>input_sequence_70673
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--------------------------------------GGACCCCACGTGTCGGTGAGCCTTGTGTGTTTCAGTGTGTGC
ATAGTTTGCAACTCCCACCGAGCTGTGGTGTCCCCCAAATAACCTAGCGGCGGCGGCGGCGGCGGCGGTGATGGATGAGC
TGGGTGGAGGCGGCGGGAAGAAGGGCAAGGCATGGCCCTGGTGGCTTGGAGCGAGTGCGGCCCAGATCACCGGCGCGCTG
GTTTGGTTCCGGCGAGGCAAGGGCGGCAGCGACATGACGATGCCGTTCAGGGCGTTCGCCGTCGCCTCGCTCTTCGTCGG
CGCCGGCGCCACGACCGTCACCGCCGGAGTGTCCGCGGCGGGCGTCGGATCGGTAAGTCGCCGGAGCCAAAACCCCCCGC
ATCCGTGTGACGGATTCTCGATCTGGATGCGGCAAAT--TTTACACCGTGCGTCTGTGTTCTCTGTATCTGCAGGTGGAG
GAGATGAAGGGCTTGGGCGCGAGGATCCGGAAGTGGAGCAGAGTTCCTCCTCGCCGGGTGGAGGGAGGCGAGTAGCAGTA
CTGCCATGGATTTGATCTACTG--------------CTAGAGCGGCAAGAGTTTCCATGTGAGGATCAAGATTGCTTCAC
ATGATCACACATTTGGGAGATGCAAATCAATAATCACATCTGTACTGTACTACTACTCTGTAGGAGTAACTTTGTAGCGA
AAGCTT-GTTTACTCGAATTTTGATCCTGCCTTCTGGAATATAGCCATTGTACTCGT-----------------------
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>chr2A_1_TraesCS2A01G415500
AAAGAATTAAGTTTATTCCAGAATTGTTTTAAGTAGGCTTGCAAAATCCAGTAGTGAGGCTTAAGGTTCTCACCATAAAA
--AAAGTATTGAAACACCGAATAAAATCCTATTTGAGCTATTGATTTATTTTCTGAGTTGCCATATCATTTTGCTGTCTG
GTACCTGCAAGTATGTTCATCAGAGATTTTATTTTTTTCTTGTATGCAAACCCATTTATAGGCTTGCTTACAGAATAATT
GGTCAGAATCCCTGGTTTCTATGTAAGCAAGCCTCTGGGAGTTGCAACCGGAAAAATATCATATCAATCAACCTCCCCGG
AACGAAA------TGTAACTTCGGTATTATAAATATCGGTTTTAGCAGGTATGTC-------------------------
-------CATTTCTCGTCGCCATCCACCCCAGTGCTCCCACTGAGAC-----------------------TGAAATGATA
CCATGCCACAAGCCACAGGCCACAACCAATCCCCATCACAGGCACACATGGACGAATTGTACAGAGAAGGACGGCAGCAA
GCAACTGACCTGTGCCATCGCAGCGGAGCTCCTCGCAGGCGGAGCAGCCAGCGACGACAGCATCCACAGCCGAGCCCCCT
GCGCCACCGGTTTTCACCACGTCCCACGCCGCCCTGACCGCCTCCCGGAACGGCCAGGTGCTCACCACCACCGGAAACAC
GAAGCCCCCTTCCTCCACGCCTCCGCCATCCACGGCCTGGTTCAAAATCCCCCCATCGCAGCGACTCCATCAACGATAAC
ACGAACAAAATCGACCTGCACAAAAATCGGATCGGATCGGATCAACGACTCACCACGCACCAGGTGAGCCGCAGCAGCAG
GAGCCCCAGGAGAAGCCCCGGGTTGCTCCGAGCCATGGAAGCTGGG----CGGTTGAGGTGTG-----GATTGGGGAATG
GCAC---TACTGGTGATCACTGAGAGGTGGGGGAGAAG--AGCCTACCCCGTTATGTTGGG-GGTGAACTGGCAACGGGT
CCCACACGTCAGTGGATGGACATGACACGGCCTGCCAAGGACCCCACGTGTCGGTGAGCCTTGTGTGTTTCAGTGTGTGC
ATAGTTTGCAACTCCCACCGAGCTGTGGTGTCCCCCAAATAACCTAGCGGCGGCGGCGGCGGCGGCGGTGATGGATGAGC
TGGGTGGAGGCGGCGGGAAGAAGGGCAAGGCATGGCCCTGGTGGCTTGGAGCGAGTGCGGCCCAGATCACCGGCGCGCTG
GTTTGGTTCCGGCGAGGCAAGGGCGGCAGCGACATGACGATGCCGTTCAGGGCGTTCGCCGTCGCCTCGCTCTTCGTCGG
CGCCGGCGCCACGACCGTCACCGCCGGAGTGTCCGCGGCGGGCGTCGGATCGGTAAGTCGCCGGAGCCAAAACCCCCCGC
ATCCGTGTGACGGATTCTCGATCTGGATGCGGCAAAT--TTTACACCGTGCGTCTGTGTTCTCTGTATCTGCAGGTGGAG
GAGATGAAGGGCTTGGGCGCGAGGATCCGGAAGTGGAGCAGAGTTCCTCCTCGCCGGGTGGAGGGAGGCGAGTAGCAGTA
CTGCCATGGATTTGATCTACTG--------------CTAGAGCGGCAAGAGTTTCCATGTGAGGATCAAGATTGCTTCAC
ATGATCACACATTTGGGAGATGCAAATCAATAATCACATCTGTACTGTACTACTACTCTGTAGGAGTAACTTTGTAGCGA
AAGCTT-GTTTACTCGAATTTTGATCCTGCCTTCTGGAATATAGCCATTGTACTCGTCTCCCAGATTGAAAC---TGAAA
CTGCTTGTTTAAATTTTTTTGGTGATGTTATCTGACGAATGTCAGCCGGAAAGGGGT-------------TTGTTTCCTC
ACAGTTGCTTCGCGAGATCAGATGGTGGCAATTTTAAACGAAAAATACCTTCTTGTCATTTCCTCCTAGCAAATGTGGTT
TTGAAGAAATTAGCATTCCCTCACGGTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTAAGAGGGTCCTAAATTTTAGTGAAATCCTTTTTTTAATAGAGGTAAAGGATGTTTAAG
AAAAACACAGTATAATTGAAGTTGCTCATAGTATACACGAGCATACACTCGCCCGTATGAACTCACACATGCACACCCTT
GAGCACCTTTGAGAAACTGAGAAGAACATCGCGGGATGCCTGAAATAAATTCAGGAATAATGCGAGCACCAATGTCAAGT
TTAGACTTGAATCCTGATGGGCTAGGGATATCACTGTTCTCCTAACCATCCAACCATAGGTTGGTTTGCAAAAATTTCTT
TCGGCACAACAATTAGCATGGTTGGGGCTAAACGGGTCATGATTGCTTTGGTGCTTTGCTAGGGGGTACAGCATCTCCAG
TCGGACCCCTACTACGCCCCACCCCCTTTCAGATTTGGGCTGCCCGGACATGTACATAACATCATATCTAACAGGTTAAA
TTAATCCTAAACCCCTTCAAATCGTCTTCAACCCTTGCCCTACATGCCATCTTCCTCTCTTCTTTCTCTCTACAATGCCC
GTAGCCAAGCTCTGACGCTGTGTTGAACCCGCG
>chr2B_1
AAAGGATTAAGTTTCTTCCAGAATTGTTTTAAGTAGGCTTGCAAAATCCAGTAGTAAGGCTTAAGGTTCTCACCATAAAA
--AAAGTATTAAAACACCGAATAAAATCCTATTTGAGCTATTGAATTTTTTTCTGTGATGTCATGTCATTTTGCTGTCTG
GTACCTGCAAGTATGTTCATCAGAGAT-------TTTTCTTGTATGCAAGCCCATATATAGGCTTGCTTACAGAATAATT
GGTCAAAATCCCTGGTTTCTGTGTAAGCAAGCCTCTGGGAGTTGCCACCGGAAAAATATCATATCAATCAACCTCCCGGG
AATGAAATAATTTTGTAACTTCGGT----TAAATATCGGTTTTAGCAGGTACTTCCACTCTAGTTTGACCACTGCACCAG
CATAATTCATTTATCGTCGCCATTCACCCCAGTGCTCCCACT-----------------------AAAATTGAAATGATA
GCATGCCACAA-------GCCACAACCAATCCCCATCGCAGGCACACATGGACGAATTGTACAGAGAAGGACGGCAGCAA
GCAACTGACCTGTGCCATCGCAGCGGAGCTCCTCGCAGGCGGAGCAGCCAGCGACGACGGCATCCACAGCCGACCCCCCT
GCGCCGCCGGTTTTCACCACGTCCCACGCCGCCCTGACCGCCTCCCGGAACGGCCAGGTGCTCACCACCACCGGAAACAC
GCCGCCCCCTTCCTCCGCGCCTCCGCCATCCACGGCCTGGGTTAAAATTCCCCAATCGCAGCGACTCCATCAACGATAAC
ACGAACAAAATCGACCTGTGCAAAAATTGGATCGGATCGGATCAACGACTCACCAAGCACCAATTGAGCCGCAGCAGCAG
GAGCCCCAGGAGAAGCCCCGGGTTGCTCCGAGCCATGGAAGCTGGGGAGGCGGTTGAGGCGGATTGGGGAA-------TG
GCAGTACTACTGGTGATCACTGAGAGGTGGGAGAGAAG--AACCTACCCCGTTATGCTGGA-GGTGAACTGGCAACGGGT
CCCACATGTCAGTGGATGGACATGACACGGCCTACCAAGGGCCCCACATGTCGGTGAGCATTGTGCGTTTCAGTGTGTGC
ATACTTTGCAACTCCCACAGAGCTGTGGTGTCCCCCACATAACCTAGCGGCGGCGGCGGCGGCGGCGGCGATGGATGAGC
TGGGTGCAGGCGCCGGGAAGAAGGGCAAGGCATGGCCCTGGTGGCTTGGAGCGAGTGCAGCGCAGATCACCGGCGCGCTG
GTTTGGTTCCGGCGAGGCAAGGGCGGCAGCGACATGACGATGCCGTTCAGAGCGTTCGCCGTCGCCTCGCTCTTCGTCGG
CGCCGGCGCCACGACCGTCACCGCCGGAGTGTCCGCGGCGGGCGTCGGATCGGTAAGTCGCCGGAGCCAAAACACCTCGC
ATCCGTGCGACGGATTCTCGATCTGGACGCGGCAAAT--TTTACACCGCGCGTCTCTGTT-TCTGCATCTGCAGGTGGAG
GAGATGAAGGGCTTGGGCGCGAGGATCCGGAAGTGGAGCAGAGTTCCTCCTCGCCGGGTGGAGGGAGGCGAGTAGTAGTG
CTGCCATGGATTTGATCTAGGAAACTACTGTACTTACTAGAGTGGCAAGAGTTTCCATGTGATCTG---GATTGCTTCAC
ATGATCACACATTTGGGAGATGCAAAGCAATAATCACATCTGTACCGTACTATTGTTCT------GTAACGTTGTAGCGA
AAGCTTTGTTTGCTCGAATTTTGATCCTGCCCTGTGGACGATAGCCATTGTACTCGTCTCCCAGATGGAAACTTGTGAAA
CTGCTTGTTTAAATCTC-TTGGTAATGTTATCTAACGAATGTCAGCCGGAAAGGGGTTGACAAGCTAACGTTGTTTCCTC
ACAGTTGCTTCGCGAGATCAGACGGTGACAATTCTAAACGAAAAATACCTTCTTGTCATTTCCTCCTATTGAATGTGGTT
TTGAAGAAATTAGCATTCCCTCACGGTTAAAATTGTCAGCGAAATCGTTTGAAATATCACCCCCACCCCCTCCCCCTACT
AGAGAATGTTCGTCGG----------------------------------------------------------------
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--------------------CTAAGAGGGTCCTAAATTTTAGTGAAATCCTTTAACAGAGGAAAT----GGATGTTTAAG
AAAAACACAGTACAATTGAAGTCGCTCAT---ATACACGAGCATACATTCTCCTGTATG---------------------
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>chr2D_1
AAAGGATTAAGTTTCTTCGAGAATTGTTTTAAGTAGGCTTGCAAAATCCAGTAGTAAGGCTCAAGGTTCTCACCATAAAA
AAAAAGTATTAAAACACCGAATAAAATCATATTTGAGA---------TTTTTCTATGATGCCATATCATTTTGTTGTCTG
GTACCTGCAAGTATGTTCATCAGAGATC-------TTTCCTGTATGTAAACCCATTTATAGGCTTGCTTACAGAATAATT
GGTCAGAATCCCTGGTTTCTATGTAAGCGAGCTTCTGGGAGTTGCAACCGGAAAAATATCATATCAATCAACCACCAGGG
AACAAAATGATTTTCTAACTTTGGTATTAAATAACGG---TTTAGCAGGTATTTCCA-TCTAATTTTACCACTGTACAAG
CATAGTTCCTTCATCATCGCCATTCACCCCAGTGCTACCACTTCAGCTCAGCGAGTGCTGAGGTGAAAATTGAAATGATA
CCATGCCACAA-------GCCACAACCAATCCCCATCGCAGGCACACATGGACGAATTGCACAGAGAAGGACGGCAGCAA
GCAGCTGACCTGTGCCATCGCAGCGGAGCTCCTCGCAGGCGGAGCAGCCGGCGACGACGGCATCCACAGCCGACCCCCCT
GCGCCACCGGTTTTCACCACGTCCCACGCCGCCCTGACCGCCTCCCGGAACGGCCAGGTGCTCACCACCACCGGAAACAC
GCCGCCCCCTTCCTCCGCGCCTCCGCCATCCACGCCCTGGTTTAATATCCCCCAATCGCACCGATTCCATCAACGATAAC
ACGAACAAAGTCGACCTGTACGAAAATCAGATCGGATCGGATCAACAACTCACCAAGCACCAATTGAGCCGCAGCAGAAG
CAGCCCTAGGAGAAGCCCCGGGTTGCTCCGAGCCATGGAAGCTGGG----CGGTTGAGGTGGATTGGAGAATGGGGAATG
GCAGTAGTACTGGTGATCACTGAGAGGTGGGAGAGAAGGGAGCCTACCCCGTTATGTTGGGGGGTGAACTGGCAACGGGT
CCCACATGTCAGCGGATGGACATGACACGGCCTACCAAGGGCCCCACATGTCGGTGAGCATTGTGTGTTTCAGTGTGTGC
ATAGTTTGCAACTCCCACAGAGCTGTGGTGTCCCCCGAATACCCTAGCGGCGGCGGCGGCGG------CGATGGATGAGC
TGGGTGGAGGCGGCGGGAAGAAGGGCAAGGCATGGCCCTGGTGGCTTGGAGCGAGTGCGGCCCAGATCACCGGCGCGCTG
GTTTGGTTCCGGCGAGGCAAGGGCGGCAGCGACATGACGATGCCATTCAGGGCGTTCGCCGTCGCCTCTCTCTTCGTCGG
CGCCGGCGCCACGACCGTCACCGCCGGAGTGTCCGCGGCGGGCGTCGGATCGGTAAGTTGCCGGAGTCTAAAGCCCTCGC
ATCCGTGTGACGGATTCTCGATCTGGATGCGGCAAAAAATTTACATCGCGCGTCTGTGTTCTCTGTATCTGCAGGTGGAG
GAGATGAAGGGCTTGGGCGCGAGGATCCGGAAGTGGAGCAGAGTTCCTCCTCGCCGGGTGGAGGGAGGCGAGTAGTAGTG
CTGCCATGGATTTGATCTAGGAAAGTA---------CTGGAGCGGCAAGAGTTTGCATGTGGTCTG---GATTGCTTCAC
ATGATCACACATTTGGGAGATGCAAAGCAATAATCACATCTGTACTGTAC------TCT------GTAACGTTGTAGCGA
AAGCTT-GTTTACTCGAATTTTGATCCTGCCTTCTCGATTATAGCCATTGTACTCGTCTC--------AAACTTGTGAAA
CTGCTTGCTTAAAAGA-TTTGGTAATGTTATTTGACGAATGTCAGCCGGAA-GGGGTTGACAAGCAAACGTTGTTTCCTC
ACAGTTGCTTCGCGAGATCAGACGGTGGCAGTTTTAAACCAAAAA----TTCTTGTCATTTCCTCCTAGCGAGGGTGGTT
TTGAAGAAATTAGTATTCCCTCACGGCTAA--------------------------------------------------
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>SNPs
----S---------S----------------------------------------S------------------------
----------S---------------------------------S--S-------S-S----------------------
---------------------------SSSSSSS----------------------------------------------
-----------------------------------------------------------------------------S--
----------------------------------------------------S---------------------------
------------S----------S------------------SSSS----------------------------------
-----------SSSSSSS-------------------S------------------------------------------
----------------------------------------------------------S--------------S------
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-SS-------------S-------------------------S----------S--------------------------
------------------S------------------------------------S------SS----------------
-------------------------------------------------------------SS-------S---------
---S---------------------------S------------------------------------------------
------S--------------------------S------S------S-----------S--------------------
------------------S-------------------------------------------------S-----------
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----------------------------------------------------------------------------S---
------------------------------------------------S-------------------------------
---------------------------------------------------------------------------S---S
-------------------SSS----------------------------------------SSSSSSS-----------
--------------------------S-------------------------S-SS---SSSSSS-----S---------
--------------------------------------S---------------------------S-------------
--------------S-S------S--------------------------------------------------------
----------------------S-----------------------------------------------S---------
--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS---------------------------------SSSSS-SSS-SSSSSS-----------
------------S---------S------SSS---------------S--S--S-----SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_497
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-----------------------------------------------------------------------------ATA
CCATGCCACAAGCCACA---------------------------------------------------------------
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>reverse_1620
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-------------------CTGCTAGAGCGGCAAGAGTT-----------------------------------------
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>forward_856
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------------------------------------TCGGATCAACGACTCACCAC------------------------
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>reverse_2662
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---------------------CCCCCTTTCAGATTTGGGCT---------------------------------------
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