Multiple sequence alignment - TraesCS2A01G415500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G415500 chr2A 100.000 1921 0 0 1 1921 672344270 672342350 0.000000e+00 3548
1 TraesCS2A01G415500 chr2A 100.000 573 0 0 2150 2722 672342121 672341549 0.000000e+00 1059
2 TraesCS2A01G415500 chr2A 89.744 117 11 1 2323 2438 445022334 445022218 6.070000e-32 148
3 TraesCS2A01G415500 chr2B 91.520 1592 77 15 368 1921 624536321 624534750 0.000000e+00 2139
4 TraesCS2A01G415500 chr2B 90.400 375 19 3 1 369 624536715 624536352 6.820000e-131 477
5 TraesCS2A01G415500 chr2B 89.744 117 11 1 2323 2438 402546417 402546301 6.070000e-32 148
6 TraesCS2A01G415500 chr2B 87.395 119 8 2 2150 2268 624534685 624534574 2.200000e-26 130
7 TraesCS2A01G415500 chr2D 90.736 1522 78 20 429 1919 527386699 527385210 0.000000e+00 1971
8 TraesCS2A01G415500 chr2D 87.037 378 22 9 1 370 527387163 527386805 4.220000e-108 401
9 TraesCS2A01G415500 chr2D 87.879 132 14 2 2305 2435 25013354 25013484 1.310000e-33 154
10 TraesCS2A01G415500 chr3B 90.152 132 11 2 2305 2435 327942000 327942130 1.300000e-38 171
11 TraesCS2A01G415500 chr3B 88.525 122 13 1 2314 2434 749866696 749866575 2.180000e-31 147
12 TraesCS2A01G415500 chr7D 86.957 138 14 4 2305 2440 16909588 16909723 4.690000e-33 152
13 TraesCS2A01G415500 chr5D 86.364 132 16 2 2305 2435 30432968 30433098 2.830000e-30 143
14 TraesCS2A01G415500 chr3D 86.364 132 16 2 2305 2435 200476129 200476259 2.830000e-30 143
15 TraesCS2A01G415500 chr1B 86.364 132 15 3 2305 2435 547985573 547985702 1.020000e-29 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G415500 chr2A 672341549 672344270 2721 True 2303.500000 3548 100.000000 1 2722 2 chr2A.!!$R2 2721
1 TraesCS2A01G415500 chr2B 624534574 624536715 2141 True 915.333333 2139 89.771667 1 2268 3 chr2B.!!$R2 2267
2 TraesCS2A01G415500 chr2D 527385210 527387163 1953 True 1186.000000 1971 88.886500 1 1919 2 chr2D.!!$R1 1918

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 497 0.039472 ATACCATGCCACAAGCCACA 59.961 50.0 0.0 0.0 42.71 4.17 F
792 856 0.242825 TCGGATCAACGACTCACCAC 59.757 55.0 0.0 0.0 38.06 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1539 1620 0.108424 AACTCTTGCCGCTCTAGCAG 60.108 55.0 2.44 0.00 42.17 4.24 R
2550 2662 0.041684 AGCCCAAATCTGAAAGGGGG 59.958 55.0 12.50 8.15 41.75 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.821969 AGGCTTGCAAAATCCAGTAGTG 59.178 45.455 0.00 0.00 0.00 2.74
185 188 5.821470 CCTGCAAGTATGTTCATCAGAGATT 59.179 40.000 0.00 0.00 0.00 2.40
186 189 6.318144 CCTGCAAGTATGTTCATCAGAGATTT 59.682 38.462 0.00 0.00 0.00 2.17
187 190 7.148120 CCTGCAAGTATGTTCATCAGAGATTTT 60.148 37.037 0.00 0.00 0.00 1.82
188 191 8.791327 TGCAAGTATGTTCATCAGAGATTTTA 57.209 30.769 0.00 0.00 0.00 1.52
189 192 9.399797 TGCAAGTATGTTCATCAGAGATTTTAT 57.600 29.630 0.00 0.00 0.00 1.40
315 318 8.655935 AAAATATCATATCAATCAACCTCCCC 57.344 34.615 0.00 0.00 0.00 4.81
372 413 5.448632 CGGTTTTAGCAGGTATGTCCATTTC 60.449 44.000 0.00 0.00 39.02 2.17
383 424 0.931005 GTCCATTTCTCGTCGCCATC 59.069 55.000 0.00 0.00 0.00 3.51
428 492 4.400251 ACTGAAATGATACCATGCCACAAG 59.600 41.667 0.00 0.00 32.36 3.16
429 493 3.130869 TGAAATGATACCATGCCACAAGC 59.869 43.478 0.00 0.00 44.14 4.01
430 494 1.696063 ATGATACCATGCCACAAGCC 58.304 50.000 0.00 0.00 42.71 4.35
431 495 0.330941 TGATACCATGCCACAAGCCA 59.669 50.000 0.00 0.00 42.71 4.75
432 496 0.740737 GATACCATGCCACAAGCCAC 59.259 55.000 0.00 0.00 42.71 5.01
433 497 0.039472 ATACCATGCCACAAGCCACA 59.961 50.000 0.00 0.00 42.71 4.17
434 498 0.608856 TACCATGCCACAAGCCACAG 60.609 55.000 0.00 0.00 42.71 3.66
454 518 0.614415 GCCACAACCAATCCCCATCA 60.614 55.000 0.00 0.00 0.00 3.07
570 634 1.812922 GACAGCATCCACAGCCGAG 60.813 63.158 0.00 0.00 0.00 4.63
658 722 2.109387 CCACCACCGGAAACACGA 59.891 61.111 9.46 0.00 35.47 4.35
659 723 1.524165 CCACCACCGGAAACACGAA 60.524 57.895 9.46 0.00 35.47 3.85
673 737 3.009115 CGAAGCCCCCTTCCTCCA 61.009 66.667 0.00 0.00 43.66 3.86
699 763 2.438434 CCATCCACGGCCTGGTTC 60.438 66.667 17.55 0.00 41.52 3.62
755 819 1.263217 ACACGAACAAAATCGACCTGC 59.737 47.619 3.47 0.00 45.48 4.85
792 856 0.242825 TCGGATCAACGACTCACCAC 59.757 55.000 0.00 0.00 38.06 4.16
799 863 2.734723 CGACTCACCACGCACCAG 60.735 66.667 0.00 0.00 0.00 4.00
800 864 2.357517 GACTCACCACGCACCAGG 60.358 66.667 0.00 0.00 0.00 4.45
874 942 4.643387 GCTGGGCGGTTGAGGTGT 62.643 66.667 0.00 0.00 0.00 4.16
875 943 2.669569 CTGGGCGGTTGAGGTGTG 60.670 66.667 0.00 0.00 0.00 3.82
878 951 2.351276 GGCGGTTGAGGTGTGGAT 59.649 61.111 0.00 0.00 0.00 3.41
891 964 0.614415 TGTGGATTGGGGAATGGCAC 60.614 55.000 0.00 0.00 0.00 5.01
916 992 0.539051 GTGATCACTGAGAGGTGGGG 59.461 60.000 18.83 0.00 37.75 4.96
968 1047 4.572571 TGGCAACGGGTCCCACAC 62.573 66.667 9.12 0.00 42.51 3.82
995 1074 1.078214 ATGGACATGACACGGCCTG 60.078 57.895 0.00 0.21 0.00 4.85
1408 1489 0.669077 TGCGGCAAATTTTACACCGT 59.331 45.000 15.89 0.00 45.53 4.83
1539 1620 5.468072 CAGTACTGCCATGGATTTGATCTAC 59.532 44.000 18.40 2.64 0.00 2.59
1540 1621 4.785346 ACTGCCATGGATTTGATCTACT 57.215 40.909 18.40 0.00 0.00 2.57
1541 1622 4.458397 ACTGCCATGGATTTGATCTACTG 58.542 43.478 18.40 0.00 0.00 2.74
1568 1663 1.466167 CGGCAAGAGTTTCCATGTGAG 59.534 52.381 0.00 0.00 0.00 3.51
1569 1664 1.815003 GGCAAGAGTTTCCATGTGAGG 59.185 52.381 0.00 0.00 0.00 3.86
1570 1665 2.553028 GGCAAGAGTTTCCATGTGAGGA 60.553 50.000 0.00 0.00 35.41 3.71
1571 1666 3.350833 GCAAGAGTTTCCATGTGAGGAT 58.649 45.455 0.00 0.00 37.56 3.24
1572 1667 3.376546 GCAAGAGTTTCCATGTGAGGATC 59.623 47.826 0.00 0.00 37.56 3.36
1612 1707 3.833650 TCACACATTTGGGAGATGCAAAT 59.166 39.130 0.00 0.00 29.10 2.32
1645 1740 7.764901 TCACATCTGTACTGTACTACTACTCTG 59.235 40.741 17.98 7.55 0.00 3.35
1646 1741 7.549842 CACATCTGTACTGTACTACTACTCTGT 59.450 40.741 17.98 8.05 0.00 3.41
1647 1742 8.756927 ACATCTGTACTGTACTACTACTCTGTA 58.243 37.037 17.98 0.00 0.00 2.74
1648 1743 9.251792 CATCTGTACTGTACTACTACTCTGTAG 57.748 40.741 17.98 3.49 43.88 2.74
1649 1744 7.780064 TCTGTACTGTACTACTACTCTGTAGG 58.220 42.308 17.98 0.00 42.92 3.18
1650 1745 7.617329 TCTGTACTGTACTACTACTCTGTAGGA 59.383 40.741 17.98 0.11 42.92 2.94
1703 1799 3.524095 TTTTGATCCTGCCTTCTGGAA 57.476 42.857 0.00 0.00 42.50 3.53
1731 1827 3.133003 CCATTGTACTCGTCTCCCAGATT 59.867 47.826 0.00 0.00 0.00 2.40
1831 1943 1.135915 AGTTGCTTCGCGAGATCAGAT 59.864 47.619 9.59 0.00 41.60 2.90
1879 1991 4.323792 CCTTCTTGTCATTTCCTCCTAGCA 60.324 45.833 0.00 0.00 0.00 3.49
2238 2350 9.448438 AACACAGTATAATTGAAGTTGCTCATA 57.552 29.630 0.00 0.00 0.00 2.15
2239 2351 9.102757 ACACAGTATAATTGAAGTTGCTCATAG 57.897 33.333 0.00 0.00 0.00 2.23
2240 2352 9.102757 CACAGTATAATTGAAGTTGCTCATAGT 57.897 33.333 0.00 0.00 0.00 2.12
2256 2368 5.795939 GCTCATAGTATACACGAGCATACAC 59.204 44.000 24.71 5.49 46.55 2.90
2268 2380 0.031585 GCATACACTCGCCCGTATGA 59.968 55.000 16.98 0.00 45.09 2.15
2269 2381 1.537348 GCATACACTCGCCCGTATGAA 60.537 52.381 16.98 0.00 45.09 2.57
2270 2382 2.124903 CATACACTCGCCCGTATGAAC 58.875 52.381 10.59 0.00 45.09 3.18
2271 2383 1.466856 TACACTCGCCCGTATGAACT 58.533 50.000 2.06 0.00 0.00 3.01
2272 2384 0.172803 ACACTCGCCCGTATGAACTC 59.827 55.000 2.06 0.00 0.00 3.01
2273 2385 0.172578 CACTCGCCCGTATGAACTCA 59.827 55.000 0.00 0.00 0.00 3.41
2274 2386 0.172803 ACTCGCCCGTATGAACTCAC 59.827 55.000 0.00 0.00 0.00 3.51
2275 2387 0.172578 CTCGCCCGTATGAACTCACA 59.827 55.000 0.00 0.00 0.00 3.58
2276 2388 0.108992 TCGCCCGTATGAACTCACAC 60.109 55.000 0.00 0.00 0.00 3.82
2277 2389 0.389296 CGCCCGTATGAACTCACACA 60.389 55.000 0.00 0.00 0.00 3.72
2278 2390 1.739035 CGCCCGTATGAACTCACACAT 60.739 52.381 0.00 0.00 0.00 3.21
2279 2391 1.665679 GCCCGTATGAACTCACACATG 59.334 52.381 0.00 0.00 0.00 3.21
2280 2392 1.665679 CCCGTATGAACTCACACATGC 59.334 52.381 0.00 0.00 0.00 4.06
2281 2393 2.345876 CCGTATGAACTCACACATGCA 58.654 47.619 0.00 0.00 0.00 3.96
2282 2394 2.094258 CCGTATGAACTCACACATGCAC 59.906 50.000 0.00 0.00 0.00 4.57
2283 2395 2.736192 CGTATGAACTCACACATGCACA 59.264 45.455 0.00 0.00 0.00 4.57
2284 2396 3.423515 CGTATGAACTCACACATGCACAC 60.424 47.826 0.00 0.00 0.00 3.82
2285 2397 1.308047 TGAACTCACACATGCACACC 58.692 50.000 0.00 0.00 0.00 4.16
2286 2398 0.593128 GAACTCACACATGCACACCC 59.407 55.000 0.00 0.00 0.00 4.61
2287 2399 0.183492 AACTCACACATGCACACCCT 59.817 50.000 0.00 0.00 0.00 4.34
2288 2400 0.183492 ACTCACACATGCACACCCTT 59.817 50.000 0.00 0.00 0.00 3.95
2289 2401 0.594602 CTCACACATGCACACCCTTG 59.405 55.000 0.00 0.00 0.00 3.61
2290 2402 0.182299 TCACACATGCACACCCTTGA 59.818 50.000 0.00 0.00 0.00 3.02
2291 2403 0.594602 CACACATGCACACCCTTGAG 59.405 55.000 0.00 0.00 0.00 3.02
2292 2404 1.174712 ACACATGCACACCCTTGAGC 61.175 55.000 0.00 0.00 39.59 4.26
2295 2407 2.203337 TGCACACCCTTGAGCACC 60.203 61.111 0.00 0.00 43.46 5.01
2296 2408 2.113986 GCACACCCTTGAGCACCT 59.886 61.111 0.00 0.00 39.02 4.00
2297 2409 1.529244 GCACACCCTTGAGCACCTT 60.529 57.895 0.00 0.00 39.02 3.50
2298 2410 1.109323 GCACACCCTTGAGCACCTTT 61.109 55.000 0.00 0.00 39.02 3.11
2299 2411 0.670162 CACACCCTTGAGCACCTTTG 59.330 55.000 0.00 0.00 0.00 2.77
2300 2412 0.550914 ACACCCTTGAGCACCTTTGA 59.449 50.000 0.00 0.00 0.00 2.69
2301 2413 1.242076 CACCCTTGAGCACCTTTGAG 58.758 55.000 0.00 0.00 0.00 3.02
2302 2414 1.140312 ACCCTTGAGCACCTTTGAGA 58.860 50.000 0.00 0.00 0.00 3.27
2303 2415 1.494721 ACCCTTGAGCACCTTTGAGAA 59.505 47.619 0.00 0.00 0.00 2.87
2304 2416 2.091885 ACCCTTGAGCACCTTTGAGAAA 60.092 45.455 0.00 0.00 0.00 2.52
2305 2417 2.294512 CCCTTGAGCACCTTTGAGAAAC 59.705 50.000 0.00 0.00 0.00 2.78
2306 2418 3.217626 CCTTGAGCACCTTTGAGAAACT 58.782 45.455 0.00 0.00 0.00 2.66
2307 2419 3.004106 CCTTGAGCACCTTTGAGAAACTG 59.996 47.826 0.00 0.00 0.00 3.16
2308 2420 3.558931 TGAGCACCTTTGAGAAACTGA 57.441 42.857 0.00 0.00 0.00 3.41
2309 2421 3.470709 TGAGCACCTTTGAGAAACTGAG 58.529 45.455 0.00 0.00 0.00 3.35
2310 2422 3.134623 TGAGCACCTTTGAGAAACTGAGA 59.865 43.478 0.00 0.00 0.00 3.27
2311 2423 4.130118 GAGCACCTTTGAGAAACTGAGAA 58.870 43.478 0.00 0.00 0.00 2.87
2312 2424 4.133078 AGCACCTTTGAGAAACTGAGAAG 58.867 43.478 0.00 0.00 0.00 2.85
2313 2425 4.130118 GCACCTTTGAGAAACTGAGAAGA 58.870 43.478 0.00 0.00 0.00 2.87
2314 2426 4.576463 GCACCTTTGAGAAACTGAGAAGAA 59.424 41.667 0.00 0.00 0.00 2.52
2315 2427 5.504830 GCACCTTTGAGAAACTGAGAAGAAC 60.505 44.000 0.00 0.00 0.00 3.01
2316 2428 5.586243 CACCTTTGAGAAACTGAGAAGAACA 59.414 40.000 0.00 0.00 0.00 3.18
2317 2429 6.261826 CACCTTTGAGAAACTGAGAAGAACAT 59.738 38.462 0.00 0.00 0.00 2.71
2318 2430 6.484977 ACCTTTGAGAAACTGAGAAGAACATC 59.515 38.462 0.00 0.00 0.00 3.06
2319 2431 6.347240 CCTTTGAGAAACTGAGAAGAACATCG 60.347 42.308 0.00 0.00 0.00 3.84
2320 2432 3.990469 TGAGAAACTGAGAAGAACATCGC 59.010 43.478 0.00 0.00 0.00 4.58
2321 2433 2.989840 AGAAACTGAGAAGAACATCGCG 59.010 45.455 0.00 0.00 0.00 5.87
2322 2434 1.714794 AACTGAGAAGAACATCGCGG 58.285 50.000 6.13 0.00 0.00 6.46
2323 2435 0.108615 ACTGAGAAGAACATCGCGGG 60.109 55.000 6.13 0.81 30.66 6.13
2324 2436 0.173481 CTGAGAAGAACATCGCGGGA 59.827 55.000 6.13 4.03 0.00 5.14
2325 2437 0.824109 TGAGAAGAACATCGCGGGAT 59.176 50.000 9.50 9.50 0.00 3.85
2332 2444 2.203056 CATCGCGGGATGCCTGAA 60.203 61.111 26.79 0.00 43.26 3.02
2333 2445 1.819208 CATCGCGGGATGCCTGAAA 60.819 57.895 26.79 0.00 43.26 2.69
2334 2446 1.149174 ATCGCGGGATGCCTGAAAT 59.851 52.632 14.93 0.00 42.08 2.17
2335 2447 0.396435 ATCGCGGGATGCCTGAAATA 59.604 50.000 14.93 0.00 42.08 1.40
2336 2448 0.179234 TCGCGGGATGCCTGAAATAA 59.821 50.000 6.13 0.00 42.08 1.40
2337 2449 1.021202 CGCGGGATGCCTGAAATAAA 58.979 50.000 0.28 0.00 42.08 1.40
2338 2450 1.608590 CGCGGGATGCCTGAAATAAAT 59.391 47.619 0.28 0.00 42.08 1.40
2339 2451 2.034558 CGCGGGATGCCTGAAATAAATT 59.965 45.455 0.28 0.00 42.08 1.82
2340 2452 3.642705 GCGGGATGCCTGAAATAAATTC 58.357 45.455 0.28 0.00 37.76 2.17
2341 2453 3.068024 GCGGGATGCCTGAAATAAATTCA 59.932 43.478 0.28 0.00 45.23 2.57
2355 2467 7.862372 TGAAATAAATTCAGGAATAATGCGAGC 59.138 33.333 0.00 0.00 43.08 5.03
2356 2468 6.882610 ATAAATTCAGGAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
2357 2469 4.558538 AATTCAGGAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
2358 2470 1.953559 TCAGGAATAATGCGAGCACC 58.046 50.000 0.00 0.00 0.00 5.01
2359 2471 1.209261 TCAGGAATAATGCGAGCACCA 59.791 47.619 0.00 0.00 0.00 4.17
2360 2472 2.016318 CAGGAATAATGCGAGCACCAA 58.984 47.619 0.00 0.00 0.00 3.67
2361 2473 2.620115 CAGGAATAATGCGAGCACCAAT 59.380 45.455 0.00 0.00 0.00 3.16
2362 2474 2.620115 AGGAATAATGCGAGCACCAATG 59.380 45.455 0.00 0.00 0.00 2.82
2363 2475 2.358898 GGAATAATGCGAGCACCAATGT 59.641 45.455 0.00 0.00 0.00 2.71
2364 2476 3.548818 GGAATAATGCGAGCACCAATGTC 60.549 47.826 0.00 0.00 0.00 3.06
2365 2477 2.106477 TAATGCGAGCACCAATGTCA 57.894 45.000 0.00 0.00 0.00 3.58
2366 2478 1.246649 AATGCGAGCACCAATGTCAA 58.753 45.000 0.00 0.00 0.00 3.18
2367 2479 0.806868 ATGCGAGCACCAATGTCAAG 59.193 50.000 0.00 0.00 0.00 3.02
2368 2480 0.534877 TGCGAGCACCAATGTCAAGT 60.535 50.000 0.00 0.00 0.00 3.16
2369 2481 0.593128 GCGAGCACCAATGTCAAGTT 59.407 50.000 0.00 0.00 0.00 2.66
2370 2482 1.001378 GCGAGCACCAATGTCAAGTTT 60.001 47.619 0.00 0.00 0.00 2.66
2371 2483 2.225491 GCGAGCACCAATGTCAAGTTTA 59.775 45.455 0.00 0.00 0.00 2.01
2372 2484 3.667960 GCGAGCACCAATGTCAAGTTTAG 60.668 47.826 0.00 0.00 0.00 1.85
2373 2485 3.745975 CGAGCACCAATGTCAAGTTTAGA 59.254 43.478 0.00 0.00 0.00 2.10
2374 2486 4.377431 CGAGCACCAATGTCAAGTTTAGAC 60.377 45.833 0.00 0.00 36.55 2.59
2375 2487 4.718961 AGCACCAATGTCAAGTTTAGACT 58.281 39.130 0.00 0.00 36.94 3.24
2376 2488 5.133221 AGCACCAATGTCAAGTTTAGACTT 58.867 37.500 0.00 0.00 46.85 3.01
2389 2501 5.749462 AGTTTAGACTTGAATCCTGATGGG 58.251 41.667 0.00 0.00 29.87 4.00
2390 2502 2.725221 AGACTTGAATCCTGATGGGC 57.275 50.000 0.00 0.00 34.39 5.36
2391 2503 2.203584 AGACTTGAATCCTGATGGGCT 58.796 47.619 0.00 0.00 34.39 5.19
2392 2504 3.387962 AGACTTGAATCCTGATGGGCTA 58.612 45.455 0.00 0.00 34.39 3.93
2393 2505 3.390639 AGACTTGAATCCTGATGGGCTAG 59.609 47.826 0.00 0.00 34.39 3.42
2394 2506 2.441001 ACTTGAATCCTGATGGGCTAGG 59.559 50.000 0.00 0.00 35.34 3.02
2395 2507 1.438469 TGAATCCTGATGGGCTAGGG 58.562 55.000 0.00 0.00 34.76 3.53
2396 2508 1.061424 TGAATCCTGATGGGCTAGGGA 60.061 52.381 0.00 0.00 34.76 4.20
2397 2509 2.273619 GAATCCTGATGGGCTAGGGAT 58.726 52.381 0.00 0.00 38.29 3.85
2398 2510 3.181396 TGAATCCTGATGGGCTAGGGATA 60.181 47.826 0.00 0.00 35.97 2.59
2399 2511 3.811152 ATCCTGATGGGCTAGGGATAT 57.189 47.619 0.00 0.00 35.34 1.63
2400 2512 3.121929 TCCTGATGGGCTAGGGATATC 57.878 52.381 0.00 0.00 34.76 1.63
2401 2513 2.386811 TCCTGATGGGCTAGGGATATCA 59.613 50.000 4.83 0.00 34.76 2.15
2402 2514 2.503356 CCTGATGGGCTAGGGATATCAC 59.497 54.545 4.83 0.00 0.00 3.06
2403 2515 3.448934 CTGATGGGCTAGGGATATCACT 58.551 50.000 13.14 13.14 0.00 3.41
2404 2516 3.176411 TGATGGGCTAGGGATATCACTG 58.824 50.000 18.14 8.68 0.00 3.66
2405 2517 2.795291 TGGGCTAGGGATATCACTGT 57.205 50.000 18.14 0.00 0.00 3.55
2406 2518 3.060479 TGGGCTAGGGATATCACTGTT 57.940 47.619 18.14 0.00 0.00 3.16
2407 2519 2.972713 TGGGCTAGGGATATCACTGTTC 59.027 50.000 18.14 6.12 0.00 3.18
2408 2520 3.243724 GGGCTAGGGATATCACTGTTCT 58.756 50.000 18.14 0.00 0.00 3.01
2409 2521 3.259625 GGGCTAGGGATATCACTGTTCTC 59.740 52.174 18.14 2.61 0.00 2.87
2410 2522 3.259625 GGCTAGGGATATCACTGTTCTCC 59.740 52.174 18.14 7.29 0.00 3.71
2411 2523 4.156477 GCTAGGGATATCACTGTTCTCCT 58.844 47.826 18.14 7.82 0.00 3.69
2412 2524 5.326069 GCTAGGGATATCACTGTTCTCCTA 58.674 45.833 18.14 8.54 0.00 2.94
2413 2525 5.775701 GCTAGGGATATCACTGTTCTCCTAA 59.224 44.000 18.14 0.00 0.00 2.69
2414 2526 6.294843 GCTAGGGATATCACTGTTCTCCTAAC 60.295 46.154 18.14 2.01 0.00 2.34
2415 2527 4.902448 AGGGATATCACTGTTCTCCTAACC 59.098 45.833 6.71 0.00 0.00 2.85
2416 2528 4.654262 GGGATATCACTGTTCTCCTAACCA 59.346 45.833 4.83 0.00 0.00 3.67
2417 2529 5.308237 GGGATATCACTGTTCTCCTAACCAT 59.692 44.000 4.83 0.00 0.00 3.55
2418 2530 6.459923 GGATATCACTGTTCTCCTAACCATC 58.540 44.000 4.83 0.00 0.00 3.51
2419 2531 4.762289 ATCACTGTTCTCCTAACCATCC 57.238 45.455 0.00 0.00 0.00 3.51
2420 2532 3.516586 TCACTGTTCTCCTAACCATCCA 58.483 45.455 0.00 0.00 0.00 3.41
2421 2533 3.907474 TCACTGTTCTCCTAACCATCCAA 59.093 43.478 0.00 0.00 0.00 3.53
2422 2534 4.003648 CACTGTTCTCCTAACCATCCAAC 58.996 47.826 0.00 0.00 0.00 3.77
2423 2535 3.009143 ACTGTTCTCCTAACCATCCAACC 59.991 47.826 0.00 0.00 0.00 3.77
2424 2536 2.983192 TGTTCTCCTAACCATCCAACCA 59.017 45.455 0.00 0.00 0.00 3.67
2425 2537 3.591527 TGTTCTCCTAACCATCCAACCAT 59.408 43.478 0.00 0.00 0.00 3.55
2426 2538 4.785914 TGTTCTCCTAACCATCCAACCATA 59.214 41.667 0.00 0.00 0.00 2.74
2427 2539 5.104527 TGTTCTCCTAACCATCCAACCATAG 60.105 44.000 0.00 0.00 0.00 2.23
2428 2540 3.973973 TCTCCTAACCATCCAACCATAGG 59.026 47.826 0.00 0.00 32.90 2.57
2429 2541 3.716872 CTCCTAACCATCCAACCATAGGT 59.283 47.826 0.00 0.00 37.65 3.08
2445 2557 6.631971 CCATAGGTTGGTTTGCAAAAATTT 57.368 33.333 14.67 0.70 40.99 1.82
2446 2558 6.667370 CCATAGGTTGGTTTGCAAAAATTTC 58.333 36.000 14.67 0.34 40.99 2.17
2447 2559 6.486320 CCATAGGTTGGTTTGCAAAAATTTCT 59.514 34.615 14.67 11.37 40.99 2.52
2448 2560 7.013178 CCATAGGTTGGTTTGCAAAAATTTCTT 59.987 33.333 14.67 3.39 40.99 2.52
2449 2561 6.832520 AGGTTGGTTTGCAAAAATTTCTTT 57.167 29.167 14.67 0.00 0.00 2.52
2450 2562 6.851609 AGGTTGGTTTGCAAAAATTTCTTTC 58.148 32.000 14.67 0.00 0.00 2.62
2451 2563 5.736824 GGTTGGTTTGCAAAAATTTCTTTCG 59.263 36.000 14.67 0.00 0.00 3.46
2452 2564 5.476752 TGGTTTGCAAAAATTTCTTTCGG 57.523 34.783 14.67 0.00 0.00 4.30
2453 2565 4.201861 TGGTTTGCAAAAATTTCTTTCGGC 60.202 37.500 14.67 0.00 0.00 5.54
2454 2566 4.201861 GGTTTGCAAAAATTTCTTTCGGCA 60.202 37.500 14.67 0.00 33.87 5.69
2455 2567 4.528531 TTGCAAAAATTTCTTTCGGCAC 57.471 36.364 0.00 0.00 34.81 5.01
2456 2568 3.525537 TGCAAAAATTTCTTTCGGCACA 58.474 36.364 0.00 0.00 31.99 4.57
2457 2569 3.935203 TGCAAAAATTTCTTTCGGCACAA 59.065 34.783 0.00 0.00 31.99 3.33
2458 2570 4.201763 TGCAAAAATTTCTTTCGGCACAAC 60.202 37.500 0.00 0.00 31.99 3.32
2459 2571 4.201763 GCAAAAATTTCTTTCGGCACAACA 60.202 37.500 0.00 0.00 0.00 3.33
2460 2572 5.672321 GCAAAAATTTCTTTCGGCACAACAA 60.672 36.000 0.00 0.00 0.00 2.83
2461 2573 6.485393 CAAAAATTTCTTTCGGCACAACAAT 58.515 32.000 0.00 0.00 0.00 2.71
2462 2574 6.676237 AAAATTTCTTTCGGCACAACAATT 57.324 29.167 0.00 0.00 0.00 2.32
2463 2575 7.778470 AAAATTTCTTTCGGCACAACAATTA 57.222 28.000 0.00 0.00 0.00 1.40
2464 2576 7.406799 AAATTTCTTTCGGCACAACAATTAG 57.593 32.000 0.00 0.00 0.00 1.73
2465 2577 3.552604 TCTTTCGGCACAACAATTAGC 57.447 42.857 0.00 0.00 0.00 3.09
2466 2578 2.881513 TCTTTCGGCACAACAATTAGCA 59.118 40.909 0.00 0.00 0.00 3.49
2467 2579 3.505680 TCTTTCGGCACAACAATTAGCAT 59.494 39.130 0.00 0.00 0.00 3.79
2468 2580 2.917701 TCGGCACAACAATTAGCATG 57.082 45.000 0.00 0.00 0.00 4.06
2469 2581 1.472082 TCGGCACAACAATTAGCATGG 59.528 47.619 0.00 0.00 0.00 3.66
2470 2582 1.202114 CGGCACAACAATTAGCATGGT 59.798 47.619 1.62 1.62 0.00 3.55
2471 2583 2.352617 CGGCACAACAATTAGCATGGTT 60.353 45.455 1.12 0.00 0.00 3.67
2472 2584 2.995258 GGCACAACAATTAGCATGGTTG 59.005 45.455 1.12 5.72 44.57 3.77
2473 2585 2.995258 GCACAACAATTAGCATGGTTGG 59.005 45.455 1.12 0.00 43.61 3.77
2474 2586 3.587923 CACAACAATTAGCATGGTTGGG 58.412 45.455 1.12 0.00 43.61 4.12
2475 2587 2.566724 ACAACAATTAGCATGGTTGGGG 59.433 45.455 1.12 0.00 43.61 4.96
2476 2588 1.194218 ACAATTAGCATGGTTGGGGC 58.806 50.000 1.12 0.00 0.00 5.80
2477 2589 1.273211 ACAATTAGCATGGTTGGGGCT 60.273 47.619 1.12 0.00 41.51 5.19
2478 2590 2.024464 ACAATTAGCATGGTTGGGGCTA 60.024 45.455 1.12 0.00 39.01 3.93
2480 2592 2.909504 TTAGCATGGTTGGGGCTAAA 57.090 45.000 1.12 0.00 44.52 1.85
2481 2593 2.137810 TAGCATGGTTGGGGCTAAAC 57.862 50.000 1.12 0.00 37.21 2.01
2482 2594 0.965363 AGCATGGTTGGGGCTAAACG 60.965 55.000 0.00 0.00 35.82 3.60
2483 2595 1.944234 GCATGGTTGGGGCTAAACGG 61.944 60.000 0.00 0.00 0.00 4.44
2484 2596 1.000145 ATGGTTGGGGCTAAACGGG 60.000 57.895 0.00 0.00 0.00 5.28
2485 2597 1.795951 ATGGTTGGGGCTAAACGGGT 61.796 55.000 0.00 0.00 0.00 5.28
2486 2598 1.676635 GGTTGGGGCTAAACGGGTC 60.677 63.158 0.00 0.00 0.00 4.46
2487 2599 1.073548 GTTGGGGCTAAACGGGTCA 59.926 57.895 0.00 0.00 0.00 4.02
2488 2600 0.323087 GTTGGGGCTAAACGGGTCAT 60.323 55.000 0.00 0.00 0.00 3.06
2489 2601 0.322997 TTGGGGCTAAACGGGTCATG 60.323 55.000 0.00 0.00 0.00 3.07
2490 2602 1.202099 TGGGGCTAAACGGGTCATGA 61.202 55.000 0.00 0.00 0.00 3.07
2491 2603 0.182775 GGGGCTAAACGGGTCATGAT 59.817 55.000 0.00 0.00 0.00 2.45
2492 2604 1.409661 GGGGCTAAACGGGTCATGATT 60.410 52.381 0.00 0.00 0.00 2.57
2493 2605 1.676006 GGGCTAAACGGGTCATGATTG 59.324 52.381 0.00 0.00 0.00 2.67
2494 2606 1.065551 GGCTAAACGGGTCATGATTGC 59.934 52.381 0.00 0.00 0.00 3.56
2495 2607 2.017049 GCTAAACGGGTCATGATTGCT 58.983 47.619 0.00 0.00 0.00 3.91
2496 2608 2.423538 GCTAAACGGGTCATGATTGCTT 59.576 45.455 0.00 0.00 0.00 3.91
2497 2609 3.119495 GCTAAACGGGTCATGATTGCTTT 60.119 43.478 0.00 0.00 0.00 3.51
2498 2610 3.302365 AAACGGGTCATGATTGCTTTG 57.698 42.857 0.00 0.00 0.00 2.77
2499 2611 1.176527 ACGGGTCATGATTGCTTTGG 58.823 50.000 0.00 0.00 0.00 3.28
2500 2612 1.176527 CGGGTCATGATTGCTTTGGT 58.823 50.000 0.00 0.00 0.00 3.67
2501 2613 1.135315 CGGGTCATGATTGCTTTGGTG 60.135 52.381 0.00 0.00 0.00 4.17
2502 2614 1.404583 GGGTCATGATTGCTTTGGTGC 60.405 52.381 0.00 0.00 0.00 5.01
2503 2615 1.547372 GGTCATGATTGCTTTGGTGCT 59.453 47.619 0.00 0.00 0.00 4.40
2504 2616 2.028748 GGTCATGATTGCTTTGGTGCTT 60.029 45.455 0.00 0.00 0.00 3.91
2505 2617 3.555586 GGTCATGATTGCTTTGGTGCTTT 60.556 43.478 0.00 0.00 0.00 3.51
2506 2618 3.430895 GTCATGATTGCTTTGGTGCTTTG 59.569 43.478 0.00 0.00 0.00 2.77
2507 2619 1.868469 TGATTGCTTTGGTGCTTTGC 58.132 45.000 0.00 0.00 0.00 3.68
2508 2620 1.413445 TGATTGCTTTGGTGCTTTGCT 59.587 42.857 0.00 0.00 0.00 3.91
2509 2621 2.627221 TGATTGCTTTGGTGCTTTGCTA 59.373 40.909 0.00 0.00 0.00 3.49
2510 2622 2.798976 TTGCTTTGGTGCTTTGCTAG 57.201 45.000 0.00 0.00 0.00 3.42
2511 2623 0.961019 TGCTTTGGTGCTTTGCTAGG 59.039 50.000 0.00 0.00 0.00 3.02
2512 2624 0.244721 GCTTTGGTGCTTTGCTAGGG 59.755 55.000 0.00 0.00 0.00 3.53
2513 2625 0.890683 CTTTGGTGCTTTGCTAGGGG 59.109 55.000 0.00 0.00 0.00 4.79
2514 2626 0.541764 TTTGGTGCTTTGCTAGGGGG 60.542 55.000 0.00 0.00 0.00 5.40
2515 2627 1.725169 TTGGTGCTTTGCTAGGGGGT 61.725 55.000 0.00 0.00 0.00 4.95
2516 2628 0.842905 TGGTGCTTTGCTAGGGGGTA 60.843 55.000 0.00 0.00 0.00 3.69
2517 2629 0.393944 GGTGCTTTGCTAGGGGGTAC 60.394 60.000 0.00 0.00 0.00 3.34
2518 2630 0.326927 GTGCTTTGCTAGGGGGTACA 59.673 55.000 0.00 0.00 0.00 2.90
2519 2631 0.618458 TGCTTTGCTAGGGGGTACAG 59.382 55.000 0.00 0.00 0.00 2.74
2520 2632 0.748367 GCTTTGCTAGGGGGTACAGC 60.748 60.000 0.00 0.00 35.82 4.40
2521 2633 0.618458 CTTTGCTAGGGGGTACAGCA 59.382 55.000 0.95 0.95 43.28 4.41
2522 2634 1.212935 CTTTGCTAGGGGGTACAGCAT 59.787 52.381 5.74 0.00 44.29 3.79
2523 2635 0.837272 TTGCTAGGGGGTACAGCATC 59.163 55.000 5.74 0.00 44.29 3.91
2524 2636 0.031111 TGCTAGGGGGTACAGCATCT 60.031 55.000 0.95 0.00 40.26 2.90
2525 2637 0.682292 GCTAGGGGGTACAGCATCTC 59.318 60.000 0.00 0.00 35.35 2.75
2526 2638 1.343069 CTAGGGGGTACAGCATCTCC 58.657 60.000 0.00 0.00 0.00 3.71
2527 2639 0.639943 TAGGGGGTACAGCATCTCCA 59.360 55.000 0.00 0.00 0.00 3.86
2528 2640 0.692419 AGGGGGTACAGCATCTCCAG 60.692 60.000 0.00 0.00 0.00 3.86
2529 2641 0.983378 GGGGGTACAGCATCTCCAGT 60.983 60.000 0.00 0.00 0.00 4.00
2530 2642 0.466124 GGGGTACAGCATCTCCAGTC 59.534 60.000 0.00 0.00 0.00 3.51
2531 2643 0.103208 GGGTACAGCATCTCCAGTCG 59.897 60.000 0.00 0.00 0.00 4.18
2532 2644 0.103208 GGTACAGCATCTCCAGTCGG 59.897 60.000 0.00 0.00 0.00 4.79
2533 2645 1.103803 GTACAGCATCTCCAGTCGGA 58.896 55.000 0.00 0.00 39.79 4.55
2534 2646 1.103803 TACAGCATCTCCAGTCGGAC 58.896 55.000 0.00 0.00 35.91 4.79
2535 2647 1.142748 CAGCATCTCCAGTCGGACC 59.857 63.158 4.14 0.00 35.91 4.46
2536 2648 2.060980 AGCATCTCCAGTCGGACCC 61.061 63.158 4.14 0.00 35.91 4.46
2537 2649 3.095347 GCATCTCCAGTCGGACCCC 62.095 68.421 4.14 0.00 35.91 4.95
2538 2650 1.381872 CATCTCCAGTCGGACCCCT 60.382 63.158 4.14 0.00 35.91 4.79
2539 2651 0.106167 CATCTCCAGTCGGACCCCTA 60.106 60.000 4.14 0.00 35.91 3.53
2540 2652 0.106116 ATCTCCAGTCGGACCCCTAC 60.106 60.000 4.14 0.00 35.91 3.18
2541 2653 1.212934 TCTCCAGTCGGACCCCTACT 61.213 60.000 4.14 0.00 35.91 2.57
2542 2654 0.549950 CTCCAGTCGGACCCCTACTA 59.450 60.000 4.14 0.00 35.91 1.82
2543 2655 0.257039 TCCAGTCGGACCCCTACTAC 59.743 60.000 4.14 0.00 35.91 2.73
2544 2656 1.099879 CCAGTCGGACCCCTACTACG 61.100 65.000 4.14 0.00 0.00 3.51
2545 2657 1.452833 AGTCGGACCCCTACTACGC 60.453 63.158 4.14 0.00 0.00 4.42
2546 2658 2.124151 TCGGACCCCTACTACGCC 60.124 66.667 0.00 0.00 0.00 5.68
2547 2659 3.222121 CGGACCCCTACTACGCCC 61.222 72.222 0.00 0.00 0.00 6.13
2548 2660 2.841516 GGACCCCTACTACGCCCC 60.842 72.222 0.00 0.00 0.00 5.80
2549 2661 2.042639 GACCCCTACTACGCCCCA 60.043 66.667 0.00 0.00 0.00 4.96
2550 2662 2.364710 ACCCCTACTACGCCCCAC 60.365 66.667 0.00 0.00 0.00 4.61
2551 2663 3.159347 CCCCTACTACGCCCCACC 61.159 72.222 0.00 0.00 0.00 4.61
2552 2664 3.159347 CCCTACTACGCCCCACCC 61.159 72.222 0.00 0.00 0.00 4.61
2553 2665 3.159347 CCTACTACGCCCCACCCC 61.159 72.222 0.00 0.00 0.00 4.95
2554 2666 3.159347 CTACTACGCCCCACCCCC 61.159 72.222 0.00 0.00 0.00 5.40
2555 2667 3.686854 TACTACGCCCCACCCCCT 61.687 66.667 0.00 0.00 0.00 4.79
2556 2668 3.256941 TACTACGCCCCACCCCCTT 62.257 63.158 0.00 0.00 0.00 3.95
2557 2669 2.769145 TACTACGCCCCACCCCCTTT 62.769 60.000 0.00 0.00 0.00 3.11
2558 2670 3.332385 TACGCCCCACCCCCTTTC 61.332 66.667 0.00 0.00 0.00 2.62
2560 2672 4.740822 CGCCCCACCCCCTTTCAG 62.741 72.222 0.00 0.00 0.00 3.02
2561 2673 3.264845 GCCCCACCCCCTTTCAGA 61.265 66.667 0.00 0.00 0.00 3.27
2562 2674 2.626467 GCCCCACCCCCTTTCAGAT 61.626 63.158 0.00 0.00 0.00 2.90
2563 2675 2.096168 CCCCACCCCCTTTCAGATT 58.904 57.895 0.00 0.00 0.00 2.40
2564 2676 0.413434 CCCCACCCCCTTTCAGATTT 59.587 55.000 0.00 0.00 0.00 2.17
2565 2677 1.560505 CCCACCCCCTTTCAGATTTG 58.439 55.000 0.00 0.00 0.00 2.32
2566 2678 1.560505 CCACCCCCTTTCAGATTTGG 58.439 55.000 0.00 0.00 0.00 3.28
2567 2679 1.560505 CACCCCCTTTCAGATTTGGG 58.439 55.000 0.00 0.00 39.37 4.12
2568 2680 0.252239 ACCCCCTTTCAGATTTGGGC 60.252 55.000 0.00 0.00 38.37 5.36
2569 2681 0.041684 CCCCCTTTCAGATTTGGGCT 59.958 55.000 0.00 0.00 38.37 5.19
2570 2682 1.188863 CCCCTTTCAGATTTGGGCTG 58.811 55.000 0.00 0.00 38.37 4.85
2571 2683 0.533951 CCCTTTCAGATTTGGGCTGC 59.466 55.000 0.00 0.00 33.45 5.25
2572 2684 0.533951 CCTTTCAGATTTGGGCTGCC 59.466 55.000 11.05 11.05 33.45 4.85
2573 2685 0.533951 CTTTCAGATTTGGGCTGCCC 59.466 55.000 30.97 30.97 45.71 5.36
2582 2694 3.792736 GGGCTGCCCGGACATGTA 61.793 66.667 24.16 0.00 32.13 2.29
2583 2695 2.513897 GGCTGCCCGGACATGTAC 60.514 66.667 7.66 0.00 0.00 2.90
2584 2696 2.267642 GCTGCCCGGACATGTACA 59.732 61.111 9.21 0.00 0.00 2.90
2585 2697 1.153168 GCTGCCCGGACATGTACAT 60.153 57.895 9.21 1.41 0.00 2.29
2586 2698 0.105964 GCTGCCCGGACATGTACATA 59.894 55.000 8.32 0.00 0.00 2.29
2587 2699 1.474320 GCTGCCCGGACATGTACATAA 60.474 52.381 8.32 0.00 0.00 1.90
2588 2700 2.210116 CTGCCCGGACATGTACATAAC 58.790 52.381 8.32 5.53 0.00 1.89
2589 2701 1.555533 TGCCCGGACATGTACATAACA 59.444 47.619 8.32 0.00 43.86 2.41
2591 2703 2.806244 GCCCGGACATGTACATAACATC 59.194 50.000 8.32 4.26 46.15 3.06
2592 2704 3.742954 GCCCGGACATGTACATAACATCA 60.743 47.826 8.32 0.00 46.15 3.07
2593 2705 4.641396 CCCGGACATGTACATAACATCAT 58.359 43.478 8.32 0.00 46.15 2.45
2594 2706 5.789521 CCCGGACATGTACATAACATCATA 58.210 41.667 8.32 0.00 46.15 2.15
2595 2707 6.406370 CCCGGACATGTACATAACATCATAT 58.594 40.000 8.32 0.00 46.15 1.78
2596 2708 6.535150 CCCGGACATGTACATAACATCATATC 59.465 42.308 8.32 0.00 46.15 1.63
2597 2709 7.323420 CCGGACATGTACATAACATCATATCT 58.677 38.462 8.32 0.00 46.15 1.98
2598 2710 8.466798 CCGGACATGTACATAACATCATATCTA 58.533 37.037 8.32 0.00 46.15 1.98
2599 2711 9.855021 CGGACATGTACATAACATCATATCTAA 57.145 33.333 8.32 0.00 46.15 2.10
2623 2735 7.966339 ACAGGTTAAATTAATCCTAAACCCC 57.034 36.000 13.43 3.93 37.65 4.95
2624 2736 7.715482 ACAGGTTAAATTAATCCTAAACCCCT 58.285 34.615 13.43 5.49 37.65 4.79
2625 2737 8.181524 ACAGGTTAAATTAATCCTAAACCCCTT 58.818 33.333 13.43 0.00 37.65 3.95
2626 2738 8.692710 CAGGTTAAATTAATCCTAAACCCCTTC 58.307 37.037 13.43 0.00 37.65 3.46
2627 2739 8.403474 AGGTTAAATTAATCCTAAACCCCTTCA 58.597 33.333 13.43 0.00 37.65 3.02
2628 2740 9.038072 GGTTAAATTAATCCTAAACCCCTTCAA 57.962 33.333 8.79 0.00 32.09 2.69
2632 2744 7.582667 ATTAATCCTAAACCCCTTCAAATCG 57.417 36.000 0.00 0.00 0.00 3.34
2633 2745 4.586306 ATCCTAAACCCCTTCAAATCGT 57.414 40.909 0.00 0.00 0.00 3.73
2634 2746 3.946606 TCCTAAACCCCTTCAAATCGTC 58.053 45.455 0.00 0.00 0.00 4.20
2635 2747 3.585732 TCCTAAACCCCTTCAAATCGTCT 59.414 43.478 0.00 0.00 0.00 4.18
2636 2748 4.042435 TCCTAAACCCCTTCAAATCGTCTT 59.958 41.667 0.00 0.00 0.00 3.01
2637 2749 4.395231 CCTAAACCCCTTCAAATCGTCTTC 59.605 45.833 0.00 0.00 0.00 2.87
2638 2750 3.502123 AACCCCTTCAAATCGTCTTCA 57.498 42.857 0.00 0.00 0.00 3.02
2639 2751 3.502123 ACCCCTTCAAATCGTCTTCAA 57.498 42.857 0.00 0.00 0.00 2.69
2640 2752 3.146847 ACCCCTTCAAATCGTCTTCAAC 58.853 45.455 0.00 0.00 0.00 3.18
2641 2753 2.488153 CCCCTTCAAATCGTCTTCAACC 59.512 50.000 0.00 0.00 0.00 3.77
2642 2754 2.488153 CCCTTCAAATCGTCTTCAACCC 59.512 50.000 0.00 0.00 0.00 4.11
2643 2755 3.412386 CCTTCAAATCGTCTTCAACCCT 58.588 45.455 0.00 0.00 0.00 4.34
2644 2756 3.821033 CCTTCAAATCGTCTTCAACCCTT 59.179 43.478 0.00 0.00 0.00 3.95
2645 2757 4.320494 CCTTCAAATCGTCTTCAACCCTTG 60.320 45.833 0.00 0.00 0.00 3.61
2646 2758 2.552315 TCAAATCGTCTTCAACCCTTGC 59.448 45.455 0.00 0.00 0.00 4.01
2647 2759 1.534729 AATCGTCTTCAACCCTTGCC 58.465 50.000 0.00 0.00 0.00 4.52
2648 2760 0.322546 ATCGTCTTCAACCCTTGCCC 60.323 55.000 0.00 0.00 0.00 5.36
2649 2761 1.073199 CGTCTTCAACCCTTGCCCT 59.927 57.895 0.00 0.00 0.00 5.19
2650 2762 0.323629 CGTCTTCAACCCTTGCCCTA 59.676 55.000 0.00 0.00 0.00 3.53
2651 2763 1.822506 GTCTTCAACCCTTGCCCTAC 58.177 55.000 0.00 0.00 0.00 3.18
2652 2764 1.073284 GTCTTCAACCCTTGCCCTACA 59.927 52.381 0.00 0.00 0.00 2.74
2653 2765 1.992557 TCTTCAACCCTTGCCCTACAT 59.007 47.619 0.00 0.00 0.00 2.29
2654 2766 2.094675 CTTCAACCCTTGCCCTACATG 58.905 52.381 0.00 0.00 0.00 3.21
2655 2767 0.323360 TCAACCCTTGCCCTACATGC 60.323 55.000 0.00 0.00 0.00 4.06
2656 2768 1.000359 AACCCTTGCCCTACATGCC 60.000 57.895 0.00 0.00 0.00 4.40
2657 2769 1.799157 AACCCTTGCCCTACATGCCA 61.799 55.000 0.00 0.00 0.00 4.92
2658 2770 1.231068 CCCTTGCCCTACATGCCAT 59.769 57.895 0.00 0.00 0.00 4.40
2659 2771 0.825010 CCCTTGCCCTACATGCCATC 60.825 60.000 0.00 0.00 0.00 3.51
2660 2772 0.184451 CCTTGCCCTACATGCCATCT 59.816 55.000 0.00 0.00 0.00 2.90
2661 2773 1.410648 CCTTGCCCTACATGCCATCTT 60.411 52.381 0.00 0.00 0.00 2.40
2662 2774 1.952296 CTTGCCCTACATGCCATCTTC 59.048 52.381 0.00 0.00 0.00 2.87
2663 2775 0.183492 TGCCCTACATGCCATCTTCC 59.817 55.000 0.00 0.00 0.00 3.46
2664 2776 0.475906 GCCCTACATGCCATCTTCCT 59.524 55.000 0.00 0.00 0.00 3.36
2665 2777 1.544314 GCCCTACATGCCATCTTCCTC 60.544 57.143 0.00 0.00 0.00 3.71
2666 2778 2.053244 CCCTACATGCCATCTTCCTCT 58.947 52.381 0.00 0.00 0.00 3.69
2667 2779 2.038295 CCCTACATGCCATCTTCCTCTC 59.962 54.545 0.00 0.00 0.00 3.20
2668 2780 2.971330 CCTACATGCCATCTTCCTCTCT 59.029 50.000 0.00 0.00 0.00 3.10
2669 2781 3.390639 CCTACATGCCATCTTCCTCTCTT 59.609 47.826 0.00 0.00 0.00 2.85
2670 2782 3.557228 ACATGCCATCTTCCTCTCTTC 57.443 47.619 0.00 0.00 0.00 2.87
2671 2783 3.113824 ACATGCCATCTTCCTCTCTTCT 58.886 45.455 0.00 0.00 0.00 2.85
2672 2784 3.522750 ACATGCCATCTTCCTCTCTTCTT 59.477 43.478 0.00 0.00 0.00 2.52
2673 2785 4.018597 ACATGCCATCTTCCTCTCTTCTTT 60.019 41.667 0.00 0.00 0.00 2.52
2674 2786 4.213564 TGCCATCTTCCTCTCTTCTTTC 57.786 45.455 0.00 0.00 0.00 2.62
2675 2787 3.843027 TGCCATCTTCCTCTCTTCTTTCT 59.157 43.478 0.00 0.00 0.00 2.52
2676 2788 4.081198 TGCCATCTTCCTCTCTTCTTTCTC 60.081 45.833 0.00 0.00 0.00 2.87
2677 2789 4.162131 GCCATCTTCCTCTCTTCTTTCTCT 59.838 45.833 0.00 0.00 0.00 3.10
2678 2790 5.682212 GCCATCTTCCTCTCTTCTTTCTCTC 60.682 48.000 0.00 0.00 0.00 3.20
2679 2791 5.658190 CCATCTTCCTCTCTTCTTTCTCTCT 59.342 44.000 0.00 0.00 0.00 3.10
2680 2792 6.833416 CCATCTTCCTCTCTTCTTTCTCTCTA 59.167 42.308 0.00 0.00 0.00 2.43
2681 2793 7.201821 CCATCTTCCTCTCTTCTTTCTCTCTAC 60.202 44.444 0.00 0.00 0.00 2.59
2682 2794 6.785076 TCTTCCTCTCTTCTTTCTCTCTACA 58.215 40.000 0.00 0.00 0.00 2.74
2683 2795 7.235079 TCTTCCTCTCTTCTTTCTCTCTACAA 58.765 38.462 0.00 0.00 0.00 2.41
2684 2796 7.893302 TCTTCCTCTCTTCTTTCTCTCTACAAT 59.107 37.037 0.00 0.00 0.00 2.71
2685 2797 7.403312 TCCTCTCTTCTTTCTCTCTACAATG 57.597 40.000 0.00 0.00 0.00 2.82
2686 2798 6.042143 CCTCTCTTCTTTCTCTCTACAATGC 58.958 44.000 0.00 0.00 0.00 3.56
2687 2799 5.971763 TCTCTTCTTTCTCTCTACAATGCC 58.028 41.667 0.00 0.00 0.00 4.40
2688 2800 5.091261 TCTTCTTTCTCTCTACAATGCCC 57.909 43.478 0.00 0.00 0.00 5.36
2689 2801 3.526931 TCTTTCTCTCTACAATGCCCG 57.473 47.619 0.00 0.00 0.00 6.13
2690 2802 2.832129 TCTTTCTCTCTACAATGCCCGT 59.168 45.455 0.00 0.00 0.00 5.28
2691 2803 4.021229 TCTTTCTCTCTACAATGCCCGTA 58.979 43.478 0.00 0.00 0.00 4.02
2692 2804 4.098044 TCTTTCTCTCTACAATGCCCGTAG 59.902 45.833 0.00 0.00 38.15 3.51
2693 2805 1.681793 TCTCTCTACAATGCCCGTAGC 59.318 52.381 0.00 0.00 44.14 3.58
2694 2806 0.750850 TCTCTACAATGCCCGTAGCC 59.249 55.000 0.00 0.00 42.71 3.93
2695 2807 0.464036 CTCTACAATGCCCGTAGCCA 59.536 55.000 0.00 0.00 42.71 4.75
2696 2808 0.906066 TCTACAATGCCCGTAGCCAA 59.094 50.000 0.00 0.00 42.71 4.52
2697 2809 1.134521 TCTACAATGCCCGTAGCCAAG 60.135 52.381 0.00 0.00 42.71 3.61
2698 2810 0.746563 TACAATGCCCGTAGCCAAGC 60.747 55.000 0.00 0.00 42.71 4.01
2699 2811 1.750399 CAATGCCCGTAGCCAAGCT 60.750 57.895 0.00 0.00 42.71 3.74
2700 2812 1.452108 AATGCCCGTAGCCAAGCTC 60.452 57.895 0.00 0.00 42.71 4.09
2701 2813 1.915078 AATGCCCGTAGCCAAGCTCT 61.915 55.000 0.00 0.00 42.71 4.09
2702 2814 2.512515 GCCCGTAGCCAAGCTCTG 60.513 66.667 0.00 0.00 40.44 3.35
2703 2815 3.019003 GCCCGTAGCCAAGCTCTGA 62.019 63.158 0.00 0.00 40.44 3.27
2704 2816 1.153549 CCCGTAGCCAAGCTCTGAC 60.154 63.158 0.00 0.00 40.44 3.51
2705 2817 1.517257 CCGTAGCCAAGCTCTGACG 60.517 63.158 3.94 3.94 40.44 4.35
2706 2818 2.161486 CGTAGCCAAGCTCTGACGC 61.161 63.158 0.00 0.00 40.44 5.19
2707 2819 1.216710 GTAGCCAAGCTCTGACGCT 59.783 57.895 0.00 0.00 43.31 5.07
2708 2820 1.080995 GTAGCCAAGCTCTGACGCTG 61.081 60.000 0.00 0.00 40.79 5.18
2709 2821 1.536073 TAGCCAAGCTCTGACGCTGT 61.536 55.000 0.00 0.00 40.79 4.40
2710 2822 2.675056 GCCAAGCTCTGACGCTGTG 61.675 63.158 0.00 0.00 40.79 3.66
2711 2823 1.301244 CCAAGCTCTGACGCTGTGT 60.301 57.895 0.00 0.00 40.79 3.72
2712 2824 0.882042 CCAAGCTCTGACGCTGTGTT 60.882 55.000 0.00 0.00 40.79 3.32
2713 2825 0.234106 CAAGCTCTGACGCTGTGTTG 59.766 55.000 0.00 0.00 40.79 3.33
2714 2826 0.104855 AAGCTCTGACGCTGTGTTGA 59.895 50.000 0.00 0.00 40.79 3.18
2715 2827 0.104855 AGCTCTGACGCTGTGTTGAA 59.895 50.000 0.00 0.00 39.16 2.69
2716 2828 0.233332 GCTCTGACGCTGTGTTGAAC 59.767 55.000 0.00 0.00 0.00 3.18
2717 2829 0.861837 CTCTGACGCTGTGTTGAACC 59.138 55.000 0.00 0.00 0.00 3.62
2718 2830 0.531974 TCTGACGCTGTGTTGAACCC 60.532 55.000 0.00 0.00 0.00 4.11
2719 2831 1.831389 CTGACGCTGTGTTGAACCCG 61.831 60.000 0.00 0.00 0.00 5.28
2720 2832 3.236618 GACGCTGTGTTGAACCCGC 62.237 63.158 0.00 0.00 0.00 6.13
2721 2833 4.368808 CGCTGTGTTGAACCCGCG 62.369 66.667 0.00 0.00 39.98 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 8.306761 CAAGCCTACTTAAAACAATTCTGGAAT 58.693 33.333 0.00 0.00 33.74 3.01
55 56 3.636153 ATGGTGAGAACCTTAAGCCTC 57.364 47.619 0.00 4.16 0.00 4.70
88 91 9.503427 CTCAAATAGGATTTTATTCGGTGTTTC 57.497 33.333 0.00 0.00 0.00 2.78
125 128 7.279313 GCAAAATGATATGGCAACTCAGAAAAT 59.721 33.333 8.13 0.00 37.61 1.82
133 136 4.708421 AGACAGCAAAATGATATGGCAACT 59.292 37.500 0.00 0.00 37.61 3.16
135 138 4.142116 CCAGACAGCAAAATGATATGGCAA 60.142 41.667 0.00 0.00 0.00 4.52
315 318 2.733026 ACCGAAGTTACATTTCGTTCCG 59.267 45.455 6.12 0.00 44.30 4.30
364 373 0.931005 GATGGCGACGAGAAATGGAC 59.069 55.000 0.00 0.00 0.00 4.02
372 413 4.530857 GGGGTGGATGGCGACGAG 62.531 72.222 0.00 0.00 0.00 4.18
383 424 4.351054 GTGGGAGCACTGGGGTGG 62.351 72.222 0.00 0.00 43.18 4.61
402 443 4.274459 GTGGCATGGTATCATTTCAGTCTC 59.726 45.833 0.00 0.00 0.00 3.36
403 444 4.202441 GTGGCATGGTATCATTTCAGTCT 58.798 43.478 0.00 0.00 0.00 3.24
404 445 3.947196 TGTGGCATGGTATCATTTCAGTC 59.053 43.478 0.00 0.00 0.00 3.51
405 446 3.966979 TGTGGCATGGTATCATTTCAGT 58.033 40.909 0.00 0.00 0.00 3.41
429 493 1.535204 GGATTGGTTGTGGCCTGTGG 61.535 60.000 3.32 0.00 0.00 4.17
430 494 1.535204 GGGATTGGTTGTGGCCTGTG 61.535 60.000 3.32 0.00 0.00 3.66
431 495 1.228862 GGGATTGGTTGTGGCCTGT 60.229 57.895 3.32 0.00 0.00 4.00
432 496 1.984026 GGGGATTGGTTGTGGCCTG 60.984 63.158 3.32 0.00 0.00 4.85
433 497 1.814292 ATGGGGATTGGTTGTGGCCT 61.814 55.000 3.32 0.00 0.00 5.19
434 498 1.306056 ATGGGGATTGGTTGTGGCC 60.306 57.895 0.00 0.00 0.00 5.36
454 518 0.036732 ATTCGTCCATGTGTGCCTGT 59.963 50.000 0.00 0.00 0.00 4.00
555 619 4.479993 GGCTCGGCTGTGGATGCT 62.480 66.667 0.00 0.00 0.00 3.79
658 722 3.330720 CGTGGAGGAAGGGGGCTT 61.331 66.667 0.00 0.00 0.00 4.35
710 774 0.807275 TTGATGGAGTCGCTGCGATG 60.807 55.000 28.51 0.00 38.42 3.84
755 819 2.032894 CCGATCCGATCCGATTTTTGTG 60.033 50.000 2.69 0.00 0.00 3.33
874 942 1.064017 GTAGTGCCATTCCCCAATCCA 60.064 52.381 0.00 0.00 0.00 3.41
875 943 1.215423 AGTAGTGCCATTCCCCAATCC 59.785 52.381 0.00 0.00 0.00 3.01
878 951 0.331278 CCAGTAGTGCCATTCCCCAA 59.669 55.000 0.00 0.00 0.00 4.12
891 964 3.130164 CACCTCTCAGTGATCACCAGTAG 59.870 52.174 22.21 14.11 40.34 2.57
916 992 0.976590 AACGGGGTAGGCTCTTCTCC 60.977 60.000 0.00 0.00 0.00 3.71
968 1047 1.066929 TGTCATGTCCATCCACTGACG 60.067 52.381 0.00 0.00 39.20 4.35
995 1074 4.265056 ACACGTGGGGTCCTTGGC 62.265 66.667 21.57 0.00 0.00 4.52
1002 1081 3.612681 CTCACCGACACGTGGGGT 61.613 66.667 23.13 23.13 34.36 4.95
1009 1088 1.227556 ACACAAGGCTCACCGACAC 60.228 57.895 0.00 0.00 42.76 3.67
1021 1100 2.095314 TGCACACACTGAAACACACAAG 60.095 45.455 0.00 0.00 0.00 3.16
1060 1139 4.394712 GGGGGACACCACAGCTCG 62.395 72.222 0.00 0.00 41.08 5.03
1110 1189 0.621280 TCCACCCAGCTCATCCATCA 60.621 55.000 0.00 0.00 0.00 3.07
1408 1489 2.820197 AGATACAGAGAACACAGACGCA 59.180 45.455 0.00 0.00 0.00 5.24
1515 1596 4.458397 AGATCAAATCCATGGCAGTACTG 58.542 43.478 18.93 18.93 0.00 2.74
1519 1600 4.458397 CAGTAGATCAAATCCATGGCAGT 58.542 43.478 6.96 0.00 0.00 4.40
1539 1620 0.108424 AACTCTTGCCGCTCTAGCAG 60.108 55.000 2.44 0.00 42.17 4.24
1540 1621 0.321671 AAACTCTTGCCGCTCTAGCA 59.678 50.000 2.44 0.00 42.21 3.49
1541 1622 1.003108 GAAACTCTTGCCGCTCTAGC 58.997 55.000 0.00 0.00 37.78 3.42
1568 1663 5.298527 TGATCATGTGAAGCAATCTTGATCC 59.701 40.000 17.43 8.63 38.03 3.36
1569 1664 6.183360 TGTGATCATGTGAAGCAATCTTGATC 60.183 38.462 0.00 15.46 38.59 2.92
1570 1665 5.650703 TGTGATCATGTGAAGCAATCTTGAT 59.349 36.000 0.00 0.00 31.48 2.57
1571 1666 5.005094 TGTGATCATGTGAAGCAATCTTGA 58.995 37.500 0.00 0.00 31.48 3.02
1572 1667 5.093457 GTGTGATCATGTGAAGCAATCTTG 58.907 41.667 0.00 0.00 31.48 3.02
1573 1668 4.763279 TGTGTGATCATGTGAAGCAATCTT 59.237 37.500 0.00 0.00 34.68 2.40
1574 1669 4.329392 TGTGTGATCATGTGAAGCAATCT 58.671 39.130 0.00 0.00 0.00 2.40
1645 1740 5.061933 GCTTTCGCTACAAAGTTACTCCTAC 59.938 44.000 0.00 0.00 36.00 3.18
1646 1741 5.047519 AGCTTTCGCTACAAAGTTACTCCTA 60.048 40.000 0.00 0.00 46.79 2.94
1647 1742 3.995048 GCTTTCGCTACAAAGTTACTCCT 59.005 43.478 0.00 0.00 36.00 3.69
1648 1743 3.995048 AGCTTTCGCTACAAAGTTACTCC 59.005 43.478 0.00 0.00 46.79 3.85
1703 1799 4.463186 GGGAGACGAGTACAATGGCTATAT 59.537 45.833 0.00 0.00 0.00 0.86
1758 1857 6.429692 ACATTCGTCAGATAACATCACCAAAA 59.570 34.615 0.00 0.00 0.00 2.44
1831 1943 6.927294 ATTTTTCGTTTAAAATTGCCACCA 57.073 29.167 0.00 0.00 36.94 4.17
1879 1991 8.907222 ATGCTAATTTCTTCAAAACCACATTT 57.093 26.923 0.00 0.00 0.00 2.32
2189 2301 9.416284 TGTTTTTCTTAAACATCCTTTACCTCT 57.584 29.630 0.00 0.00 35.45 3.69
2190 2302 9.459640 GTGTTTTTCTTAAACATCCTTTACCTC 57.540 33.333 6.38 0.00 41.51 3.85
2192 2304 9.244799 CTGTGTTTTTCTTAAACATCCTTTACC 57.755 33.333 6.38 0.00 41.51 2.85
2193 2305 9.797556 ACTGTGTTTTTCTTAAACATCCTTTAC 57.202 29.630 6.38 0.00 41.51 2.01
2221 2333 9.244799 CGTGTATACTATGAGCAACTTCAATTA 57.755 33.333 4.17 0.00 0.00 1.40
2256 2368 0.172578 TGTGAGTTCATACGGGCGAG 59.827 55.000 0.00 0.00 0.00 5.03
2259 2371 1.665679 CATGTGTGAGTTCATACGGGC 59.334 52.381 4.85 0.00 40.30 6.13
2262 2374 2.736192 TGTGCATGTGTGAGTTCATACG 59.264 45.455 0.00 0.00 40.30 3.06
2268 2380 0.183492 AGGGTGTGCATGTGTGAGTT 59.817 50.000 0.00 0.00 0.00 3.01
2269 2381 0.183492 AAGGGTGTGCATGTGTGAGT 59.817 50.000 0.00 0.00 0.00 3.41
2270 2382 0.594602 CAAGGGTGTGCATGTGTGAG 59.405 55.000 0.00 0.00 0.00 3.51
2271 2383 0.182299 TCAAGGGTGTGCATGTGTGA 59.818 50.000 0.00 0.00 0.00 3.58
2272 2384 0.594602 CTCAAGGGTGTGCATGTGTG 59.405 55.000 0.00 0.00 0.00 3.82
2273 2385 1.174712 GCTCAAGGGTGTGCATGTGT 61.175 55.000 0.00 0.00 42.56 3.72
2274 2386 1.174078 TGCTCAAGGGTGTGCATGTG 61.174 55.000 0.00 0.00 46.46 3.21
2275 2387 1.151221 TGCTCAAGGGTGTGCATGT 59.849 52.632 0.00 0.00 46.46 3.21
2276 2388 4.084265 TGCTCAAGGGTGTGCATG 57.916 55.556 0.00 0.00 46.46 4.06
2279 2391 1.109323 AAAGGTGCTCAAGGGTGTGC 61.109 55.000 0.00 0.00 43.17 4.57
2280 2392 0.670162 CAAAGGTGCTCAAGGGTGTG 59.330 55.000 0.00 0.00 0.00 3.82
2281 2393 0.550914 TCAAAGGTGCTCAAGGGTGT 59.449 50.000 0.00 0.00 0.00 4.16
2282 2394 1.202806 TCTCAAAGGTGCTCAAGGGTG 60.203 52.381 0.00 0.00 0.00 4.61
2283 2395 1.140312 TCTCAAAGGTGCTCAAGGGT 58.860 50.000 0.00 0.00 0.00 4.34
2284 2396 2.276732 TTCTCAAAGGTGCTCAAGGG 57.723 50.000 0.00 0.00 0.00 3.95
2285 2397 3.004106 CAGTTTCTCAAAGGTGCTCAAGG 59.996 47.826 0.00 0.00 0.00 3.61
2286 2398 3.879295 TCAGTTTCTCAAAGGTGCTCAAG 59.121 43.478 0.00 0.00 0.00 3.02
2287 2399 3.879295 CTCAGTTTCTCAAAGGTGCTCAA 59.121 43.478 0.00 0.00 0.00 3.02
2288 2400 3.134623 TCTCAGTTTCTCAAAGGTGCTCA 59.865 43.478 0.00 0.00 0.00 4.26
2289 2401 3.733337 TCTCAGTTTCTCAAAGGTGCTC 58.267 45.455 0.00 0.00 0.00 4.26
2290 2402 3.845781 TCTCAGTTTCTCAAAGGTGCT 57.154 42.857 0.00 0.00 0.00 4.40
2291 2403 4.130118 TCTTCTCAGTTTCTCAAAGGTGC 58.870 43.478 0.00 0.00 0.00 5.01
2292 2404 5.586243 TGTTCTTCTCAGTTTCTCAAAGGTG 59.414 40.000 0.00 0.00 0.00 4.00
2293 2405 5.745227 TGTTCTTCTCAGTTTCTCAAAGGT 58.255 37.500 0.00 0.00 0.00 3.50
2294 2406 6.347240 CGATGTTCTTCTCAGTTTCTCAAAGG 60.347 42.308 0.00 0.00 0.00 3.11
2295 2407 6.588552 CGATGTTCTTCTCAGTTTCTCAAAG 58.411 40.000 0.00 0.00 0.00 2.77
2296 2408 5.050091 GCGATGTTCTTCTCAGTTTCTCAAA 60.050 40.000 0.00 0.00 0.00 2.69
2297 2409 4.449068 GCGATGTTCTTCTCAGTTTCTCAA 59.551 41.667 0.00 0.00 0.00 3.02
2298 2410 3.990469 GCGATGTTCTTCTCAGTTTCTCA 59.010 43.478 0.00 0.00 0.00 3.27
2299 2411 3.060098 CGCGATGTTCTTCTCAGTTTCTC 59.940 47.826 0.00 0.00 0.00 2.87
2300 2412 2.989840 CGCGATGTTCTTCTCAGTTTCT 59.010 45.455 0.00 0.00 0.00 2.52
2301 2413 2.092838 CCGCGATGTTCTTCTCAGTTTC 59.907 50.000 8.23 0.00 0.00 2.78
2302 2414 2.069273 CCGCGATGTTCTTCTCAGTTT 58.931 47.619 8.23 0.00 0.00 2.66
2303 2415 1.673033 CCCGCGATGTTCTTCTCAGTT 60.673 52.381 8.23 0.00 0.00 3.16
2304 2416 0.108615 CCCGCGATGTTCTTCTCAGT 60.109 55.000 8.23 0.00 0.00 3.41
2305 2417 0.173481 TCCCGCGATGTTCTTCTCAG 59.827 55.000 8.23 0.00 0.00 3.35
2306 2418 0.824109 ATCCCGCGATGTTCTTCTCA 59.176 50.000 8.23 0.00 0.00 3.27
2307 2419 1.212616 CATCCCGCGATGTTCTTCTC 58.787 55.000 8.23 0.00 40.97 2.87
2308 2420 0.811616 GCATCCCGCGATGTTCTTCT 60.812 55.000 8.23 0.00 46.56 2.85
2309 2421 1.643832 GCATCCCGCGATGTTCTTC 59.356 57.895 8.23 0.00 46.56 2.87
2310 2422 1.819632 GGCATCCCGCGATGTTCTT 60.820 57.895 8.23 0.00 46.56 2.52
2311 2423 2.203070 GGCATCCCGCGATGTTCT 60.203 61.111 8.23 0.00 46.56 3.01
2312 2424 2.203070 AGGCATCCCGCGATGTTC 60.203 61.111 8.23 5.00 46.56 3.18
2313 2425 2.514592 CAGGCATCCCGCGATGTT 60.515 61.111 8.23 0.00 46.56 2.71
2314 2426 2.535485 TTTCAGGCATCCCGCGATGT 62.535 55.000 8.23 0.00 46.56 3.06
2316 2428 0.396435 TATTTCAGGCATCCCGCGAT 59.604 50.000 8.23 0.00 43.84 4.58
2317 2429 0.179234 TTATTTCAGGCATCCCGCGA 59.821 50.000 8.23 0.00 43.84 5.87
2318 2430 1.021202 TTTATTTCAGGCATCCCGCG 58.979 50.000 0.00 0.00 43.84 6.46
2319 2431 3.068024 TGAATTTATTTCAGGCATCCCGC 59.932 43.478 0.00 0.00 39.44 6.13
2320 2432 4.916983 TGAATTTATTTCAGGCATCCCG 57.083 40.909 0.00 0.00 39.44 5.14
2329 2441 7.862372 GCTCGCATTATTCCTGAATTTATTTCA 59.138 33.333 0.00 0.00 42.09 2.69
2330 2442 7.862372 TGCTCGCATTATTCCTGAATTTATTTC 59.138 33.333 0.00 0.00 34.72 2.17
2331 2443 7.649306 GTGCTCGCATTATTCCTGAATTTATTT 59.351 33.333 0.00 0.00 32.50 1.40
2332 2444 7.141363 GTGCTCGCATTATTCCTGAATTTATT 58.859 34.615 0.00 0.00 32.50 1.40
2333 2445 6.294176 GGTGCTCGCATTATTCCTGAATTTAT 60.294 38.462 0.00 0.00 32.50 1.40
2334 2446 5.008613 GGTGCTCGCATTATTCCTGAATTTA 59.991 40.000 0.00 0.00 32.50 1.40
2335 2447 4.202050 GGTGCTCGCATTATTCCTGAATTT 60.202 41.667 0.00 0.00 32.50 1.82
2336 2448 3.316308 GGTGCTCGCATTATTCCTGAATT 59.684 43.478 0.00 0.00 32.50 2.17
2337 2449 2.880890 GGTGCTCGCATTATTCCTGAAT 59.119 45.455 0.00 0.00 34.93 2.57
2338 2450 2.288666 GGTGCTCGCATTATTCCTGAA 58.711 47.619 0.00 0.00 0.00 3.02
2339 2451 1.209261 TGGTGCTCGCATTATTCCTGA 59.791 47.619 0.00 0.00 0.00 3.86
2340 2452 1.667236 TGGTGCTCGCATTATTCCTG 58.333 50.000 0.00 0.00 0.00 3.86
2341 2453 2.418368 TTGGTGCTCGCATTATTCCT 57.582 45.000 0.00 0.00 0.00 3.36
2342 2454 2.358898 ACATTGGTGCTCGCATTATTCC 59.641 45.455 0.00 0.00 0.00 3.01
2343 2455 3.065233 TGACATTGGTGCTCGCATTATTC 59.935 43.478 0.00 0.00 0.00 1.75
2344 2456 3.016031 TGACATTGGTGCTCGCATTATT 58.984 40.909 0.00 0.00 0.00 1.40
2345 2457 2.642427 TGACATTGGTGCTCGCATTAT 58.358 42.857 0.00 0.00 0.00 1.28
2346 2458 2.106477 TGACATTGGTGCTCGCATTA 57.894 45.000 0.00 0.00 0.00 1.90
2347 2459 1.200716 CTTGACATTGGTGCTCGCATT 59.799 47.619 0.00 0.00 0.00 3.56
2348 2460 0.806868 CTTGACATTGGTGCTCGCAT 59.193 50.000 0.00 0.00 0.00 4.73
2349 2461 0.534877 ACTTGACATTGGTGCTCGCA 60.535 50.000 0.00 0.00 0.00 5.10
2350 2462 0.593128 AACTTGACATTGGTGCTCGC 59.407 50.000 0.00 0.00 0.00 5.03
2351 2463 3.745975 TCTAAACTTGACATTGGTGCTCG 59.254 43.478 0.00 0.00 0.00 5.03
2352 2464 4.757149 AGTCTAAACTTGACATTGGTGCTC 59.243 41.667 0.00 0.00 36.94 4.26
2353 2465 4.718961 AGTCTAAACTTGACATTGGTGCT 58.281 39.130 0.00 0.00 36.94 4.40
2354 2466 5.438761 AAGTCTAAACTTGACATTGGTGC 57.561 39.130 0.00 0.00 44.13 5.01
2365 2477 6.183347 CCCATCAGGATTCAAGTCTAAACTT 58.817 40.000 0.00 0.00 41.97 2.66
2366 2478 5.749462 CCCATCAGGATTCAAGTCTAAACT 58.251 41.667 0.00 0.00 38.24 2.66
2367 2479 4.336713 GCCCATCAGGATTCAAGTCTAAAC 59.663 45.833 0.00 0.00 38.24 2.01
2368 2480 4.228210 AGCCCATCAGGATTCAAGTCTAAA 59.772 41.667 0.00 0.00 38.24 1.85
2369 2481 3.782523 AGCCCATCAGGATTCAAGTCTAA 59.217 43.478 0.00 0.00 38.24 2.10
2370 2482 3.387962 AGCCCATCAGGATTCAAGTCTA 58.612 45.455 0.00 0.00 38.24 2.59
2371 2483 2.203584 AGCCCATCAGGATTCAAGTCT 58.796 47.619 0.00 0.00 38.24 3.24
2372 2484 2.725221 AGCCCATCAGGATTCAAGTC 57.275 50.000 0.00 0.00 38.24 3.01
2373 2485 2.441001 CCTAGCCCATCAGGATTCAAGT 59.559 50.000 0.00 0.00 38.24 3.16
2374 2486 2.224719 CCCTAGCCCATCAGGATTCAAG 60.225 54.545 0.00 0.00 38.24 3.02
2375 2487 1.776667 CCCTAGCCCATCAGGATTCAA 59.223 52.381 0.00 0.00 38.24 2.69
2376 2488 1.061424 TCCCTAGCCCATCAGGATTCA 60.061 52.381 0.00 0.00 38.24 2.57
2377 2489 1.734655 TCCCTAGCCCATCAGGATTC 58.265 55.000 0.00 0.00 38.24 2.52
2378 2490 2.447582 ATCCCTAGCCCATCAGGATT 57.552 50.000 0.00 0.00 38.24 3.01
2379 2491 3.014458 TGATATCCCTAGCCCATCAGGAT 59.986 47.826 0.00 0.00 40.43 3.24
2380 2492 2.386811 TGATATCCCTAGCCCATCAGGA 59.613 50.000 0.00 0.00 38.24 3.86
2381 2493 2.503356 GTGATATCCCTAGCCCATCAGG 59.497 54.545 0.00 0.00 39.47 3.86
2382 2494 3.197333 CAGTGATATCCCTAGCCCATCAG 59.803 52.174 0.00 0.00 0.00 2.90
2383 2495 3.176411 CAGTGATATCCCTAGCCCATCA 58.824 50.000 0.00 0.00 0.00 3.07
2384 2496 3.177228 ACAGTGATATCCCTAGCCCATC 58.823 50.000 0.00 0.00 0.00 3.51
2385 2497 3.282135 ACAGTGATATCCCTAGCCCAT 57.718 47.619 0.00 0.00 0.00 4.00
2386 2498 2.795291 ACAGTGATATCCCTAGCCCA 57.205 50.000 0.00 0.00 0.00 5.36
2387 2499 3.243724 AGAACAGTGATATCCCTAGCCC 58.756 50.000 0.00 0.00 0.00 5.19
2388 2500 3.259625 GGAGAACAGTGATATCCCTAGCC 59.740 52.174 2.73 0.00 0.00 3.93
2389 2501 4.156477 AGGAGAACAGTGATATCCCTAGC 58.844 47.826 10.20 0.00 0.00 3.42
2390 2502 6.209788 GGTTAGGAGAACAGTGATATCCCTAG 59.790 46.154 10.20 0.00 0.00 3.02
2391 2503 6.075984 GGTTAGGAGAACAGTGATATCCCTA 58.924 44.000 10.20 8.60 0.00 3.53
2392 2504 4.902448 GGTTAGGAGAACAGTGATATCCCT 59.098 45.833 10.20 9.36 0.00 4.20
2393 2505 4.654262 TGGTTAGGAGAACAGTGATATCCC 59.346 45.833 10.20 0.00 0.00 3.85
2394 2506 5.871396 TGGTTAGGAGAACAGTGATATCC 57.129 43.478 5.96 5.96 0.00 2.59
2395 2507 6.042093 TGGATGGTTAGGAGAACAGTGATATC 59.958 42.308 0.00 0.00 0.00 1.63
2396 2508 5.905331 TGGATGGTTAGGAGAACAGTGATAT 59.095 40.000 0.00 0.00 0.00 1.63
2397 2509 5.277250 TGGATGGTTAGGAGAACAGTGATA 58.723 41.667 0.00 0.00 0.00 2.15
2398 2510 4.104086 TGGATGGTTAGGAGAACAGTGAT 58.896 43.478 0.00 0.00 0.00 3.06
2399 2511 3.516586 TGGATGGTTAGGAGAACAGTGA 58.483 45.455 0.00 0.00 0.00 3.41
2400 2512 3.981071 TGGATGGTTAGGAGAACAGTG 57.019 47.619 0.00 0.00 0.00 3.66
2401 2513 3.009143 GGTTGGATGGTTAGGAGAACAGT 59.991 47.826 0.00 0.00 0.00 3.55
2402 2514 3.009033 TGGTTGGATGGTTAGGAGAACAG 59.991 47.826 0.00 0.00 0.00 3.16
2403 2515 2.983192 TGGTTGGATGGTTAGGAGAACA 59.017 45.455 0.00 0.00 0.00 3.18
2404 2516 3.713826 TGGTTGGATGGTTAGGAGAAC 57.286 47.619 0.00 0.00 0.00 3.01
2405 2517 4.412199 CCTATGGTTGGATGGTTAGGAGAA 59.588 45.833 0.00 0.00 0.00 2.87
2406 2518 3.973973 CCTATGGTTGGATGGTTAGGAGA 59.026 47.826 0.00 0.00 0.00 3.71
2407 2519 3.716872 ACCTATGGTTGGATGGTTAGGAG 59.283 47.826 0.00 0.00 27.29 3.69
2408 2520 3.743132 ACCTATGGTTGGATGGTTAGGA 58.257 45.455 0.00 0.00 27.29 2.94
2409 2521 4.519906 AACCTATGGTTGGATGGTTAGG 57.480 45.455 0.71 0.00 45.07 2.69
2423 2535 7.495135 AGAAATTTTTGCAAACCAACCTATG 57.505 32.000 12.39 0.00 31.97 2.23
2424 2536 8.518430 AAAGAAATTTTTGCAAACCAACCTAT 57.482 26.923 12.39 0.00 31.97 2.57
2425 2537 7.201565 CGAAAGAAATTTTTGCAAACCAACCTA 60.202 33.333 12.39 0.00 31.97 3.08
2426 2538 6.403092 CGAAAGAAATTTTTGCAAACCAACCT 60.403 34.615 12.39 4.17 31.97 3.50
2427 2539 5.736824 CGAAAGAAATTTTTGCAAACCAACC 59.263 36.000 12.39 1.78 31.97 3.77
2428 2540 5.736824 CCGAAAGAAATTTTTGCAAACCAAC 59.263 36.000 12.39 3.14 31.97 3.77
2429 2541 5.674820 GCCGAAAGAAATTTTTGCAAACCAA 60.675 36.000 12.39 4.95 0.00 3.67
2430 2542 4.201861 GCCGAAAGAAATTTTTGCAAACCA 60.202 37.500 12.39 1.61 0.00 3.67
2431 2543 4.201861 TGCCGAAAGAAATTTTTGCAAACC 60.202 37.500 12.39 0.00 0.00 3.27
2432 2544 4.728131 GTGCCGAAAGAAATTTTTGCAAAC 59.272 37.500 12.39 0.00 0.00 2.93
2433 2545 4.393062 TGTGCCGAAAGAAATTTTTGCAAA 59.607 33.333 8.05 8.05 0.00 3.68
2434 2546 3.935203 TGTGCCGAAAGAAATTTTTGCAA 59.065 34.783 0.00 0.00 0.00 4.08
2435 2547 3.525537 TGTGCCGAAAGAAATTTTTGCA 58.474 36.364 0.00 0.00 0.00 4.08
2436 2548 4.201763 TGTTGTGCCGAAAGAAATTTTTGC 60.202 37.500 0.00 0.00 0.00 3.68
2437 2549 5.462034 TGTTGTGCCGAAAGAAATTTTTG 57.538 34.783 0.00 0.00 0.00 2.44
2438 2550 6.676237 ATTGTTGTGCCGAAAGAAATTTTT 57.324 29.167 0.00 0.00 0.00 1.94
2439 2551 6.676237 AATTGTTGTGCCGAAAGAAATTTT 57.324 29.167 0.00 0.00 0.00 1.82
2440 2552 6.073819 GCTAATTGTTGTGCCGAAAGAAATTT 60.074 34.615 0.00 0.00 0.00 1.82
2441 2553 5.405269 GCTAATTGTTGTGCCGAAAGAAATT 59.595 36.000 0.00 0.00 0.00 1.82
2442 2554 4.923281 GCTAATTGTTGTGCCGAAAGAAAT 59.077 37.500 0.00 0.00 0.00 2.17
2443 2555 4.202060 TGCTAATTGTTGTGCCGAAAGAAA 60.202 37.500 0.00 0.00 0.00 2.52
2444 2556 3.316588 TGCTAATTGTTGTGCCGAAAGAA 59.683 39.130 0.00 0.00 0.00 2.52
2445 2557 2.881513 TGCTAATTGTTGTGCCGAAAGA 59.118 40.909 0.00 0.00 0.00 2.52
2446 2558 3.281341 TGCTAATTGTTGTGCCGAAAG 57.719 42.857 0.00 0.00 0.00 2.62
2447 2559 3.573598 CATGCTAATTGTTGTGCCGAAA 58.426 40.909 0.00 0.00 0.00 3.46
2448 2560 2.094803 CCATGCTAATTGTTGTGCCGAA 60.095 45.455 0.00 0.00 0.00 4.30
2449 2561 1.472082 CCATGCTAATTGTTGTGCCGA 59.528 47.619 0.00 0.00 0.00 5.54
2450 2562 1.202114 ACCATGCTAATTGTTGTGCCG 59.798 47.619 0.00 0.00 0.00 5.69
2451 2563 2.995258 CAACCATGCTAATTGTTGTGCC 59.005 45.455 3.04 0.00 35.63 5.01
2452 2564 2.995258 CCAACCATGCTAATTGTTGTGC 59.005 45.455 8.73 0.00 37.61 4.57
2453 2565 3.587923 CCCAACCATGCTAATTGTTGTG 58.412 45.455 8.73 0.00 37.61 3.33
2454 2566 2.566724 CCCCAACCATGCTAATTGTTGT 59.433 45.455 8.73 0.00 37.61 3.32
2455 2567 2.677613 GCCCCAACCATGCTAATTGTTG 60.678 50.000 3.97 3.97 38.54 3.33
2456 2568 1.554617 GCCCCAACCATGCTAATTGTT 59.445 47.619 0.00 0.00 0.00 2.83
2457 2569 1.194218 GCCCCAACCATGCTAATTGT 58.806 50.000 0.00 0.00 0.00 2.71
2458 2570 1.488390 AGCCCCAACCATGCTAATTG 58.512 50.000 0.00 0.00 32.56 2.32
2459 2571 3.396685 TTAGCCCCAACCATGCTAATT 57.603 42.857 0.00 0.00 41.33 1.40
2460 2572 3.031013 GTTTAGCCCCAACCATGCTAAT 58.969 45.455 4.25 0.00 44.46 1.73
2461 2573 2.452505 GTTTAGCCCCAACCATGCTAA 58.547 47.619 0.00 0.00 43.68 3.09
2462 2574 1.680555 CGTTTAGCCCCAACCATGCTA 60.681 52.381 0.00 0.00 36.57 3.49
2463 2575 0.965363 CGTTTAGCCCCAACCATGCT 60.965 55.000 0.00 0.00 39.10 3.79
2464 2576 1.510844 CGTTTAGCCCCAACCATGC 59.489 57.895 0.00 0.00 0.00 4.06
2465 2577 1.319614 CCCGTTTAGCCCCAACCATG 61.320 60.000 0.00 0.00 0.00 3.66
2466 2578 1.000145 CCCGTTTAGCCCCAACCAT 60.000 57.895 0.00 0.00 0.00 3.55
2467 2579 2.414658 GACCCGTTTAGCCCCAACCA 62.415 60.000 0.00 0.00 0.00 3.67
2468 2580 1.676635 GACCCGTTTAGCCCCAACC 60.677 63.158 0.00 0.00 0.00 3.77
2469 2581 0.323087 ATGACCCGTTTAGCCCCAAC 60.323 55.000 0.00 0.00 0.00 3.77
2470 2582 0.322997 CATGACCCGTTTAGCCCCAA 60.323 55.000 0.00 0.00 0.00 4.12
2471 2583 1.202099 TCATGACCCGTTTAGCCCCA 61.202 55.000 0.00 0.00 0.00 4.96
2472 2584 0.182775 ATCATGACCCGTTTAGCCCC 59.817 55.000 0.00 0.00 0.00 5.80
2473 2585 1.676006 CAATCATGACCCGTTTAGCCC 59.324 52.381 0.00 0.00 0.00 5.19
2474 2586 1.065551 GCAATCATGACCCGTTTAGCC 59.934 52.381 0.00 0.00 0.00 3.93
2475 2587 2.017049 AGCAATCATGACCCGTTTAGC 58.983 47.619 0.00 0.00 0.00 3.09
2476 2588 4.414852 CAAAGCAATCATGACCCGTTTAG 58.585 43.478 0.00 0.00 0.00 1.85
2477 2589 3.192422 CCAAAGCAATCATGACCCGTTTA 59.808 43.478 0.00 0.00 0.00 2.01
2478 2590 2.029110 CCAAAGCAATCATGACCCGTTT 60.029 45.455 0.00 0.00 0.00 3.60
2479 2591 1.545582 CCAAAGCAATCATGACCCGTT 59.454 47.619 0.00 0.00 0.00 4.44
2480 2592 1.176527 CCAAAGCAATCATGACCCGT 58.823 50.000 0.00 0.00 0.00 5.28
2481 2593 1.135315 CACCAAAGCAATCATGACCCG 60.135 52.381 0.00 0.00 0.00 5.28
2482 2594 1.404583 GCACCAAAGCAATCATGACCC 60.405 52.381 0.00 0.00 0.00 4.46
2483 2595 1.547372 AGCACCAAAGCAATCATGACC 59.453 47.619 0.00 0.00 36.85 4.02
2484 2596 3.308438 AAGCACCAAAGCAATCATGAC 57.692 42.857 0.00 0.00 36.85 3.06
2485 2597 3.655486 CAAAGCACCAAAGCAATCATGA 58.345 40.909 0.00 0.00 36.85 3.07
2486 2598 2.158841 GCAAAGCACCAAAGCAATCATG 59.841 45.455 0.00 0.00 36.85 3.07
2487 2599 2.038033 AGCAAAGCACCAAAGCAATCAT 59.962 40.909 0.00 0.00 36.85 2.45
2488 2600 1.413445 AGCAAAGCACCAAAGCAATCA 59.587 42.857 0.00 0.00 36.85 2.57
2489 2601 2.159327 AGCAAAGCACCAAAGCAATC 57.841 45.000 0.00 0.00 36.85 2.67
2490 2602 2.028748 CCTAGCAAAGCACCAAAGCAAT 60.029 45.455 0.00 0.00 36.85 3.56
2491 2603 1.340889 CCTAGCAAAGCACCAAAGCAA 59.659 47.619 0.00 0.00 36.85 3.91
2492 2604 0.961019 CCTAGCAAAGCACCAAAGCA 59.039 50.000 0.00 0.00 36.85 3.91
2493 2605 0.244721 CCCTAGCAAAGCACCAAAGC 59.755 55.000 0.00 0.00 0.00 3.51
2494 2606 0.890683 CCCCTAGCAAAGCACCAAAG 59.109 55.000 0.00 0.00 0.00 2.77
2495 2607 0.541764 CCCCCTAGCAAAGCACCAAA 60.542 55.000 0.00 0.00 0.00 3.28
2496 2608 1.076549 CCCCCTAGCAAAGCACCAA 59.923 57.895 0.00 0.00 0.00 3.67
2497 2609 0.842905 TACCCCCTAGCAAAGCACCA 60.843 55.000 0.00 0.00 0.00 4.17
2498 2610 0.393944 GTACCCCCTAGCAAAGCACC 60.394 60.000 0.00 0.00 0.00 5.01
2499 2611 0.326927 TGTACCCCCTAGCAAAGCAC 59.673 55.000 0.00 0.00 0.00 4.40
2500 2612 0.618458 CTGTACCCCCTAGCAAAGCA 59.382 55.000 0.00 0.00 0.00 3.91
2501 2613 0.748367 GCTGTACCCCCTAGCAAAGC 60.748 60.000 0.00 0.00 37.40 3.51
2502 2614 0.618458 TGCTGTACCCCCTAGCAAAG 59.382 55.000 2.56 0.00 43.77 2.77
2503 2615 2.780264 TGCTGTACCCCCTAGCAAA 58.220 52.632 2.56 0.00 43.77 3.68
2504 2616 4.571236 TGCTGTACCCCCTAGCAA 57.429 55.556 2.56 0.00 43.77 3.91
2506 2618 0.682292 GAGATGCTGTACCCCCTAGC 59.318 60.000 0.00 0.00 37.93 3.42
2507 2619 1.343069 GGAGATGCTGTACCCCCTAG 58.657 60.000 0.00 0.00 0.00 3.02
2508 2620 0.639943 TGGAGATGCTGTACCCCCTA 59.360 55.000 0.00 0.00 0.00 3.53
2509 2621 0.692419 CTGGAGATGCTGTACCCCCT 60.692 60.000 0.00 0.00 0.00 4.79
2510 2622 0.983378 ACTGGAGATGCTGTACCCCC 60.983 60.000 0.00 0.00 0.00 5.40
2511 2623 0.466124 GACTGGAGATGCTGTACCCC 59.534 60.000 0.00 0.00 0.00 4.95
2512 2624 0.103208 CGACTGGAGATGCTGTACCC 59.897 60.000 0.00 0.00 0.00 3.69
2513 2625 0.103208 CCGACTGGAGATGCTGTACC 59.897 60.000 0.00 0.00 37.49 3.34
2514 2626 1.103803 TCCGACTGGAGATGCTGTAC 58.896 55.000 0.00 0.00 40.17 2.90
2515 2627 3.588742 TCCGACTGGAGATGCTGTA 57.411 52.632 0.00 0.00 40.17 2.74
2516 2628 4.442038 TCCGACTGGAGATGCTGT 57.558 55.556 0.00 0.00 40.17 4.40
2524 2636 0.257039 GTAGTAGGGGTCCGACTGGA 59.743 60.000 9.46 0.00 39.68 3.86
2525 2637 1.099879 CGTAGTAGGGGTCCGACTGG 61.100 65.000 9.46 0.00 39.68 4.00
2526 2638 1.722636 GCGTAGTAGGGGTCCGACTG 61.723 65.000 9.46 0.00 39.68 3.51
2527 2639 1.452833 GCGTAGTAGGGGTCCGACT 60.453 63.158 5.17 5.17 41.99 4.18
2528 2640 2.484928 GGCGTAGTAGGGGTCCGAC 61.485 68.421 0.00 0.00 0.00 4.79
2529 2641 2.124151 GGCGTAGTAGGGGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
2530 2642 3.222121 GGGCGTAGTAGGGGTCCG 61.222 72.222 0.00 0.00 0.00 4.79
2531 2643 2.841516 GGGGCGTAGTAGGGGTCC 60.842 72.222 0.00 0.00 0.00 4.46
2532 2644 2.042639 TGGGGCGTAGTAGGGGTC 60.043 66.667 0.00 0.00 0.00 4.46
2533 2645 2.364710 GTGGGGCGTAGTAGGGGT 60.365 66.667 0.00 0.00 0.00 4.95
2534 2646 3.159347 GGTGGGGCGTAGTAGGGG 61.159 72.222 0.00 0.00 0.00 4.79
2535 2647 3.159347 GGGTGGGGCGTAGTAGGG 61.159 72.222 0.00 0.00 0.00 3.53
2536 2648 3.159347 GGGGTGGGGCGTAGTAGG 61.159 72.222 0.00 0.00 0.00 3.18
2537 2649 3.159347 GGGGGTGGGGCGTAGTAG 61.159 72.222 0.00 0.00 0.00 2.57
2538 2650 2.769145 AAAGGGGGTGGGGCGTAGTA 62.769 60.000 0.00 0.00 0.00 1.82
2539 2651 4.669773 AAGGGGGTGGGGCGTAGT 62.670 66.667 0.00 0.00 0.00 2.73
2540 2652 3.335729 AAAGGGGGTGGGGCGTAG 61.336 66.667 0.00 0.00 0.00 3.51
2541 2653 3.332385 GAAAGGGGGTGGGGCGTA 61.332 66.667 0.00 0.00 0.00 4.42
2543 2655 4.740822 CTGAAAGGGGGTGGGGCG 62.741 72.222 0.00 0.00 0.00 6.13
2544 2656 2.168272 AATCTGAAAGGGGGTGGGGC 62.168 60.000 0.00 0.00 0.00 5.80
2545 2657 0.413434 AAATCTGAAAGGGGGTGGGG 59.587 55.000 0.00 0.00 0.00 4.96
2546 2658 1.560505 CAAATCTGAAAGGGGGTGGG 58.439 55.000 0.00 0.00 0.00 4.61
2547 2659 1.560505 CCAAATCTGAAAGGGGGTGG 58.439 55.000 0.00 0.00 0.00 4.61
2548 2660 1.560505 CCCAAATCTGAAAGGGGGTG 58.439 55.000 4.93 0.00 37.66 4.61
2549 2661 0.252239 GCCCAAATCTGAAAGGGGGT 60.252 55.000 12.50 0.00 41.75 4.95
2550 2662 0.041684 AGCCCAAATCTGAAAGGGGG 59.958 55.000 12.50 8.15 41.75 5.40
2551 2663 1.188863 CAGCCCAAATCTGAAAGGGG 58.811 55.000 12.50 9.64 41.75 4.79
2552 2664 0.533951 GCAGCCCAAATCTGAAAGGG 59.466 55.000 7.77 7.77 44.37 3.95
2553 2665 0.533951 GGCAGCCCAAATCTGAAAGG 59.466 55.000 0.00 0.00 33.54 3.11
2554 2666 0.533951 GGGCAGCCCAAATCTGAAAG 59.466 55.000 27.33 0.00 44.65 2.62
2555 2667 1.250154 CGGGCAGCCCAAATCTGAAA 61.250 55.000 30.86 0.00 45.83 2.69
2556 2668 1.678635 CGGGCAGCCCAAATCTGAA 60.679 57.895 30.86 0.00 45.83 3.02
2557 2669 2.045045 CGGGCAGCCCAAATCTGA 60.045 61.111 30.86 0.00 45.83 3.27
2558 2670 3.142838 CCGGGCAGCCCAAATCTG 61.143 66.667 30.86 12.54 45.83 2.90
2559 2671 3.338250 TCCGGGCAGCCCAAATCT 61.338 61.111 30.86 0.00 45.83 2.40
2560 2672 3.140814 GTCCGGGCAGCCCAAATC 61.141 66.667 30.86 13.20 45.83 2.17
2561 2673 3.301222 ATGTCCGGGCAGCCCAAAT 62.301 57.895 30.86 14.23 45.83 2.32
2562 2674 3.978193 ATGTCCGGGCAGCCCAAA 61.978 61.111 30.86 14.69 45.83 3.28
2563 2675 4.738998 CATGTCCGGGCAGCCCAA 62.739 66.667 30.86 15.10 45.83 4.12
2565 2677 3.792736 TACATGTCCGGGCAGCCC 61.793 66.667 22.33 22.33 41.09 5.19
2566 2678 2.513897 GTACATGTCCGGGCAGCC 60.514 66.667 16.89 1.26 0.00 4.85
2567 2679 0.105964 TATGTACATGTCCGGGCAGC 59.894 55.000 16.89 5.28 0.00 5.25
2568 2680 2.210116 GTTATGTACATGTCCGGGCAG 58.790 52.381 16.89 9.52 0.00 4.85
2569 2681 1.555533 TGTTATGTACATGTCCGGGCA 59.444 47.619 13.22 13.22 0.00 5.36
2570 2682 2.319136 TGTTATGTACATGTCCGGGC 57.681 50.000 18.81 0.00 0.00 6.13
2597 2709 9.478238 GGGGTTTAGGATTAATTTAACCTGTTA 57.522 33.333 15.06 0.00 36.24 2.41
2598 2710 8.181524 AGGGGTTTAGGATTAATTTAACCTGTT 58.818 33.333 15.06 0.00 36.24 3.16
2599 2711 7.715482 AGGGGTTTAGGATTAATTTAACCTGT 58.285 34.615 15.06 6.46 36.24 4.00
2600 2712 8.603898 AAGGGGTTTAGGATTAATTTAACCTG 57.396 34.615 15.06 0.00 36.24 4.00
2601 2713 8.403474 TGAAGGGGTTTAGGATTAATTTAACCT 58.597 33.333 15.48 12.12 36.24 3.50
2602 2714 8.598202 TGAAGGGGTTTAGGATTAATTTAACC 57.402 34.615 10.87 10.87 35.45 2.85
2606 2718 8.474831 CGATTTGAAGGGGTTTAGGATTAATTT 58.525 33.333 0.00 0.00 0.00 1.82
2607 2719 7.618117 ACGATTTGAAGGGGTTTAGGATTAATT 59.382 33.333 0.00 0.00 0.00 1.40
2608 2720 7.123383 ACGATTTGAAGGGGTTTAGGATTAAT 58.877 34.615 0.00 0.00 0.00 1.40
2609 2721 6.486941 ACGATTTGAAGGGGTTTAGGATTAA 58.513 36.000 0.00 0.00 0.00 1.40
2610 2722 6.069705 ACGATTTGAAGGGGTTTAGGATTA 57.930 37.500 0.00 0.00 0.00 1.75
2611 2723 4.930696 ACGATTTGAAGGGGTTTAGGATT 58.069 39.130 0.00 0.00 0.00 3.01
2612 2724 4.227527 AGACGATTTGAAGGGGTTTAGGAT 59.772 41.667 0.00 0.00 0.00 3.24
2613 2725 3.585732 AGACGATTTGAAGGGGTTTAGGA 59.414 43.478 0.00 0.00 0.00 2.94
2614 2726 3.951663 AGACGATTTGAAGGGGTTTAGG 58.048 45.455 0.00 0.00 0.00 2.69
2615 2727 5.001232 TGAAGACGATTTGAAGGGGTTTAG 58.999 41.667 0.00 0.00 0.00 1.85
2616 2728 4.975631 TGAAGACGATTTGAAGGGGTTTA 58.024 39.130 0.00 0.00 0.00 2.01
2617 2729 3.827722 TGAAGACGATTTGAAGGGGTTT 58.172 40.909 0.00 0.00 0.00 3.27
2618 2730 3.502123 TGAAGACGATTTGAAGGGGTT 57.498 42.857 0.00 0.00 0.00 4.11
2619 2731 3.146847 GTTGAAGACGATTTGAAGGGGT 58.853 45.455 0.00 0.00 0.00 4.95
2620 2732 2.488153 GGTTGAAGACGATTTGAAGGGG 59.512 50.000 0.00 0.00 0.00 4.79
2621 2733 2.488153 GGGTTGAAGACGATTTGAAGGG 59.512 50.000 0.00 0.00 0.00 3.95
2622 2734 3.412386 AGGGTTGAAGACGATTTGAAGG 58.588 45.455 0.00 0.00 0.00 3.46
2623 2735 4.787598 CAAGGGTTGAAGACGATTTGAAG 58.212 43.478 0.00 0.00 0.00 3.02
2624 2736 3.004315 GCAAGGGTTGAAGACGATTTGAA 59.996 43.478 0.00 0.00 0.00 2.69
2625 2737 2.552315 GCAAGGGTTGAAGACGATTTGA 59.448 45.455 0.00 0.00 0.00 2.69
2626 2738 2.351738 GGCAAGGGTTGAAGACGATTTG 60.352 50.000 0.00 0.00 0.00 2.32
2627 2739 1.886542 GGCAAGGGTTGAAGACGATTT 59.113 47.619 0.00 0.00 0.00 2.17
2628 2740 1.534729 GGCAAGGGTTGAAGACGATT 58.465 50.000 0.00 0.00 0.00 3.34
2629 2741 0.322546 GGGCAAGGGTTGAAGACGAT 60.323 55.000 0.00 0.00 0.00 3.73
2630 2742 1.072505 GGGCAAGGGTTGAAGACGA 59.927 57.895 0.00 0.00 0.00 4.20
2631 2743 0.323629 TAGGGCAAGGGTTGAAGACG 59.676 55.000 0.00 0.00 0.00 4.18
2632 2744 1.073284 TGTAGGGCAAGGGTTGAAGAC 59.927 52.381 0.00 0.00 0.00 3.01
2633 2745 1.440618 TGTAGGGCAAGGGTTGAAGA 58.559 50.000 0.00 0.00 0.00 2.87
2634 2746 2.094675 CATGTAGGGCAAGGGTTGAAG 58.905 52.381 0.00 0.00 0.00 3.02
2635 2747 1.890573 GCATGTAGGGCAAGGGTTGAA 60.891 52.381 0.00 0.00 0.00 2.69
2636 2748 0.323360 GCATGTAGGGCAAGGGTTGA 60.323 55.000 0.00 0.00 0.00 3.18
2637 2749 1.322538 GGCATGTAGGGCAAGGGTTG 61.323 60.000 0.00 0.00 0.00 3.77
2638 2750 1.000359 GGCATGTAGGGCAAGGGTT 60.000 57.895 0.00 0.00 0.00 4.11
2639 2751 2.237965 TGGCATGTAGGGCAAGGGT 61.238 57.895 0.00 0.00 40.73 4.34
2640 2752 2.682846 TGGCATGTAGGGCAAGGG 59.317 61.111 0.00 0.00 40.73 3.95
2645 2757 0.475906 AGGAAGATGGCATGTAGGGC 59.524 55.000 3.81 0.00 0.00 5.19
2646 2758 2.038295 GAGAGGAAGATGGCATGTAGGG 59.962 54.545 3.81 0.00 0.00 3.53
2647 2759 2.971330 AGAGAGGAAGATGGCATGTAGG 59.029 50.000 3.81 0.00 0.00 3.18
2648 2760 4.344679 AGAAGAGAGGAAGATGGCATGTAG 59.655 45.833 3.81 0.00 0.00 2.74
2649 2761 4.293494 AGAAGAGAGGAAGATGGCATGTA 58.707 43.478 3.81 0.00 0.00 2.29
2650 2762 3.113824 AGAAGAGAGGAAGATGGCATGT 58.886 45.455 3.81 0.00 0.00 3.21
2651 2763 3.842007 AGAAGAGAGGAAGATGGCATG 57.158 47.619 3.81 0.00 0.00 4.06
2652 2764 4.474287 AGAAAGAAGAGAGGAAGATGGCAT 59.526 41.667 0.00 0.00 0.00 4.40
2653 2765 3.843027 AGAAAGAAGAGAGGAAGATGGCA 59.157 43.478 0.00 0.00 0.00 4.92
2654 2766 4.162131 AGAGAAAGAAGAGAGGAAGATGGC 59.838 45.833 0.00 0.00 0.00 4.40
2655 2767 5.658190 AGAGAGAAAGAAGAGAGGAAGATGG 59.342 44.000 0.00 0.00 0.00 3.51
2656 2768 6.780457 AGAGAGAAAGAAGAGAGGAAGATG 57.220 41.667 0.00 0.00 0.00 2.90
2657 2769 7.410174 TGTAGAGAGAAAGAAGAGAGGAAGAT 58.590 38.462 0.00 0.00 0.00 2.40
2658 2770 6.785076 TGTAGAGAGAAAGAAGAGAGGAAGA 58.215 40.000 0.00 0.00 0.00 2.87
2659 2771 7.461182 TTGTAGAGAGAAAGAAGAGAGGAAG 57.539 40.000 0.00 0.00 0.00 3.46
2660 2772 7.578571 GCATTGTAGAGAGAAAGAAGAGAGGAA 60.579 40.741 0.00 0.00 0.00 3.36
2661 2773 6.127479 GCATTGTAGAGAGAAAGAAGAGAGGA 60.127 42.308 0.00 0.00 0.00 3.71
2662 2774 6.042143 GCATTGTAGAGAGAAAGAAGAGAGG 58.958 44.000 0.00 0.00 0.00 3.69
2663 2775 6.042143 GGCATTGTAGAGAGAAAGAAGAGAG 58.958 44.000 0.00 0.00 0.00 3.20
2664 2776 5.105146 GGGCATTGTAGAGAGAAAGAAGAGA 60.105 44.000 0.00 0.00 0.00 3.10
2665 2777 5.115480 GGGCATTGTAGAGAGAAAGAAGAG 58.885 45.833 0.00 0.00 0.00 2.85
2666 2778 4.382040 CGGGCATTGTAGAGAGAAAGAAGA 60.382 45.833 0.00 0.00 0.00 2.87
2667 2779 3.868077 CGGGCATTGTAGAGAGAAAGAAG 59.132 47.826 0.00 0.00 0.00 2.85
2668 2780 3.260884 ACGGGCATTGTAGAGAGAAAGAA 59.739 43.478 0.00 0.00 0.00 2.52
2669 2781 2.832129 ACGGGCATTGTAGAGAGAAAGA 59.168 45.455 0.00 0.00 0.00 2.52
2670 2782 3.252974 ACGGGCATTGTAGAGAGAAAG 57.747 47.619 0.00 0.00 0.00 2.62
2671 2783 3.430374 GCTACGGGCATTGTAGAGAGAAA 60.430 47.826 13.01 0.00 41.44 2.52
2672 2784 2.100916 GCTACGGGCATTGTAGAGAGAA 59.899 50.000 13.01 0.00 41.44 2.87
2673 2785 1.681793 GCTACGGGCATTGTAGAGAGA 59.318 52.381 13.01 0.00 41.44 3.10
2674 2786 1.269831 GGCTACGGGCATTGTAGAGAG 60.270 57.143 13.01 0.00 41.44 3.20
2675 2787 0.750850 GGCTACGGGCATTGTAGAGA 59.249 55.000 13.01 0.00 41.44 3.10
2676 2788 0.464036 TGGCTACGGGCATTGTAGAG 59.536 55.000 13.01 0.00 43.20 2.43
2677 2789 2.597995 TGGCTACGGGCATTGTAGA 58.402 52.632 13.01 0.00 43.20 2.59
2684 2796 3.003173 AGAGCTTGGCTACGGGCA 61.003 61.111 5.12 0.00 46.41 5.36
2685 2797 2.512515 CAGAGCTTGGCTACGGGC 60.513 66.667 0.00 0.00 39.88 6.13
2686 2798 1.153549 GTCAGAGCTTGGCTACGGG 60.154 63.158 0.00 0.00 39.88 5.28
2687 2799 1.517257 CGTCAGAGCTTGGCTACGG 60.517 63.158 5.70 0.00 39.88 4.02
2688 2800 2.161486 GCGTCAGAGCTTGGCTACG 61.161 63.158 8.39 8.39 39.88 3.51
2689 2801 1.080995 CAGCGTCAGAGCTTGGCTAC 61.081 60.000 0.00 0.00 46.80 3.58
2690 2802 1.216444 CAGCGTCAGAGCTTGGCTA 59.784 57.895 0.00 0.00 46.80 3.93
2691 2803 2.047465 CAGCGTCAGAGCTTGGCT 60.047 61.111 0.00 0.00 46.80 4.75
2692 2804 2.358003 ACAGCGTCAGAGCTTGGC 60.358 61.111 0.00 0.00 46.80 4.52
2693 2805 0.882042 AACACAGCGTCAGAGCTTGG 60.882 55.000 0.00 0.00 46.80 3.61
2694 2806 0.234106 CAACACAGCGTCAGAGCTTG 59.766 55.000 0.00 0.00 46.80 4.01
2695 2807 0.104855 TCAACACAGCGTCAGAGCTT 59.895 50.000 0.00 0.00 46.80 3.74
2697 2809 0.233332 GTTCAACACAGCGTCAGAGC 59.767 55.000 0.00 0.00 37.41 4.09
2698 2810 0.861837 GGTTCAACACAGCGTCAGAG 59.138 55.000 0.00 0.00 0.00 3.35
2699 2811 0.531974 GGGTTCAACACAGCGTCAGA 60.532 55.000 0.00 0.00 0.00 3.27
2700 2812 1.831389 CGGGTTCAACACAGCGTCAG 61.831 60.000 0.00 0.00 0.00 3.51
2701 2813 1.885388 CGGGTTCAACACAGCGTCA 60.885 57.895 0.00 0.00 0.00 4.35
2702 2814 2.935955 CGGGTTCAACACAGCGTC 59.064 61.111 0.00 0.00 0.00 5.19
2703 2815 3.276846 GCGGGTTCAACACAGCGT 61.277 61.111 0.00 0.00 0.00 5.07
2704 2816 4.368808 CGCGGGTTCAACACAGCG 62.369 66.667 13.16 13.16 44.04 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.