Multiple sequence alignment - TraesCS2A01G411200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G411200 chr2A 100.000 3656 0 0 1 3656 669429260 669432915 0.000000e+00 6752.0
1 TraesCS2A01G411200 chr2B 92.154 3250 153 37 1 3203 617931281 617934475 0.000000e+00 4495.0
2 TraesCS2A01G411200 chr2B 88.482 191 7 2 3199 3374 138131123 138130933 2.210000e-52 217.0
3 TraesCS2A01G411200 chr2B 98.182 55 1 0 3602 3656 138130901 138130847 3.010000e-16 97.1
4 TraesCS2A01G411200 chr2D 91.156 3245 164 52 2 3171 523624413 523627609 0.000000e+00 4289.0
5 TraesCS2A01G411200 chr7A 91.176 238 7 1 3205 3428 204159442 204159205 9.860000e-81 311.0
6 TraesCS2A01G411200 chr7A 98.182 55 1 0 3602 3656 204159208 204159154 3.010000e-16 97.1
7 TraesCS2A01G411200 chrUn 87.444 223 12 3 3199 3406 275822400 275822621 3.650000e-60 243.0
8 TraesCS2A01G411200 chrUn 87.444 223 12 3 3199 3406 355359909 355360130 3.650000e-60 243.0
9 TraesCS2A01G411200 chrUn 87.444 223 12 3 3199 3406 365375232 365375453 3.650000e-60 243.0
10 TraesCS2A01G411200 chrUn 87.444 223 12 3 3199 3406 385785022 385784801 3.650000e-60 243.0
11 TraesCS2A01G411200 chrUn 87.264 212 12 6 3209 3406 27447605 27447395 1.020000e-55 228.0
12 TraesCS2A01G411200 chrUn 96.364 55 2 0 3602 3656 27447366 27447312 1.400000e-14 91.6
13 TraesCS2A01G411200 chrUn 100.000 34 0 0 3623 3656 275822647 275822680 3.050000e-06 63.9
14 TraesCS2A01G411200 chrUn 100.000 34 0 0 3623 3656 355360156 355360189 3.050000e-06 63.9
15 TraesCS2A01G411200 chrUn 100.000 34 0 0 3623 3656 365375479 365375512 3.050000e-06 63.9
16 TraesCS2A01G411200 chrUn 100.000 34 0 0 3623 3656 385784775 385784742 3.050000e-06 63.9
17 TraesCS2A01G411200 chr7B 87.444 223 12 3 3199 3406 611241515 611241736 3.650000e-60 243.0
18 TraesCS2A01G411200 chr7B 100.000 34 0 0 3623 3656 611241762 611241795 3.050000e-06 63.9
19 TraesCS2A01G411200 chr7D 88.083 193 18 4 3415 3605 29807479 29807290 1.320000e-54 224.0
20 TraesCS2A01G411200 chr7D 87.293 181 17 5 3423 3600 152309557 152309734 6.190000e-48 202.0
21 TraesCS2A01G411200 chr7D 87.006 177 19 3 3428 3603 409488372 409488199 2.880000e-46 196.0
22 TraesCS2A01G411200 chr1B 88.764 178 14 5 3428 3603 581233141 581232968 2.860000e-51 213.0
23 TraesCS2A01G411200 chr4B 87.845 181 18 2 3426 3605 582184234 582184057 3.700000e-50 209.0
24 TraesCS2A01G411200 chr1D 87.432 183 17 5 3428 3607 200883188 200883367 4.790000e-49 206.0
25 TraesCS2A01G411200 chr5A 86.740 181 20 3 3424 3603 591098706 591098529 8.010000e-47 198.0
26 TraesCS2A01G411200 chr4D 87.006 177 19 3 3428 3603 481179573 481179400 2.880000e-46 196.0
27 TraesCS2A01G411200 chr3A 86.740 181 19 4 3425 3603 159343851 159344028 2.880000e-46 196.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G411200 chr2A 669429260 669432915 3655 False 6752 6752 100.000 1 3656 1 chr2A.!!$F1 3655
1 TraesCS2A01G411200 chr2B 617931281 617934475 3194 False 4495 4495 92.154 1 3203 1 chr2B.!!$F1 3202
2 TraesCS2A01G411200 chr2D 523624413 523627609 3196 False 4289 4289 91.156 2 3171 1 chr2D.!!$F1 3169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.038159 CGCCCGACTTCTCTTCAACT 60.038 55.0 0.00 0.00 0.0 3.16 F
302 311 0.250467 TGCTGTGGTTGAAGGAGCTC 60.250 55.0 4.71 4.71 0.0 4.09 F
1774 1805 0.393537 GCCTGTTGATCCTGAGGTGG 60.394 60.0 0.00 0.00 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1012 1043 0.178533 ATCCTGCTTCTGCTCTCAGC 59.821 55.0 0.00 0.0 42.82 4.26 R
2238 2291 0.103208 AGAAGAAGAGCGCCGGTATG 59.897 55.0 2.29 0.0 0.00 2.39 R
3393 3466 0.037605 CCGACCTCACAACCCAGTAC 60.038 60.0 0.00 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 0.038159 CGCCCGACTTCTCTTCAACT 60.038 55.000 0.00 0.00 0.00 3.16
77 78 1.153745 CTTTAGCCGCTCTGCTCGT 60.154 57.895 0.00 0.00 41.68 4.18
80 81 2.558554 TTAGCCGCTCTGCTCGTTCC 62.559 60.000 0.00 0.00 41.68 3.62
93 94 2.404215 CTCGTTCCGCTTTCTCTTTCA 58.596 47.619 0.00 0.00 0.00 2.69
96 97 2.996621 CGTTCCGCTTTCTCTTTCAGAT 59.003 45.455 0.00 0.00 0.00 2.90
169 170 2.032681 GCAAGACCGGCCTTGTCT 59.967 61.111 28.22 16.66 44.75 3.41
179 180 0.519077 GGCCTTGTCTTGCTTCTTCG 59.481 55.000 0.00 0.00 0.00 3.79
193 194 6.942532 TGCTTCTTCGCCTTTATATTCATT 57.057 33.333 0.00 0.00 0.00 2.57
195 196 6.074005 GCTTCTTCGCCTTTATATTCATTCG 58.926 40.000 0.00 0.00 0.00 3.34
203 204 5.472137 GCCTTTATATTCATTCGTGCCCTTA 59.528 40.000 0.00 0.00 0.00 2.69
230 236 0.745845 ATTCACGCATCTCTGTGCCC 60.746 55.000 0.00 0.00 42.06 5.36
231 237 2.803155 TTCACGCATCTCTGTGCCCC 62.803 60.000 0.00 0.00 42.06 5.80
232 238 4.101448 ACGCATCTCTGTGCCCCC 62.101 66.667 0.00 0.00 42.06 5.40
238 244 2.551856 ATCTCTGTGCCCCCTGCCTA 62.552 60.000 0.00 0.00 40.16 3.93
242 248 2.689034 GTGCCCCCTGCCTACTCT 60.689 66.667 0.00 0.00 40.16 3.24
250 256 1.573108 CCTGCCTACTCTTCTTCCCA 58.427 55.000 0.00 0.00 0.00 4.37
251 257 2.122768 CCTGCCTACTCTTCTTCCCAT 58.877 52.381 0.00 0.00 0.00 4.00
252 258 2.507471 CCTGCCTACTCTTCTTCCCATT 59.493 50.000 0.00 0.00 0.00 3.16
253 259 3.539604 CTGCCTACTCTTCTTCCCATTG 58.460 50.000 0.00 0.00 0.00 2.82
254 260 2.293170 GCCTACTCTTCTTCCCATTGC 58.707 52.381 0.00 0.00 0.00 3.56
255 261 2.092699 GCCTACTCTTCTTCCCATTGCT 60.093 50.000 0.00 0.00 0.00 3.91
256 262 3.539604 CCTACTCTTCTTCCCATTGCTG 58.460 50.000 0.00 0.00 0.00 4.41
257 263 2.503895 ACTCTTCTTCCCATTGCTGG 57.496 50.000 0.00 0.00 42.73 4.85
269 275 1.338973 CATTGCTGGTTGCTCAACTGT 59.661 47.619 11.91 0.00 43.37 3.55
277 283 1.801178 GTTGCTCAACTGTAGGTGAGC 59.199 52.381 33.92 33.92 43.08 4.26
278 284 0.321671 TGCTCAACTGTAGGTGAGCC 59.678 55.000 35.82 23.60 42.62 4.70
279 285 5.680210 GTTGCTCAACTGTAGGTGAGCCT 62.680 52.174 35.82 0.00 42.62 4.58
292 301 1.900498 GAGCCTTGCTGCTGTGGTT 60.900 57.895 0.00 0.00 42.95 3.67
299 308 0.535780 TGCTGCTGTGGTTGAAGGAG 60.536 55.000 0.00 0.00 35.18 3.69
300 309 2.251600 CTGCTGTGGTTGAAGGAGC 58.748 57.895 0.00 0.00 0.00 4.70
302 311 0.250467 TGCTGTGGTTGAAGGAGCTC 60.250 55.000 4.71 4.71 0.00 4.09
304 313 1.276421 GCTGTGGTTGAAGGAGCTCTA 59.724 52.381 14.64 0.00 0.00 2.43
305 314 2.093235 GCTGTGGTTGAAGGAGCTCTAT 60.093 50.000 14.64 2.21 0.00 1.98
307 316 4.583871 CTGTGGTTGAAGGAGCTCTATTT 58.416 43.478 14.64 6.04 0.00 1.40
309 318 4.761739 TGTGGTTGAAGGAGCTCTATTTTG 59.238 41.667 14.64 0.00 0.00 2.44
310 319 4.762251 GTGGTTGAAGGAGCTCTATTTTGT 59.238 41.667 14.64 0.00 0.00 2.83
312 321 5.241506 TGGTTGAAGGAGCTCTATTTTGTTG 59.758 40.000 14.64 0.00 0.00 3.33
313 322 5.241728 GGTTGAAGGAGCTCTATTTTGTTGT 59.758 40.000 14.64 0.00 0.00 3.32
316 325 6.970484 TGAAGGAGCTCTATTTTGTTGTTTC 58.030 36.000 14.64 2.26 0.00 2.78
318 327 5.635120 AGGAGCTCTATTTTGTTGTTTCCT 58.365 37.500 14.64 0.00 0.00 3.36
320 329 6.015940 AGGAGCTCTATTTTGTTGTTTCCTTG 60.016 38.462 14.64 0.00 0.00 3.61
321 330 6.089249 AGCTCTATTTTGTTGTTTCCTTGG 57.911 37.500 0.00 0.00 0.00 3.61
322 331 5.598417 AGCTCTATTTTGTTGTTTCCTTGGT 59.402 36.000 0.00 0.00 0.00 3.67
324 333 7.286775 AGCTCTATTTTGTTGTTTCCTTGGTAA 59.713 33.333 0.00 0.00 0.00 2.85
325 334 8.088365 GCTCTATTTTGTTGTTTCCTTGGTAAT 58.912 33.333 0.00 0.00 0.00 1.89
354 363 6.564709 TTCAGTTGATCAATCCAAGTTCAG 57.435 37.500 12.12 0.00 0.00 3.02
415 424 1.202698 CCCCTCCATCGACCAAATCTC 60.203 57.143 0.00 0.00 0.00 2.75
434 443 8.313292 CAAATCTCCCAATCAATTTCAGGTTAA 58.687 33.333 0.00 0.00 0.00 2.01
435 444 8.613922 AATCTCCCAATCAATTTCAGGTTAAT 57.386 30.769 0.00 0.00 0.00 1.40
436 445 7.408756 TCTCCCAATCAATTTCAGGTTAATG 57.591 36.000 0.00 0.00 0.00 1.90
451 460 7.450074 TCAGGTTAATGTCAACTGTATGAAGT 58.550 34.615 0.00 0.00 0.00 3.01
457 466 7.672983 AATGTCAACTGTATGAAGTTAGTGG 57.327 36.000 0.00 0.00 38.34 4.00
470 479 5.065988 TGAAGTTAGTGGTTGTTTTCTCTGC 59.934 40.000 0.00 0.00 0.00 4.26
482 491 1.626356 TTCTCTGCTCAATCCGGGGG 61.626 60.000 0.00 0.00 0.00 5.40
483 492 2.285368 TCTGCTCAATCCGGGGGT 60.285 61.111 0.00 0.00 0.00 4.95
484 493 2.190578 CTGCTCAATCCGGGGGTC 59.809 66.667 0.00 0.00 0.00 4.46
485 494 3.406595 CTGCTCAATCCGGGGGTCC 62.407 68.421 0.00 0.00 0.00 4.46
486 495 4.191015 GCTCAATCCGGGGGTCCC 62.191 72.222 0.00 0.00 41.09 4.46
489 498 2.690881 CAATCCGGGGGTCCCTGA 60.691 66.667 16.20 6.85 45.10 3.86
565 596 6.382869 AAAGTGCTCATTTGTAGGCATATC 57.617 37.500 0.00 0.00 37.05 1.63
603 634 3.380142 GCCGCTCAAACAAAAGATTCAA 58.620 40.909 0.00 0.00 0.00 2.69
628 659 7.931578 TGATTTAACAATGTTTCCCTCGTAT 57.068 32.000 3.17 0.00 0.00 3.06
675 706 6.058183 ACATCCAACCTAATCTTATGACAGC 58.942 40.000 0.00 0.00 0.00 4.40
704 735 3.386768 AGTGGTAGCAATATAGCGTGG 57.613 47.619 0.00 0.00 40.15 4.94
773 804 7.750229 TTCATCCAAGCATTGTTATAGGATC 57.250 36.000 0.00 0.00 46.99 3.36
844 875 6.817765 TCATAACTCCAAGTTCCACATTTC 57.182 37.500 0.00 0.00 39.51 2.17
966 997 4.660789 TCTTCCCGGCTACATTAACTAC 57.339 45.455 0.00 0.00 0.00 2.73
968 999 2.749600 TCCCGGCTACATTAACTACCA 58.250 47.619 0.00 0.00 0.00 3.25
1011 1042 3.157252 TCGCTCATGGGCTCCTCC 61.157 66.667 17.16 0.00 0.00 4.30
1012 1043 4.598894 CGCTCATGGGCTCCTCCG 62.599 72.222 17.16 0.00 34.94 4.63
1029 1060 1.810441 CGCTGAGAGCAGAAGCAGG 60.810 63.158 0.00 0.00 45.17 4.85
1212 1243 3.221771 TGATCCCAAGACAACAAACCTG 58.778 45.455 0.00 0.00 0.00 4.00
1509 1540 5.646577 TCCACAGCTTCTACTACTTTCTC 57.353 43.478 0.00 0.00 0.00 2.87
1530 1561 2.815308 GTCCAGATGATCGCCGGT 59.185 61.111 1.90 0.00 0.00 5.28
1635 1666 1.112916 TCTGGAACGCTCACACCTCA 61.113 55.000 0.00 0.00 0.00 3.86
1710 1741 2.904866 TGGTCGTTTGCAGTGCCC 60.905 61.111 13.72 5.73 0.00 5.36
1722 1753 2.755469 GTGCCCGGTGCCATGATT 60.755 61.111 11.72 0.00 40.16 2.57
1749 1780 3.056328 GGGCTGGCCGTGTTTCTC 61.056 66.667 3.84 0.00 36.85 2.87
1767 1798 2.909006 TCTCTTCTTGCCTGTTGATCCT 59.091 45.455 0.00 0.00 0.00 3.24
1774 1805 0.393537 GCCTGTTGATCCTGAGGTGG 60.394 60.000 0.00 0.00 0.00 4.61
1776 1807 1.065854 CCTGTTGATCCTGAGGTGGTC 60.066 57.143 0.00 0.00 0.00 4.02
1971 2002 1.123928 CGTTCCTCTATTGGCTCCCT 58.876 55.000 0.00 0.00 0.00 4.20
2009 2060 7.033791 CACACAGGTTCGTCTAGTTGTATATT 58.966 38.462 0.00 0.00 0.00 1.28
2018 2069 5.286320 CGTCTAGTTGTATATTATGCTGGCG 59.714 44.000 0.00 0.00 0.00 5.69
2115 2168 3.576550 GGGGAGAATATCTGTCAGACTCC 59.423 52.174 21.28 21.28 40.85 3.85
2196 2249 2.105128 CACATCTCCGACCGGCTC 59.895 66.667 0.00 0.00 34.68 4.70
2235 2288 1.446272 GGCGACCTTCACCTTCTCG 60.446 63.158 0.00 0.00 0.00 4.04
2238 2291 1.079057 GACCTTCACCTTCTCGGCC 60.079 63.158 0.00 0.00 35.61 6.13
2581 2634 2.678580 TCGTGGCCGAGATCACCA 60.679 61.111 0.00 0.00 38.40 4.17
2649 2702 2.179517 GTGTCGTCGCTGGAGGAG 59.820 66.667 0.00 0.00 37.71 3.69
2694 2747 4.682320 GCCGGACTGTACATTGAATTAGGA 60.682 45.833 5.05 0.00 0.00 2.94
2695 2748 5.611374 CCGGACTGTACATTGAATTAGGAT 58.389 41.667 0.00 0.00 0.00 3.24
2699 2752 5.754782 ACTGTACATTGAATTAGGATGGCA 58.245 37.500 0.00 0.00 0.00 4.92
2702 2755 3.884895 ACATTGAATTAGGATGGCACGA 58.115 40.909 0.00 0.00 0.00 4.35
2703 2756 3.879295 ACATTGAATTAGGATGGCACGAG 59.121 43.478 0.00 0.00 0.00 4.18
2704 2757 2.620251 TGAATTAGGATGGCACGAGG 57.380 50.000 0.00 0.00 0.00 4.63
2705 2758 2.115427 TGAATTAGGATGGCACGAGGA 58.885 47.619 0.00 0.00 0.00 3.71
2706 2759 2.103094 TGAATTAGGATGGCACGAGGAG 59.897 50.000 0.00 0.00 0.00 3.69
2707 2760 1.051812 ATTAGGATGGCACGAGGAGG 58.948 55.000 0.00 0.00 0.00 4.30
2708 2761 1.048724 TTAGGATGGCACGAGGAGGG 61.049 60.000 0.00 0.00 0.00 4.30
2709 2762 2.238319 TAGGATGGCACGAGGAGGGT 62.238 60.000 0.00 0.00 0.00 4.34
2710 2763 2.187946 GATGGCACGAGGAGGGTG 59.812 66.667 0.00 0.00 38.42 4.61
2711 2764 3.391665 GATGGCACGAGGAGGGTGG 62.392 68.421 0.00 0.00 35.94 4.61
2714 2767 4.767255 GCACGAGGAGGGTGGCAG 62.767 72.222 0.00 0.00 35.94 4.85
2715 2768 4.087892 CACGAGGAGGGTGGCAGG 62.088 72.222 0.00 0.00 0.00 4.85
2759 2812 3.391382 CGGGAAGAAGGAGCGGGT 61.391 66.667 0.00 0.00 0.00 5.28
2834 2899 1.938577 GTGCTGTGCATATGGAGTGAG 59.061 52.381 4.56 0.00 41.91 3.51
2835 2900 1.556451 TGCTGTGCATATGGAGTGAGT 59.444 47.619 4.56 0.00 31.71 3.41
2836 2901 1.938577 GCTGTGCATATGGAGTGAGTG 59.061 52.381 4.56 0.00 0.00 3.51
2837 2902 2.419159 GCTGTGCATATGGAGTGAGTGA 60.419 50.000 4.56 0.00 0.00 3.41
2853 2918 3.369756 TGAGTGATTGTTACGCCGAATTC 59.630 43.478 0.00 0.00 0.00 2.17
2855 2920 2.346244 GTGATTGTTACGCCGAATTCGA 59.654 45.455 28.76 6.12 43.02 3.71
2856 2921 2.346244 TGATTGTTACGCCGAATTCGAC 59.654 45.455 28.76 17.08 43.02 4.20
2927 2995 1.084289 GTGCCGACCATTTAGACCAC 58.916 55.000 0.00 0.00 0.00 4.16
2929 2997 1.087771 GCCGACCATTTAGACCACGG 61.088 60.000 0.00 0.00 41.44 4.94
2991 3059 2.750237 GGAAACGAAGGCCGGCAT 60.750 61.111 30.85 21.35 43.93 4.40
3062 3130 6.346678 CGCATGATACTGTGAAATCTGAGATG 60.347 42.308 0.00 0.00 0.00 2.90
3133 3206 2.359478 CGGTTCCTCCCCCAAACG 60.359 66.667 0.00 0.00 0.00 3.60
3143 3216 2.297597 CTCCCCCAAACGCACAATTTTA 59.702 45.455 0.00 0.00 0.00 1.52
3177 3250 5.545063 TCAAAGAAAAATTGAAGGGGACC 57.455 39.130 0.00 0.00 39.49 4.46
3195 3268 2.281002 AAGGCCGGCGTAAAACGT 60.281 55.556 23.92 1.82 44.73 3.99
3200 3273 0.807275 GCCGGCGTAAAACGTCCTAT 60.807 55.000 12.58 0.00 44.43 2.57
3201 3274 1.535860 GCCGGCGTAAAACGTCCTATA 60.536 52.381 12.58 0.00 44.43 1.31
3203 3276 3.383761 CCGGCGTAAAACGTCCTATAAT 58.616 45.455 6.01 0.00 44.43 1.28
3204 3277 3.803778 CCGGCGTAAAACGTCCTATAATT 59.196 43.478 6.01 0.00 44.43 1.40
3205 3278 4.270808 CCGGCGTAAAACGTCCTATAATTT 59.729 41.667 6.01 0.00 44.43 1.82
3206 3279 5.461737 CCGGCGTAAAACGTCCTATAATTTA 59.538 40.000 6.01 0.00 44.43 1.40
3207 3280 6.146021 CCGGCGTAAAACGTCCTATAATTTAT 59.854 38.462 6.01 0.00 44.43 1.40
3208 3281 7.307337 CCGGCGTAAAACGTCCTATAATTTATT 60.307 37.037 6.01 0.00 44.43 1.40
3209 3282 8.698854 CGGCGTAAAACGTCCTATAATTTATTA 58.301 33.333 0.00 0.00 44.43 0.98
3236 3309 7.662897 ACAGTATAACTCAGCTAATTAGGAGC 58.337 38.462 14.28 2.52 40.42 4.70
3237 3310 7.093992 CAGTATAACTCAGCTAATTAGGAGCC 58.906 42.308 14.28 0.00 41.06 4.70
3238 3311 7.013834 AGTATAACTCAGCTAATTAGGAGCCT 58.986 38.462 14.28 6.83 41.06 4.58
3239 3312 4.681074 AACTCAGCTAATTAGGAGCCTC 57.319 45.455 14.28 0.00 41.06 4.70
3240 3313 2.969262 ACTCAGCTAATTAGGAGCCTCC 59.031 50.000 14.28 1.26 41.06 4.30
3241 3314 2.968574 CTCAGCTAATTAGGAGCCTCCA 59.031 50.000 14.46 0.00 41.06 3.86
3242 3315 3.582208 CTCAGCTAATTAGGAGCCTCCAT 59.418 47.826 14.46 0.56 41.06 3.41
3243 3316 4.752063 TCAGCTAATTAGGAGCCTCCATA 58.248 43.478 14.46 0.00 41.06 2.74
3244 3317 4.774726 TCAGCTAATTAGGAGCCTCCATAG 59.225 45.833 14.46 10.42 41.06 2.23
3245 3318 4.530161 CAGCTAATTAGGAGCCTCCATAGT 59.470 45.833 14.46 1.83 41.06 2.12
3246 3319 4.530161 AGCTAATTAGGAGCCTCCATAGTG 59.470 45.833 14.46 0.00 41.06 2.74
3247 3320 4.528596 GCTAATTAGGAGCCTCCATAGTGA 59.471 45.833 14.46 0.00 39.61 3.41
3248 3321 5.188751 GCTAATTAGGAGCCTCCATAGTGAT 59.811 44.000 14.46 0.00 39.61 3.06
3249 3322 6.296145 GCTAATTAGGAGCCTCCATAGTGATT 60.296 42.308 14.46 3.43 39.61 2.57
3250 3323 6.521527 AATTAGGAGCCTCCATAGTGATTT 57.478 37.500 14.46 0.00 39.61 2.17
3251 3324 3.853355 AGGAGCCTCCATAGTGATTTG 57.147 47.619 14.46 0.00 39.61 2.32
3252 3325 2.441001 AGGAGCCTCCATAGTGATTTGG 59.559 50.000 14.46 0.00 39.61 3.28
3253 3326 2.487986 GGAGCCTCCATAGTGATTTGGG 60.488 54.545 5.69 0.00 36.28 4.12
3254 3327 2.439507 GAGCCTCCATAGTGATTTGGGA 59.560 50.000 0.00 0.00 33.62 4.37
3255 3328 3.059097 AGCCTCCATAGTGATTTGGGAT 58.941 45.455 0.00 0.00 33.62 3.85
3256 3329 3.073650 AGCCTCCATAGTGATTTGGGATC 59.926 47.826 0.00 0.00 33.62 3.36
3257 3330 3.812167 GCCTCCATAGTGATTTGGGATCC 60.812 52.174 1.92 1.92 33.62 3.36
3258 3331 3.654806 CCTCCATAGTGATTTGGGATCCT 59.345 47.826 12.58 0.00 33.62 3.24
3259 3332 4.846367 CCTCCATAGTGATTTGGGATCCTA 59.154 45.833 12.58 1.47 33.62 2.94
3260 3333 5.310594 CCTCCATAGTGATTTGGGATCCTAA 59.689 44.000 12.58 9.49 33.62 2.69
3261 3334 6.183361 CCTCCATAGTGATTTGGGATCCTAAA 60.183 42.308 23.75 23.75 33.62 1.85
3262 3335 6.601332 TCCATAGTGATTTGGGATCCTAAAC 58.399 40.000 23.98 17.48 33.62 2.01
3263 3336 5.770162 CCATAGTGATTTGGGATCCTAAACC 59.230 44.000 23.98 16.36 0.00 3.27
3264 3337 3.886123 AGTGATTTGGGATCCTAAACCG 58.114 45.455 23.98 0.00 0.00 4.44
3265 3338 3.265995 AGTGATTTGGGATCCTAAACCGT 59.734 43.478 23.98 9.95 0.00 4.83
3266 3339 3.626217 GTGATTTGGGATCCTAAACCGTC 59.374 47.826 23.98 17.88 0.00 4.79
3267 3340 2.793288 TTTGGGATCCTAAACCGTCC 57.207 50.000 18.57 0.00 0.00 4.79
3268 3341 0.538118 TTGGGATCCTAAACCGTCCG 59.462 55.000 12.58 0.00 0.00 4.79
3269 3342 0.324552 TGGGATCCTAAACCGTCCGA 60.325 55.000 12.58 0.00 0.00 4.55
3270 3343 1.046204 GGGATCCTAAACCGTCCGAT 58.954 55.000 12.58 0.00 0.00 4.18
3271 3344 1.415289 GGGATCCTAAACCGTCCGATT 59.585 52.381 12.58 0.00 0.00 3.34
3272 3345 2.629617 GGGATCCTAAACCGTCCGATTA 59.370 50.000 12.58 0.00 0.00 1.75
3273 3346 3.070015 GGGATCCTAAACCGTCCGATTAA 59.930 47.826 12.58 0.00 0.00 1.40
3274 3347 4.304939 GGATCCTAAACCGTCCGATTAAG 58.695 47.826 3.84 0.00 0.00 1.85
3275 3348 3.169355 TCCTAAACCGTCCGATTAAGC 57.831 47.619 0.00 0.00 0.00 3.09
3276 3349 1.856597 CCTAAACCGTCCGATTAAGCG 59.143 52.381 6.05 6.05 0.00 4.68
3277 3350 2.533266 CTAAACCGTCCGATTAAGCGT 58.467 47.619 12.66 0.00 0.00 5.07
3278 3351 2.652941 AAACCGTCCGATTAAGCGTA 57.347 45.000 12.66 0.00 0.00 4.42
3279 3352 2.877043 AACCGTCCGATTAAGCGTAT 57.123 45.000 12.66 0.00 0.00 3.06
3280 3353 3.988379 AACCGTCCGATTAAGCGTATA 57.012 42.857 12.66 0.00 0.00 1.47
3281 3354 3.988379 ACCGTCCGATTAAGCGTATAA 57.012 42.857 12.66 0.00 0.00 0.98
3282 3355 4.305989 ACCGTCCGATTAAGCGTATAAA 57.694 40.909 12.66 0.00 0.00 1.40
3283 3356 4.044426 ACCGTCCGATTAAGCGTATAAAC 58.956 43.478 12.66 1.72 0.00 2.01
3301 3374 8.233692 GTATAAACGAGTGAGATCATTCCATC 57.766 38.462 0.00 0.00 29.93 3.51
3302 3375 3.742433 ACGAGTGAGATCATTCCATCC 57.258 47.619 0.00 0.00 29.93 3.51
3303 3376 3.303938 ACGAGTGAGATCATTCCATCCT 58.696 45.455 0.00 0.00 29.93 3.24
3304 3377 3.320541 ACGAGTGAGATCATTCCATCCTC 59.679 47.826 0.00 0.00 29.93 3.71
3305 3378 3.573538 CGAGTGAGATCATTCCATCCTCT 59.426 47.826 0.00 0.00 29.93 3.69
3306 3379 4.321156 CGAGTGAGATCATTCCATCCTCTC 60.321 50.000 0.00 0.00 34.33 3.20
3307 3380 3.573538 AGTGAGATCATTCCATCCTCTCG 59.426 47.826 0.00 0.00 36.07 4.04
3308 3381 3.320541 GTGAGATCATTCCATCCTCTCGT 59.679 47.826 0.00 0.00 36.07 4.18
3309 3382 4.520874 GTGAGATCATTCCATCCTCTCGTA 59.479 45.833 0.00 0.00 36.07 3.43
3310 3383 4.764308 TGAGATCATTCCATCCTCTCGTAG 59.236 45.833 0.00 0.00 36.07 3.51
3311 3384 3.509575 AGATCATTCCATCCTCTCGTAGC 59.490 47.826 0.00 0.00 0.00 3.58
3312 3385 2.666317 TCATTCCATCCTCTCGTAGCA 58.334 47.619 0.00 0.00 0.00 3.49
3313 3386 3.234353 TCATTCCATCCTCTCGTAGCAT 58.766 45.455 0.00 0.00 0.00 3.79
3314 3387 3.643320 TCATTCCATCCTCTCGTAGCATT 59.357 43.478 0.00 0.00 0.00 3.56
3315 3388 3.735237 TTCCATCCTCTCGTAGCATTC 57.265 47.619 0.00 0.00 0.00 2.67
3316 3389 2.666317 TCCATCCTCTCGTAGCATTCA 58.334 47.619 0.00 0.00 0.00 2.57
3317 3390 3.234353 TCCATCCTCTCGTAGCATTCAT 58.766 45.455 0.00 0.00 0.00 2.57
3318 3391 3.643320 TCCATCCTCTCGTAGCATTCATT 59.357 43.478 0.00 0.00 0.00 2.57
3319 3392 4.101585 TCCATCCTCTCGTAGCATTCATTT 59.898 41.667 0.00 0.00 0.00 2.32
3320 3393 4.212847 CCATCCTCTCGTAGCATTCATTTG 59.787 45.833 0.00 0.00 0.00 2.32
3321 3394 3.198068 TCCTCTCGTAGCATTCATTTGC 58.802 45.455 0.00 0.00 43.09 3.68
3327 3400 4.895854 GCATTCATTTGCGCCTGT 57.104 50.000 4.18 0.00 32.06 4.00
3328 3401 3.126729 GCATTCATTTGCGCCTGTT 57.873 47.368 4.18 0.00 32.06 3.16
3329 3402 0.994263 GCATTCATTTGCGCCTGTTC 59.006 50.000 4.18 0.00 32.06 3.18
3330 3403 1.261989 CATTCATTTGCGCCTGTTCG 58.738 50.000 4.18 0.00 0.00 3.95
3338 3411 3.159984 CGCCTGTTCGCTGAAGTC 58.840 61.111 0.00 0.00 0.00 3.01
3339 3412 2.720758 CGCCTGTTCGCTGAAGTCG 61.721 63.158 0.00 0.00 0.00 4.18
3340 3413 1.372997 GCCTGTTCGCTGAAGTCGA 60.373 57.895 0.00 0.00 0.00 4.20
3341 3414 0.944311 GCCTGTTCGCTGAAGTCGAA 60.944 55.000 0.00 5.78 42.74 3.71
3345 3418 3.671262 TTCGCTGAAGTCGAACCAA 57.329 47.368 0.00 0.00 40.49 3.67
3346 3419 1.214367 TTCGCTGAAGTCGAACCAAC 58.786 50.000 0.00 0.00 40.49 3.77
3347 3420 0.103390 TCGCTGAAGTCGAACCAACA 59.897 50.000 0.00 0.00 32.53 3.33
3348 3421 1.148310 CGCTGAAGTCGAACCAACAT 58.852 50.000 0.00 0.00 0.00 2.71
3349 3422 1.126846 CGCTGAAGTCGAACCAACATC 59.873 52.381 0.00 0.00 0.00 3.06
3350 3423 2.143122 GCTGAAGTCGAACCAACATCA 58.857 47.619 0.00 0.00 0.00 3.07
3351 3424 2.548057 GCTGAAGTCGAACCAACATCAA 59.452 45.455 0.00 0.00 0.00 2.57
3352 3425 3.003275 GCTGAAGTCGAACCAACATCAAA 59.997 43.478 0.00 0.00 0.00 2.69
3353 3426 4.497340 GCTGAAGTCGAACCAACATCAAAA 60.497 41.667 0.00 0.00 0.00 2.44
3354 3427 5.168526 TGAAGTCGAACCAACATCAAAAG 57.831 39.130 0.00 0.00 0.00 2.27
3355 3428 4.036262 TGAAGTCGAACCAACATCAAAAGG 59.964 41.667 0.00 0.00 0.00 3.11
3356 3429 2.884639 AGTCGAACCAACATCAAAAGGG 59.115 45.455 0.00 0.00 0.00 3.95
3357 3430 1.611491 TCGAACCAACATCAAAAGGGC 59.389 47.619 0.00 0.00 0.00 5.19
3358 3431 1.336795 CGAACCAACATCAAAAGGGCC 60.337 52.381 0.00 0.00 0.00 5.80
3359 3432 0.678950 AACCAACATCAAAAGGGCCG 59.321 50.000 0.00 0.00 0.00 6.13
3360 3433 1.079888 CCAACATCAAAAGGGCCGC 60.080 57.895 0.00 0.00 0.00 6.53
3361 3434 1.535204 CCAACATCAAAAGGGCCGCT 61.535 55.000 0.00 0.00 0.00 5.52
3362 3435 0.388907 CAACATCAAAAGGGCCGCTG 60.389 55.000 0.00 0.00 0.00 5.18
3363 3436 2.158561 AACATCAAAAGGGCCGCTGC 62.159 55.000 0.00 0.00 0.00 5.25
3364 3437 2.036256 ATCAAAAGGGCCGCTGCT 59.964 55.556 0.00 0.00 37.74 4.24
3365 3438 2.048603 ATCAAAAGGGCCGCTGCTC 61.049 57.895 0.00 0.00 38.71 4.26
3366 3439 3.752339 CAAAAGGGCCGCTGCTCC 61.752 66.667 0.00 0.00 39.53 4.70
3384 3457 0.659957 CCGCAGGCTTATTTCTGAGC 59.340 55.000 0.00 0.00 46.14 4.26
3393 3466 5.482686 GCTTATTTCTGAGCCTTCTGAAG 57.517 43.478 10.46 10.46 40.77 3.02
3394 3467 4.940654 GCTTATTTCTGAGCCTTCTGAAGT 59.059 41.667 15.72 0.00 40.77 3.01
3395 3468 6.109359 GCTTATTTCTGAGCCTTCTGAAGTA 58.891 40.000 15.72 0.00 40.77 2.24
3396 3469 6.036626 GCTTATTTCTGAGCCTTCTGAAGTAC 59.963 42.308 15.72 7.92 40.77 2.73
3397 3470 5.753721 ATTTCTGAGCCTTCTGAAGTACT 57.246 39.130 15.72 12.28 40.77 2.73
3398 3471 4.527509 TTCTGAGCCTTCTGAAGTACTG 57.472 45.455 15.72 10.16 36.66 2.74
3399 3472 2.828520 TCTGAGCCTTCTGAAGTACTGG 59.171 50.000 15.72 2.72 0.00 4.00
3400 3473 1.902508 TGAGCCTTCTGAAGTACTGGG 59.097 52.381 15.72 2.02 0.00 4.45
3401 3474 1.903183 GAGCCTTCTGAAGTACTGGGT 59.097 52.381 15.72 6.83 0.00 4.51
3402 3475 2.303311 GAGCCTTCTGAAGTACTGGGTT 59.697 50.000 15.72 0.00 0.00 4.11
3403 3476 2.039084 AGCCTTCTGAAGTACTGGGTTG 59.961 50.000 15.72 0.00 0.00 3.77
3404 3477 2.224548 GCCTTCTGAAGTACTGGGTTGT 60.225 50.000 15.72 0.00 0.00 3.32
3405 3478 3.403038 CCTTCTGAAGTACTGGGTTGTG 58.597 50.000 15.72 0.00 0.00 3.33
3406 3479 3.071023 CCTTCTGAAGTACTGGGTTGTGA 59.929 47.826 15.72 0.00 0.00 3.58
3407 3480 4.310769 CTTCTGAAGTACTGGGTTGTGAG 58.689 47.826 9.26 0.00 0.00 3.51
3408 3481 2.632996 TCTGAAGTACTGGGTTGTGAGG 59.367 50.000 0.00 0.00 0.00 3.86
3409 3482 2.368875 CTGAAGTACTGGGTTGTGAGGT 59.631 50.000 0.00 0.00 0.00 3.85
3410 3483 2.367567 TGAAGTACTGGGTTGTGAGGTC 59.632 50.000 0.00 0.00 0.00 3.85
3411 3484 0.966920 AGTACTGGGTTGTGAGGTCG 59.033 55.000 0.00 0.00 0.00 4.79
3412 3485 0.037605 GTACTGGGTTGTGAGGTCGG 60.038 60.000 0.00 0.00 0.00 4.79
3413 3486 1.823169 TACTGGGTTGTGAGGTCGGC 61.823 60.000 0.00 0.00 0.00 5.54
3414 3487 3.901797 CTGGGTTGTGAGGTCGGCC 62.902 68.421 0.00 0.00 0.00 6.13
3428 3501 4.832608 GGCCGCCCGGTGACTTAG 62.833 72.222 8.66 0.00 37.65 2.18
3429 3502 4.832608 GCCGCCCGGTGACTTAGG 62.833 72.222 8.66 0.00 37.65 2.69
3430 3503 3.387947 CCGCCCGGTGACTTAGGT 61.388 66.667 0.00 0.00 0.00 3.08
3431 3504 2.125673 CGCCCGGTGACTTAGGTG 60.126 66.667 0.00 0.00 0.00 4.00
3432 3505 2.267961 GCCCGGTGACTTAGGTGG 59.732 66.667 0.00 0.00 0.00 4.61
3433 3506 2.590114 GCCCGGTGACTTAGGTGGT 61.590 63.158 0.00 0.00 0.00 4.16
3434 3507 1.295423 CCCGGTGACTTAGGTGGTG 59.705 63.158 0.00 0.00 0.00 4.17
3435 3508 1.477685 CCCGGTGACTTAGGTGGTGT 61.478 60.000 0.00 0.00 0.00 4.16
3436 3509 0.395312 CCGGTGACTTAGGTGGTGTT 59.605 55.000 0.00 0.00 0.00 3.32
3437 3510 1.202722 CCGGTGACTTAGGTGGTGTTT 60.203 52.381 0.00 0.00 0.00 2.83
3438 3511 1.871039 CGGTGACTTAGGTGGTGTTTG 59.129 52.381 0.00 0.00 0.00 2.93
3439 3512 2.227194 GGTGACTTAGGTGGTGTTTGG 58.773 52.381 0.00 0.00 0.00 3.28
3440 3513 2.422377 GGTGACTTAGGTGGTGTTTGGT 60.422 50.000 0.00 0.00 0.00 3.67
3441 3514 3.284617 GTGACTTAGGTGGTGTTTGGTT 58.715 45.455 0.00 0.00 0.00 3.67
3442 3515 3.314357 GTGACTTAGGTGGTGTTTGGTTC 59.686 47.826 0.00 0.00 0.00 3.62
3443 3516 3.201266 TGACTTAGGTGGTGTTTGGTTCT 59.799 43.478 0.00 0.00 0.00 3.01
3444 3517 3.813724 GACTTAGGTGGTGTTTGGTTCTC 59.186 47.826 0.00 0.00 0.00 2.87
3445 3518 3.458487 ACTTAGGTGGTGTTTGGTTCTCT 59.542 43.478 0.00 0.00 0.00 3.10
3446 3519 4.657039 ACTTAGGTGGTGTTTGGTTCTCTA 59.343 41.667 0.00 0.00 0.00 2.43
3447 3520 3.771577 AGGTGGTGTTTGGTTCTCTAG 57.228 47.619 0.00 0.00 0.00 2.43
3448 3521 3.046374 AGGTGGTGTTTGGTTCTCTAGT 58.954 45.455 0.00 0.00 0.00 2.57
3449 3522 3.071167 AGGTGGTGTTTGGTTCTCTAGTC 59.929 47.826 0.00 0.00 0.00 2.59
3450 3523 3.400255 GTGGTGTTTGGTTCTCTAGTCC 58.600 50.000 0.00 0.00 0.00 3.85
3451 3524 3.071167 GTGGTGTTTGGTTCTCTAGTCCT 59.929 47.826 0.00 0.00 0.00 3.85
3452 3525 4.282703 GTGGTGTTTGGTTCTCTAGTCCTA 59.717 45.833 0.00 0.00 0.00 2.94
3453 3526 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
3454 3527 4.081586 GGTGTTTGGTTCTCTAGTCCTAGG 60.082 50.000 0.82 0.82 34.06 3.02
3455 3528 4.771054 GTGTTTGGTTCTCTAGTCCTAGGA 59.229 45.833 7.62 7.62 34.06 2.94
3456 3529 5.245526 GTGTTTGGTTCTCTAGTCCTAGGAA 59.754 44.000 14.65 0.00 34.06 3.36
3457 3530 6.023603 TGTTTGGTTCTCTAGTCCTAGGAAT 58.976 40.000 17.20 17.20 34.06 3.01
3458 3531 6.500751 TGTTTGGTTCTCTAGTCCTAGGAATT 59.499 38.462 18.34 9.61 34.06 2.17
3459 3532 7.017254 TGTTTGGTTCTCTAGTCCTAGGAATTT 59.983 37.037 18.34 6.98 34.06 1.82
3460 3533 7.569599 TTGGTTCTCTAGTCCTAGGAATTTT 57.430 36.000 18.34 4.40 34.06 1.82
3461 3534 7.569599 TGGTTCTCTAGTCCTAGGAATTTTT 57.430 36.000 18.34 1.86 34.06 1.94
3462 3535 7.621796 TGGTTCTCTAGTCCTAGGAATTTTTC 58.378 38.462 18.34 1.46 34.06 2.29
3463 3536 7.458170 TGGTTCTCTAGTCCTAGGAATTTTTCT 59.542 37.037 18.34 9.73 34.06 2.52
3464 3537 8.979534 GGTTCTCTAGTCCTAGGAATTTTTCTA 58.020 37.037 18.34 10.38 34.06 2.10
3466 3539 9.771140 TTCTCTAGTCCTAGGAATTTTTCTAGT 57.229 33.333 18.34 0.00 33.10 2.57
3467 3540 9.411189 TCTCTAGTCCTAGGAATTTTTCTAGTC 57.589 37.037 18.34 0.00 33.10 2.59
3468 3541 9.416284 CTCTAGTCCTAGGAATTTTTCTAGTCT 57.584 37.037 18.34 6.22 33.10 3.24
3469 3542 9.771140 TCTAGTCCTAGGAATTTTTCTAGTCTT 57.229 33.333 18.34 0.00 33.10 3.01
3472 3545 8.103935 AGTCCTAGGAATTTTTCTAGTCTTTGG 58.896 37.037 14.65 0.00 33.10 3.28
3473 3546 7.337184 GTCCTAGGAATTTTTCTAGTCTTTGGG 59.663 40.741 14.65 0.00 33.10 4.12
3474 3547 7.238933 TCCTAGGAATTTTTCTAGTCTTTGGGA 59.761 37.037 9.71 0.00 33.10 4.37
3475 3548 7.337184 CCTAGGAATTTTTCTAGTCTTTGGGAC 59.663 40.741 1.05 0.00 44.80 4.46
3505 3578 5.506686 AAAAACTCTCAAGAAGGTGCTTC 57.493 39.130 0.00 0.00 40.45 3.86
3514 3587 2.498644 GAAGGTGCTTCTAAGGGCTT 57.501 50.000 0.00 0.00 37.49 4.35
3515 3588 2.796557 GAAGGTGCTTCTAAGGGCTTT 58.203 47.619 0.00 0.00 37.49 3.51
3516 3589 2.980246 AGGTGCTTCTAAGGGCTTTT 57.020 45.000 0.00 0.00 0.00 2.27
3517 3590 4.332828 GAAGGTGCTTCTAAGGGCTTTTA 58.667 43.478 0.00 0.00 37.49 1.52
3518 3591 4.382386 AGGTGCTTCTAAGGGCTTTTAA 57.618 40.909 0.00 0.00 0.00 1.52
3519 3592 4.079970 AGGTGCTTCTAAGGGCTTTTAAC 58.920 43.478 0.00 0.00 0.00 2.01
3520 3593 3.824443 GGTGCTTCTAAGGGCTTTTAACA 59.176 43.478 0.00 0.00 0.00 2.41
3521 3594 4.279922 GGTGCTTCTAAGGGCTTTTAACAA 59.720 41.667 0.00 0.00 0.00 2.83
3522 3595 5.221362 GGTGCTTCTAAGGGCTTTTAACAAA 60.221 40.000 0.00 0.00 0.00 2.83
3523 3596 6.277605 GTGCTTCTAAGGGCTTTTAACAAAA 58.722 36.000 0.00 0.00 0.00 2.44
3524 3597 6.759356 GTGCTTCTAAGGGCTTTTAACAAAAA 59.241 34.615 0.00 0.00 0.00 1.94
3544 3617 5.487861 AAAATCCTCCCATCCTATTTGGT 57.512 39.130 0.00 0.00 37.07 3.67
3545 3618 5.487861 AAATCCTCCCATCCTATTTGGTT 57.512 39.130 0.00 0.00 37.07 3.67
3546 3619 5.487861 AATCCTCCCATCCTATTTGGTTT 57.512 39.130 0.00 0.00 37.07 3.27
3547 3620 4.249638 TCCTCCCATCCTATTTGGTTTG 57.750 45.455 0.00 0.00 37.07 2.93
3548 3621 3.596046 TCCTCCCATCCTATTTGGTTTGT 59.404 43.478 0.00 0.00 37.07 2.83
3549 3622 4.045334 TCCTCCCATCCTATTTGGTTTGTT 59.955 41.667 0.00 0.00 37.07 2.83
3550 3623 5.254267 TCCTCCCATCCTATTTGGTTTGTTA 59.746 40.000 0.00 0.00 37.07 2.41
3551 3624 5.955355 CCTCCCATCCTATTTGGTTTGTTAA 59.045 40.000 0.00 0.00 37.07 2.01
3552 3625 6.439058 CCTCCCATCCTATTTGGTTTGTTAAA 59.561 38.462 0.00 0.00 37.07 1.52
3553 3626 7.363793 CCTCCCATCCTATTTGGTTTGTTAAAG 60.364 40.741 0.00 0.00 37.07 1.85
3554 3627 7.242359 TCCCATCCTATTTGGTTTGTTAAAGA 58.758 34.615 0.00 0.00 37.07 2.52
3555 3628 7.177744 TCCCATCCTATTTGGTTTGTTAAAGAC 59.822 37.037 0.00 0.00 37.07 3.01
3556 3629 7.178451 CCCATCCTATTTGGTTTGTTAAAGACT 59.822 37.037 0.00 0.00 37.07 3.24
3557 3630 8.585018 CCATCCTATTTGGTTTGTTAAAGACTT 58.415 33.333 0.00 0.00 37.07 3.01
3558 3631 9.981114 CATCCTATTTGGTTTGTTAAAGACTTT 57.019 29.630 5.62 5.62 37.07 2.66
3597 3670 4.465632 AAAAGTCCCTGAAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
3598 3671 2.067365 AGTCCCTGAAACCAAACACC 57.933 50.000 0.00 0.00 0.00 4.16
3599 3672 1.037493 GTCCCTGAAACCAAACACCC 58.963 55.000 0.00 0.00 0.00 4.61
3600 3673 0.105913 TCCCTGAAACCAAACACCCC 60.106 55.000 0.00 0.00 0.00 4.95
3601 3674 1.118965 CCCTGAAACCAAACACCCCC 61.119 60.000 0.00 0.00 0.00 5.40
3602 3675 0.105709 CCTGAAACCAAACACCCCCT 60.106 55.000 0.00 0.00 0.00 4.79
3603 3676 1.691163 CCTGAAACCAAACACCCCCTT 60.691 52.381 0.00 0.00 0.00 3.95
3604 3677 2.425102 CCTGAAACCAAACACCCCCTTA 60.425 50.000 0.00 0.00 0.00 2.69
3605 3678 3.506398 CTGAAACCAAACACCCCCTTAT 58.494 45.455 0.00 0.00 0.00 1.73
3606 3679 3.901222 CTGAAACCAAACACCCCCTTATT 59.099 43.478 0.00 0.00 0.00 1.40
3607 3680 4.299485 TGAAACCAAACACCCCCTTATTT 58.701 39.130 0.00 0.00 0.00 1.40
3608 3681 4.722279 TGAAACCAAACACCCCCTTATTTT 59.278 37.500 0.00 0.00 0.00 1.82
3609 3682 4.967084 AACCAAACACCCCCTTATTTTC 57.033 40.909 0.00 0.00 0.00 2.29
3610 3683 4.207698 ACCAAACACCCCCTTATTTTCT 57.792 40.909 0.00 0.00 0.00 2.52
3611 3684 3.901222 ACCAAACACCCCCTTATTTTCTG 59.099 43.478 0.00 0.00 0.00 3.02
3612 3685 3.901222 CCAAACACCCCCTTATTTTCTGT 59.099 43.478 0.00 0.00 0.00 3.41
3613 3686 4.021456 CCAAACACCCCCTTATTTTCTGTC 60.021 45.833 0.00 0.00 0.00 3.51
3614 3687 3.067684 ACACCCCCTTATTTTCTGTCG 57.932 47.619 0.00 0.00 0.00 4.35
3615 3688 2.374170 ACACCCCCTTATTTTCTGTCGT 59.626 45.455 0.00 0.00 0.00 4.34
3616 3689 2.747446 CACCCCCTTATTTTCTGTCGTG 59.253 50.000 0.00 0.00 0.00 4.35
3617 3690 2.640826 ACCCCCTTATTTTCTGTCGTGA 59.359 45.455 0.00 0.00 0.00 4.35
3618 3691 3.270877 CCCCCTTATTTTCTGTCGTGAG 58.729 50.000 0.00 0.00 0.00 3.51
3619 3692 3.055385 CCCCCTTATTTTCTGTCGTGAGA 60.055 47.826 0.00 0.00 38.16 3.27
3620 3693 4.184629 CCCCTTATTTTCTGTCGTGAGAG 58.815 47.826 0.00 0.00 43.49 3.20
3621 3694 3.619038 CCCTTATTTTCTGTCGTGAGAGC 59.381 47.826 0.00 0.00 43.49 4.09
3622 3695 3.304559 CCTTATTTTCTGTCGTGAGAGCG 59.695 47.826 0.00 0.00 43.49 5.03
3623 3696 2.724977 ATTTTCTGTCGTGAGAGCGA 57.275 45.000 0.00 0.00 43.49 4.93
3624 3697 2.724977 TTTTCTGTCGTGAGAGCGAT 57.275 45.000 0.00 0.00 43.07 4.58
3625 3698 2.264109 TTTCTGTCGTGAGAGCGATC 57.736 50.000 0.00 0.00 43.07 3.69
3626 3699 0.097150 TTCTGTCGTGAGAGCGATCG 59.903 55.000 11.69 11.69 43.07 3.69
3627 3700 1.297967 CTGTCGTGAGAGCGATCGG 60.298 63.158 18.30 0.00 43.07 4.18
3628 3701 2.024871 GTCGTGAGAGCGATCGGG 59.975 66.667 18.30 0.00 43.07 5.14
3629 3702 3.889044 TCGTGAGAGCGATCGGGC 61.889 66.667 18.30 0.05 35.83 6.13
3631 3704 2.279120 GTGAGAGCGATCGGGCTG 60.279 66.667 18.30 0.00 44.93 4.85
3632 3705 4.212913 TGAGAGCGATCGGGCTGC 62.213 66.667 18.30 0.00 44.93 5.25
3633 3706 4.959596 GAGAGCGATCGGGCTGCC 62.960 72.222 18.30 11.05 44.93 4.85
3646 3719 4.457496 CTGCCGATCCGTGGTGCT 62.457 66.667 0.00 0.00 0.00 4.40
3647 3720 4.758251 TGCCGATCCGTGGTGCTG 62.758 66.667 0.00 0.00 0.00 4.41
3649 3722 4.758251 CCGATCCGTGGTGCTGCA 62.758 66.667 0.00 0.00 0.00 4.41
3650 3723 3.190849 CGATCCGTGGTGCTGCAG 61.191 66.667 10.11 10.11 0.00 4.41
3651 3724 3.503363 GATCCGTGGTGCTGCAGC 61.503 66.667 31.89 31.89 42.50 5.25
3654 3727 4.393155 CCGTGGTGCTGCAGCCTA 62.393 66.667 34.64 20.92 41.18 3.93
3655 3728 2.124983 CGTGGTGCTGCAGCCTAT 60.125 61.111 34.64 0.00 41.18 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.881796 GCTAAAGTTGCCCGAAGCTT 59.118 50.000 0.00 0.00 44.23 3.74
93 94 5.008811 CGAACCAACGGATCTTACTCTATCT 59.991 44.000 0.00 0.00 0.00 1.98
96 97 4.627611 CGAACCAACGGATCTTACTCTA 57.372 45.455 0.00 0.00 0.00 2.43
169 170 6.942532 ATGAATATAAAGGCGAAGAAGCAA 57.057 33.333 0.00 0.00 39.27 3.91
179 180 3.821033 AGGGCACGAATGAATATAAAGGC 59.179 43.478 0.00 0.00 0.00 4.35
230 236 0.833949 GGGAAGAAGAGTAGGCAGGG 59.166 60.000 0.00 0.00 0.00 4.45
231 237 1.573108 TGGGAAGAAGAGTAGGCAGG 58.427 55.000 0.00 0.00 0.00 4.85
232 238 3.539604 CAATGGGAAGAAGAGTAGGCAG 58.460 50.000 0.00 0.00 0.00 4.85
238 244 1.707427 ACCAGCAATGGGAAGAAGAGT 59.293 47.619 0.00 0.00 0.00 3.24
242 248 0.968405 GCAACCAGCAATGGGAAGAA 59.032 50.000 0.00 0.00 44.79 2.52
253 259 1.160137 CCTACAGTTGAGCAACCAGC 58.840 55.000 9.56 0.00 42.06 4.85
254 260 2.146342 CACCTACAGTTGAGCAACCAG 58.854 52.381 9.56 5.92 42.06 4.00
255 261 1.765904 TCACCTACAGTTGAGCAACCA 59.234 47.619 9.56 0.00 42.06 3.67
256 262 2.417719 CTCACCTACAGTTGAGCAACC 58.582 52.381 9.56 0.00 42.06 3.77
257 263 1.801178 GCTCACCTACAGTTGAGCAAC 59.199 52.381 20.12 5.24 43.40 4.17
277 283 0.313043 CTTCAACCACAGCAGCAAGG 59.687 55.000 0.00 0.00 0.00 3.61
278 284 0.313043 CCTTCAACCACAGCAGCAAG 59.687 55.000 0.00 0.00 0.00 4.01
279 285 0.106769 TCCTTCAACCACAGCAGCAA 60.107 50.000 0.00 0.00 0.00 3.91
292 301 6.016276 GGAAACAACAAAATAGAGCTCCTTCA 60.016 38.462 10.93 0.00 0.00 3.02
299 308 5.842907 ACCAAGGAAACAACAAAATAGAGC 58.157 37.500 0.00 0.00 0.00 4.09
354 363 3.626028 ACCAAAATCAAGAAGTGCGAC 57.374 42.857 0.00 0.00 0.00 5.19
398 407 1.486310 TGGGAGATTTGGTCGATGGAG 59.514 52.381 0.00 0.00 0.00 3.86
415 424 6.934056 TGACATTAACCTGAAATTGATTGGG 58.066 36.000 0.00 0.00 0.00 4.12
434 443 6.769512 ACCACTAACTTCATACAGTTGACAT 58.230 36.000 0.00 0.00 37.57 3.06
435 444 6.169557 ACCACTAACTTCATACAGTTGACA 57.830 37.500 0.00 0.00 37.57 3.58
436 445 6.482308 ACAACCACTAACTTCATACAGTTGAC 59.518 38.462 0.00 0.00 37.57 3.18
451 460 4.776349 TGAGCAGAGAAAACAACCACTAA 58.224 39.130 0.00 0.00 0.00 2.24
457 466 3.365364 CCGGATTGAGCAGAGAAAACAAC 60.365 47.826 0.00 0.00 0.00 3.32
482 491 6.591448 CCAAGCTCAAAATTAAAATCAGGGAC 59.409 38.462 0.00 0.00 0.00 4.46
483 492 6.295802 CCCAAGCTCAAAATTAAAATCAGGGA 60.296 38.462 0.00 0.00 0.00 4.20
484 493 5.876460 CCCAAGCTCAAAATTAAAATCAGGG 59.124 40.000 0.00 0.00 0.00 4.45
485 494 5.352293 GCCCAAGCTCAAAATTAAAATCAGG 59.648 40.000 0.00 0.00 35.50 3.86
486 495 5.062558 CGCCCAAGCTCAAAATTAAAATCAG 59.937 40.000 0.00 0.00 36.60 2.90
489 498 3.684305 GCGCCCAAGCTCAAAATTAAAAT 59.316 39.130 0.00 0.00 36.60 1.82
565 596 4.815489 CCCCTGGCATCAGCATAG 57.185 61.111 0.00 0.00 44.61 2.23
603 634 6.834168 ACGAGGGAAACATTGTTAAATCAT 57.166 33.333 1.76 0.00 34.38 2.45
619 650 0.561184 AGGTGGGATGATACGAGGGA 59.439 55.000 0.00 0.00 0.00 4.20
621 652 4.682778 TTTTAGGTGGGATGATACGAGG 57.317 45.455 0.00 0.00 0.00 4.63
675 706 3.648339 ATTGCTACCACTTTGCACTTG 57.352 42.857 0.00 0.00 36.37 3.16
773 804 6.867816 TGCTTATTTTGCAACAAGGAGTAATG 59.132 34.615 0.00 0.00 37.51 1.90
844 875 1.154131 CTGACCGACAGCTCGACAG 60.154 63.158 0.00 3.23 43.06 3.51
966 997 1.691196 TTGGCTTCTCCACAAACTGG 58.309 50.000 0.00 0.00 46.55 4.00
968 999 3.960102 TGAATTTGGCTTCTCCACAAACT 59.040 39.130 0.00 0.00 46.55 2.66
996 1027 4.925861 GCGGAGGAGCCCATGAGC 62.926 72.222 0.00 0.00 0.00 4.26
1011 1042 1.810441 CCTGCTTCTGCTCTCAGCG 60.810 63.158 0.00 0.00 46.26 5.18
1012 1043 0.178533 ATCCTGCTTCTGCTCTCAGC 59.821 55.000 0.00 0.00 42.82 4.26
1321 1352 2.105930 GATCTCGCCGAGCAGCTT 59.894 61.111 9.77 0.00 0.00 3.74
1509 1540 3.032609 GCGATCATCTGGACGCCG 61.033 66.667 0.00 0.00 44.27 6.46
1635 1666 2.519013 GAGCCAGAAATGTTTCCCACT 58.481 47.619 2.04 0.00 37.92 4.00
1710 1741 3.511595 AGCGCAATCATGGCACCG 61.512 61.111 11.47 0.00 0.00 4.94
1737 1768 0.238553 GCAAGAAGAGAAACACGGCC 59.761 55.000 0.00 0.00 0.00 6.13
1749 1780 3.008330 CTCAGGATCAACAGGCAAGAAG 58.992 50.000 0.00 0.00 0.00 2.85
1767 1798 4.289101 TCGACCCCGACCACCTCA 62.289 66.667 0.00 0.00 40.30 3.86
1774 1805 2.123812 ATCCTCCTCGACCCCGAC 60.124 66.667 0.00 0.00 40.30 4.79
1776 1807 3.288290 CGATCCTCCTCGACCCCG 61.288 72.222 0.00 0.00 41.12 5.73
1779 1810 2.203771 ATGGCGATCCTCCTCGACC 61.204 63.158 0.00 0.00 46.28 4.79
1971 2002 1.347707 CCTGTGTGGCTGAGGTAGAAA 59.652 52.381 0.00 0.00 0.00 2.52
2048 2101 1.340211 ACAAAACGGTGGTCAGGTCAA 60.340 47.619 0.00 0.00 0.00 3.18
2238 2291 0.103208 AGAAGAAGAGCGCCGGTATG 59.897 55.000 2.29 0.00 0.00 2.39
2544 2597 4.079850 AGCCTCGACAGCAGCAGG 62.080 66.667 5.55 0.00 0.00 4.85
2694 2747 3.402681 CCACCCTCCTCGTGCCAT 61.403 66.667 0.00 0.00 0.00 4.40
2712 2765 4.447342 ATTTCCCAGCCCCGCCTG 62.447 66.667 0.00 0.00 0.00 4.85
2713 2766 4.129148 GATTTCCCAGCCCCGCCT 62.129 66.667 0.00 0.00 0.00 5.52
2716 2769 4.875713 CCCGATTTCCCAGCCCCG 62.876 72.222 0.00 0.00 0.00 5.73
2717 2770 3.416880 TCCCGATTTCCCAGCCCC 61.417 66.667 0.00 0.00 0.00 5.80
2722 2775 2.674754 GCACCTCCCGATTTCCCA 59.325 61.111 0.00 0.00 0.00 4.37
2759 2812 1.270625 ACACGGAAAATCAGAGCGGAA 60.271 47.619 0.00 0.00 0.00 4.30
2763 2816 4.113354 CCTACTACACGGAAAATCAGAGC 58.887 47.826 0.00 0.00 0.00 4.09
2834 2899 2.346244 TCGAATTCGGCGTAACAATCAC 59.654 45.455 26.47 0.00 40.29 3.06
2835 2900 2.346244 GTCGAATTCGGCGTAACAATCA 59.654 45.455 26.47 0.62 40.29 2.57
2836 2901 2.285428 GGTCGAATTCGGCGTAACAATC 60.285 50.000 26.47 6.66 46.26 2.67
2837 2902 1.662122 GGTCGAATTCGGCGTAACAAT 59.338 47.619 26.47 0.00 46.26 2.71
2853 2918 1.876714 CCGCACTGTTATCCGGTCG 60.877 63.158 0.00 0.00 36.18 4.79
2855 2920 0.539986 AATCCGCACTGTTATCCGGT 59.460 50.000 0.00 0.00 41.38 5.28
2856 2921 2.519377 TAATCCGCACTGTTATCCGG 57.481 50.000 0.00 0.00 41.97 5.14
2941 3009 3.309410 GCTGATACTGCAAAAGAGAGAGC 59.691 47.826 0.00 0.00 0.00 4.09
2991 3059 6.148150 CCGAAGTGGCTACAAATTTAGTACAA 59.852 38.462 2.02 0.00 0.00 2.41
3128 3201 4.143639 CGACCACATAAAATTGTGCGTTTG 60.144 41.667 0.00 0.00 44.53 2.93
3133 3206 4.153958 TGACGACCACATAAAATTGTGC 57.846 40.909 0.00 0.00 44.53 4.57
3143 3216 5.766150 TTTTTCTTTGATGACGACCACAT 57.234 34.783 0.00 0.00 0.00 3.21
3153 3226 5.934043 GGTCCCCTTCAATTTTTCTTTGATG 59.066 40.000 0.00 0.00 33.37 3.07
3177 3250 2.174835 CGTTTTACGCCGGCCTTG 59.825 61.111 23.46 9.96 33.65 3.61
3210 3283 8.145122 GCTCCTAATTAGCTGAGTTATACTGTT 58.855 37.037 15.81 0.00 37.01 3.16
3211 3284 7.256012 GGCTCCTAATTAGCTGAGTTATACTGT 60.256 40.741 15.81 0.00 39.97 3.55
3212 3285 7.039363 AGGCTCCTAATTAGCTGAGTTATACTG 60.039 40.741 15.81 0.00 39.97 2.74
3213 3286 7.013834 AGGCTCCTAATTAGCTGAGTTATACT 58.986 38.462 15.81 7.70 39.97 2.12
3214 3287 7.234661 AGGCTCCTAATTAGCTGAGTTATAC 57.765 40.000 15.81 4.00 39.97 1.47
3215 3288 6.437793 GGAGGCTCCTAATTAGCTGAGTTATA 59.562 42.308 26.44 0.00 39.97 0.98
3216 3289 5.247337 GGAGGCTCCTAATTAGCTGAGTTAT 59.753 44.000 26.44 6.48 39.97 1.89
3217 3290 4.589374 GGAGGCTCCTAATTAGCTGAGTTA 59.411 45.833 26.44 0.00 39.97 2.24
3218 3291 3.389656 GGAGGCTCCTAATTAGCTGAGTT 59.610 47.826 26.44 8.24 39.97 3.01
3219 3292 2.969262 GGAGGCTCCTAATTAGCTGAGT 59.031 50.000 26.44 0.00 39.97 3.41
3220 3293 2.968574 TGGAGGCTCCTAATTAGCTGAG 59.031 50.000 32.28 10.07 39.97 3.35
3221 3294 3.046283 TGGAGGCTCCTAATTAGCTGA 57.954 47.619 32.28 6.95 39.97 4.26
3222 3295 4.530161 ACTATGGAGGCTCCTAATTAGCTG 59.470 45.833 32.28 14.56 39.97 4.24
3223 3296 4.530161 CACTATGGAGGCTCCTAATTAGCT 59.470 45.833 32.28 14.99 39.97 3.32
3224 3297 4.528596 TCACTATGGAGGCTCCTAATTAGC 59.471 45.833 32.28 5.66 37.46 3.09
3225 3298 6.865834 ATCACTATGGAGGCTCCTAATTAG 57.134 41.667 32.28 25.61 37.46 1.73
3226 3299 7.453393 CAAATCACTATGGAGGCTCCTAATTA 58.547 38.462 32.28 13.97 37.46 1.40
3227 3300 6.302269 CAAATCACTATGGAGGCTCCTAATT 58.698 40.000 32.28 18.52 37.46 1.40
3228 3301 5.222007 CCAAATCACTATGGAGGCTCCTAAT 60.222 44.000 32.28 21.23 39.12 1.73
3229 3302 4.103153 CCAAATCACTATGGAGGCTCCTAA 59.897 45.833 32.28 19.55 39.12 2.69
3230 3303 3.648067 CCAAATCACTATGGAGGCTCCTA 59.352 47.826 32.28 19.73 39.12 2.94
3231 3304 2.441001 CCAAATCACTATGGAGGCTCCT 59.559 50.000 32.28 20.32 39.12 3.69
3232 3305 2.487986 CCCAAATCACTATGGAGGCTCC 60.488 54.545 26.95 26.95 39.12 4.70
3233 3306 2.439507 TCCCAAATCACTATGGAGGCTC 59.560 50.000 5.78 5.78 39.12 4.70
3234 3307 2.492025 TCCCAAATCACTATGGAGGCT 58.508 47.619 0.00 0.00 39.12 4.58
3235 3308 3.416156 GATCCCAAATCACTATGGAGGC 58.584 50.000 0.00 0.00 39.12 4.70
3236 3309 3.654806 AGGATCCCAAATCACTATGGAGG 59.345 47.826 8.55 0.00 39.12 4.30
3237 3310 4.989875 AGGATCCCAAATCACTATGGAG 57.010 45.455 8.55 0.00 39.12 3.86
3238 3311 6.410388 GGTTTAGGATCCCAAATCACTATGGA 60.410 42.308 10.66 0.00 39.12 3.41
3239 3312 5.770162 GGTTTAGGATCCCAAATCACTATGG 59.230 44.000 10.66 0.00 36.42 2.74
3240 3313 5.470098 CGGTTTAGGATCCCAAATCACTATG 59.530 44.000 15.08 0.00 0.00 2.23
3241 3314 5.132144 ACGGTTTAGGATCCCAAATCACTAT 59.868 40.000 15.08 0.00 0.00 2.12
3242 3315 4.472108 ACGGTTTAGGATCCCAAATCACTA 59.528 41.667 15.08 0.00 0.00 2.74
3243 3316 3.265995 ACGGTTTAGGATCCCAAATCACT 59.734 43.478 15.08 0.00 0.00 3.41
3244 3317 3.617284 ACGGTTTAGGATCCCAAATCAC 58.383 45.455 15.08 5.98 0.00 3.06
3245 3318 3.371166 GGACGGTTTAGGATCCCAAATCA 60.371 47.826 15.08 0.00 0.00 2.57
3246 3319 3.211865 GGACGGTTTAGGATCCCAAATC 58.788 50.000 8.55 7.02 0.00 2.17
3247 3320 2.420967 CGGACGGTTTAGGATCCCAAAT 60.421 50.000 8.55 0.00 0.00 2.32
3248 3321 1.065998 CGGACGGTTTAGGATCCCAAA 60.066 52.381 8.55 4.34 0.00 3.28
3249 3322 0.538118 CGGACGGTTTAGGATCCCAA 59.462 55.000 8.55 0.00 0.00 4.12
3250 3323 0.324552 TCGGACGGTTTAGGATCCCA 60.325 55.000 8.55 0.00 0.00 4.37
3251 3324 1.046204 ATCGGACGGTTTAGGATCCC 58.954 55.000 8.55 0.00 0.00 3.85
3252 3325 2.904697 AATCGGACGGTTTAGGATCC 57.095 50.000 2.48 2.48 0.00 3.36
3253 3326 3.739810 GCTTAATCGGACGGTTTAGGATC 59.260 47.826 5.97 0.00 0.00 3.36
3254 3327 3.725490 GCTTAATCGGACGGTTTAGGAT 58.275 45.455 5.97 0.00 0.00 3.24
3255 3328 2.480073 CGCTTAATCGGACGGTTTAGGA 60.480 50.000 5.97 0.00 0.00 2.94
3256 3329 1.856597 CGCTTAATCGGACGGTTTAGG 59.143 52.381 5.97 1.10 0.00 2.69
3257 3330 2.533266 ACGCTTAATCGGACGGTTTAG 58.467 47.619 3.51 0.00 0.00 1.85
3258 3331 2.652941 ACGCTTAATCGGACGGTTTA 57.347 45.000 3.51 0.00 0.00 2.01
3259 3332 2.652941 TACGCTTAATCGGACGGTTT 57.347 45.000 3.51 0.00 0.00 3.27
3260 3333 2.877043 ATACGCTTAATCGGACGGTT 57.123 45.000 3.51 0.00 0.00 4.44
3261 3334 3.988379 TTATACGCTTAATCGGACGGT 57.012 42.857 3.51 0.00 0.00 4.83
3262 3335 3.118482 CGTTTATACGCTTAATCGGACGG 59.882 47.826 3.51 0.00 41.41 4.79
3263 3336 4.270113 CGTTTATACGCTTAATCGGACG 57.730 45.455 3.51 2.45 41.41 4.79
3276 3349 7.329717 GGATGGAATGATCTCACTCGTTTATAC 59.670 40.741 0.00 0.00 0.00 1.47
3277 3350 7.233553 AGGATGGAATGATCTCACTCGTTTATA 59.766 37.037 0.00 0.00 0.00 0.98
3278 3351 6.042552 AGGATGGAATGATCTCACTCGTTTAT 59.957 38.462 0.00 0.00 0.00 1.40
3279 3352 5.363868 AGGATGGAATGATCTCACTCGTTTA 59.636 40.000 0.00 0.00 0.00 2.01
3280 3353 4.163078 AGGATGGAATGATCTCACTCGTTT 59.837 41.667 0.00 0.00 0.00 3.60
3281 3354 3.708631 AGGATGGAATGATCTCACTCGTT 59.291 43.478 0.00 0.00 0.00 3.85
3282 3355 3.303938 AGGATGGAATGATCTCACTCGT 58.696 45.455 0.00 0.00 0.00 4.18
3283 3356 3.573538 AGAGGATGGAATGATCTCACTCG 59.426 47.826 0.00 0.00 0.00 4.18
3284 3357 4.321156 CGAGAGGATGGAATGATCTCACTC 60.321 50.000 0.00 0.00 35.36 3.51
3285 3358 3.573538 CGAGAGGATGGAATGATCTCACT 59.426 47.826 0.00 0.00 35.36 3.41
3286 3359 3.320541 ACGAGAGGATGGAATGATCTCAC 59.679 47.826 0.00 0.00 35.36 3.51
3287 3360 3.570540 ACGAGAGGATGGAATGATCTCA 58.429 45.455 0.00 0.00 35.36 3.27
3288 3361 4.380444 GCTACGAGAGGATGGAATGATCTC 60.380 50.000 0.00 0.00 33.39 2.75
3289 3362 3.509575 GCTACGAGAGGATGGAATGATCT 59.490 47.826 0.00 0.00 0.00 2.75
3290 3363 3.256879 TGCTACGAGAGGATGGAATGATC 59.743 47.826 0.00 0.00 0.00 2.92
3291 3364 3.234353 TGCTACGAGAGGATGGAATGAT 58.766 45.455 0.00 0.00 0.00 2.45
3292 3365 2.666317 TGCTACGAGAGGATGGAATGA 58.334 47.619 0.00 0.00 0.00 2.57
3293 3366 3.674528 ATGCTACGAGAGGATGGAATG 57.325 47.619 0.00 0.00 34.37 2.67
3294 3367 3.643320 TGAATGCTACGAGAGGATGGAAT 59.357 43.478 0.00 0.00 36.14 3.01
3295 3368 3.031013 TGAATGCTACGAGAGGATGGAA 58.969 45.455 0.00 0.00 36.14 3.53
3296 3369 2.666317 TGAATGCTACGAGAGGATGGA 58.334 47.619 0.00 0.00 36.14 3.41
3297 3370 3.674528 ATGAATGCTACGAGAGGATGG 57.325 47.619 0.00 0.00 36.14 3.51
3298 3371 4.319333 GCAAATGAATGCTACGAGAGGATG 60.319 45.833 0.00 0.00 43.06 3.51
3299 3372 3.812053 GCAAATGAATGCTACGAGAGGAT 59.188 43.478 0.00 0.00 43.06 3.24
3300 3373 3.198068 GCAAATGAATGCTACGAGAGGA 58.802 45.455 0.00 0.00 43.06 3.71
3301 3374 2.033407 CGCAAATGAATGCTACGAGAGG 60.033 50.000 0.00 0.00 44.21 3.69
3302 3375 2.598439 GCGCAAATGAATGCTACGAGAG 60.598 50.000 0.30 0.00 44.21 3.20
3303 3376 1.327460 GCGCAAATGAATGCTACGAGA 59.673 47.619 0.30 0.00 44.21 4.04
3304 3377 1.595489 GGCGCAAATGAATGCTACGAG 60.595 52.381 10.83 0.00 44.21 4.18
3305 3378 0.376852 GGCGCAAATGAATGCTACGA 59.623 50.000 10.83 0.00 44.21 3.43
3306 3379 0.378257 AGGCGCAAATGAATGCTACG 59.622 50.000 10.83 0.00 44.21 3.51
3307 3380 1.133025 ACAGGCGCAAATGAATGCTAC 59.867 47.619 10.83 0.00 44.21 3.58
3308 3381 1.462616 ACAGGCGCAAATGAATGCTA 58.537 45.000 10.83 0.00 44.21 3.49
3309 3382 0.604578 AACAGGCGCAAATGAATGCT 59.395 45.000 10.83 0.00 44.21 3.79
3310 3383 0.994263 GAACAGGCGCAAATGAATGC 59.006 50.000 10.83 0.00 42.94 3.56
3311 3384 1.261989 CGAACAGGCGCAAATGAATG 58.738 50.000 10.83 0.00 0.00 2.67
3312 3385 3.700577 CGAACAGGCGCAAATGAAT 57.299 47.368 10.83 0.00 0.00 2.57
3321 3394 2.720758 CGACTTCAGCGAACAGGCG 61.721 63.158 0.00 0.00 38.18 5.52
3322 3395 0.944311 TTCGACTTCAGCGAACAGGC 60.944 55.000 0.00 0.00 42.17 4.85
3323 3396 3.195041 TTCGACTTCAGCGAACAGG 57.805 52.632 0.00 0.00 42.17 4.00
3327 3400 1.214367 GTTGGTTCGACTTCAGCGAA 58.786 50.000 0.00 0.00 44.48 4.70
3328 3401 0.103390 TGTTGGTTCGACTTCAGCGA 59.897 50.000 0.00 0.00 35.76 4.93
3329 3402 1.126846 GATGTTGGTTCGACTTCAGCG 59.873 52.381 0.00 0.00 0.00 5.18
3330 3403 2.143122 TGATGTTGGTTCGACTTCAGC 58.857 47.619 0.00 0.00 31.31 4.26
3331 3404 4.811555 TTTGATGTTGGTTCGACTTCAG 57.188 40.909 0.00 0.00 34.76 3.02
3332 3405 4.036262 CCTTTTGATGTTGGTTCGACTTCA 59.964 41.667 0.00 0.00 32.48 3.02
3333 3406 4.537015 CCTTTTGATGTTGGTTCGACTTC 58.463 43.478 0.00 0.00 0.00 3.01
3334 3407 3.317993 CCCTTTTGATGTTGGTTCGACTT 59.682 43.478 0.00 0.00 0.00 3.01
3335 3408 2.884639 CCCTTTTGATGTTGGTTCGACT 59.115 45.455 0.00 0.00 0.00 4.18
3336 3409 2.607038 GCCCTTTTGATGTTGGTTCGAC 60.607 50.000 0.00 0.00 0.00 4.20
3337 3410 1.611491 GCCCTTTTGATGTTGGTTCGA 59.389 47.619 0.00 0.00 0.00 3.71
3338 3411 1.336795 GGCCCTTTTGATGTTGGTTCG 60.337 52.381 0.00 0.00 0.00 3.95
3339 3412 1.336795 CGGCCCTTTTGATGTTGGTTC 60.337 52.381 0.00 0.00 0.00 3.62
3340 3413 0.678950 CGGCCCTTTTGATGTTGGTT 59.321 50.000 0.00 0.00 0.00 3.67
3341 3414 1.815817 GCGGCCCTTTTGATGTTGGT 61.816 55.000 0.00 0.00 0.00 3.67
3342 3415 1.079888 GCGGCCCTTTTGATGTTGG 60.080 57.895 0.00 0.00 0.00 3.77
3343 3416 0.388907 CAGCGGCCCTTTTGATGTTG 60.389 55.000 0.00 0.00 0.00 3.33
3344 3417 1.966762 CAGCGGCCCTTTTGATGTT 59.033 52.632 0.00 0.00 0.00 2.71
3345 3418 2.639327 GCAGCGGCCCTTTTGATGT 61.639 57.895 0.00 0.00 0.00 3.06
3346 3419 2.182537 GCAGCGGCCCTTTTGATG 59.817 61.111 0.00 0.00 0.00 3.07
3347 3420 2.036256 AGCAGCGGCCCTTTTGAT 59.964 55.556 4.82 0.00 42.56 2.57
3348 3421 2.672996 GAGCAGCGGCCCTTTTGA 60.673 61.111 4.82 0.00 42.56 2.69
3349 3422 3.752339 GGAGCAGCGGCCCTTTTG 61.752 66.667 4.82 0.00 42.56 2.44
3363 3436 2.208431 CTCAGAAATAAGCCTGCGGAG 58.792 52.381 0.00 0.00 0.00 4.63
3364 3437 1.743772 GCTCAGAAATAAGCCTGCGGA 60.744 52.381 0.00 0.00 0.00 5.54
3365 3438 0.659957 GCTCAGAAATAAGCCTGCGG 59.340 55.000 0.00 0.00 0.00 5.69
3366 3439 0.659957 GGCTCAGAAATAAGCCTGCG 59.340 55.000 6.15 0.00 43.58 5.18
3371 3444 4.940654 ACTTCAGAAGGCTCAGAAATAAGC 59.059 41.667 14.90 0.00 0.00 3.09
3372 3445 7.277539 CAGTACTTCAGAAGGCTCAGAAATAAG 59.722 40.741 14.90 0.00 0.00 1.73
3373 3446 7.099764 CAGTACTTCAGAAGGCTCAGAAATAA 58.900 38.462 14.90 0.00 0.00 1.40
3374 3447 6.351371 CCAGTACTTCAGAAGGCTCAGAAATA 60.351 42.308 14.90 0.00 0.00 1.40
3375 3448 5.486526 CAGTACTTCAGAAGGCTCAGAAAT 58.513 41.667 14.90 0.00 0.00 2.17
3376 3449 4.262635 CCAGTACTTCAGAAGGCTCAGAAA 60.263 45.833 14.90 0.00 0.00 2.52
3377 3450 3.259374 CCAGTACTTCAGAAGGCTCAGAA 59.741 47.826 14.90 0.00 0.00 3.02
3378 3451 2.828520 CCAGTACTTCAGAAGGCTCAGA 59.171 50.000 14.90 0.00 0.00 3.27
3379 3452 2.093764 CCCAGTACTTCAGAAGGCTCAG 60.094 54.545 14.90 6.03 0.00 3.35
3380 3453 1.902508 CCCAGTACTTCAGAAGGCTCA 59.097 52.381 14.90 0.00 0.00 4.26
3381 3454 1.903183 ACCCAGTACTTCAGAAGGCTC 59.097 52.381 14.90 4.56 0.00 4.70
3382 3455 2.031495 ACCCAGTACTTCAGAAGGCT 57.969 50.000 14.90 9.07 0.00 4.58
3383 3456 2.224548 ACAACCCAGTACTTCAGAAGGC 60.225 50.000 14.90 6.96 0.00 4.35
3384 3457 3.071023 TCACAACCCAGTACTTCAGAAGG 59.929 47.826 14.90 0.00 0.00 3.46
3385 3458 4.310769 CTCACAACCCAGTACTTCAGAAG 58.689 47.826 8.77 8.77 0.00 2.85
3386 3459 3.071023 CCTCACAACCCAGTACTTCAGAA 59.929 47.826 0.00 0.00 0.00 3.02
3387 3460 2.632996 CCTCACAACCCAGTACTTCAGA 59.367 50.000 0.00 0.00 0.00 3.27
3388 3461 2.368875 ACCTCACAACCCAGTACTTCAG 59.631 50.000 0.00 0.00 0.00 3.02
3389 3462 2.367567 GACCTCACAACCCAGTACTTCA 59.632 50.000 0.00 0.00 0.00 3.02
3390 3463 2.609737 CGACCTCACAACCCAGTACTTC 60.610 54.545 0.00 0.00 0.00 3.01
3391 3464 1.343465 CGACCTCACAACCCAGTACTT 59.657 52.381 0.00 0.00 0.00 2.24
3392 3465 0.966920 CGACCTCACAACCCAGTACT 59.033 55.000 0.00 0.00 0.00 2.73
3393 3466 0.037605 CCGACCTCACAACCCAGTAC 60.038 60.000 0.00 0.00 0.00 2.73
3394 3467 1.823169 GCCGACCTCACAACCCAGTA 61.823 60.000 0.00 0.00 0.00 2.74
3395 3468 3.148084 CCGACCTCACAACCCAGT 58.852 61.111 0.00 0.00 0.00 4.00
3396 3469 2.358737 GCCGACCTCACAACCCAG 60.359 66.667 0.00 0.00 0.00 4.45
3397 3470 3.948719 GGCCGACCTCACAACCCA 61.949 66.667 0.00 0.00 0.00 4.51
3411 3484 4.832608 CTAAGTCACCGGGCGGCC 62.833 72.222 20.04 20.04 39.32 6.13
3412 3485 4.832608 CCTAAGTCACCGGGCGGC 62.833 72.222 6.32 0.00 39.32 6.53
3413 3486 3.387947 ACCTAAGTCACCGGGCGG 61.388 66.667 6.32 0.00 42.03 6.13
3414 3487 2.125673 CACCTAAGTCACCGGGCG 60.126 66.667 6.32 0.00 0.00 6.13
3415 3488 2.267961 CCACCTAAGTCACCGGGC 59.732 66.667 6.32 0.00 0.00 6.13
3416 3489 1.295423 CACCACCTAAGTCACCGGG 59.705 63.158 6.32 0.00 0.00 5.73
3417 3490 0.395312 AACACCACCTAAGTCACCGG 59.605 55.000 0.00 0.00 0.00 5.28
3418 3491 1.871039 CAAACACCACCTAAGTCACCG 59.129 52.381 0.00 0.00 0.00 4.94
3419 3492 2.227194 CCAAACACCACCTAAGTCACC 58.773 52.381 0.00 0.00 0.00 4.02
3420 3493 2.927028 ACCAAACACCACCTAAGTCAC 58.073 47.619 0.00 0.00 0.00 3.67
3421 3494 3.201266 AGAACCAAACACCACCTAAGTCA 59.799 43.478 0.00 0.00 0.00 3.41
3422 3495 3.813724 GAGAACCAAACACCACCTAAGTC 59.186 47.826 0.00 0.00 0.00 3.01
3423 3496 3.458487 AGAGAACCAAACACCACCTAAGT 59.542 43.478 0.00 0.00 0.00 2.24
3424 3497 4.086706 AGAGAACCAAACACCACCTAAG 57.913 45.455 0.00 0.00 0.00 2.18
3425 3498 4.657039 ACTAGAGAACCAAACACCACCTAA 59.343 41.667 0.00 0.00 0.00 2.69
3426 3499 4.228824 ACTAGAGAACCAAACACCACCTA 58.771 43.478 0.00 0.00 0.00 3.08
3427 3500 3.046374 ACTAGAGAACCAAACACCACCT 58.954 45.455 0.00 0.00 0.00 4.00
3428 3501 3.400255 GACTAGAGAACCAAACACCACC 58.600 50.000 0.00 0.00 0.00 4.61
3429 3502 3.071167 AGGACTAGAGAACCAAACACCAC 59.929 47.826 0.00 0.00 0.00 4.16
3430 3503 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
3431 3504 4.081586 CCTAGGACTAGAGAACCAAACACC 60.082 50.000 1.05 0.00 35.21 4.16
3432 3505 4.771054 TCCTAGGACTAGAGAACCAAACAC 59.229 45.833 7.62 0.00 35.21 3.32
3433 3506 5.006896 TCCTAGGACTAGAGAACCAAACA 57.993 43.478 7.62 0.00 35.21 2.83
3434 3507 5.997384 TTCCTAGGACTAGAGAACCAAAC 57.003 43.478 12.22 0.00 35.21 2.93
3435 3508 7.569599 AAATTCCTAGGACTAGAGAACCAAA 57.430 36.000 12.22 0.00 35.21 3.28
3436 3509 7.569599 AAAATTCCTAGGACTAGAGAACCAA 57.430 36.000 12.22 0.00 35.21 3.67
3437 3510 7.458170 AGAAAAATTCCTAGGACTAGAGAACCA 59.542 37.037 12.22 0.00 35.21 3.67
3438 3511 7.853299 AGAAAAATTCCTAGGACTAGAGAACC 58.147 38.462 12.22 0.00 35.21 3.62
3440 3513 9.771140 ACTAGAAAAATTCCTAGGACTAGAGAA 57.229 33.333 26.82 8.75 37.32 2.87
3441 3514 9.411189 GACTAGAAAAATTCCTAGGACTAGAGA 57.589 37.037 26.82 9.39 37.32 3.10
3442 3515 9.416284 AGACTAGAAAAATTCCTAGGACTAGAG 57.584 37.037 26.82 12.97 37.32 2.43
3443 3516 9.771140 AAGACTAGAAAAATTCCTAGGACTAGA 57.229 33.333 26.82 10.36 37.32 2.43
3446 3519 8.103935 CCAAAGACTAGAAAAATTCCTAGGACT 58.896 37.037 12.22 2.58 37.32 3.85
3447 3520 7.337184 CCCAAAGACTAGAAAAATTCCTAGGAC 59.663 40.741 12.22 0.00 37.32 3.85
3448 3521 7.238933 TCCCAAAGACTAGAAAAATTCCTAGGA 59.761 37.037 7.62 7.62 37.32 2.94
3449 3522 7.337184 GTCCCAAAGACTAGAAAAATTCCTAGG 59.663 40.741 0.82 0.82 42.69 3.02
3450 3523 8.270080 GTCCCAAAGACTAGAAAAATTCCTAG 57.730 38.462 0.00 0.00 42.69 3.02
3483 3556 5.506686 GAAGCACCTTCTTGAGAGTTTTT 57.493 39.130 0.00 0.00 37.49 1.94
3495 3568 2.498644 AAGCCCTTAGAAGCACCTTC 57.501 50.000 0.00 0.00 40.45 3.46
3496 3569 2.980246 AAAGCCCTTAGAAGCACCTT 57.020 45.000 0.00 0.00 0.00 3.50
3497 3570 2.980246 AAAAGCCCTTAGAAGCACCT 57.020 45.000 0.00 0.00 0.00 4.00
3498 3571 3.824443 TGTTAAAAGCCCTTAGAAGCACC 59.176 43.478 0.00 0.00 0.00 5.01
3499 3572 5.447624 TTGTTAAAAGCCCTTAGAAGCAC 57.552 39.130 0.00 0.00 0.00 4.40
3500 3573 6.472686 TTTTGTTAAAAGCCCTTAGAAGCA 57.527 33.333 0.00 0.00 0.00 3.91
3521 3594 5.853700 ACCAAATAGGATGGGAGGATTTTT 58.146 37.500 0.00 0.00 42.48 1.94
3522 3595 5.487861 ACCAAATAGGATGGGAGGATTTT 57.512 39.130 0.00 0.00 42.48 1.82
3523 3596 5.487861 AACCAAATAGGATGGGAGGATTT 57.512 39.130 0.00 0.00 42.48 2.17
3524 3597 5.211201 CAAACCAAATAGGATGGGAGGATT 58.789 41.667 0.00 0.00 42.48 3.01
3525 3598 4.232820 ACAAACCAAATAGGATGGGAGGAT 59.767 41.667 0.00 0.00 42.48 3.24
3526 3599 3.596046 ACAAACCAAATAGGATGGGAGGA 59.404 43.478 0.00 0.00 42.48 3.71
3527 3600 3.981212 ACAAACCAAATAGGATGGGAGG 58.019 45.455 0.00 0.00 42.48 4.30
3528 3601 7.396055 TCTTTAACAAACCAAATAGGATGGGAG 59.604 37.037 0.00 0.00 42.48 4.30
3529 3602 7.177744 GTCTTTAACAAACCAAATAGGATGGGA 59.822 37.037 0.00 0.00 42.48 4.37
3530 3603 7.178451 AGTCTTTAACAAACCAAATAGGATGGG 59.822 37.037 0.00 0.00 42.48 4.00
3531 3604 8.122472 AGTCTTTAACAAACCAAATAGGATGG 57.878 34.615 0.00 0.00 43.84 3.51
3532 3605 9.981114 AAAGTCTTTAACAAACCAAATAGGATG 57.019 29.630 0.00 0.00 41.22 3.51
3575 3648 4.323180 GGTGTTTGGTTTCAGGGACTTTTT 60.323 41.667 0.00 0.00 34.60 1.94
3576 3649 3.196901 GGTGTTTGGTTTCAGGGACTTTT 59.803 43.478 0.00 0.00 34.60 2.27
3577 3650 2.764010 GGTGTTTGGTTTCAGGGACTTT 59.236 45.455 0.00 0.00 34.60 2.66
3578 3651 2.384828 GGTGTTTGGTTTCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
3579 3652 1.411074 GGGTGTTTGGTTTCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
3580 3653 1.037493 GGGTGTTTGGTTTCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
3581 3654 0.105913 GGGGTGTTTGGTTTCAGGGA 60.106 55.000 0.00 0.00 0.00 4.20
3582 3655 1.118965 GGGGGTGTTTGGTTTCAGGG 61.119 60.000 0.00 0.00 0.00 4.45
3583 3656 0.105709 AGGGGGTGTTTGGTTTCAGG 60.106 55.000 0.00 0.00 0.00 3.86
3584 3657 1.788229 AAGGGGGTGTTTGGTTTCAG 58.212 50.000 0.00 0.00 0.00 3.02
3585 3658 3.621682 ATAAGGGGGTGTTTGGTTTCA 57.378 42.857 0.00 0.00 0.00 2.69
3586 3659 4.967084 AAATAAGGGGGTGTTTGGTTTC 57.033 40.909 0.00 0.00 0.00 2.78
3587 3660 4.972568 AGAAAATAAGGGGGTGTTTGGTTT 59.027 37.500 0.00 0.00 0.00 3.27
3588 3661 4.346709 CAGAAAATAAGGGGGTGTTTGGTT 59.653 41.667 0.00 0.00 0.00 3.67
3589 3662 3.901222 CAGAAAATAAGGGGGTGTTTGGT 59.099 43.478 0.00 0.00 0.00 3.67
3590 3663 3.901222 ACAGAAAATAAGGGGGTGTTTGG 59.099 43.478 0.00 0.00 0.00 3.28
3591 3664 4.320935 CGACAGAAAATAAGGGGGTGTTTG 60.321 45.833 0.00 0.00 0.00 2.93
3592 3665 3.824443 CGACAGAAAATAAGGGGGTGTTT 59.176 43.478 0.00 0.00 0.00 2.83
3593 3666 3.181437 ACGACAGAAAATAAGGGGGTGTT 60.181 43.478 0.00 0.00 0.00 3.32
3594 3667 2.374170 ACGACAGAAAATAAGGGGGTGT 59.626 45.455 0.00 0.00 0.00 4.16
3595 3668 2.747446 CACGACAGAAAATAAGGGGGTG 59.253 50.000 0.00 0.00 0.00 4.61
3596 3669 2.640826 TCACGACAGAAAATAAGGGGGT 59.359 45.455 0.00 0.00 0.00 4.95
3597 3670 3.055385 TCTCACGACAGAAAATAAGGGGG 60.055 47.826 0.00 0.00 0.00 5.40
3598 3671 4.184629 CTCTCACGACAGAAAATAAGGGG 58.815 47.826 0.00 0.00 0.00 4.79
3599 3672 3.619038 GCTCTCACGACAGAAAATAAGGG 59.381 47.826 0.00 0.00 0.00 3.95
3600 3673 3.304559 CGCTCTCACGACAGAAAATAAGG 59.695 47.826 0.00 0.00 34.06 2.69
3601 3674 4.166523 TCGCTCTCACGACAGAAAATAAG 58.833 43.478 0.00 0.00 37.09 1.73
3602 3675 4.168922 TCGCTCTCACGACAGAAAATAA 57.831 40.909 0.00 0.00 37.09 1.40
3603 3676 3.842732 TCGCTCTCACGACAGAAAATA 57.157 42.857 0.00 0.00 37.09 1.40
3604 3677 2.724977 TCGCTCTCACGACAGAAAAT 57.275 45.000 0.00 0.00 37.09 1.82
3605 3678 2.596452 GATCGCTCTCACGACAGAAAA 58.404 47.619 0.00 0.00 46.28 2.29
3606 3679 1.465856 CGATCGCTCTCACGACAGAAA 60.466 52.381 0.26 0.00 46.28 2.52
3607 3680 0.097150 CGATCGCTCTCACGACAGAA 59.903 55.000 0.26 0.00 46.28 3.02
3608 3681 1.706287 CCGATCGCTCTCACGACAGA 61.706 60.000 10.32 0.00 46.28 3.41
3609 3682 1.297967 CCGATCGCTCTCACGACAG 60.298 63.158 10.32 0.00 46.28 3.51
3610 3683 2.761195 CCCGATCGCTCTCACGACA 61.761 63.158 10.32 0.00 46.28 4.35
3611 3684 2.024871 CCCGATCGCTCTCACGAC 59.975 66.667 10.32 0.00 46.28 4.34
3613 3686 3.893763 AGCCCGATCGCTCTCACG 61.894 66.667 10.32 0.00 32.06 4.35
3614 3687 2.279120 CAGCCCGATCGCTCTCAC 60.279 66.667 10.32 0.00 36.82 3.51
3615 3688 4.212913 GCAGCCCGATCGCTCTCA 62.213 66.667 10.32 0.00 36.82 3.27
3616 3689 4.959596 GGCAGCCCGATCGCTCTC 62.960 72.222 10.32 0.00 36.82 3.20
3629 3702 4.457496 AGCACCACGGATCGGCAG 62.457 66.667 0.00 0.00 0.00 4.85
3630 3703 4.758251 CAGCACCACGGATCGGCA 62.758 66.667 0.00 0.00 0.00 5.69
3632 3705 4.758251 TGCAGCACCACGGATCGG 62.758 66.667 0.00 0.00 0.00 4.18
3633 3706 3.190849 CTGCAGCACCACGGATCG 61.191 66.667 0.00 0.00 0.00 3.69
3634 3707 3.503363 GCTGCAGCACCACGGATC 61.503 66.667 33.36 0.00 41.59 3.36
3637 3710 3.687321 ATAGGCTGCAGCACCACGG 62.687 63.158 37.63 0.24 44.36 4.94
3638 3711 2.124983 ATAGGCTGCAGCACCACG 60.125 61.111 37.63 1.10 44.36 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.