0.00 0.00 0.00 3.53
383 384 6.127366 ACACGCATATTTTCTCCATTTCCAAT 60.127 34.615 0.00 0.00 0.00 3.16
384 385 6.757947 CACGCATATTTTCTCCATTTCCAATT 59.242 34.615 0.00 0.00 0.00 2.32
385 386 7.920151 CACGCATATTTTCTCCATTTCCAATTA 59.080 33.333 0.00 0.00 0.00 1.40
386 387 8.641541 ACGCATATTTTCTCCATTTCCAATTAT 58.358 29.630 0.00 0.00 0.00 1.28
387 388 9.480053 CGCATATTTTCTCCATTTCCAATTATT 57.520 29.630 0.00 0.00 0.00 1.40
393 394 9.844257 TTTTCTCCATTTCCAATTATTGTTTGT 57.156 25.926 4.15 0.00 0.00 2.83
394 395 9.844257 TTTCTCCATTTCCAATTATTGTTTGTT 57.156 25.926 4.15 0.00 0.00 2.83
395 396 8.830201 TCTCCATTTCCAATTATTGTTTGTTG 57.170 30.769 4.15 0.00 0.00 3.33
396 397 7.877097 TCTCCATTTCCAATTATTGTTTGTTGG 59.123 33.333 4.15 4.92 41.88 3.77
397 398 6.429385 TCCATTTCCAATTATTGTTTGTTGGC 59.571 34.615 4.15 0.00 40.64 4.52
398 399 6.206243 CCATTTCCAATTATTGTTTGTTGGCA 59.794 34.615 4.15 0.00 40.64 4.92
399 400 7.255381 CCATTTCCAATTATTGTTTGTTGGCAA 60.255 33.333 0.00 0.00 40.64 4.52
400 401 6.610741 TTCCAATTATTGTTTGTTGGCAAC 57.389 33.333 23.12 23.12 40.64 4.17
438 439 0.249911 GGGGCATGGTGTATCGAGAC 60.250 60.000 2.50 2.50 0.00 3.36
449 450 1.071107 GTATCGAGACACGCGAGAGAG 60.071 57.143 15.93 0.00 39.20 3.20
462 463 4.755629 ACGCGAGAGAGCAACTATATCTAA 59.244 41.667 15.93 0.00 36.85 2.10
473 474 7.603651 AGCAACTATATCTAAACTATCACCCG 58.396 38.462 0.00 0.00 0.00 5.28
479 480 9.268268 CTATATCTAAACTATCACCCGCAAAAA 57.732 33.333 0.00 0.00 0.00 1.94
513 520 5.935945 TCCAAACTAAGATGTCTTCAACCA 58.064 37.500 0.00 0.00 37.40 3.67
549 556 4.527564 GTTCAGTGTCAATCCAAAAGACG 58.472 43.478 0.00 0.00 35.09 4.18
573 580 7.498900 ACGAAAACTTATCTTATCATGGATGCA 59.501 33.333 0.00 0.00 0.00 3.96
577 584 8.484641 AACTTATCTTATCATGGATGCATACG 57.515 34.615 4.01 0.00 0.00 3.06
580 587 9.322773 CTTATCTTATCATGGATGCATACGAAT 57.677 33.333 4.01 0.14 0.00 3.34
595 602 0.179156 CGAATGCAAGATGGGCACAC 60.179 55.000 0.00 0.00 45.23 3.82
658 667 0.400594 AGGGGGTTCCTCTCAAAACG 59.599 55.000 0.00 0.00 44.06 3.60
659 668 0.399075 GGGGGTTCCTCTCAAAACGA 59.601 55.000 0.00 0.00 0.00 3.85
660 669 1.202842 GGGGGTTCCTCTCAAAACGAA 60.203 52.381 0.00 0.00 0.00 3.85
662 671 2.488153 GGGGTTCCTCTCAAAACGAATG 59.512 50.000 0.00 0.00 0.00 2.67
664 673 3.568430 GGGTTCCTCTCAAAACGAATGTT 59.432 43.478 0.00 0.00 40.98 2.71
711 736 1.189524 AAGGGTGTACACTAGCGCCA 61.190 55.000 24.55 0.00 37.02 5.69
715 740 1.203052 GGTGTACACTAGCGCCACTAA 59.797 52.381 24.55 0.00 35.49 2.24
716 741 2.257034 GTGTACACTAGCGCCACTAAC 58.743 52.381 18.92 0.00 0.00 2.34
717 742 2.094854 GTGTACACTAGCGCCACTAACT 60.095 50.000 18.92 0.00 0.00 2.24
718 743 2.094906 TGTACACTAGCGCCACTAACTG 60.095 50.000 2.29 0.00 0.00 3.16
720 745 1.616865 ACACTAGCGCCACTAACTGAA 59.383 47.619 2.29 0.00 0.00 3.02
750 788 1.402259 CTGTAGCGTGTACTCCTCCAG 59.598 57.143 0.00 0.00 0.00 3.86
751 789 0.100861 GTAGCGTGTACTCCTCCAGC 59.899 60.000 0.00 0.00 0.00 4.85
752 790 1.374343 TAGCGTGTACTCCTCCAGCG 61.374 60.000 0.00 0.00 0.00 5.18
753 791 2.991076 GCGTGTACTCCTCCAGCGT 61.991 63.158 0.00 0.00 0.00 5.07
756 794 0.739561 GTGTACTCCTCCAGCGTAGG 59.260 60.000 0.00 0.00 35.26 3.18
757 795 0.622136 TGTACTCCTCCAGCGTAGGA 59.378 55.000 4.90 4.90 40.92 2.94
758 796 1.214673 TGTACTCCTCCAGCGTAGGAT 59.785 52.381 5.36 0.71 42.25 3.24
759 797 2.440627 TGTACTCCTCCAGCGTAGGATA 59.559 50.000 5.36 0.00 42.25 2.59
760 798 2.279935 ACTCCTCCAGCGTAGGATAG 57.720 55.000 5.36 5.04 42.25 2.08
761 799 1.775459 ACTCCTCCAGCGTAGGATAGA 59.225 52.381 5.36 6.46 42.25 1.98
762 800 2.224670 ACTCCTCCAGCGTAGGATAGAG 60.225 54.545 16.66 16.66 42.25 2.43
763 801 1.074084 TCCTCCAGCGTAGGATAGAGG 59.926 57.143 8.61 8.61 38.24 3.69
764 802 1.074084 CCTCCAGCGTAGGATAGAGGA 59.926 57.143 9.19 0.00 42.93 3.71
765 803 2.432444 CTCCAGCGTAGGATAGAGGAG 58.568 57.143 0.00 0.00 36.99 3.69
766 804 1.074084 TCCAGCGTAGGATAGAGGAGG 59.926 57.143 0.00 0.00 31.23 4.30
767 805 1.540267 CAGCGTAGGATAGAGGAGGG 58.460 60.000 0.00 0.00 0.00 4.30
768 806 0.251430 AGCGTAGGATAGAGGAGGGC 60.251 60.000 0.00 0.00 0.00 5.19
769 807 0.251430 GCGTAGGATAGAGGAGGGCT 60.251 60.000 0.00 0.00 0.00 5.19
770 808 1.540267 CGTAGGATAGAGGAGGGCTG 58.460 60.000 0.00 0.00 0.00 4.85
771 809 1.888826 CGTAGGATAGAGGAGGGCTGG 60.889 61.905 0.00 0.00 0.00 4.85
772 810 1.429687 GTAGGATAGAGGAGGGCTGGA 59.570 57.143 0.00 0.00 0.00 3.86
773 811 0.486879 AGGATAGAGGAGGGCTGGAG 59.513 60.000 0.00 0.00 0.00 3.86
774 812 0.485099 GGATAGAGGAGGGCTGGAGA 59.515 60.000 0.00 0.00 0.00 3.71
775 813 1.549950 GGATAGAGGAGGGCTGGAGAG 60.550 61.905 0.00 0.00 0.00 3.20
819 857 4.032672 GGTCGTATATCCATCGAGACGTAG 59.967 50.000 0.00 0.00 34.33 3.51
821 859 3.931468 CGTATATCCATCGAGACGTAGGT 59.069 47.826 0.00 0.00 0.00 3.08
901 994 0.759346 CCGCTATATATGCCTCCCCC 59.241 60.000 0.00 0.00 0.00 5.40
917 1011 3.679738 CCGCACCGGCCACAAAAT 61.680 61.111 0.00 0.00 41.17 1.82
918 1012 2.126502 CGCACCGGCCACAAAATC 60.127 61.111 0.00 0.00 36.38 2.17
925 1019 1.989508 GGCCACAAAATCCCCCAGG 60.990 63.158 0.00 0.00 0.00 4.45
992 1129 1.837538 TTTCGTTTCTTGCGGCCGAG 61.838 55.000 33.48 19.44 0.00 4.63
994 1131 2.358247 GTTTCTTGCGGCCGAGGA 60.358 61.111 33.48 19.85 0.00 3.71
1054 1191 4.821589 CGAAGGAGGAGCGGGTGC 62.822 72.222 0.00 0.00 43.24 5.01
1143 1280 4.521062 GAGCGGCGCATCCTCTGT 62.521 66.667 35.02 10.67 27.95 3.41
1223 1360 1.096416 GTCACCGTCTACAGCTAGCT 58.904 55.000 12.68 12.68 0.00 3.32
1224 1361 1.064357 GTCACCGTCTACAGCTAGCTC 59.936 57.143 16.15 1.78 0.00 4.09
1280 1425 1.605058 ATCCACTAGCGTGCGGAGTT 61.605 55.000 0.00 0.00 39.86 3.01
1452 1642 3.567579 CTGTCAATGGTGGCGGGGT 62.568 63.158 0.00 0.00 31.59 4.95
1624 1911 4.084328 CCAGTGACTAGCGTTTCTCAAAAG 60.084 45.833 0.00 0.00 0.00 2.27
1681 1968 1.972872 CAAGGCTGTTCAACCTGAGT 58.027 50.000 0.00 0.00 36.07 3.41
1751 2047 4.744795 AAACAGTATAGCAGTAGCAGCT 57.255 40.909 0.00 0.00 45.49 4.24
1807 2103 1.434622 CTGCCACAGATCGATGGTGC 61.435 60.000 17.29 13.87 38.34 5.01
1836 2132 1.474332 CCACAGGTTTTGGCTGGCAT 61.474 55.000 4.22 0.00 0.00 4.40
1837 2133 0.320073 CACAGGTTTTGGCTGGCATG 60.320 55.000 4.22 2.23 0.00 4.06
1838 2134 1.375013 CAGGTTTTGGCTGGCATGC 60.375 57.895 9.90 9.90 0.00 4.06
1874 2170 4.196778 TCCCACAAGCCACGGCAA 62.197 61.111 11.35 0.00 44.88 4.52
1943 2245 3.908951 CGCGGGCAATCACGTACG 61.909 66.667 15.01 15.01 0.00 3.67
1944 2246 2.812178 GCGGGCAATCACGTACGT 60.812 61.111 16.72 16.72 0.00 3.57
1945 2247 3.077705 CGGGCAATCACGTACGTG 58.922 61.111 36.46 36.46 46.64 4.49
1946 2248 2.782615 GGGCAATCACGTACGTGC 59.217 61.111 37.13 27.17 45.04 5.34
1949 2251 2.394136 CAATCACGTACGTGCCGC 59.606 61.111 37.13 0.00 45.04 6.53
1950 2252 2.812178 AATCACGTACGTGCCGCC 60.812 61.111 37.13 0.00 45.04 6.13
1951 2253 3.291101 AATCACGTACGTGCCGCCT 62.291 57.895 37.13 19.16 45.04 5.52
1952 2254 2.775032 AATCACGTACGTGCCGCCTT 62.775 55.000 37.13 22.68 45.04 4.35
1965 2299 1.594833 CGCCTTGGTACACTAGCCA 59.405 57.895 0.00 0.00 39.29 4.75
1967 2301 0.902531 GCCTTGGTACACTAGCCAGA 59.097 55.000 0.00 0.00 39.29 3.86
2043 2411 5.221422 TGTCCATTAGTTGCCAAAAAGGAAG 60.221 40.000 0.00 0.00 41.22 3.46
2047 2415 6.369615 CCATTAGTTGCCAAAAAGGAAGATTG 59.630 38.462 0.00 0.00 41.22 2.67
2051 2428 4.864704 TGCCAAAAAGGAAGATTGGTAC 57.135 40.909 5.74 0.00 44.35 3.34
2060 2437 7.979786 AAAGGAAGATTGGTACTGATCTCTA 57.020 36.000 10.54 0.00 32.53 2.43
2105 2482 2.184385 GCAAGATGCGTTCAGGAATG 57.816 50.000 0.00 0.00 31.71 2.67
2108 2485 3.751621 CAAGATGCGTTCAGGAATGAAC 58.248 45.455 10.38 10.38 43.30 3.18
2123 2500 9.213777 TCAGGAATGAACTGTAGGATTATACTT 57.786 33.333 0.00 0.00 37.25 2.24
2137 2514 8.164057 AGGATTATACTTCAAAAGAGGAAGGT 57.836 34.615 7.04 0.00 44.69 3.50
2138 2515 8.615705 AGGATTATACTTCAAAAGAGGAAGGTT 58.384 33.333 7.04 0.00 44.69 3.50
2139 2516 9.901172 GGATTATACTTCAAAAGAGGAAGGTTA 57.099 33.333 7.04 0.00 44.69 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.603094 TCCACTGTCCTTCCTAGATACA 57.397 45.455 0.00 0.00 0.00 2.29
1 2 5.422650 AGTTTCCACTGTCCTTCCTAGATAC 59.577 44.000 0.00 0.00 0.00 2.24
2 3 5.590818 AGTTTCCACTGTCCTTCCTAGATA 58.409 41.667 0.00 0.00 0.00 1.98
3 4 4.430441 AGTTTCCACTGTCCTTCCTAGAT 58.570 43.478 0.00 0.00 0.00 1.98
4 5 3.858135 AGTTTCCACTGTCCTTCCTAGA 58.142 45.455 0.00 0.00 0.00 2.43
5 6 4.625607 AAGTTTCCACTGTCCTTCCTAG 57.374 45.455 0.00 0.00 31.60 3.02
6 7 5.367352 TGTAAAGTTTCCACTGTCCTTCCTA 59.633 40.000 0.00 0.00 31.60 2.94
7 8 3.953542 AAAGTTTCCACTGTCCTTCCT 57.046 42.857 0.00 0.00 31.60 3.36
8 9 4.457466 TGTAAAGTTTCCACTGTCCTTCC 58.543 43.478 0.00 0.00 31.60 3.46
9 10 5.763204 TCATGTAAAGTTTCCACTGTCCTTC 59.237 40.000 0.00 0.00 31.60 3.46
10 11 5.690865 TCATGTAAAGTTTCCACTGTCCTT 58.309 37.500 0.00 0.00 31.60 3.36
11 12 5.304686 TCATGTAAAGTTTCCACTGTCCT 57.695 39.130 0.00 0.00 31.60 3.85
12 13 6.575162 AATCATGTAAAGTTTCCACTGTCC 57.425 37.500 0.00 0.00 31.60 4.02
13 14 9.394477 GTTTAATCATGTAAAGTTTCCACTGTC 57.606 33.333 0.00 0.00 31.60 3.51
14 15 8.357402 GGTTTAATCATGTAAAGTTTCCACTGT 58.643 33.333 0.00 0.00 31.60 3.55
15 16 7.537306 CGGTTTAATCATGTAAAGTTTCCACTG 59.463 37.037 0.00 0.00 31.60 3.66
16 17 7.229907 ACGGTTTAATCATGTAAAGTTTCCACT 59.770 33.333 0.00 0.00 33.11 4.00
17 18 7.325097 CACGGTTTAATCATGTAAAGTTTCCAC 59.675 37.037 0.00 0.00 0.00 4.02
18 19 7.364200 CACGGTTTAATCATGTAAAGTTTCCA 58.636 34.615 0.00 0.00 0.00 3.53
19 20 6.804783 CCACGGTTTAATCATGTAAAGTTTCC 59.195 38.462 0.00 0.00 0.00 3.13
20 21 7.586747 TCCACGGTTTAATCATGTAAAGTTTC 58.413 34.615 0.00 0.00 0.00 2.78
21 22 7.308951 CCTCCACGGTTTAATCATGTAAAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
22 23 6.150474 CCTCCACGGTTTAATCATGTAAAGTT 59.850 38.462 0.00 0.00 0.00 2.66
23 24 5.646360 CCTCCACGGTTTAATCATGTAAAGT 59.354 40.000 0.00 0.00 0.00 2.66
24 25 5.448632 GCCTCCACGGTTTAATCATGTAAAG 60.449 44.000 0.00 0.00 34.25 1.85
25 26 4.396790 GCCTCCACGGTTTAATCATGTAAA 59.603 41.667 0.00 0.00 34.25 2.01
26 27 3.942748 GCCTCCACGGTTTAATCATGTAA 59.057 43.478 0.00 0.00 34.25 2.41
27 28 3.199071 AGCCTCCACGGTTTAATCATGTA 59.801 43.478 0.00 0.00 34.25 2.29
28 29 2.026262 AGCCTCCACGGTTTAATCATGT 60.026 45.455 0.00 0.00 34.25 3.21
29 30 2.643551 AGCCTCCACGGTTTAATCATG 58.356 47.619 0.00 0.00 34.25 3.07
30 31 4.706842 ATAGCCTCCACGGTTTAATCAT 57.293 40.909 0.00 0.00 34.25 2.45
31 32 4.497291 AATAGCCTCCACGGTTTAATCA 57.503 40.909 0.00 0.00 34.25 2.57
32 33 4.025145 CGAAATAGCCTCCACGGTTTAATC 60.025 45.833 0.00 0.00 34.25 1.75
33 34 3.875134 CGAAATAGCCTCCACGGTTTAAT 59.125 43.478 0.00 0.00 34.25 1.40
34 35 3.055963 TCGAAATAGCCTCCACGGTTTAA 60.056 43.478 0.00 0.00 34.25 1.52
35 36 2.496871 TCGAAATAGCCTCCACGGTTTA 59.503 45.455 0.00 0.00 34.25 2.01
36 37 1.276989 TCGAAATAGCCTCCACGGTTT 59.723 47.619 0.00 0.00 34.25 3.27
37 38 0.899720 TCGAAATAGCCTCCACGGTT 59.100 50.000 0.00 0.00 34.25 4.44
38 39 0.460311 CTCGAAATAGCCTCCACGGT 59.540 55.000 0.00 0.00 34.25 4.83
39 40 0.249489 CCTCGAAATAGCCTCCACGG 60.249 60.000 0.00 0.00 0.00 4.94
40 41 0.744874 TCCTCGAAATAGCCTCCACG 59.255 55.000 0.00 0.00 0.00 4.94
41 42 2.981859 TTCCTCGAAATAGCCTCCAC 57.018 50.000 0.00 0.00 0.00 4.02
42 43 3.992943 TTTTCCTCGAAATAGCCTCCA 57.007 42.857 0.00 0.00 31.34 3.86
61 62 7.255625 GCAGTCTCCATTAAACTTCCTCTTTTT 60.256 37.037 0.00 0.00 0.00 1.94
62 63 6.207614 GCAGTCTCCATTAAACTTCCTCTTTT 59.792 38.462 0.00 0.00 0.00 2.27
63 64 5.707764 GCAGTCTCCATTAAACTTCCTCTTT 59.292 40.000 0.00 0.00 0.00 2.52
64 65 5.013599 AGCAGTCTCCATTAAACTTCCTCTT 59.986 40.000 0.00 0.00 0.00 2.85
65 66 4.534103 AGCAGTCTCCATTAAACTTCCTCT 59.466 41.667 0.00 0.00 0.00 3.69
66 67 4.633565 CAGCAGTCTCCATTAAACTTCCTC 59.366 45.833 0.00 0.00 0.00 3.71
67 68 4.566488 CCAGCAGTCTCCATTAAACTTCCT 60.566 45.833 0.00 0.00 0.00 3.36
68 69 3.691609 CCAGCAGTCTCCATTAAACTTCC 59.308 47.826 0.00 0.00 0.00 3.46
69 70 3.691609 CCCAGCAGTCTCCATTAAACTTC 59.308 47.826 0.00 0.00 0.00 3.01
70 71 3.074538 ACCCAGCAGTCTCCATTAAACTT 59.925 43.478 0.00 0.00 0.00 2.66
71 72 2.644798 ACCCAGCAGTCTCCATTAAACT 59.355 45.455 0.00 0.00 0.00 2.66
72 73 3.073274 ACCCAGCAGTCTCCATTAAAC 57.927 47.619 0.00 0.00 0.00 2.01
73 74 3.806949 AACCCAGCAGTCTCCATTAAA 57.193 42.857 0.00 0.00 0.00 1.52
74 75 3.806949 AAACCCAGCAGTCTCCATTAA 57.193 42.857 0.00 0.00 0.00 1.40
75 76 3.330701 AGAAAACCCAGCAGTCTCCATTA 59.669 43.478 0.00 0.00 0.00 1.90
76 77 2.108952 AGAAAACCCAGCAGTCTCCATT 59.891 45.455 0.00 0.00 0.00 3.16
77 78 1.707427 AGAAAACCCAGCAGTCTCCAT 59.293 47.619 0.00 0.00 0.00 3.41
78 79 1.072331 GAGAAAACCCAGCAGTCTCCA 59.928 52.381 0.00 0.00 30.60 3.86
79 80 1.349357 AGAGAAAACCCAGCAGTCTCC 59.651 52.381 0.00 0.00 36.24 3.71
80 81 2.849294 AGAGAAAACCCAGCAGTCTC 57.151 50.000 0.00 0.00 35.91 3.36
81 82 6.352516 CATTATAGAGAAAACCCAGCAGTCT 58.647 40.000 0.00 0.00 0.00 3.24
82 83 5.529060 CCATTATAGAGAAAACCCAGCAGTC 59.471 44.000 0.00 0.00 0.00 3.51
83 84 5.191722 TCCATTATAGAGAAAACCCAGCAGT 59.808 40.000 0.00 0.00 0.00 4.40
84 85 5.684704 TCCATTATAGAGAAAACCCAGCAG 58.315 41.667 0.00 0.00 0.00 4.24
85 86 5.708736 TCCATTATAGAGAAAACCCAGCA 57.291 39.130 0.00 0.00 0.00 4.41
86 87 6.538263 AGATCCATTATAGAGAAAACCCAGC 58.462 40.000 0.00 0.00 0.00 4.85
87 88 9.094578 TCTAGATCCATTATAGAGAAAACCCAG 57.905 37.037 0.00 0.00 0.00 4.45
88 89 9.094578 CTCTAGATCCATTATAGAGAAAACCCA 57.905 37.037 9.35 0.00 43.40 4.51
89 90 9.095700 ACTCTAGATCCATTATAGAGAAAACCC 57.904 37.037 18.10 0.00 43.40 4.11
100 101 9.717942 GCTTCATTGTAACTCTAGATCCATTAT 57.282 33.333 0.00 0.00 0.00 1.28
101 102 7.867909 CGCTTCATTGTAACTCTAGATCCATTA 59.132 37.037 0.00 0.00 0.00 1.90
102 103 6.703607 CGCTTCATTGTAACTCTAGATCCATT 59.296 38.462 0.00 0.00 0.00 3.16
103 104 6.219473 CGCTTCATTGTAACTCTAGATCCAT 58.781 40.000 0.00 0.00 0.00 3.41
104 105 5.451937 CCGCTTCATTGTAACTCTAGATCCA 60.452 44.000 0.00 0.00 0.00 3.41
105 106 4.985409 CCGCTTCATTGTAACTCTAGATCC 59.015 45.833 0.00 0.00 0.00 3.36
106 107 4.985409 CCCGCTTCATTGTAACTCTAGATC 59.015 45.833 0.00 0.00 0.00 2.75
107 108 4.740934 GCCCGCTTCATTGTAACTCTAGAT 60.741 45.833 0.00 0.00 0.00 1.98
108 109 3.430374 GCCCGCTTCATTGTAACTCTAGA 60.430 47.826 0.00 0.00 0.00 2.43
109 110 2.866762 GCCCGCTTCATTGTAACTCTAG 59.133 50.000 0.00 0.00 0.00 2.43
110 111 2.500098 AGCCCGCTTCATTGTAACTCTA 59.500 45.455 0.00 0.00 0.00 2.43
111 112 1.279271 AGCCCGCTTCATTGTAACTCT 59.721 47.619 0.00 0.00 0.00 3.24
112 113 1.739067 AGCCCGCTTCATTGTAACTC 58.261 50.000 0.00 0.00 0.00 3.01
113 114 3.560636 ATAGCCCGCTTCATTGTAACT 57.439 42.857 0.00 0.00 0.00 2.24
114 115 4.377897 AGTATAGCCCGCTTCATTGTAAC 58.622 43.478 0.00 0.00 0.00 2.50
115 116 4.682778 AGTATAGCCCGCTTCATTGTAA 57.317 40.909 0.00 0.00 0.00 2.41
116 117 5.794726 TTAGTATAGCCCGCTTCATTGTA 57.205 39.130 0.00 0.00 0.00 2.41
117 118 4.682778 TTAGTATAGCCCGCTTCATTGT 57.317 40.909 0.00 0.00 0.00 2.71
118 119 5.057149 AGTTTAGTATAGCCCGCTTCATTG 58.943 41.667 0.00 0.00 0.00 2.82
119 120 5.291905 AGTTTAGTATAGCCCGCTTCATT 57.708 39.130 0.00 0.00 0.00 2.57
120 121 4.957684 AGTTTAGTATAGCCCGCTTCAT 57.042 40.909 0.00 0.00 0.00 2.57
121 122 5.857471 TTAGTTTAGTATAGCCCGCTTCA 57.143 39.130 0.00 0.00 0.00 3.02
122 123 7.543947 TTTTTAGTTTAGTATAGCCCGCTTC 57.456 36.000 0.00 0.00 0.00 3.86
143 144 9.541143 TTCTTTTTGGCGATAAGAATTCTTTTT 57.459 25.926 25.02 13.58 37.40 1.94
144 145 8.978539 GTTCTTTTTGGCGATAAGAATTCTTTT 58.021 29.630 25.02 17.61 39.34 2.27
145 146 8.360390 AGTTCTTTTTGGCGATAAGAATTCTTT 58.640 29.630 25.02 13.18 39.34 2.52
146 147 7.886338 AGTTCTTTTTGGCGATAAGAATTCTT 58.114 30.769 23.53 23.53 39.34 2.52
147 148 7.454260 AGTTCTTTTTGGCGATAAGAATTCT 57.546 32.000 19.14 0.88 39.34 2.40
148 149 9.620660 TTTAGTTCTTTTTGGCGATAAGAATTC 57.379 29.630 19.14 10.38 39.34 2.17
149 150 9.974980 TTTTAGTTCTTTTTGGCGATAAGAATT 57.025 25.926 19.14 17.50 39.34 2.17
150 151 9.626045 CTTTTAGTTCTTTTTGGCGATAAGAAT 57.374 29.630 19.14 12.51 39.34 2.40
151 152 8.842280 TCTTTTAGTTCTTTTTGGCGATAAGAA 58.158 29.630 14.16 14.16 36.00 2.52
152 153 8.385898 TCTTTTAGTTCTTTTTGGCGATAAGA 57.614 30.769 3.78 3.78 0.00 2.10
153 154 8.504005 TCTCTTTTAGTTCTTTTTGGCGATAAG 58.496 33.333 0.00 0.00 0.00 1.73
154 155 8.385898 TCTCTTTTAGTTCTTTTTGGCGATAA 57.614 30.769 0.00 0.00 0.00 1.75
155 156 7.972832 TCTCTTTTAGTTCTTTTTGGCGATA 57.027 32.000 0.00 0.00 0.00 2.92
156 157 6.877611 TCTCTTTTAGTTCTTTTTGGCGAT 57.122 33.333 0.00 0.00 0.00 4.58
157 158 6.687081 TTCTCTTTTAGTTCTTTTTGGCGA 57.313 33.333 0.00 0.00 0.00 5.54
158 159 7.149128 CGAATTCTCTTTTAGTTCTTTTTGGCG 60.149 37.037 3.52 0.00 0.00 5.69
159 160 7.114953 CCGAATTCTCTTTTAGTTCTTTTTGGC 59.885 37.037 3.52 0.00 0.00 4.52
160 161 7.114953 GCCGAATTCTCTTTTAGTTCTTTTTGG 59.885 37.037 3.52 0.00 0.00 3.28
161 162 7.647715 TGCCGAATTCTCTTTTAGTTCTTTTTG 59.352 33.333 3.52 0.00 0.00 2.44
162 163 7.712797 TGCCGAATTCTCTTTTAGTTCTTTTT 58.287 30.769 3.52 0.00 0.00 1.94
163 164 7.272037 TGCCGAATTCTCTTTTAGTTCTTTT 57.728 32.000 3.52 0.00 0.00 2.27
164 165 6.877611 TGCCGAATTCTCTTTTAGTTCTTT 57.122 33.333 3.52 0.00 0.00 2.52
165 166 6.655003 TCATGCCGAATTCTCTTTTAGTTCTT 59.345 34.615 3.52 0.00 0.00 2.52
166 167 6.173339 TCATGCCGAATTCTCTTTTAGTTCT 58.827 36.000 3.52 0.00 0.00 3.01
167 168 6.422776 TCATGCCGAATTCTCTTTTAGTTC 57.577 37.500 3.52 0.00 0.00 3.01
168 169 6.431234 ACTTCATGCCGAATTCTCTTTTAGTT 59.569 34.615 3.52 0.00 31.69 2.24
169 170 5.940470 ACTTCATGCCGAATTCTCTTTTAGT 59.060 36.000 3.52 0.00 31.69 2.24
170 171 6.428385 ACTTCATGCCGAATTCTCTTTTAG 57.572 37.500 3.52 0.00 31.69 1.85
171 172 7.103641 AGTACTTCATGCCGAATTCTCTTTTA 58.896 34.615 3.52 0.00 31.69 1.52
172 173 5.940470 AGTACTTCATGCCGAATTCTCTTTT 59.060 36.000 3.52 0.00 31.69 2.27
173 174 5.491982 AGTACTTCATGCCGAATTCTCTTT 58.508 37.500 3.52 0.00 31.69 2.52
174 175 5.091261 AGTACTTCATGCCGAATTCTCTT 57.909 39.130 3.52 0.00 31.69 2.85
175 176 4.744795 AGTACTTCATGCCGAATTCTCT 57.255 40.909 3.52 0.00 31.69 3.10
176 177 4.034510 CCAAGTACTTCATGCCGAATTCTC 59.965 45.833 4.77 0.00 31.69 2.87
177 178 3.941483 CCAAGTACTTCATGCCGAATTCT 59.059 43.478 4.77 0.00 31.69 2.40
178 179 3.487544 GCCAAGTACTTCATGCCGAATTC 60.488 47.826 4.77 0.00 31.69 2.17
179 180 2.423538 GCCAAGTACTTCATGCCGAATT 59.576 45.455 4.77 0.00 31.69 2.17
180 181 2.017049 GCCAAGTACTTCATGCCGAAT 58.983 47.619 4.77 0.00 31.69 3.34
181 182 1.271108 TGCCAAGTACTTCATGCCGAA 60.271 47.619 4.77 0.00 0.00 4.30
182 183 0.323302 TGCCAAGTACTTCATGCCGA 59.677 50.000 4.77 0.00 0.00 5.54
183 184 0.447801 GTGCCAAGTACTTCATGCCG 59.552 55.000 4.77 0.00 0.00 5.69
184 185 0.811281 GGTGCCAAGTACTTCATGCC 59.189 55.000 4.77 2.78 0.00 4.40
185 186 1.200020 GTGGTGCCAAGTACTTCATGC 59.800 52.381 4.77 9.51 0.00 4.06
186 187 2.503331 TGTGGTGCCAAGTACTTCATG 58.497 47.619 4.77 0.00 0.00 3.07
187 188 2.949177 TGTGGTGCCAAGTACTTCAT 57.051 45.000 4.77 0.00 0.00 2.57
188 189 2.503331 CATGTGGTGCCAAGTACTTCA 58.497 47.619 4.77 0.00 0.00 3.02
189 190 1.812571 CCATGTGGTGCCAAGTACTTC 59.187 52.381 4.77 0.00 0.00 3.01
190 191 1.423541 TCCATGTGGTGCCAAGTACTT 59.576 47.619 1.12 1.12 36.34 2.24
191 192 1.003580 CTCCATGTGGTGCCAAGTACT 59.996 52.381 0.00 0.00 36.34 2.73
192 193 1.003118 TCTCCATGTGGTGCCAAGTAC 59.997 52.381 0.00 0.00 36.34 2.73
193 194 1.278985 CTCTCCATGTGGTGCCAAGTA 59.721 52.381 0.00 0.00 36.34 2.24
194 195 0.037303 CTCTCCATGTGGTGCCAAGT 59.963 55.000 0.00 0.00 36.34 3.16
195 196 0.679002 CCTCTCCATGTGGTGCCAAG 60.679 60.000 0.00 0.00 36.34 3.61
196 197 1.133181 TCCTCTCCATGTGGTGCCAA 61.133 55.000 0.00 0.00 36.34 4.52
197 198 1.538629 TCCTCTCCATGTGGTGCCA 60.539 57.895 0.00 0.00 36.34 4.92
198 199 1.222936 CTCCTCTCCATGTGGTGCC 59.777 63.158 0.00 0.00 36.34 5.01
199 200 1.137872 CTACTCCTCTCCATGTGGTGC 59.862 57.143 0.00 0.00 36.34 5.01
200 201 2.461695 ACTACTCCTCTCCATGTGGTG 58.538 52.381 0.00 0.00 36.34 4.17
201 202 2.930109 ACTACTCCTCTCCATGTGGT 57.070 50.000 0.00 0.00 36.34 4.16
202 203 5.878406 ATAAACTACTCCTCTCCATGTGG 57.122 43.478 0.00 0.00 0.00 4.17
203 204 7.825331 TCTATAAACTACTCCTCTCCATGTG 57.175 40.000 0.00 0.00 0.00 3.21
204 205 7.453126 CCATCTATAAACTACTCCTCTCCATGT 59.547 40.741 0.00 0.00 0.00 3.21
205 206 7.453126 ACCATCTATAAACTACTCCTCTCCATG 59.547 40.741 0.00 0.00 0.00 3.66
206 207 7.453126 CACCATCTATAAACTACTCCTCTCCAT 59.547 40.741 0.00 0.00 0.00 3.41
207 208 6.778069 CACCATCTATAAACTACTCCTCTCCA 59.222 42.308 0.00 0.00 0.00 3.86
208 209 7.005296 TCACCATCTATAAACTACTCCTCTCC 58.995 42.308 0.00 0.00 0.00 3.71
209 210 7.722285 ACTCACCATCTATAAACTACTCCTCTC 59.278 40.741 0.00 0.00 0.00 3.20
210 211 7.588169 ACTCACCATCTATAAACTACTCCTCT 58.412 38.462 0.00 0.00 0.00 3.69
211 212 7.826918 ACTCACCATCTATAAACTACTCCTC 57.173 40.000 0.00 0.00 0.00 3.71
212 213 7.620094 ACAACTCACCATCTATAAACTACTCCT 59.380 37.037 0.00 0.00 0.00 3.69
213 214 7.783042 ACAACTCACCATCTATAAACTACTCC 58.217 38.462 0.00 0.00 0.00 3.85
214 215 9.654663 AAACAACTCACCATCTATAAACTACTC 57.345 33.333 0.00 0.00 0.00 2.59
215 216 9.654663 GAAACAACTCACCATCTATAAACTACT 57.345 33.333 0.00 0.00 0.00 2.57
216 217 9.654663 AGAAACAACTCACCATCTATAAACTAC 57.345 33.333 0.00 0.00 0.00 2.73
217 218 9.653287 CAGAAACAACTCACCATCTATAAACTA 57.347 33.333 0.00 0.00 0.00 2.24
218 219 7.607991 CCAGAAACAACTCACCATCTATAAACT 59.392 37.037 0.00 0.00 0.00 2.66
219 220 7.148239 CCCAGAAACAACTCACCATCTATAAAC 60.148 40.741 0.00 0.00 0.00 2.01
220 221 6.884295 CCCAGAAACAACTCACCATCTATAAA 59.116 38.462 0.00 0.00 0.00 1.40
221 222 6.214615 TCCCAGAAACAACTCACCATCTATAA 59.785 38.462 0.00 0.00 0.00 0.98
222 223 5.724370 TCCCAGAAACAACTCACCATCTATA 59.276 40.000 0.00 0.00 0.00 1.31
223 224 4.536090 TCCCAGAAACAACTCACCATCTAT 59.464 41.667 0.00 0.00 0.00 1.98
224 225 3.907474 TCCCAGAAACAACTCACCATCTA 59.093 43.478 0.00 0.00 0.00 1.98
225 226 2.711009 TCCCAGAAACAACTCACCATCT 59.289 45.455 0.00 0.00 0.00 2.90
226 227 3.140325 TCCCAGAAACAACTCACCATC 57.860 47.619 0.00 0.00 0.00 3.51
227 228 3.138283 TCTTCCCAGAAACAACTCACCAT 59.862 43.478 0.00 0.00 0.00 3.55
228 229 2.507886 TCTTCCCAGAAACAACTCACCA 59.492 45.455 0.00 0.00 0.00 4.17
229 230 3.142174 CTCTTCCCAGAAACAACTCACC 58.858 50.000 0.00 0.00 0.00 4.02
230 231 3.809905 ACTCTTCCCAGAAACAACTCAC 58.190 45.455 0.00 0.00 0.00 3.51
231 232 3.454447 TGACTCTTCCCAGAAACAACTCA 59.546 43.478 0.00 0.00 0.00 3.41
232 233 4.061596 CTGACTCTTCCCAGAAACAACTC 58.938 47.826 0.00 0.00 32.37 3.01
233 234 3.745797 GCTGACTCTTCCCAGAAACAACT 60.746 47.826 0.00 0.00 32.37 3.16
234 235 2.550180 GCTGACTCTTCCCAGAAACAAC 59.450 50.000 0.00 0.00 32.37 3.32
235 236 2.439507 AGCTGACTCTTCCCAGAAACAA 59.560 45.455 0.00 0.00 32.37 2.83
236 237 2.050144 AGCTGACTCTTCCCAGAAACA 58.950 47.619 0.00 0.00 32.37 2.83
237 238 2.421619 CAGCTGACTCTTCCCAGAAAC 58.578 52.381 8.42 0.00 32.37 2.78
238 239 1.349026 CCAGCTGACTCTTCCCAGAAA 59.651 52.381 17.39 0.00 32.37 2.52
239 240 0.979665 CCAGCTGACTCTTCCCAGAA 59.020 55.000 17.39 0.00 32.37 3.02
240 241 1.548357 GCCAGCTGACTCTTCCCAGA 61.548 60.000 17.39 0.00 32.37 3.86
241 242 1.078567 GCCAGCTGACTCTTCCCAG 60.079 63.158 17.39 0.00 0.00 4.45
242 243 2.596851 GGCCAGCTGACTCTTCCCA 61.597 63.158 17.39 0.00 0.00 4.37
243 244 2.270527 GGCCAGCTGACTCTTCCC 59.729 66.667 17.39 0.00 0.00 3.97
244 245 1.965754 ATCGGCCAGCTGACTCTTCC 61.966 60.000 17.39 5.25 33.73 3.46
245 246 0.107945 AATCGGCCAGCTGACTCTTC 60.108 55.000 17.39 0.00 33.73 2.87
246 247 0.107945 GAATCGGCCAGCTGACTCTT 60.108 55.000 17.39 1.59 33.73 2.85
247 248 0.975040 AGAATCGGCCAGCTGACTCT 60.975 55.000 17.39 6.62 33.65 3.24
248 249 0.107945 AAGAATCGGCCAGCTGACTC 60.108 55.000 17.39 2.14 33.73 3.36
249 250 0.326264 AAAGAATCGGCCAGCTGACT 59.674 50.000 17.39 0.00 33.73 3.41
250 251 1.135575 CAAAAGAATCGGCCAGCTGAC 60.136 52.381 17.39 2.25 33.73 3.51
251 252 1.167851 CAAAAGAATCGGCCAGCTGA 58.832 50.000 17.39 3.16 35.60 4.26
252 253 0.171903 CCAAAAGAATCGGCCAGCTG 59.828 55.000 6.78 6.78 0.00 4.24
253 254 1.598701 GCCAAAAGAATCGGCCAGCT 61.599 55.000 2.24 0.00 40.07 4.24
254 255 1.153765 GCCAAAAGAATCGGCCAGC 60.154 57.895 2.24 0.00 40.07 4.85
255 256 0.602562 TTGCCAAAAGAATCGGCCAG 59.397 50.000 2.24 0.00 45.63 4.85
256 257 1.043816 TTTGCCAAAAGAATCGGCCA 58.956 45.000 2.24 0.00 45.63 5.36
257 258 1.798223 GTTTTGCCAAAAGAATCGGCC 59.202 47.619 2.15 0.00 45.63 6.13
258 259 1.455408 CGTTTTGCCAAAAGAATCGGC 59.545 47.619 2.15 0.00 46.43 5.54
259 260 2.058057 CCGTTTTGCCAAAAGAATCGG 58.942 47.619 13.14 13.14 0.00 4.18
260 261 2.724174 GACCGTTTTGCCAAAAGAATCG 59.276 45.455 2.15 3.43 0.00 3.34
261 262 3.712187 TGACCGTTTTGCCAAAAGAATC 58.288 40.909 2.15 2.05 0.00 2.52
262 263 3.810310 TGACCGTTTTGCCAAAAGAAT 57.190 38.095 2.15 0.00 0.00 2.40
263 264 3.594603 TTGACCGTTTTGCCAAAAGAA 57.405 38.095 2.15 0.00 0.00 2.52
264 265 3.118956 ACATTGACCGTTTTGCCAAAAGA 60.119 39.130 2.15 0.00 0.00 2.52
265 266 3.194062 ACATTGACCGTTTTGCCAAAAG 58.806 40.909 2.15 0.00 0.00 2.27
266 267 3.252974 ACATTGACCGTTTTGCCAAAA 57.747 38.095 0.00 0.00 0.00 2.44
267 268 2.969628 ACATTGACCGTTTTGCCAAA 57.030 40.000 0.00 0.00 0.00 3.28
268 269 2.969628 AACATTGACCGTTTTGCCAA 57.030 40.000 0.00 0.00 0.00 4.52
269 270 4.592485 ATTAACATTGACCGTTTTGCCA 57.408 36.364 0.00 0.00 0.00 4.92
270 271 6.096695 ACATATTAACATTGACCGTTTTGCC 58.903 36.000 0.00 0.00 0.00 4.52
271 272 7.027161 AGACATATTAACATTGACCGTTTTGC 58.973 34.615 0.00 0.00 0.00 3.68
272 273 8.450964 AGAGACATATTAACATTGACCGTTTTG 58.549 33.333 0.00 0.00 0.00 2.44
273 274 8.561738 AGAGACATATTAACATTGACCGTTTT 57.438 30.769 0.00 0.00 0.00 2.43
274 275 7.010183 CGAGAGACATATTAACATTGACCGTTT 59.990 37.037 0.00 0.00 0.00 3.60
275 276 6.475727 CGAGAGACATATTAACATTGACCGTT 59.524 38.462 0.00 0.00 0.00 4.44
276 277 5.977725 CGAGAGACATATTAACATTGACCGT 59.022 40.000 0.00 0.00 0.00 4.83
277 278 5.107837 GCGAGAGACATATTAACATTGACCG 60.108 44.000 0.00 0.00 0.00 4.79
278 279 5.753438 TGCGAGAGACATATTAACATTGACC 59.247 40.000 0.00 0.00 0.00 4.02
279 280 6.828502 TGCGAGAGACATATTAACATTGAC 57.171 37.500 0.00 0.00 0.00 3.18
280 281 7.763985 TCTTTGCGAGAGACATATTAACATTGA 59.236 33.333 0.00 0.00 0.00 2.57
281 282 7.909267 TCTTTGCGAGAGACATATTAACATTG 58.091 34.615 0.00 0.00 0.00 2.82
282 283 8.492673 TTCTTTGCGAGAGACATATTAACATT 57.507 30.769 0.00 0.00 35.37 2.71
283 284 8.492673 TTTCTTTGCGAGAGACATATTAACAT 57.507 30.769 0.00 0.00 35.37 2.71
284 285 7.899178 TTTCTTTGCGAGAGACATATTAACA 57.101 32.000 0.00 0.00 35.37 2.41
336 337 9.347934 CGTGTGCCAAATTTATATAGTTTGAAA 57.652 29.630 17.53 7.88 35.43 2.69
337 338 7.486551 GCGTGTGCCAAATTTATATAGTTTGAA 59.513 33.333 17.53 8.11 35.43 2.69
338 339 6.970043 GCGTGTGCCAAATTTATATAGTTTGA 59.030 34.615 17.53 3.67 35.43 2.69
339 340 6.749578 TGCGTGTGCCAAATTTATATAGTTTG 59.250 34.615 12.36 12.36 41.78 2.93
340 341 6.857956 TGCGTGTGCCAAATTTATATAGTTT 58.142 32.000 0.00 0.00 41.78 2.66
341 342 6.443934 TGCGTGTGCCAAATTTATATAGTT 57.556 33.333 0.00 0.00 41.78 2.24
342 343 6.633500 ATGCGTGTGCCAAATTTATATAGT 57.367 33.333 0.00 0.00 41.78 2.12
343 344 9.624697 AAATATGCGTGTGCCAAATTTATATAG 57.375 29.630 0.00 0.00 41.78 1.31
344 345 9.973450 AAAATATGCGTGTGCCAAATTTATATA 57.027 25.926 0.00 0.00 41.78 0.86
345 346 8.885494 AAAATATGCGTGTGCCAAATTTATAT 57.115 26.923 0.00 0.00 41.78 0.86
346 347 8.194104 AGAAAATATGCGTGTGCCAAATTTATA 58.806 29.630 0.00 0.00 41.78 0.98
347 348 7.041107 AGAAAATATGCGTGTGCCAAATTTAT 58.959 30.769 0.00 0.00 41.78 1.40
348 349 6.393990 AGAAAATATGCGTGTGCCAAATTTA 58.606 32.000 0.00 0.00 41.78 1.40
349 350 5.237048 AGAAAATATGCGTGTGCCAAATTT 58.763 33.333 0.00 0.00 41.78 1.82
350 351 4.819769 AGAAAATATGCGTGTGCCAAATT 58.180 34.783 0.00 0.00 41.78 1.82
351 352 4.423732 GAGAAAATATGCGTGTGCCAAAT 58.576 39.130 0.00 0.00 41.78 2.32
352 353 3.366883 GGAGAAAATATGCGTGTGCCAAA 60.367 43.478 0.00 0.00 41.78 3.28
353 354 2.163412 GGAGAAAATATGCGTGTGCCAA 59.837 45.455 0.00 0.00 41.78 4.52
354 355 1.742831 GGAGAAAATATGCGTGTGCCA 59.257 47.619 0.00 0.00 41.78 4.92
355 356 1.742831 TGGAGAAAATATGCGTGTGCC 59.257 47.619 0.00 0.00 41.78 5.01
356 357 3.698029 ATGGAGAAAATATGCGTGTGC 57.302 42.857 0.00 0.00 43.20 4.57
357 358 5.036737 GGAAATGGAGAAAATATGCGTGTG 58.963 41.667 0.00 0.00 0.00 3.82
358 359 4.704540 TGGAAATGGAGAAAATATGCGTGT 59.295 37.500 0.00 0.00 0.00 4.49
359 360 5.247507 TGGAAATGGAGAAAATATGCGTG 57.752 39.130 0.00 0.00 0.00 5.34
360 361 5.913137 TTGGAAATGGAGAAAATATGCGT 57.087 34.783 0.00 0.00 0.00 5.24
361 362 9.480053 AATAATTGGAAATGGAGAAAATATGCG 57.520 29.630 0.00 0.00 0.00 4.73
367 368 9.844257 ACAAACAATAATTGGAAATGGAGAAAA 57.156 25.926 0.00 0.00 34.12 2.29
368 369 9.844257 AACAAACAATAATTGGAAATGGAGAAA 57.156 25.926 0.00 0.00 34.12 2.52
369 370 9.270640 CAACAAACAATAATTGGAAATGGAGAA 57.729 29.630 0.00 0.00 34.12 2.87
370 371 7.877097 CCAACAAACAATAATTGGAAATGGAGA 59.123 33.333 0.00 0.00 43.66 3.71
371 372 7.361116 GCCAACAAACAATAATTGGAAATGGAG 60.361 37.037 6.05 0.00 43.66 3.86
372 373 6.429385 GCCAACAAACAATAATTGGAAATGGA 59.571 34.615 6.05 0.00 43.66 3.41
373 374 6.206243 TGCCAACAAACAATAATTGGAAATGG 59.794 34.615 6.05 0.00 43.66 3.16
374 375 7.199541 TGCCAACAAACAATAATTGGAAATG 57.800 32.000 6.05 0.00 43.66 2.32
375 376 7.284034 TGTTGCCAACAAACAATAATTGGAAAT 59.716 29.630 8.02 0.00 40.96 2.17
376 377 6.599244 TGTTGCCAACAAACAATAATTGGAAA 59.401 30.769 8.02 0.00 43.66 3.13
377 378 6.115446 TGTTGCCAACAAACAATAATTGGAA 58.885 32.000 8.02 0.00 43.66 3.53
378 379 5.674525 TGTTGCCAACAAACAATAATTGGA 58.325 33.333 8.02 0.00 43.66 3.53
379 380 5.998454 TGTTGCCAACAAACAATAATTGG 57.002 34.783 8.02 0.00 43.78 3.16
381 382 9.935241 TGTATATGTTGCCAACAAACAATAATT 57.065 25.926 15.17 0.00 45.86 1.40
382 383 9.935241 TTGTATATGTTGCCAACAAACAATAAT 57.065 25.926 22.16 6.79 45.86 1.28
383 384 9.764363 TTTGTATATGTTGCCAACAAACAATAA 57.236 25.926 24.54 15.06 45.86 1.40
384 385 9.935241 ATTTGTATATGTTGCCAACAAACAATA 57.065 25.926 24.54 18.71 45.86 1.90
385 386 8.845413 ATTTGTATATGTTGCCAACAAACAAT 57.155 26.923 24.54 15.31 45.86 2.71
386 387 9.764363 TTATTTGTATATGTTGCCAACAAACAA 57.236 25.926 22.16 22.16 45.86 2.83
387 388 9.197694 GTTATTTGTATATGTTGCCAACAAACA 57.802 29.630 15.17 15.39 45.86 2.83
388 389 9.418045 AGTTATTTGTATATGTTGCCAACAAAC 57.582 29.630 15.17 13.11 45.86 2.93
389 390 9.988815 AAGTTATTTGTATATGTTGCCAACAAA 57.011 25.926 15.17 3.43 45.86 2.83
390 391 9.416794 CAAGTTATTTGTATATGTTGCCAACAA 57.583 29.630 15.17 4.73 37.18 2.83
391 392 7.543868 GCAAGTTATTTGTATATGTTGCCAACA 59.456 33.333 13.44 13.44 41.35 3.33
392 393 7.759433 AGCAAGTTATTTGTATATGTTGCCAAC 59.241 33.333 0.00 0.00 36.69 3.77
393 394 7.758980 CAGCAAGTTATTTGTATATGTTGCCAA 59.241 33.333 0.00 0.00 36.69 4.52
394 395 7.257003 CAGCAAGTTATTTGTATATGTTGCCA 58.743 34.615 0.00 0.00 36.69 4.92
395 396 6.697019 CCAGCAAGTTATTTGTATATGTTGCC 59.303 38.462 0.00 0.00 36.69 4.52
396 397 6.697019 CCCAGCAAGTTATTTGTATATGTTGC 59.303 38.462 0.00 0.00 39.08 4.17
397 398 7.202526 CCCCAGCAAGTTATTTGTATATGTTG 58.797 38.462 0.00 0.00 39.08 3.33
398 399 6.183360 GCCCCAGCAAGTTATTTGTATATGTT 60.183 38.462 0.00 0.00 39.08 2.71
399 400 5.301805 GCCCCAGCAAGTTATTTGTATATGT 59.698 40.000 0.00 0.00 39.08 2.29
400 401 5.772521 GCCCCAGCAAGTTATTTGTATATG 58.227 41.667 0.00 0.00 39.08 1.78
438 439 2.757686 TATAGTTGCTCTCTCGCGTG 57.242 50.000 5.77 3.13 0.00 5.34
440 441 3.822594 AGATATAGTTGCTCTCTCGCG 57.177 47.619 0.00 0.00 0.00 5.87
441 442 6.674066 AGTTTAGATATAGTTGCTCTCTCGC 58.326 40.000 0.00 0.00 0.00 5.03
449 450 6.310711 GCGGGTGATAGTTTAGATATAGTTGC 59.689 42.308 0.00 0.00 0.00 4.17
492 499 7.414540 GCCTATGGTTGAAGACATCTTAGTTTG 60.415 40.741 0.00 0.00 36.11 2.93
513 520 2.368875 CACTGAACGGGATAAGGCCTAT 59.631 50.000 5.16 0.00 0.00 2.57
573 580 1.949525 GTGCCCATCTTGCATTCGTAT 59.050 47.619 0.00 0.00 41.46 3.06
577 584 0.179156 CGTGTGCCCATCTTGCATTC 60.179 55.000 0.00 0.00 41.46 2.67
580 587 3.364441 GCGTGTGCCCATCTTGCA 61.364 61.111 0.00 0.00 36.12 4.08
595 602 5.766702 AAACATTGAAGTTTATGCATGCG 57.233 34.783 14.09 0.00 39.76 4.73
641 650 2.265589 TTCGTTTTGAGAGGAACCCC 57.734 50.000 0.00 0.00 0.00 4.95
696 721 2.094854 AGTTAGTGGCGCTAGTGTACAC 60.095 50.000 18.56 18.56 0.00 2.90
728 753 2.026915 TGGAGGAGTACACGCTACAGTA 60.027 50.000 0.00 0.00 0.00 2.74
742 780 2.432444 CTCTATCCTACGCTGGAGGAG 58.568 57.143 13.74 10.36 46.27 3.69
745 783 2.432444 CTCCTCTATCCTACGCTGGAG 58.568 57.143 3.41 0.00 39.78 3.86
750 788 0.251430 AGCCCTCCTCTATCCTACGC 60.251 60.000 0.00 0.00 0.00 4.42
751 789 1.540267 CAGCCCTCCTCTATCCTACG 58.460 60.000 0.00 0.00 0.00 3.51
752 790 1.429687 TCCAGCCCTCCTCTATCCTAC 59.570 57.143 0.00 0.00 0.00 3.18
753 791 1.713647 CTCCAGCCCTCCTCTATCCTA 59.286 57.143 0.00 0.00 0.00 2.94
756 794 1.923356 CTCTCCAGCCCTCCTCTATC 58.077 60.000 0.00 0.00 0.00 2.08
757 795 0.178935 GCTCTCCAGCCCTCCTCTAT 60.179 60.000 0.00 0.00 40.14 1.98
758 796 1.231641 GCTCTCCAGCCCTCCTCTA 59.768 63.158 0.00 0.00 40.14 2.43
759 797 2.042025 GCTCTCCAGCCCTCCTCT 60.042 66.667 0.00 0.00 40.14 3.69
767 805 3.200593 CATGTGCGGCTCTCCAGC 61.201 66.667 0.00 0.00 46.06 4.85
768 806 2.513204 CCATGTGCGGCTCTCCAG 60.513 66.667 0.00 0.00 0.00 3.86
769 807 4.100084 CCCATGTGCGGCTCTCCA 62.100 66.667 0.00 0.00 0.00 3.86
901 994 2.126502 GATTTTGTGGCCGGTGCG 60.127 61.111 1.90 0.00 38.85 5.34
917 1011 0.471022 GGTTTGAAAAGCCTGGGGGA 60.471 55.000 0.00 0.00 44.70 4.81
918 1012 2.057830 GGTTTGAAAAGCCTGGGGG 58.942 57.895 0.00 0.00 44.70 5.40
925 1019 2.285083 GGTGGTTTGGGTTTGAAAAGC 58.715 47.619 0.00 0.00 35.01 3.51
992 1129 2.428925 CCCATGCCCATTGCTGTCC 61.429 63.158 0.00 0.00 42.00 4.02
994 1131 3.078836 GCCCATGCCCATTGCTGT 61.079 61.111 0.00 0.00 42.00 4.40
1006 1143 4.473520 CTTCACCGCTCCGCCCAT 62.474 66.667 0.00 0.00 0.00 4.00
1156 1293 2.544267 AGTACTTGCGCTTGTTCTTGAC 59.456 45.455 9.73 2.25 0.00 3.18
1245 1390 0.460987 GGATCGATGGATGGATCGGC 60.461 60.000 0.54 0.00 44.41 5.54
1248 1393 3.430098 GCTAGTGGATCGATGGATGGATC 60.430 52.174 0.54 3.66 40.12 3.36
1280 1425 3.146066 CCAAAGAACTCGGGATTGTTCA 58.854 45.455 8.28 0.00 43.38 3.18
1366 1541 4.467795 TCACCAGATTAGCTAGATATGGCC 59.532 45.833 20.29 0.00 39.02 5.36
1534 1801 1.730064 CAGCCGTGCGTTAATTACACT 59.270 47.619 3.94 0.00 32.07 3.55
1647 1934 1.372251 CTTGCGGGATCGATCGAGG 60.372 63.158 23.84 13.01 39.00 4.63
1739 2035 3.030291 AGATTCTGTAGCTGCTACTGCT 58.970 45.455 32.64 22.95 41.32 4.24
1740 2036 3.380142 GAGATTCTGTAGCTGCTACTGC 58.620 50.000 32.64 21.51 37.78 4.40
1741 2037 3.549827 CGGAGATTCTGTAGCTGCTACTG 60.550 52.174 32.64 31.14 37.78 2.74
1751 2047 0.100682 GCAGCGACGGAGATTCTGTA 59.899 55.000 0.00 0.00 35.83 2.74
1820 2116 1.375013 GCATGCCAGCCAAAACCTG 60.375 57.895 6.36 0.00 0.00 4.00
1821 2117 3.062639 GCATGCCAGCCAAAACCT 58.937 55.556 6.36 0.00 0.00 3.50
1836 2132 1.304630 ATTGCATGAGCTGGTGGCA 60.305 52.632 0.00 0.00 44.79 4.92
1837 2133 1.141019 CATTGCATGAGCTGGTGGC 59.859 57.895 0.00 0.00 42.74 5.01
1838 2134 1.141019 GCATTGCATGAGCTGGTGG 59.859 57.895 3.15 0.00 42.74 4.61
1839 2135 0.100682 GAGCATTGCATGAGCTGGTG 59.899 55.000 11.91 0.00 42.74 4.17
1840 2136 1.035932 GGAGCATTGCATGAGCTGGT 61.036 55.000 11.91 0.00 42.74 4.00
1841 2137 1.734137 GGAGCATTGCATGAGCTGG 59.266 57.895 11.91 0.00 42.74 4.85
1906 2204 4.004982 GCGAAAGGAACAGGTAACCAATA 58.995 43.478 0.00 0.00 37.17 1.90
1907 2205 2.817844 GCGAAAGGAACAGGTAACCAAT 59.182 45.455 0.00 0.00 37.17 3.16
1943 2245 0.739813 CTAGTGTACCAAGGCGGCAC 60.740 60.000 13.08 0.00 39.03 5.01
1944 2246 1.594833 CTAGTGTACCAAGGCGGCA 59.405 57.895 13.08 0.00 39.03 5.69
1945 2247 1.814169 GCTAGTGTACCAAGGCGGC 60.814 63.158 0.00 0.00 39.03 6.53
1946 2248 1.153429 GGCTAGTGTACCAAGGCGG 60.153 63.158 0.00 0.00 42.50 6.13
1947 2249 0.460284 CTGGCTAGTGTACCAAGGCG 60.460 60.000 7.83 0.00 38.56 5.52
1949 2251 1.135083 CGTCTGGCTAGTGTACCAAGG 60.135 57.143 0.00 0.00 34.96 3.61
1950 2252 1.135083 CCGTCTGGCTAGTGTACCAAG 60.135 57.143 0.00 0.00 34.96 3.61
1951 2253 0.892755 CCGTCTGGCTAGTGTACCAA 59.107 55.000 0.00 0.00 34.96 3.67
1952 2254 2.575108 CCGTCTGGCTAGTGTACCA 58.425 57.895 0.00 0.00 0.00 3.25
2022 2390 5.467035 TCTTCCTTTTTGGCAACTAATGG 57.533 39.130 0.00 4.86 35.26 3.16
2043 2411 9.255304 GAAACAATCTAGAGATCAGTACCAATC 57.745 37.037 0.00 0.00 32.75 2.67
2047 2415 7.028926 TCGAAACAATCTAGAGATCAGTACC 57.971 40.000 0.00 0.00 32.75 3.34
2051 2428 6.205784 GGACTCGAAACAATCTAGAGATCAG 58.794 44.000 0.00 0.00 32.75 2.90
2060 2437 0.391263 GCGGGGACTCGAAACAATCT 60.391 55.000 0.00 0.00 0.00 2.40
2086 2463 1.739466 TCATTCCTGAACGCATCTTGC 59.261 47.619 0.00 0.00 40.69 4.01
2096 2473 9.213777 AGTATAATCCTACAGTTCATTCCTGAA 57.786 33.333 0.00 0.00 39.07 3.02
2097 2474 8.783660 AGTATAATCCTACAGTTCATTCCTGA 57.216 34.615 0.00 0.00 34.04 3.86
2098 2475 9.482627 GAAGTATAATCCTACAGTTCATTCCTG 57.517 37.037 0.00 0.00 36.01 3.86
2099 2476 9.213777 TGAAGTATAATCCTACAGTTCATTCCT 57.786 33.333 0.00 0.00 0.00 3.36
2100 2477 9.832445 TTGAAGTATAATCCTACAGTTCATTCC 57.168 33.333 0.00 0.00 0.00 3.01
2130 2507 8.241367 CGCACAAATTAAGTAATTAACCTTCCT 58.759 33.333 0.00 0.00 35.00 3.36
2137 2514 7.148885 GCTTGCACGCACAAATTAAGTAATTAA 60.149 33.333 10.77 0.00 35.00 1.40
2138 2515 6.306837 GCTTGCACGCACAAATTAAGTAATTA 59.693 34.615 10.77 0.00 35.00 1.40
2139 2516 5.118510 GCTTGCACGCACAAATTAAGTAATT 59.881 36.000 10.77 0.00 37.49 1.40
2140 2517 4.621034 GCTTGCACGCACAAATTAAGTAAT 59.379 37.500 10.77 0.00 0.00 1.89
2141 2518 3.978217 GCTTGCACGCACAAATTAAGTAA 59.022 39.130 10.77 0.00 0.00 2.24
2142 2519 3.560503 GCTTGCACGCACAAATTAAGTA 58.439 40.909 10.77 0.00 0.00 2.24
2143 2520 2.393764 GCTTGCACGCACAAATTAAGT 58.606 42.857 10.77 0.00 0.00 2.24
2144 2521 1.720852 GGCTTGCACGCACAAATTAAG 59.279 47.619 17.72 0.00 0.00 1.85
2183 2560 0.758734 TGATCCCTGATTAGGCACCG 59.241 55.000 0.00 0.00 43.16 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.