Multiple sequence alignment - TraesCS2A01G409000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G409000 chr2A 100.000 2315 0 0 1 2315 666318327 666320641 0.000000e+00 4276.0
1 TraesCS2A01G409000 chr2B 93.830 1329 61 11 407 1726 614827311 614828627 0.000000e+00 1980.0
2 TraesCS2A01G409000 chr2B 93.557 357 10 4 1867 2222 614828622 614828966 9.480000e-144 520.0
3 TraesCS2A01G409000 chr2D 94.008 1185 38 17 407 1575 520743355 520742188 0.000000e+00 1764.0
4 TraesCS2A01G409000 chr2D 87.838 370 20 11 1867 2225 520741871 520741516 5.950000e-111 411.0
5 TraesCS2A01G409000 chr2D 88.571 105 9 3 1624 1726 520741969 520741866 8.680000e-25 124.0
6 TraesCS2A01G409000 chr1A 91.875 320 12 6 1 306 397086503 397086822 3.530000e-118 435.0
7 TraesCS2A01G409000 chr7B 89.711 311 25 3 1 305 662897847 662897538 7.760000e-105 390.0
8 TraesCS2A01G409000 chr7B 79.874 318 36 16 2 315 634646447 634646740 8.380000e-50 207.0
9 TraesCS2A01G409000 chr7B 85.965 114 15 1 1711 1823 498097825 498097938 1.120000e-23 121.0
10 TraesCS2A01G409000 chr3A 84.868 304 34 9 7 306 24752198 24751903 1.740000e-76 296.0
11 TraesCS2A01G409000 chr5B 84.262 305 35 11 7 306 14654743 14654447 3.760000e-73 285.0
12 TraesCS2A01G409000 chr3B 87.037 108 13 1 1717 1823 50653701 50653594 1.120000e-23 121.0
13 TraesCS2A01G409000 chr3B 85.849 106 12 3 1722 1825 88417579 88417475 2.430000e-20 110.0
14 TraesCS2A01G409000 chr5D 80.921 152 25 3 1719 1869 558913581 558913433 1.450000e-22 117.0
15 TraesCS2A01G409000 chr6B 88.889 90 10 0 1719 1808 550212677 550212766 6.760000e-21 111.0
16 TraesCS2A01G409000 chr5A 85.321 109 14 2 1717 1823 668081934 668081826 6.760000e-21 111.0
17 TraesCS2A01G409000 chr5A 84.211 114 14 4 1711 1823 683340946 683341056 8.750000e-20 108.0
18 TraesCS2A01G409000 chrUn 85.849 106 12 3 1722 1825 289552644 289552540 2.430000e-20 110.0
19 TraesCS2A01G409000 chr4A 80.000 140 21 6 1722 1856 36356412 36356549 1.890000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G409000 chr2A 666318327 666320641 2314 False 4276.000000 4276 100.0000 1 2315 1 chr2A.!!$F1 2314
1 TraesCS2A01G409000 chr2B 614827311 614828966 1655 False 1250.000000 1980 93.6935 407 2222 2 chr2B.!!$F1 1815
2 TraesCS2A01G409000 chr2D 520741516 520743355 1839 True 766.333333 1764 90.1390 407 2225 3 chr2D.!!$R1 1818

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.031111 AGAGATGGGGAACGATGGGA 60.031 55.0 0.0 0.0 0.0 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 2195 0.822121 AAAAGGACCCACGGAGCAAC 60.822 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.980699 AGGAAAGGAGGGAGGAGAAT 57.019 50.000 0.00 0.00 0.00 2.40
20 21 2.486716 AGGAAAGGAGGGAGGAGAATG 58.513 52.381 0.00 0.00 0.00 2.67
21 22 1.492599 GGAAAGGAGGGAGGAGAATGG 59.507 57.143 0.00 0.00 0.00 3.16
22 23 2.482494 GAAAGGAGGGAGGAGAATGGA 58.518 52.381 0.00 0.00 0.00 3.41
23 24 2.188818 AAGGAGGGAGGAGAATGGAG 57.811 55.000 0.00 0.00 0.00 3.86
24 25 0.267356 AGGAGGGAGGAGAATGGAGG 59.733 60.000 0.00 0.00 0.00 4.30
25 26 0.266152 GGAGGGAGGAGAATGGAGGA 59.734 60.000 0.00 0.00 0.00 3.71
26 27 1.715785 GAGGGAGGAGAATGGAGGAG 58.284 60.000 0.00 0.00 0.00 3.69
27 28 0.399806 AGGGAGGAGAATGGAGGAGC 60.400 60.000 0.00 0.00 0.00 4.70
28 29 0.399806 GGGAGGAGAATGGAGGAGCT 60.400 60.000 0.00 0.00 0.00 4.09
29 30 1.506025 GGAGGAGAATGGAGGAGCTT 58.494 55.000 0.00 0.00 0.00 3.74
30 31 1.140652 GGAGGAGAATGGAGGAGCTTG 59.859 57.143 0.00 0.00 0.00 4.01
31 32 1.140652 GAGGAGAATGGAGGAGCTTGG 59.859 57.143 0.00 0.00 0.00 3.61
32 33 0.182299 GGAGAATGGAGGAGCTTGGG 59.818 60.000 0.00 0.00 0.00 4.12
33 34 0.915364 GAGAATGGAGGAGCTTGGGT 59.085 55.000 0.00 0.00 0.00 4.51
34 35 1.283321 GAGAATGGAGGAGCTTGGGTT 59.717 52.381 0.00 0.00 0.00 4.11
35 36 1.005215 AGAATGGAGGAGCTTGGGTTG 59.995 52.381 0.00 0.00 0.00 3.77
36 37 0.040204 AATGGAGGAGCTTGGGTTGG 59.960 55.000 0.00 0.00 0.00 3.77
37 38 0.846427 ATGGAGGAGCTTGGGTTGGA 60.846 55.000 0.00 0.00 0.00 3.53
38 39 0.846427 TGGAGGAGCTTGGGTTGGAT 60.846 55.000 0.00 0.00 0.00 3.41
39 40 1.213296 GGAGGAGCTTGGGTTGGATA 58.787 55.000 0.00 0.00 0.00 2.59
40 41 1.564348 GGAGGAGCTTGGGTTGGATAA 59.436 52.381 0.00 0.00 0.00 1.75
41 42 2.422093 GGAGGAGCTTGGGTTGGATAAG 60.422 54.545 0.00 0.00 0.00 1.73
42 43 2.505819 GAGGAGCTTGGGTTGGATAAGA 59.494 50.000 0.00 0.00 0.00 2.10
43 44 2.507471 AGGAGCTTGGGTTGGATAAGAG 59.493 50.000 0.00 0.00 0.00 2.85
44 45 2.422093 GGAGCTTGGGTTGGATAAGAGG 60.422 54.545 0.00 0.00 0.00 3.69
45 46 1.566231 AGCTTGGGTTGGATAAGAGGG 59.434 52.381 0.00 0.00 0.00 4.30
46 47 1.285078 GCTTGGGTTGGATAAGAGGGT 59.715 52.381 0.00 0.00 0.00 4.34
47 48 2.291605 GCTTGGGTTGGATAAGAGGGTT 60.292 50.000 0.00 0.00 0.00 4.11
48 49 3.053917 GCTTGGGTTGGATAAGAGGGTTA 60.054 47.826 0.00 0.00 0.00 2.85
49 50 4.386424 GCTTGGGTTGGATAAGAGGGTTAT 60.386 45.833 0.00 0.00 0.00 1.89
50 51 5.163131 GCTTGGGTTGGATAAGAGGGTTATA 60.163 44.000 0.00 0.00 0.00 0.98
51 52 6.509523 TTGGGTTGGATAAGAGGGTTATAG 57.490 41.667 0.00 0.00 0.00 1.31
52 53 5.544682 TGGGTTGGATAAGAGGGTTATAGT 58.455 41.667 0.00 0.00 0.00 2.12
53 54 5.368523 TGGGTTGGATAAGAGGGTTATAGTG 59.631 44.000 0.00 0.00 0.00 2.74
54 55 5.221864 GGGTTGGATAAGAGGGTTATAGTGG 60.222 48.000 0.00 0.00 0.00 4.00
55 56 5.605488 GGTTGGATAAGAGGGTTATAGTGGA 59.395 44.000 0.00 0.00 0.00 4.02
56 57 6.100714 GGTTGGATAAGAGGGTTATAGTGGAA 59.899 42.308 0.00 0.00 0.00 3.53
57 58 6.996180 TGGATAAGAGGGTTATAGTGGAAG 57.004 41.667 0.00 0.00 0.00 3.46
58 59 5.844516 TGGATAAGAGGGTTATAGTGGAAGG 59.155 44.000 0.00 0.00 0.00 3.46
59 60 5.248705 GGATAAGAGGGTTATAGTGGAAGGG 59.751 48.000 0.00 0.00 0.00 3.95
60 61 3.061909 AGAGGGTTATAGTGGAAGGGG 57.938 52.381 0.00 0.00 0.00 4.79
61 62 2.595380 AGAGGGTTATAGTGGAAGGGGA 59.405 50.000 0.00 0.00 0.00 4.81
62 63 2.973406 GAGGGTTATAGTGGAAGGGGAG 59.027 54.545 0.00 0.00 0.00 4.30
63 64 1.420514 GGGTTATAGTGGAAGGGGAGC 59.579 57.143 0.00 0.00 0.00 4.70
64 65 2.409570 GGTTATAGTGGAAGGGGAGCT 58.590 52.381 0.00 0.00 0.00 4.09
65 66 2.369203 GGTTATAGTGGAAGGGGAGCTC 59.631 54.545 4.71 4.71 0.00 4.09
66 67 1.996798 TATAGTGGAAGGGGAGCTCG 58.003 55.000 7.83 0.00 0.00 5.03
67 68 0.032017 ATAGTGGAAGGGGAGCTCGT 60.032 55.000 7.83 0.00 0.00 4.18
68 69 0.683504 TAGTGGAAGGGGAGCTCGTC 60.684 60.000 7.83 2.20 0.00 4.20
69 70 2.119611 TGGAAGGGGAGCTCGTCA 59.880 61.111 7.83 0.00 0.00 4.35
70 71 1.984570 TGGAAGGGGAGCTCGTCAG 60.985 63.158 7.83 0.00 0.00 3.51
71 72 1.682684 GGAAGGGGAGCTCGTCAGA 60.683 63.158 7.83 0.00 0.00 3.27
82 83 1.289066 TCGTCAGAGAACCAAGCCG 59.711 57.895 0.00 0.00 0.00 5.52
83 84 1.738099 CGTCAGAGAACCAAGCCGG 60.738 63.158 0.00 0.00 42.50 6.13
84 85 2.035442 GTCAGAGAACCAAGCCGGC 61.035 63.158 21.89 21.89 39.03 6.13
85 86 2.032528 CAGAGAACCAAGCCGGCA 59.967 61.111 31.54 0.00 39.03 5.69
86 87 2.037136 CAGAGAACCAAGCCGGCAG 61.037 63.158 31.54 20.72 39.03 4.85
87 88 2.217038 AGAGAACCAAGCCGGCAGA 61.217 57.895 31.54 0.00 39.03 4.26
88 89 1.078143 GAGAACCAAGCCGGCAGAT 60.078 57.895 31.54 11.91 39.03 2.90
89 90 1.078143 AGAACCAAGCCGGCAGATC 60.078 57.895 31.54 19.90 39.03 2.75
90 91 2.436646 AACCAAGCCGGCAGATCG 60.437 61.111 31.54 13.27 39.03 3.69
91 92 2.852495 GAACCAAGCCGGCAGATCGA 62.852 60.000 31.54 0.00 39.03 3.59
92 93 2.125147 CCAAGCCGGCAGATCGAA 60.125 61.111 31.54 0.00 0.00 3.71
93 94 2.176273 CCAAGCCGGCAGATCGAAG 61.176 63.158 31.54 8.29 0.00 3.79
94 95 2.176273 CAAGCCGGCAGATCGAAGG 61.176 63.158 31.54 2.46 0.00 3.46
95 96 2.359169 AAGCCGGCAGATCGAAGGA 61.359 57.895 31.54 0.00 0.00 3.36
96 97 1.899437 AAGCCGGCAGATCGAAGGAA 61.899 55.000 31.54 0.00 0.00 3.36
97 98 1.449601 GCCGGCAGATCGAAGGAAA 60.450 57.895 24.80 0.00 0.00 3.13
98 99 1.432270 GCCGGCAGATCGAAGGAAAG 61.432 60.000 24.80 0.00 0.00 2.62
99 100 0.811616 CCGGCAGATCGAAGGAAAGG 60.812 60.000 0.00 0.00 0.00 3.11
100 101 0.108138 CGGCAGATCGAAGGAAAGGT 60.108 55.000 0.00 0.00 0.00 3.50
101 102 1.373570 GGCAGATCGAAGGAAAGGTG 58.626 55.000 0.00 0.00 0.00 4.00
102 103 0.729690 GCAGATCGAAGGAAAGGTGC 59.270 55.000 0.00 0.00 0.00 5.01
103 104 1.373570 CAGATCGAAGGAAAGGTGCC 58.626 55.000 0.00 0.00 0.00 5.01
104 105 0.253327 AGATCGAAGGAAAGGTGCCC 59.747 55.000 0.00 0.00 0.00 5.36
105 106 0.748367 GATCGAAGGAAAGGTGCCCC 60.748 60.000 0.00 0.00 0.00 5.80
106 107 2.211468 ATCGAAGGAAAGGTGCCCCC 62.211 60.000 0.00 0.00 0.00 5.40
107 108 2.851045 GAAGGAAAGGTGCCCCCA 59.149 61.111 0.00 0.00 34.66 4.96
108 109 1.388133 GAAGGAAAGGTGCCCCCAT 59.612 57.895 0.00 0.00 34.66 4.00
109 110 0.684479 GAAGGAAAGGTGCCCCCATC 60.684 60.000 0.00 0.00 34.66 3.51
110 111 1.442886 AAGGAAAGGTGCCCCCATCA 61.443 55.000 0.00 0.00 34.66 3.07
111 112 1.078347 GGAAAGGTGCCCCCATCAA 59.922 57.895 0.00 0.00 34.66 2.57
112 113 0.325577 GGAAAGGTGCCCCCATCAAT 60.326 55.000 0.00 0.00 34.66 2.57
113 114 0.826062 GAAAGGTGCCCCCATCAATG 59.174 55.000 0.00 0.00 34.66 2.82
115 116 3.156556 GGTGCCCCCATCAATGGC 61.157 66.667 3.33 0.00 46.70 4.40
116 117 2.042639 GTGCCCCCATCAATGGCT 60.043 61.111 3.33 0.00 46.70 4.75
117 118 1.686800 GTGCCCCCATCAATGGCTT 60.687 57.895 3.33 0.00 46.70 4.35
118 119 1.686455 TGCCCCCATCAATGGCTTG 60.686 57.895 3.33 0.00 46.70 4.01
119 120 1.381599 GCCCCCATCAATGGCTTGA 60.382 57.895 3.33 2.63 46.70 3.02
120 121 1.397390 GCCCCCATCAATGGCTTGAG 61.397 60.000 3.33 0.00 46.70 3.02
121 122 0.259647 CCCCCATCAATGGCTTGAGA 59.740 55.000 3.33 0.00 46.70 3.27
122 123 1.688772 CCCCATCAATGGCTTGAGAG 58.311 55.000 3.33 2.14 46.70 3.20
123 124 1.213678 CCCCATCAATGGCTTGAGAGA 59.786 52.381 3.33 0.00 46.70 3.10
124 125 2.573369 CCCATCAATGGCTTGAGAGAG 58.427 52.381 3.33 0.00 46.70 3.20
125 126 2.172082 CCCATCAATGGCTTGAGAGAGA 59.828 50.000 3.33 0.00 46.70 3.10
126 127 3.181442 CCCATCAATGGCTTGAGAGAGAT 60.181 47.826 3.33 0.00 46.70 2.75
127 128 3.815962 CCATCAATGGCTTGAGAGAGATG 59.184 47.826 0.00 0.00 44.32 2.90
128 129 3.555527 TCAATGGCTTGAGAGAGATGG 57.444 47.619 0.00 0.00 36.46 3.51
129 130 2.172082 TCAATGGCTTGAGAGAGATGGG 59.828 50.000 0.00 0.00 36.46 4.00
130 131 1.138568 ATGGCTTGAGAGAGATGGGG 58.861 55.000 0.00 0.00 0.00 4.96
131 132 0.043183 TGGCTTGAGAGAGATGGGGA 59.957 55.000 0.00 0.00 0.00 4.81
132 133 1.207791 GGCTTGAGAGAGATGGGGAA 58.792 55.000 0.00 0.00 0.00 3.97
133 134 1.134250 GGCTTGAGAGAGATGGGGAAC 60.134 57.143 0.00 0.00 0.00 3.62
134 135 1.472376 GCTTGAGAGAGATGGGGAACG 60.472 57.143 0.00 0.00 0.00 3.95
135 136 2.103373 CTTGAGAGAGATGGGGAACGA 58.897 52.381 0.00 0.00 0.00 3.85
136 137 2.461300 TGAGAGAGATGGGGAACGAT 57.539 50.000 0.00 0.00 0.00 3.73
137 138 2.034878 TGAGAGAGATGGGGAACGATG 58.965 52.381 0.00 0.00 0.00 3.84
138 139 1.342819 GAGAGAGATGGGGAACGATGG 59.657 57.143 0.00 0.00 0.00 3.51
139 140 0.394565 GAGAGATGGGGAACGATGGG 59.605 60.000 0.00 0.00 0.00 4.00
140 141 0.031111 AGAGATGGGGAACGATGGGA 60.031 55.000 0.00 0.00 0.00 4.37
141 142 0.394565 GAGATGGGGAACGATGGGAG 59.605 60.000 0.00 0.00 0.00 4.30
142 143 0.031111 AGATGGGGAACGATGGGAGA 60.031 55.000 0.00 0.00 0.00 3.71
143 144 0.394565 GATGGGGAACGATGGGAGAG 59.605 60.000 0.00 0.00 0.00 3.20
144 145 0.031111 ATGGGGAACGATGGGAGAGA 60.031 55.000 0.00 0.00 0.00 3.10
145 146 0.687757 TGGGGAACGATGGGAGAGAG 60.688 60.000 0.00 0.00 0.00 3.20
146 147 1.403687 GGGGAACGATGGGAGAGAGG 61.404 65.000 0.00 0.00 0.00 3.69
147 148 0.397254 GGGAACGATGGGAGAGAGGA 60.397 60.000 0.00 0.00 0.00 3.71
148 149 1.486211 GGAACGATGGGAGAGAGGAA 58.514 55.000 0.00 0.00 0.00 3.36
149 150 1.831736 GGAACGATGGGAGAGAGGAAA 59.168 52.381 0.00 0.00 0.00 3.13
150 151 2.236395 GGAACGATGGGAGAGAGGAAAA 59.764 50.000 0.00 0.00 0.00 2.29
151 152 3.526534 GAACGATGGGAGAGAGGAAAAG 58.473 50.000 0.00 0.00 0.00 2.27
152 153 2.821437 ACGATGGGAGAGAGGAAAAGA 58.179 47.619 0.00 0.00 0.00 2.52
153 154 3.173965 ACGATGGGAGAGAGGAAAAGAA 58.826 45.455 0.00 0.00 0.00 2.52
154 155 3.583086 ACGATGGGAGAGAGGAAAAGAAA 59.417 43.478 0.00 0.00 0.00 2.52
155 156 4.041691 ACGATGGGAGAGAGGAAAAGAAAA 59.958 41.667 0.00 0.00 0.00 2.29
156 157 5.003804 CGATGGGAGAGAGGAAAAGAAAAA 58.996 41.667 0.00 0.00 0.00 1.94
176 177 3.558608 AAAAACCATGATGGGAAGGGA 57.441 42.857 17.04 0.00 43.37 4.20
177 178 3.782413 AAAACCATGATGGGAAGGGAT 57.218 42.857 17.04 0.00 43.37 3.85
178 179 4.898014 AAAACCATGATGGGAAGGGATA 57.102 40.909 17.04 0.00 43.37 2.59
179 180 4.898014 AAACCATGATGGGAAGGGATAA 57.102 40.909 17.04 0.00 43.37 1.75
180 181 4.459852 AACCATGATGGGAAGGGATAAG 57.540 45.455 17.04 0.00 43.37 1.73
181 182 3.680169 ACCATGATGGGAAGGGATAAGA 58.320 45.455 17.04 0.00 43.37 2.10
182 183 3.654806 ACCATGATGGGAAGGGATAAGAG 59.345 47.826 17.04 0.00 43.37 2.85
183 184 3.560882 CCATGATGGGAAGGGATAAGAGC 60.561 52.174 2.79 0.00 32.67 4.09
184 185 1.694150 TGATGGGAAGGGATAAGAGCG 59.306 52.381 0.00 0.00 0.00 5.03
185 186 1.971357 GATGGGAAGGGATAAGAGCGA 59.029 52.381 0.00 0.00 0.00 4.93
186 187 1.874129 TGGGAAGGGATAAGAGCGAA 58.126 50.000 0.00 0.00 0.00 4.70
187 188 1.762957 TGGGAAGGGATAAGAGCGAAG 59.237 52.381 0.00 0.00 0.00 3.79
201 202 3.635433 CGAAGCGGATAAGAACGGA 57.365 52.632 0.00 0.00 0.00 4.69
202 203 1.917273 CGAAGCGGATAAGAACGGAA 58.083 50.000 0.00 0.00 0.00 4.30
203 204 1.852895 CGAAGCGGATAAGAACGGAAG 59.147 52.381 0.00 0.00 0.00 3.46
204 205 1.593469 GAAGCGGATAAGAACGGAAGC 59.407 52.381 0.00 0.00 0.00 3.86
205 206 0.179081 AGCGGATAAGAACGGAAGCC 60.179 55.000 0.00 0.00 0.00 4.35
206 207 0.461339 GCGGATAAGAACGGAAGCCA 60.461 55.000 0.00 0.00 0.00 4.75
207 208 1.571919 CGGATAAGAACGGAAGCCAG 58.428 55.000 0.00 0.00 0.00 4.85
208 209 1.136305 CGGATAAGAACGGAAGCCAGA 59.864 52.381 0.00 0.00 0.00 3.86
209 210 2.799917 CGGATAAGAACGGAAGCCAGAG 60.800 54.545 0.00 0.00 0.00 3.35
210 211 2.431057 GGATAAGAACGGAAGCCAGAGA 59.569 50.000 0.00 0.00 0.00 3.10
211 212 3.491792 GGATAAGAACGGAAGCCAGAGAG 60.492 52.174 0.00 0.00 0.00 3.20
212 213 1.343069 AAGAACGGAAGCCAGAGAGT 58.657 50.000 0.00 0.00 0.00 3.24
213 214 2.217510 AGAACGGAAGCCAGAGAGTA 57.782 50.000 0.00 0.00 0.00 2.59
214 215 2.096248 AGAACGGAAGCCAGAGAGTAG 58.904 52.381 0.00 0.00 0.00 2.57
215 216 1.819903 GAACGGAAGCCAGAGAGTAGT 59.180 52.381 0.00 0.00 0.00 2.73
216 217 1.178276 ACGGAAGCCAGAGAGTAGTG 58.822 55.000 0.00 0.00 0.00 2.74
217 218 0.179124 CGGAAGCCAGAGAGTAGTGC 60.179 60.000 0.00 0.00 0.00 4.40
218 219 0.179124 GGAAGCCAGAGAGTAGTGCG 60.179 60.000 0.00 0.00 0.00 5.34
219 220 0.528470 GAAGCCAGAGAGTAGTGCGT 59.472 55.000 0.00 0.00 0.00 5.24
220 221 0.244994 AAGCCAGAGAGTAGTGCGTG 59.755 55.000 0.00 0.00 0.00 5.34
221 222 1.153745 GCCAGAGAGTAGTGCGTGG 60.154 63.158 0.00 0.00 0.00 4.94
222 223 1.878656 GCCAGAGAGTAGTGCGTGGT 61.879 60.000 0.00 0.00 0.00 4.16
223 224 1.460504 CCAGAGAGTAGTGCGTGGTA 58.539 55.000 0.00 0.00 0.00 3.25
224 225 1.132643 CCAGAGAGTAGTGCGTGGTAC 59.867 57.143 0.00 0.00 0.00 3.34
225 226 1.810755 CAGAGAGTAGTGCGTGGTACA 59.189 52.381 0.00 0.00 0.00 2.90
226 227 2.423892 CAGAGAGTAGTGCGTGGTACAT 59.576 50.000 0.00 0.00 44.52 2.29
227 228 3.090037 AGAGAGTAGTGCGTGGTACATT 58.910 45.455 0.00 0.00 44.52 2.71
228 229 3.510360 AGAGAGTAGTGCGTGGTACATTT 59.490 43.478 0.00 0.00 44.52 2.32
229 230 3.585862 AGAGTAGTGCGTGGTACATTTG 58.414 45.455 0.00 0.00 44.52 2.32
230 231 3.006537 AGAGTAGTGCGTGGTACATTTGT 59.993 43.478 0.00 0.00 44.52 2.83
231 232 4.219070 AGAGTAGTGCGTGGTACATTTGTA 59.781 41.667 0.00 0.00 44.52 2.41
243 244 3.517296 ACATTTGTACATGGGTCCACA 57.483 42.857 0.00 0.00 0.00 4.17
244 245 3.153919 ACATTTGTACATGGGTCCACAC 58.846 45.455 0.00 0.00 0.00 3.82
245 246 3.153130 CATTTGTACATGGGTCCACACA 58.847 45.455 0.00 0.00 0.00 3.72
246 247 2.559698 TTGTACATGGGTCCACACAG 57.440 50.000 0.00 0.00 29.81 3.66
247 248 1.723288 TGTACATGGGTCCACACAGA 58.277 50.000 0.00 0.00 29.81 3.41
248 249 1.346395 TGTACATGGGTCCACACAGAC 59.654 52.381 0.00 0.00 35.95 3.51
249 250 0.606096 TACATGGGTCCACACAGACG 59.394 55.000 0.00 0.00 37.66 4.18
250 251 2.034879 CATGGGTCCACACAGACGC 61.035 63.158 2.14 2.14 46.75 5.19
275 276 3.292159 GCGACCGGCCCAAAAGTT 61.292 61.111 0.00 0.00 34.80 2.66
276 277 1.967494 GCGACCGGCCCAAAAGTTA 60.967 57.895 0.00 0.00 34.80 2.24
277 278 1.918868 GCGACCGGCCCAAAAGTTAG 61.919 60.000 0.00 0.00 34.80 2.34
278 279 1.880894 GACCGGCCCAAAAGTTAGC 59.119 57.895 0.00 0.00 0.00 3.09
279 280 1.592400 GACCGGCCCAAAAGTTAGCC 61.592 60.000 0.00 0.00 42.18 3.93
281 282 3.284336 GGCCCAAAAGTTAGCCGG 58.716 61.111 0.00 0.00 35.30 6.13
282 283 1.605451 GGCCCAAAAGTTAGCCGGT 60.605 57.895 1.90 0.00 35.30 5.28
283 284 1.592400 GGCCCAAAAGTTAGCCGGTC 61.592 60.000 1.90 0.00 35.30 4.79
284 285 1.918868 GCCCAAAAGTTAGCCGGTCG 61.919 60.000 1.90 0.00 0.00 4.79
285 286 0.604511 CCCAAAAGTTAGCCGGTCGT 60.605 55.000 1.90 0.00 0.00 4.34
286 287 0.794473 CCAAAAGTTAGCCGGTCGTC 59.206 55.000 1.90 0.00 0.00 4.20
287 288 0.794473 CAAAAGTTAGCCGGTCGTCC 59.206 55.000 1.90 0.00 0.00 4.79
297 298 3.866356 GGTCGTCCGGCTGTAAAC 58.134 61.111 0.00 0.00 0.00 2.01
298 299 2.090524 GGTCGTCCGGCTGTAAACG 61.091 63.158 0.00 0.00 36.50 3.60
299 300 1.372128 GTCGTCCGGCTGTAAACGT 60.372 57.895 10.44 0.00 36.55 3.99
300 301 0.940991 GTCGTCCGGCTGTAAACGTT 60.941 55.000 10.44 0.00 36.55 3.99
301 302 0.249405 TCGTCCGGCTGTAAACGTTT 60.249 50.000 18.90 18.90 36.55 3.60
302 303 1.000827 TCGTCCGGCTGTAAACGTTTA 60.001 47.619 16.59 16.59 36.55 2.01
303 304 1.124839 CGTCCGGCTGTAAACGTTTAC 59.875 52.381 33.94 33.94 42.51 2.01
304 305 1.460743 GTCCGGCTGTAAACGTTTACC 59.539 52.381 35.87 25.52 41.72 2.85
305 306 1.069823 TCCGGCTGTAAACGTTTACCA 59.930 47.619 35.87 25.79 41.72 3.25
306 307 1.872313 CCGGCTGTAAACGTTTACCAA 59.128 47.619 35.87 23.37 41.72 3.67
307 308 2.096119 CCGGCTGTAAACGTTTACCAAG 60.096 50.000 35.87 29.62 41.72 3.61
308 309 2.545106 CGGCTGTAAACGTTTACCAAGT 59.455 45.455 35.87 9.82 41.72 3.16
309 310 3.002553 CGGCTGTAAACGTTTACCAAGTT 59.997 43.478 35.87 9.12 41.72 2.66
310 311 4.284485 GGCTGTAAACGTTTACCAAGTTG 58.716 43.478 35.87 23.03 41.72 3.16
311 312 4.035441 GGCTGTAAACGTTTACCAAGTTGA 59.965 41.667 35.87 21.07 41.72 3.18
312 313 5.448904 GGCTGTAAACGTTTACCAAGTTGAA 60.449 40.000 35.87 20.49 41.72 2.69
313 314 6.203647 GCTGTAAACGTTTACCAAGTTGAAT 58.796 36.000 35.87 7.07 41.72 2.57
314 315 6.693978 GCTGTAAACGTTTACCAAGTTGAATT 59.306 34.615 35.87 6.65 41.72 2.17
315 316 7.096763 GCTGTAAACGTTTACCAAGTTGAATTC 60.097 37.037 35.87 16.50 41.72 2.17
316 317 7.194962 TGTAAACGTTTACCAAGTTGAATTCC 58.805 34.615 35.87 15.55 41.72 3.01
317 318 6.459670 AAACGTTTACCAAGTTGAATTCCT 57.540 33.333 12.83 0.00 0.00 3.36
318 319 5.432885 ACGTTTACCAAGTTGAATTCCTG 57.567 39.130 3.87 0.00 0.00 3.86
319 320 4.277423 ACGTTTACCAAGTTGAATTCCTGG 59.723 41.667 3.87 7.14 0.00 4.45
320 321 4.517453 CGTTTACCAAGTTGAATTCCTGGA 59.483 41.667 15.86 0.00 0.00 3.86
321 322 5.183140 CGTTTACCAAGTTGAATTCCTGGAT 59.817 40.000 15.86 6.63 0.00 3.41
322 323 6.621613 GTTTACCAAGTTGAATTCCTGGATC 58.378 40.000 15.86 0.00 0.00 3.36
323 324 3.701664 ACCAAGTTGAATTCCTGGATCC 58.298 45.455 4.20 4.20 0.00 3.36
324 325 2.684881 CCAAGTTGAATTCCTGGATCCG 59.315 50.000 7.39 1.76 0.00 4.18
325 326 2.044123 AGTTGAATTCCTGGATCCGC 57.956 50.000 7.39 0.00 0.00 5.54
326 327 1.561542 AGTTGAATTCCTGGATCCGCT 59.438 47.619 7.39 0.00 0.00 5.52
327 328 2.771943 AGTTGAATTCCTGGATCCGCTA 59.228 45.455 7.39 0.00 0.00 4.26
328 329 3.134458 GTTGAATTCCTGGATCCGCTAG 58.866 50.000 7.39 0.00 0.00 3.42
329 330 2.398588 TGAATTCCTGGATCCGCTAGT 58.601 47.619 7.39 0.00 0.00 2.57
330 331 2.771943 TGAATTCCTGGATCCGCTAGTT 59.228 45.455 7.39 0.00 0.00 2.24
331 332 2.918712 ATTCCTGGATCCGCTAGTTG 57.081 50.000 7.39 0.00 0.00 3.16
332 333 1.860641 TTCCTGGATCCGCTAGTTGA 58.139 50.000 7.39 0.00 0.00 3.18
333 334 2.088104 TCCTGGATCCGCTAGTTGAT 57.912 50.000 7.39 0.00 0.00 2.57
334 335 1.688735 TCCTGGATCCGCTAGTTGATG 59.311 52.381 7.39 0.00 0.00 3.07
335 336 1.414181 CCTGGATCCGCTAGTTGATGT 59.586 52.381 7.39 0.00 0.00 3.06
336 337 2.477825 CTGGATCCGCTAGTTGATGTG 58.522 52.381 7.39 0.00 0.00 3.21
337 338 1.221414 GGATCCGCTAGTTGATGTGC 58.779 55.000 0.00 0.00 0.00 4.57
338 339 1.473257 GGATCCGCTAGTTGATGTGCA 60.473 52.381 0.00 0.00 0.00 4.57
339 340 1.594862 GATCCGCTAGTTGATGTGCAC 59.405 52.381 10.75 10.75 0.00 4.57
340 341 0.320050 TCCGCTAGTTGATGTGCACA 59.680 50.000 24.08 24.08 0.00 4.57
341 342 1.155889 CCGCTAGTTGATGTGCACAA 58.844 50.000 25.72 5.14 0.00 3.33
342 343 1.129251 CCGCTAGTTGATGTGCACAAG 59.871 52.381 25.72 16.36 0.00 3.16
343 344 2.068519 CGCTAGTTGATGTGCACAAGA 58.931 47.619 25.72 10.54 0.00 3.02
344 345 2.674852 CGCTAGTTGATGTGCACAAGAT 59.325 45.455 25.72 7.52 0.00 2.40
345 346 3.125829 CGCTAGTTGATGTGCACAAGATT 59.874 43.478 25.72 7.07 0.00 2.40
346 347 4.329801 CGCTAGTTGATGTGCACAAGATTA 59.670 41.667 25.72 12.12 0.00 1.75
347 348 5.163864 CGCTAGTTGATGTGCACAAGATTAA 60.164 40.000 25.72 7.87 0.00 1.40
348 349 6.253746 GCTAGTTGATGTGCACAAGATTAAG 58.746 40.000 25.72 17.58 0.00 1.85
349 350 6.128172 GCTAGTTGATGTGCACAAGATTAAGT 60.128 38.462 25.72 15.15 0.00 2.24
350 351 7.064609 GCTAGTTGATGTGCACAAGATTAAGTA 59.935 37.037 25.72 15.45 0.00 2.24
351 352 7.744087 AGTTGATGTGCACAAGATTAAGTAA 57.256 32.000 25.72 5.88 0.00 2.24
352 353 8.340618 AGTTGATGTGCACAAGATTAAGTAAT 57.659 30.769 25.72 1.57 0.00 1.89
353 354 8.239314 AGTTGATGTGCACAAGATTAAGTAATG 58.761 33.333 25.72 0.00 0.00 1.90
354 355 7.920160 TGATGTGCACAAGATTAAGTAATGA 57.080 32.000 25.72 0.00 0.00 2.57
355 356 8.510243 TGATGTGCACAAGATTAAGTAATGAT 57.490 30.769 25.72 0.03 0.00 2.45
356 357 8.959548 TGATGTGCACAAGATTAAGTAATGATT 58.040 29.630 25.72 0.00 0.00 2.57
357 358 9.793252 GATGTGCACAAGATTAAGTAATGATTT 57.207 29.630 25.72 0.00 0.00 2.17
359 360 9.409312 TGTGCACAAGATTAAGTAATGATTTTG 57.591 29.630 19.28 0.00 0.00 2.44
360 361 8.375465 GTGCACAAGATTAAGTAATGATTTTGC 58.625 33.333 13.17 8.45 31.76 3.68
361 362 8.087136 TGCACAAGATTAAGTAATGATTTTGCA 58.913 29.630 11.62 11.62 35.08 4.08
362 363 8.589629 GCACAAGATTAAGTAATGATTTTGCAG 58.410 33.333 9.62 0.00 31.61 4.41
363 364 8.589629 CACAAGATTAAGTAATGATTTTGCAGC 58.410 33.333 0.00 0.00 0.00 5.25
364 365 7.761249 ACAAGATTAAGTAATGATTTTGCAGCC 59.239 33.333 0.00 0.00 0.00 4.85
365 366 7.651027 AGATTAAGTAATGATTTTGCAGCCT 57.349 32.000 0.00 0.00 0.00 4.58
366 367 7.486647 AGATTAAGTAATGATTTTGCAGCCTG 58.513 34.615 0.00 0.00 0.00 4.85
367 368 6.588719 TTAAGTAATGATTTTGCAGCCTGT 57.411 33.333 0.00 0.00 0.00 4.00
368 369 5.473066 AAGTAATGATTTTGCAGCCTGTT 57.527 34.783 0.00 0.00 0.00 3.16
369 370 5.473066 AGTAATGATTTTGCAGCCTGTTT 57.527 34.783 0.00 0.00 0.00 2.83
370 371 5.232463 AGTAATGATTTTGCAGCCTGTTTG 58.768 37.500 0.00 0.00 0.00 2.93
371 372 1.868469 TGATTTTGCAGCCTGTTTGC 58.132 45.000 0.00 0.00 41.86 3.68
376 377 2.418356 GCAGCCTGTTTGCAAGCA 59.582 55.556 15.57 15.57 41.17 3.91
377 378 1.227321 GCAGCCTGTTTGCAAGCAA 60.227 52.632 17.06 2.89 41.17 3.91
378 379 1.493134 GCAGCCTGTTTGCAAGCAAC 61.493 55.000 17.06 11.88 41.17 4.17
379 380 0.103572 CAGCCTGTTTGCAAGCAACT 59.896 50.000 17.06 13.85 34.63 3.16
380 381 0.826062 AGCCTGTTTGCAAGCAACTT 59.174 45.000 17.06 2.71 34.63 2.66
381 382 1.207811 AGCCTGTTTGCAAGCAACTTT 59.792 42.857 17.06 1.00 34.63 2.66
382 383 1.328374 GCCTGTTTGCAAGCAACTTTG 59.672 47.619 17.06 5.09 35.46 2.77
383 384 2.620242 CCTGTTTGCAAGCAACTTTGT 58.380 42.857 17.06 0.00 35.46 2.83
384 385 3.779759 CCTGTTTGCAAGCAACTTTGTA 58.220 40.909 17.06 0.00 35.46 2.41
385 386 4.180057 CCTGTTTGCAAGCAACTTTGTAA 58.820 39.130 17.06 0.00 35.46 2.41
386 387 4.032786 CCTGTTTGCAAGCAACTTTGTAAC 59.967 41.667 17.06 2.02 33.38 2.50
387 388 3.610242 TGTTTGCAAGCAACTTTGTAACG 59.390 39.130 14.06 0.00 33.38 3.18
388 389 3.766676 TTGCAAGCAACTTTGTAACGA 57.233 38.095 2.89 0.00 29.53 3.85
389 390 3.980646 TGCAAGCAACTTTGTAACGAT 57.019 38.095 0.00 0.00 0.00 3.73
390 391 3.884169 TGCAAGCAACTTTGTAACGATC 58.116 40.909 0.00 0.00 0.00 3.69
391 392 3.563808 TGCAAGCAACTTTGTAACGATCT 59.436 39.130 0.00 0.00 0.00 2.75
392 393 4.036262 TGCAAGCAACTTTGTAACGATCTT 59.964 37.500 0.00 0.00 0.00 2.40
393 394 4.976116 GCAAGCAACTTTGTAACGATCTTT 59.024 37.500 0.00 0.00 0.00 2.52
394 395 5.458779 GCAAGCAACTTTGTAACGATCTTTT 59.541 36.000 0.00 0.00 0.00 2.27
395 396 6.019881 GCAAGCAACTTTGTAACGATCTTTTT 60.020 34.615 0.00 0.00 0.00 1.94
424 425 5.261216 GGGGGAACTTTGTAATGATCTTGA 58.739 41.667 0.00 0.00 0.00 3.02
448 449 2.814805 ACTTGCTCCACCTATTGCAT 57.185 45.000 0.00 0.00 35.27 3.96
455 456 3.065925 GCTCCACCTATTGCATCTCAAAC 59.934 47.826 0.00 0.00 38.34 2.93
462 463 4.098960 CCTATTGCATCTCAAACCTTGCAT 59.901 41.667 0.00 0.00 43.91 3.96
494 495 2.713877 ACCATTTGCCAATTGCCATTC 58.286 42.857 0.00 0.00 40.16 2.67
524 527 3.487544 GCTCCATCTGTCGCCAAATTTAC 60.488 47.826 0.00 0.00 0.00 2.01
573 576 0.036010 AAGTCGGCTAGCAGTGCAAT 60.036 50.000 19.20 0.00 0.00 3.56
614 617 1.067706 CCAGAAAATGCATCACGCCAA 60.068 47.619 0.00 0.00 41.33 4.52
627 630 5.694816 CATCACGCCAAGTAACACATTAAA 58.305 37.500 0.00 0.00 0.00 1.52
648 651 2.358322 TCCAAACAGAAACTCACCCC 57.642 50.000 0.00 0.00 0.00 4.95
754 758 1.421410 CTGGCACTACGACGGAATGC 61.421 60.000 4.59 4.59 35.51 3.56
767 771 0.599728 GGAATGCGCCAAACTGCAAA 60.600 50.000 4.18 0.00 45.45 3.68
776 780 0.593773 CAAACTGCAAACCGAACGGG 60.594 55.000 17.44 1.21 43.62 5.28
784 793 1.698067 AAACCGAACGGGAGGGAACA 61.698 55.000 17.44 0.00 39.97 3.18
791 800 3.319198 GGGAGGGAACACGCCTCA 61.319 66.667 8.10 0.00 32.77 3.86
1242 1264 1.803519 CTTCGACGACAGCAGCCTC 60.804 63.158 0.00 0.00 0.00 4.70
1318 1346 4.889112 CCAGGCGGGCATGAGCAT 62.889 66.667 6.92 0.00 44.61 3.79
1319 1347 3.592814 CAGGCGGGCATGAGCATG 61.593 66.667 3.78 6.11 44.61 4.06
1320 1348 3.800833 AGGCGGGCATGAGCATGA 61.801 61.111 14.27 0.00 44.61 3.07
1377 1405 1.713078 AGGATCCCTTTTGCCACTTCT 59.287 47.619 8.55 0.00 0.00 2.85
1378 1406 2.095461 GGATCCCTTTTGCCACTTCTC 58.905 52.381 0.00 0.00 0.00 2.87
1469 1497 2.595124 TGTACTACATGTCATGCGGG 57.405 50.000 12.91 5.84 0.00 6.13
1520 1549 4.157105 GCGGGTGTAAATATTCTTGTGGTT 59.843 41.667 0.00 0.00 0.00 3.67
1528 1557 8.293867 TGTAAATATTCTTGTGGTTTTCTTCCG 58.706 33.333 0.00 0.00 0.00 4.30
1597 1626 2.031682 GTCAGTGCATGTCTGTTTGGTC 60.032 50.000 15.69 3.26 34.86 4.02
1604 1633 3.126514 GCATGTCTGTTTGGTCATCAGAG 59.873 47.826 0.00 0.00 38.60 3.35
1660 1880 2.991190 GCTCCAAATGTGCATCAAGTTG 59.009 45.455 0.00 0.00 33.65 3.16
1692 1912 6.299805 TCATGTGGTACTTATCTCAGCTTT 57.700 37.500 0.00 0.00 0.00 3.51
1693 1913 7.418337 TCATGTGGTACTTATCTCAGCTTTA 57.582 36.000 0.00 0.00 0.00 1.85
1708 1929 6.095021 TCTCAGCTTTAGACTTAATCGTAGCA 59.905 38.462 0.00 0.00 34.35 3.49
1721 1942 9.379791 ACTTAATCGTAGCAGTTTAAGCTAAAT 57.620 29.630 12.93 0.00 45.30 1.40
1724 1945 8.943909 AATCGTAGCAGTTTAAGCTAAATACT 57.056 30.769 0.00 0.00 45.30 2.12
1725 1946 7.982371 TCGTAGCAGTTTAAGCTAAATACTC 57.018 36.000 0.00 0.00 45.30 2.59
1726 1947 6.976925 TCGTAGCAGTTTAAGCTAAATACTCC 59.023 38.462 0.00 0.00 45.30 3.85
1727 1948 6.200475 CGTAGCAGTTTAAGCTAAATACTCCC 59.800 42.308 0.00 0.00 45.30 4.30
1728 1949 6.314899 AGCAGTTTAAGCTAAATACTCCCT 57.685 37.500 0.00 0.00 41.32 4.20
1729 1950 6.722328 AGCAGTTTAAGCTAAATACTCCCTT 58.278 36.000 0.00 0.00 41.32 3.95
1730 1951 7.175797 AGCAGTTTAAGCTAAATACTCCCTTT 58.824 34.615 0.00 0.00 41.32 3.11
1731 1952 7.121315 AGCAGTTTAAGCTAAATACTCCCTTTG 59.879 37.037 0.00 0.00 41.32 2.77
1732 1953 7.251281 CAGTTTAAGCTAAATACTCCCTTTGC 58.749 38.462 0.00 0.00 0.00 3.68
1733 1954 7.121315 CAGTTTAAGCTAAATACTCCCTTTGCT 59.879 37.037 0.00 0.00 0.00 3.91
1734 1955 7.337184 AGTTTAAGCTAAATACTCCCTTTGCTC 59.663 37.037 0.00 0.00 0.00 4.26
1735 1956 4.157849 AGCTAAATACTCCCTTTGCTCC 57.842 45.455 0.00 0.00 0.00 4.70
1736 1957 3.783082 AGCTAAATACTCCCTTTGCTCCT 59.217 43.478 0.00 0.00 0.00 3.69
1737 1958 4.969359 AGCTAAATACTCCCTTTGCTCCTA 59.031 41.667 0.00 0.00 0.00 2.94
1738 1959 5.428783 AGCTAAATACTCCCTTTGCTCCTAA 59.571 40.000 0.00 0.00 0.00 2.69
1739 1960 6.069615 AGCTAAATACTCCCTTTGCTCCTAAA 60.070 38.462 0.00 0.00 0.00 1.85
1740 1961 6.773200 GCTAAATACTCCCTTTGCTCCTAAAT 59.227 38.462 0.00 0.00 0.00 1.40
1741 1962 7.937394 GCTAAATACTCCCTTTGCTCCTAAATA 59.063 37.037 0.00 0.00 0.00 1.40
1746 1967 7.453141 ACTCCCTTTGCTCCTAAATATAAGT 57.547 36.000 0.00 0.00 0.00 2.24
1747 1968 7.873195 ACTCCCTTTGCTCCTAAATATAAGTT 58.127 34.615 0.00 0.00 0.00 2.66
1748 1969 8.336987 ACTCCCTTTGCTCCTAAATATAAGTTT 58.663 33.333 0.00 0.00 0.00 2.66
1749 1970 9.190317 CTCCCTTTGCTCCTAAATATAAGTTTT 57.810 33.333 0.00 0.00 0.00 2.43
1750 1971 9.541884 TCCCTTTGCTCCTAAATATAAGTTTTT 57.458 29.630 0.00 0.00 0.00 1.94
1792 2013 8.988064 ATATTATATACGGAGCAAAGTGAGTG 57.012 34.615 0.00 0.00 0.00 3.51
1793 2014 6.459670 TTATATACGGAGCAAAGTGAGTGA 57.540 37.500 0.00 0.00 0.00 3.41
1794 2015 3.678056 ATACGGAGCAAAGTGAGTGAA 57.322 42.857 0.00 0.00 0.00 3.18
1795 2016 2.550830 ACGGAGCAAAGTGAGTGAAT 57.449 45.000 0.00 0.00 0.00 2.57
1796 2017 2.417719 ACGGAGCAAAGTGAGTGAATC 58.582 47.619 0.00 0.00 0.00 2.52
1797 2018 2.037772 ACGGAGCAAAGTGAGTGAATCT 59.962 45.455 0.00 0.00 0.00 2.40
1798 2019 3.258372 ACGGAGCAAAGTGAGTGAATCTA 59.742 43.478 0.00 0.00 0.00 1.98
1799 2020 3.614616 CGGAGCAAAGTGAGTGAATCTAC 59.385 47.826 0.00 0.00 0.00 2.59
1800 2021 4.569943 GGAGCAAAGTGAGTGAATCTACA 58.430 43.478 0.00 0.00 0.00 2.74
1801 2022 4.390297 GGAGCAAAGTGAGTGAATCTACAC 59.610 45.833 0.00 0.00 40.60 2.90
1899 2120 5.734498 GCACGTCAAATAAGTTGCTGAATAG 59.266 40.000 0.00 0.00 37.13 1.73
1900 2121 6.620733 GCACGTCAAATAAGTTGCTGAATAGT 60.621 38.462 0.00 0.00 37.13 2.12
1901 2122 6.738200 CACGTCAAATAAGTTGCTGAATAGTG 59.262 38.462 0.00 0.00 37.13 2.74
1902 2123 6.649141 ACGTCAAATAAGTTGCTGAATAGTGA 59.351 34.615 0.00 0.00 37.13 3.41
1903 2124 7.172532 ACGTCAAATAAGTTGCTGAATAGTGAA 59.827 33.333 0.00 0.00 37.13 3.18
1904 2125 8.177663 CGTCAAATAAGTTGCTGAATAGTGAAT 58.822 33.333 0.00 0.00 37.13 2.57
1971 2194 8.557029 GTCTGGGCATTATTATAAACAGTGTAC 58.443 37.037 0.00 0.00 0.00 2.90
1972 2195 7.439955 TCTGGGCATTATTATAAACAGTGTACG 59.560 37.037 0.00 0.00 0.00 3.67
2014 2246 3.587923 CCGGTACCATTGTCGACTTTTA 58.412 45.455 17.92 0.00 0.00 1.52
2019 2251 6.347888 CGGTACCATTGTCGACTTTTATTTGT 60.348 38.462 17.92 5.86 0.00 2.83
2109 2341 3.895041 CGGATATGCCTTTTTATTGGGGT 59.105 43.478 0.00 0.00 0.00 4.95
2215 2447 5.833131 GGGAGAAAATATCATAAACCAGGCA 59.167 40.000 0.00 0.00 0.00 4.75
2225 2457 6.509418 TCATAAACCAGGCAATTAGAACAC 57.491 37.500 0.00 0.00 0.00 3.32
2226 2458 3.915437 AAACCAGGCAATTAGAACACG 57.085 42.857 0.00 0.00 0.00 4.49
2227 2459 1.821216 ACCAGGCAATTAGAACACGG 58.179 50.000 0.00 0.00 0.00 4.94
2228 2460 1.349688 ACCAGGCAATTAGAACACGGA 59.650 47.619 0.00 0.00 0.00 4.69
2229 2461 1.737793 CCAGGCAATTAGAACACGGAC 59.262 52.381 0.00 0.00 0.00 4.79
2230 2462 2.615493 CCAGGCAATTAGAACACGGACT 60.615 50.000 0.00 0.00 0.00 3.85
2231 2463 2.673368 CAGGCAATTAGAACACGGACTC 59.327 50.000 0.00 0.00 0.00 3.36
2232 2464 1.659098 GGCAATTAGAACACGGACTCG 59.341 52.381 0.00 0.00 43.02 4.18
2233 2465 1.060698 GCAATTAGAACACGGACTCGC 59.939 52.381 0.00 0.00 40.63 5.03
2234 2466 2.333926 CAATTAGAACACGGACTCGCA 58.666 47.619 0.00 0.00 40.63 5.10
2235 2467 2.734606 CAATTAGAACACGGACTCGCAA 59.265 45.455 0.00 0.00 40.63 4.85
2236 2468 2.512485 TTAGAACACGGACTCGCAAA 57.488 45.000 0.00 0.00 40.63 3.68
2237 2469 2.736144 TAGAACACGGACTCGCAAAT 57.264 45.000 0.00 0.00 40.63 2.32
2238 2470 1.429463 AGAACACGGACTCGCAAATC 58.571 50.000 0.00 0.00 40.63 2.17
2239 2471 1.000955 AGAACACGGACTCGCAAATCT 59.999 47.619 0.00 0.00 40.63 2.40
2240 2472 1.126846 GAACACGGACTCGCAAATCTG 59.873 52.381 0.00 0.00 40.63 2.90
2241 2473 0.670546 ACACGGACTCGCAAATCTGG 60.671 55.000 0.00 0.00 40.63 3.86
2242 2474 1.741770 ACGGACTCGCAAATCTGGC 60.742 57.895 0.00 0.00 40.63 4.85
2243 2475 2.464459 CGGACTCGCAAATCTGGCC 61.464 63.158 0.00 0.00 0.00 5.36
2244 2476 2.115291 GGACTCGCAAATCTGGCCC 61.115 63.158 0.00 0.00 0.00 5.80
2245 2477 2.436646 ACTCGCAAATCTGGCCCG 60.437 61.111 0.00 0.00 0.00 6.13
2246 2478 3.880846 CTCGCAAATCTGGCCCGC 61.881 66.667 0.00 0.00 0.00 6.13
2247 2479 4.713735 TCGCAAATCTGGCCCGCA 62.714 61.111 0.00 0.00 0.00 5.69
2248 2480 4.183686 CGCAAATCTGGCCCGCAG 62.184 66.667 0.00 0.00 0.00 5.18
2249 2481 2.751436 GCAAATCTGGCCCGCAGA 60.751 61.111 0.00 0.00 0.00 4.26
2250 2482 3.056313 GCAAATCTGGCCCGCAGAC 62.056 63.158 0.00 0.00 0.00 3.51
2251 2483 2.436646 AAATCTGGCCCGCAGACG 60.437 61.111 0.00 0.00 39.67 4.18
2261 2493 3.842126 CGCAGACGCATGTGGACG 61.842 66.667 11.65 4.76 38.40 4.79
2262 2494 4.152625 GCAGACGCATGTGGACGC 62.153 66.667 11.65 5.78 38.36 5.19
2278 2510 2.335369 GCGTCCGCGGATACTGAT 59.665 61.111 33.58 0.00 38.78 2.90
2279 2511 1.299926 GCGTCCGCGGATACTGATT 60.300 57.895 33.58 0.00 38.78 2.57
2280 2512 1.548973 GCGTCCGCGGATACTGATTG 61.549 60.000 33.58 14.17 38.78 2.67
2281 2513 0.939577 CGTCCGCGGATACTGATTGG 60.940 60.000 33.58 8.29 0.00 3.16
2282 2514 0.387929 GTCCGCGGATACTGATTGGA 59.612 55.000 33.58 0.00 0.00 3.53
2283 2515 0.387929 TCCGCGGATACTGATTGGAC 59.612 55.000 27.28 0.00 0.00 4.02
2284 2516 0.104120 CCGCGGATACTGATTGGACA 59.896 55.000 24.07 0.00 0.00 4.02
2285 2517 1.209128 CGCGGATACTGATTGGACAC 58.791 55.000 0.00 0.00 0.00 3.67
2286 2518 1.583054 GCGGATACTGATTGGACACC 58.417 55.000 0.00 0.00 0.00 4.16
2287 2519 1.139058 GCGGATACTGATTGGACACCT 59.861 52.381 0.00 0.00 0.00 4.00
2288 2520 2.803492 GCGGATACTGATTGGACACCTC 60.803 54.545 0.00 0.00 0.00 3.85
2289 2521 2.695666 CGGATACTGATTGGACACCTCT 59.304 50.000 0.00 0.00 0.00 3.69
2290 2522 3.243569 CGGATACTGATTGGACACCTCTC 60.244 52.174 0.00 0.00 0.00 3.20
2291 2523 3.706594 GGATACTGATTGGACACCTCTCA 59.293 47.826 0.00 0.00 0.00 3.27
2292 2524 4.162320 GGATACTGATTGGACACCTCTCAA 59.838 45.833 0.00 0.00 0.00 3.02
2293 2525 5.338381 GGATACTGATTGGACACCTCTCAAA 60.338 44.000 0.00 0.00 0.00 2.69
2294 2526 4.647564 ACTGATTGGACACCTCTCAAAT 57.352 40.909 0.00 0.00 0.00 2.32
2295 2527 5.762179 ACTGATTGGACACCTCTCAAATA 57.238 39.130 0.00 0.00 0.00 1.40
2296 2528 6.319048 ACTGATTGGACACCTCTCAAATAT 57.681 37.500 0.00 0.00 0.00 1.28
2297 2529 6.352516 ACTGATTGGACACCTCTCAAATATC 58.647 40.000 0.00 0.00 0.00 1.63
2298 2530 5.359756 TGATTGGACACCTCTCAAATATCG 58.640 41.667 0.00 0.00 0.00 2.92
2299 2531 3.179443 TGGACACCTCTCAAATATCGC 57.821 47.619 0.00 0.00 0.00 4.58
2300 2532 2.158957 TGGACACCTCTCAAATATCGCC 60.159 50.000 0.00 0.00 0.00 5.54
2301 2533 2.103263 GGACACCTCTCAAATATCGCCT 59.897 50.000 0.00 0.00 0.00 5.52
2302 2534 3.385577 GACACCTCTCAAATATCGCCTC 58.614 50.000 0.00 0.00 0.00 4.70
2303 2535 2.766263 ACACCTCTCAAATATCGCCTCA 59.234 45.455 0.00 0.00 0.00 3.86
2304 2536 3.126831 CACCTCTCAAATATCGCCTCAC 58.873 50.000 0.00 0.00 0.00 3.51
2305 2537 2.766263 ACCTCTCAAATATCGCCTCACA 59.234 45.455 0.00 0.00 0.00 3.58
2306 2538 3.126831 CCTCTCAAATATCGCCTCACAC 58.873 50.000 0.00 0.00 0.00 3.82
2307 2539 3.430790 CCTCTCAAATATCGCCTCACACA 60.431 47.826 0.00 0.00 0.00 3.72
2308 2540 4.375272 CTCTCAAATATCGCCTCACACAT 58.625 43.478 0.00 0.00 0.00 3.21
2309 2541 4.769688 TCTCAAATATCGCCTCACACATT 58.230 39.130 0.00 0.00 0.00 2.71
2310 2542 5.185454 TCTCAAATATCGCCTCACACATTT 58.815 37.500 0.00 0.00 0.00 2.32
2311 2543 6.345298 TCTCAAATATCGCCTCACACATTTA 58.655 36.000 0.00 0.00 0.00 1.40
2312 2544 6.257849 TCTCAAATATCGCCTCACACATTTAC 59.742 38.462 0.00 0.00 0.00 2.01
2313 2545 5.877564 TCAAATATCGCCTCACACATTTACA 59.122 36.000 0.00 0.00 0.00 2.41
2314 2546 6.542005 TCAAATATCGCCTCACACATTTACAT 59.458 34.615 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.486716 CATTCTCCTCCCTCCTTTCCT 58.513 52.381 0.00 0.00 0.00 3.36
1 2 1.492599 CCATTCTCCTCCCTCCTTTCC 59.507 57.143 0.00 0.00 0.00 3.13
2 3 2.437651 CTCCATTCTCCTCCCTCCTTTC 59.562 54.545 0.00 0.00 0.00 2.62
3 4 2.486716 CTCCATTCTCCTCCCTCCTTT 58.513 52.381 0.00 0.00 0.00 3.11
4 5 1.344906 CCTCCATTCTCCTCCCTCCTT 60.345 57.143 0.00 0.00 0.00 3.36
5 6 0.267356 CCTCCATTCTCCTCCCTCCT 59.733 60.000 0.00 0.00 0.00 3.69
6 7 0.266152 TCCTCCATTCTCCTCCCTCC 59.734 60.000 0.00 0.00 0.00 4.30
7 8 1.715785 CTCCTCCATTCTCCTCCCTC 58.284 60.000 0.00 0.00 0.00 4.30
8 9 0.399806 GCTCCTCCATTCTCCTCCCT 60.400 60.000 0.00 0.00 0.00 4.20
9 10 0.399806 AGCTCCTCCATTCTCCTCCC 60.400 60.000 0.00 0.00 0.00 4.30
10 11 1.140652 CAAGCTCCTCCATTCTCCTCC 59.859 57.143 0.00 0.00 0.00 4.30
11 12 1.140652 CCAAGCTCCTCCATTCTCCTC 59.859 57.143 0.00 0.00 0.00 3.71
12 13 1.211456 CCAAGCTCCTCCATTCTCCT 58.789 55.000 0.00 0.00 0.00 3.69
13 14 0.182299 CCCAAGCTCCTCCATTCTCC 59.818 60.000 0.00 0.00 0.00 3.71
14 15 0.915364 ACCCAAGCTCCTCCATTCTC 59.085 55.000 0.00 0.00 0.00 2.87
15 16 1.005215 CAACCCAAGCTCCTCCATTCT 59.995 52.381 0.00 0.00 0.00 2.40
16 17 1.467920 CAACCCAAGCTCCTCCATTC 58.532 55.000 0.00 0.00 0.00 2.67
17 18 0.040204 CCAACCCAAGCTCCTCCATT 59.960 55.000 0.00 0.00 0.00 3.16
18 19 0.846427 TCCAACCCAAGCTCCTCCAT 60.846 55.000 0.00 0.00 0.00 3.41
19 20 0.846427 ATCCAACCCAAGCTCCTCCA 60.846 55.000 0.00 0.00 0.00 3.86
20 21 1.213296 TATCCAACCCAAGCTCCTCC 58.787 55.000 0.00 0.00 0.00 4.30
21 22 2.505819 TCTTATCCAACCCAAGCTCCTC 59.494 50.000 0.00 0.00 0.00 3.71
22 23 2.507471 CTCTTATCCAACCCAAGCTCCT 59.493 50.000 0.00 0.00 0.00 3.69
23 24 2.422093 CCTCTTATCCAACCCAAGCTCC 60.422 54.545 0.00 0.00 0.00 4.70
24 25 2.422093 CCCTCTTATCCAACCCAAGCTC 60.422 54.545 0.00 0.00 0.00 4.09
25 26 1.566231 CCCTCTTATCCAACCCAAGCT 59.434 52.381 0.00 0.00 0.00 3.74
26 27 1.285078 ACCCTCTTATCCAACCCAAGC 59.715 52.381 0.00 0.00 0.00 4.01
27 28 3.739401 AACCCTCTTATCCAACCCAAG 57.261 47.619 0.00 0.00 0.00 3.61
28 29 5.974370 ACTATAACCCTCTTATCCAACCCAA 59.026 40.000 0.00 0.00 0.00 4.12
29 30 5.368523 CACTATAACCCTCTTATCCAACCCA 59.631 44.000 0.00 0.00 0.00 4.51
30 31 5.221864 CCACTATAACCCTCTTATCCAACCC 60.222 48.000 0.00 0.00 0.00 4.11
31 32 5.605488 TCCACTATAACCCTCTTATCCAACC 59.395 44.000 0.00 0.00 0.00 3.77
32 33 6.742559 TCCACTATAACCCTCTTATCCAAC 57.257 41.667 0.00 0.00 0.00 3.77
33 34 6.329197 CCTTCCACTATAACCCTCTTATCCAA 59.671 42.308 0.00 0.00 0.00 3.53
34 35 5.844516 CCTTCCACTATAACCCTCTTATCCA 59.155 44.000 0.00 0.00 0.00 3.41
35 36 5.248705 CCCTTCCACTATAACCCTCTTATCC 59.751 48.000 0.00 0.00 0.00 2.59
36 37 5.248705 CCCCTTCCACTATAACCCTCTTATC 59.751 48.000 0.00 0.00 0.00 1.75
37 38 5.102346 TCCCCTTCCACTATAACCCTCTTAT 60.102 44.000 0.00 0.00 0.00 1.73
38 39 4.235873 TCCCCTTCCACTATAACCCTCTTA 59.764 45.833 0.00 0.00 0.00 2.10
39 40 3.014807 TCCCCTTCCACTATAACCCTCTT 59.985 47.826 0.00 0.00 0.00 2.85
40 41 2.595380 TCCCCTTCCACTATAACCCTCT 59.405 50.000 0.00 0.00 0.00 3.69
41 42 2.973406 CTCCCCTTCCACTATAACCCTC 59.027 54.545 0.00 0.00 0.00 4.30
42 43 2.964803 GCTCCCCTTCCACTATAACCCT 60.965 54.545 0.00 0.00 0.00 4.34
43 44 1.420514 GCTCCCCTTCCACTATAACCC 59.579 57.143 0.00 0.00 0.00 4.11
44 45 2.369203 GAGCTCCCCTTCCACTATAACC 59.631 54.545 0.87 0.00 0.00 2.85
45 46 2.036089 CGAGCTCCCCTTCCACTATAAC 59.964 54.545 8.47 0.00 0.00 1.89
46 47 2.317040 CGAGCTCCCCTTCCACTATAA 58.683 52.381 8.47 0.00 0.00 0.98
47 48 1.217183 ACGAGCTCCCCTTCCACTATA 59.783 52.381 8.47 0.00 0.00 1.31
48 49 0.032017 ACGAGCTCCCCTTCCACTAT 60.032 55.000 8.47 0.00 0.00 2.12
49 50 0.683504 GACGAGCTCCCCTTCCACTA 60.684 60.000 8.47 0.00 0.00 2.74
50 51 1.985116 GACGAGCTCCCCTTCCACT 60.985 63.158 8.47 0.00 0.00 4.00
51 52 2.232298 CTGACGAGCTCCCCTTCCAC 62.232 65.000 8.47 0.00 0.00 4.02
52 53 1.984570 CTGACGAGCTCCCCTTCCA 60.985 63.158 8.47 0.00 0.00 3.53
53 54 1.671901 CTCTGACGAGCTCCCCTTCC 61.672 65.000 8.47 0.00 0.00 3.46
54 55 0.681564 TCTCTGACGAGCTCCCCTTC 60.682 60.000 8.47 0.22 37.19 3.46
55 56 0.251832 TTCTCTGACGAGCTCCCCTT 60.252 55.000 8.47 0.00 37.19 3.95
56 57 0.968393 GTTCTCTGACGAGCTCCCCT 60.968 60.000 8.47 0.00 37.19 4.79
57 58 1.513622 GTTCTCTGACGAGCTCCCC 59.486 63.158 8.47 0.17 37.19 4.81
58 59 1.251527 TGGTTCTCTGACGAGCTCCC 61.252 60.000 8.47 0.57 37.19 4.30
59 60 0.603569 TTGGTTCTCTGACGAGCTCC 59.396 55.000 8.47 0.00 37.19 4.70
60 61 1.989430 CTTGGTTCTCTGACGAGCTC 58.011 55.000 2.73 2.73 37.19 4.09
61 62 0.037790 GCTTGGTTCTCTGACGAGCT 60.038 55.000 0.00 0.00 37.19 4.09
62 63 1.016653 GGCTTGGTTCTCTGACGAGC 61.017 60.000 0.00 0.00 37.19 5.03
63 64 0.734253 CGGCTTGGTTCTCTGACGAG 60.734 60.000 0.00 0.00 38.67 4.18
64 65 1.289066 CGGCTTGGTTCTCTGACGA 59.711 57.895 0.00 0.00 0.00 4.20
65 66 1.738099 CCGGCTTGGTTCTCTGACG 60.738 63.158 0.00 0.00 0.00 4.35
66 67 2.035442 GCCGGCTTGGTTCTCTGAC 61.035 63.158 22.15 0.00 41.21 3.51
67 68 2.347490 GCCGGCTTGGTTCTCTGA 59.653 61.111 22.15 0.00 41.21 3.27
68 69 2.032528 TGCCGGCTTGGTTCTCTG 59.967 61.111 29.70 0.00 41.21 3.35
69 70 1.557269 ATCTGCCGGCTTGGTTCTCT 61.557 55.000 29.70 0.00 41.21 3.10
70 71 1.078143 ATCTGCCGGCTTGGTTCTC 60.078 57.895 29.70 0.00 41.21 2.87
71 72 1.078143 GATCTGCCGGCTTGGTTCT 60.078 57.895 29.70 4.90 41.21 3.01
72 73 2.464459 CGATCTGCCGGCTTGGTTC 61.464 63.158 29.70 18.81 41.21 3.62
73 74 2.436646 CGATCTGCCGGCTTGGTT 60.437 61.111 29.70 12.50 41.21 3.67
74 75 2.859273 CTTCGATCTGCCGGCTTGGT 62.859 60.000 29.70 17.06 41.21 3.67
75 76 2.125147 TTCGATCTGCCGGCTTGG 60.125 61.111 29.70 17.48 42.50 3.61
76 77 2.176273 CCTTCGATCTGCCGGCTTG 61.176 63.158 29.70 20.24 0.00 4.01
77 78 1.899437 TTCCTTCGATCTGCCGGCTT 61.899 55.000 29.70 12.77 0.00 4.35
78 79 1.899437 TTTCCTTCGATCTGCCGGCT 61.899 55.000 29.70 7.33 0.00 5.52
79 80 1.432270 CTTTCCTTCGATCTGCCGGC 61.432 60.000 22.73 22.73 0.00 6.13
80 81 0.811616 CCTTTCCTTCGATCTGCCGG 60.812 60.000 0.00 0.00 0.00 6.13
81 82 0.108138 ACCTTTCCTTCGATCTGCCG 60.108 55.000 0.00 0.00 0.00 5.69
82 83 1.373570 CACCTTTCCTTCGATCTGCC 58.626 55.000 0.00 0.00 0.00 4.85
83 84 0.729690 GCACCTTTCCTTCGATCTGC 59.270 55.000 0.00 0.00 0.00 4.26
84 85 1.373570 GGCACCTTTCCTTCGATCTG 58.626 55.000 0.00 0.00 0.00 2.90
85 86 3.863407 GGCACCTTTCCTTCGATCT 57.137 52.632 0.00 0.00 0.00 2.75
106 107 3.815962 CCATCTCTCTCAAGCCATTGATG 59.184 47.826 0.00 0.00 44.32 3.07
107 108 3.181442 CCCATCTCTCTCAAGCCATTGAT 60.181 47.826 0.00 0.00 44.32 2.57
108 109 2.172082 CCCATCTCTCTCAAGCCATTGA 59.828 50.000 0.00 0.00 43.20 2.57
109 110 2.573369 CCCATCTCTCTCAAGCCATTG 58.427 52.381 0.00 0.00 37.80 2.82
110 111 1.493871 CCCCATCTCTCTCAAGCCATT 59.506 52.381 0.00 0.00 0.00 3.16
111 112 1.138568 CCCCATCTCTCTCAAGCCAT 58.861 55.000 0.00 0.00 0.00 4.40
112 113 0.043183 TCCCCATCTCTCTCAAGCCA 59.957 55.000 0.00 0.00 0.00 4.75
113 114 1.134250 GTTCCCCATCTCTCTCAAGCC 60.134 57.143 0.00 0.00 0.00 4.35
114 115 1.472376 CGTTCCCCATCTCTCTCAAGC 60.472 57.143 0.00 0.00 0.00 4.01
115 116 2.103373 TCGTTCCCCATCTCTCTCAAG 58.897 52.381 0.00 0.00 0.00 3.02
116 117 2.231716 TCGTTCCCCATCTCTCTCAA 57.768 50.000 0.00 0.00 0.00 3.02
117 118 2.034878 CATCGTTCCCCATCTCTCTCA 58.965 52.381 0.00 0.00 0.00 3.27
118 119 1.342819 CCATCGTTCCCCATCTCTCTC 59.657 57.143 0.00 0.00 0.00 3.20
119 120 1.418334 CCATCGTTCCCCATCTCTCT 58.582 55.000 0.00 0.00 0.00 3.10
120 121 0.394565 CCCATCGTTCCCCATCTCTC 59.605 60.000 0.00 0.00 0.00 3.20
121 122 0.031111 TCCCATCGTTCCCCATCTCT 60.031 55.000 0.00 0.00 0.00 3.10
122 123 0.394565 CTCCCATCGTTCCCCATCTC 59.605 60.000 0.00 0.00 0.00 2.75
123 124 0.031111 TCTCCCATCGTTCCCCATCT 60.031 55.000 0.00 0.00 0.00 2.90
124 125 0.394565 CTCTCCCATCGTTCCCCATC 59.605 60.000 0.00 0.00 0.00 3.51
125 126 0.031111 TCTCTCCCATCGTTCCCCAT 60.031 55.000 0.00 0.00 0.00 4.00
126 127 0.687757 CTCTCTCCCATCGTTCCCCA 60.688 60.000 0.00 0.00 0.00 4.96
127 128 1.403687 CCTCTCTCCCATCGTTCCCC 61.404 65.000 0.00 0.00 0.00 4.81
128 129 0.397254 TCCTCTCTCCCATCGTTCCC 60.397 60.000 0.00 0.00 0.00 3.97
129 130 1.486211 TTCCTCTCTCCCATCGTTCC 58.514 55.000 0.00 0.00 0.00 3.62
130 131 3.195825 TCTTTTCCTCTCTCCCATCGTTC 59.804 47.826 0.00 0.00 0.00 3.95
131 132 3.173965 TCTTTTCCTCTCTCCCATCGTT 58.826 45.455 0.00 0.00 0.00 3.85
132 133 2.821437 TCTTTTCCTCTCTCCCATCGT 58.179 47.619 0.00 0.00 0.00 3.73
133 134 3.895232 TTCTTTTCCTCTCTCCCATCG 57.105 47.619 0.00 0.00 0.00 3.84
156 157 3.558608 TCCCTTCCCATCATGGTTTTT 57.441 42.857 2.07 0.00 35.17 1.94
157 158 3.782413 ATCCCTTCCCATCATGGTTTT 57.218 42.857 2.07 0.00 35.17 2.43
158 159 4.482025 TCTTATCCCTTCCCATCATGGTTT 59.518 41.667 2.07 0.00 35.17 3.27
159 160 4.054369 TCTTATCCCTTCCCATCATGGTT 58.946 43.478 2.07 0.00 35.17 3.67
160 161 3.654806 CTCTTATCCCTTCCCATCATGGT 59.345 47.826 2.07 0.00 35.17 3.55
161 162 3.560882 GCTCTTATCCCTTCCCATCATGG 60.561 52.174 0.00 0.00 37.25 3.66
162 163 3.683802 GCTCTTATCCCTTCCCATCATG 58.316 50.000 0.00 0.00 0.00 3.07
163 164 2.304180 CGCTCTTATCCCTTCCCATCAT 59.696 50.000 0.00 0.00 0.00 2.45
164 165 1.694150 CGCTCTTATCCCTTCCCATCA 59.306 52.381 0.00 0.00 0.00 3.07
165 166 1.971357 TCGCTCTTATCCCTTCCCATC 59.029 52.381 0.00 0.00 0.00 3.51
166 167 2.103153 TCGCTCTTATCCCTTCCCAT 57.897 50.000 0.00 0.00 0.00 4.00
167 168 1.762957 CTTCGCTCTTATCCCTTCCCA 59.237 52.381 0.00 0.00 0.00 4.37
168 169 1.541452 GCTTCGCTCTTATCCCTTCCC 60.541 57.143 0.00 0.00 0.00 3.97
169 170 1.870167 CGCTTCGCTCTTATCCCTTCC 60.870 57.143 0.00 0.00 0.00 3.46
170 171 1.492720 CGCTTCGCTCTTATCCCTTC 58.507 55.000 0.00 0.00 0.00 3.46
171 172 0.105039 CCGCTTCGCTCTTATCCCTT 59.895 55.000 0.00 0.00 0.00 3.95
172 173 0.755698 TCCGCTTCGCTCTTATCCCT 60.756 55.000 0.00 0.00 0.00 4.20
173 174 0.318762 ATCCGCTTCGCTCTTATCCC 59.681 55.000 0.00 0.00 0.00 3.85
174 175 3.057456 TCTTATCCGCTTCGCTCTTATCC 60.057 47.826 0.00 0.00 0.00 2.59
175 176 4.162096 TCTTATCCGCTTCGCTCTTATC 57.838 45.455 0.00 0.00 0.00 1.75
176 177 4.299978 GTTCTTATCCGCTTCGCTCTTAT 58.700 43.478 0.00 0.00 0.00 1.73
177 178 3.703420 GTTCTTATCCGCTTCGCTCTTA 58.297 45.455 0.00 0.00 0.00 2.10
178 179 2.541556 GTTCTTATCCGCTTCGCTCTT 58.458 47.619 0.00 0.00 0.00 2.85
179 180 1.534175 CGTTCTTATCCGCTTCGCTCT 60.534 52.381 0.00 0.00 0.00 4.09
180 181 0.847035 CGTTCTTATCCGCTTCGCTC 59.153 55.000 0.00 0.00 0.00 5.03
181 182 0.527817 CCGTTCTTATCCGCTTCGCT 60.528 55.000 0.00 0.00 0.00 4.93
182 183 0.526954 TCCGTTCTTATCCGCTTCGC 60.527 55.000 0.00 0.00 0.00 4.70
183 184 1.852895 CTTCCGTTCTTATCCGCTTCG 59.147 52.381 0.00 0.00 0.00 3.79
184 185 1.593469 GCTTCCGTTCTTATCCGCTTC 59.407 52.381 0.00 0.00 0.00 3.86
185 186 1.653151 GCTTCCGTTCTTATCCGCTT 58.347 50.000 0.00 0.00 0.00 4.68
186 187 0.179081 GGCTTCCGTTCTTATCCGCT 60.179 55.000 0.00 0.00 0.00 5.52
187 188 0.461339 TGGCTTCCGTTCTTATCCGC 60.461 55.000 0.00 0.00 0.00 5.54
188 189 1.136305 TCTGGCTTCCGTTCTTATCCG 59.864 52.381 0.00 0.00 0.00 4.18
189 190 2.431057 TCTCTGGCTTCCGTTCTTATCC 59.569 50.000 0.00 0.00 0.00 2.59
190 191 3.131400 ACTCTCTGGCTTCCGTTCTTATC 59.869 47.826 0.00 0.00 0.00 1.75
191 192 3.100671 ACTCTCTGGCTTCCGTTCTTAT 58.899 45.455 0.00 0.00 0.00 1.73
192 193 2.526432 ACTCTCTGGCTTCCGTTCTTA 58.474 47.619 0.00 0.00 0.00 2.10
193 194 1.343069 ACTCTCTGGCTTCCGTTCTT 58.657 50.000 0.00 0.00 0.00 2.52
194 195 2.096248 CTACTCTCTGGCTTCCGTTCT 58.904 52.381 0.00 0.00 0.00 3.01
195 196 1.819903 ACTACTCTCTGGCTTCCGTTC 59.180 52.381 0.00 0.00 0.00 3.95
196 197 1.546476 CACTACTCTCTGGCTTCCGTT 59.454 52.381 0.00 0.00 0.00 4.44
197 198 1.178276 CACTACTCTCTGGCTTCCGT 58.822 55.000 0.00 0.00 0.00 4.69
198 199 0.179124 GCACTACTCTCTGGCTTCCG 60.179 60.000 0.00 0.00 0.00 4.30
199 200 0.179124 CGCACTACTCTCTGGCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
200 201 0.528470 ACGCACTACTCTCTGGCTTC 59.472 55.000 0.00 0.00 0.00 3.86
201 202 0.244994 CACGCACTACTCTCTGGCTT 59.755 55.000 0.00 0.00 0.00 4.35
202 203 1.599606 CCACGCACTACTCTCTGGCT 61.600 60.000 0.00 0.00 0.00 4.75
203 204 1.153745 CCACGCACTACTCTCTGGC 60.154 63.158 0.00 0.00 0.00 4.85
204 205 1.132643 GTACCACGCACTACTCTCTGG 59.867 57.143 0.00 0.00 0.00 3.86
205 206 1.810755 TGTACCACGCACTACTCTCTG 59.189 52.381 0.00 0.00 0.00 3.35
206 207 2.195741 TGTACCACGCACTACTCTCT 57.804 50.000 0.00 0.00 0.00 3.10
207 208 3.505464 AATGTACCACGCACTACTCTC 57.495 47.619 0.00 0.00 0.00 3.20
208 209 3.006537 ACAAATGTACCACGCACTACTCT 59.993 43.478 0.00 0.00 0.00 3.24
209 210 3.323243 ACAAATGTACCACGCACTACTC 58.677 45.455 0.00 0.00 0.00 2.59
210 211 3.396260 ACAAATGTACCACGCACTACT 57.604 42.857 0.00 0.00 0.00 2.57
211 212 4.572950 GTACAAATGTACCACGCACTAC 57.427 45.455 11.76 0.00 43.73 2.73
222 223 4.202472 TGTGTGGACCCATGTACAAATGTA 60.202 41.667 0.00 0.00 36.97 2.29
223 224 3.153919 GTGTGGACCCATGTACAAATGT 58.846 45.455 0.00 0.00 36.97 2.71
224 225 3.153130 TGTGTGGACCCATGTACAAATG 58.847 45.455 0.00 0.00 36.97 2.32
225 226 3.073798 TCTGTGTGGACCCATGTACAAAT 59.926 43.478 0.00 0.00 36.97 2.32
226 227 2.439880 TCTGTGTGGACCCATGTACAAA 59.560 45.455 0.00 0.00 36.97 2.83
227 228 2.050918 TCTGTGTGGACCCATGTACAA 58.949 47.619 0.00 0.00 36.97 2.41
228 229 1.346395 GTCTGTGTGGACCCATGTACA 59.654 52.381 0.00 0.00 30.98 2.90
229 230 1.671850 CGTCTGTGTGGACCCATGTAC 60.672 57.143 0.00 0.00 33.07 2.90
230 231 0.606096 CGTCTGTGTGGACCCATGTA 59.394 55.000 0.00 0.00 33.07 2.29
231 232 1.371183 CGTCTGTGTGGACCCATGT 59.629 57.895 0.00 0.00 33.07 3.21
232 233 2.034879 GCGTCTGTGTGGACCCATG 61.035 63.158 0.00 0.00 33.07 3.66
233 234 2.347490 GCGTCTGTGTGGACCCAT 59.653 61.111 0.00 0.00 33.07 4.00
234 235 4.293648 CGCGTCTGTGTGGACCCA 62.294 66.667 0.00 0.00 33.07 4.51
258 259 1.918868 CTAACTTTTGGGCCGGTCGC 61.919 60.000 1.90 4.53 0.00 5.19
259 260 1.918868 GCTAACTTTTGGGCCGGTCG 61.919 60.000 1.90 0.00 0.00 4.79
260 261 1.592400 GGCTAACTTTTGGGCCGGTC 61.592 60.000 1.90 0.00 35.08 4.79
261 262 1.605451 GGCTAACTTTTGGGCCGGT 60.605 57.895 1.90 0.00 35.08 5.28
262 263 3.284336 GGCTAACTTTTGGGCCGG 58.716 61.111 0.00 0.00 35.08 6.13
264 265 1.592400 GACCGGCTAACTTTTGGGCC 61.592 60.000 0.00 0.00 41.02 5.80
265 266 1.880894 GACCGGCTAACTTTTGGGC 59.119 57.895 0.00 0.00 0.00 5.36
266 267 0.604511 ACGACCGGCTAACTTTTGGG 60.605 55.000 0.00 0.00 0.00 4.12
267 268 0.794473 GACGACCGGCTAACTTTTGG 59.206 55.000 0.00 0.00 0.00 3.28
268 269 0.794473 GGACGACCGGCTAACTTTTG 59.206 55.000 0.00 0.00 0.00 2.44
269 270 3.222053 GGACGACCGGCTAACTTTT 57.778 52.632 0.00 0.00 0.00 2.27
280 281 2.090524 CGTTTACAGCCGGACGACC 61.091 63.158 5.05 0.00 37.69 4.79
281 282 0.940991 AACGTTTACAGCCGGACGAC 60.941 55.000 16.87 0.00 38.74 4.34
282 283 0.249405 AAACGTTTACAGCCGGACGA 60.249 50.000 12.83 0.00 38.74 4.20
283 284 1.124839 GTAAACGTTTACAGCCGGACG 59.875 52.381 34.98 7.77 41.93 4.79
284 285 1.460743 GGTAAACGTTTACAGCCGGAC 59.539 52.381 38.05 22.67 43.64 4.79
285 286 1.069823 TGGTAAACGTTTACAGCCGGA 59.930 47.619 38.05 19.56 43.64 5.14
286 287 1.510776 TGGTAAACGTTTACAGCCGG 58.489 50.000 38.05 0.00 43.64 6.13
287 288 2.545106 ACTTGGTAAACGTTTACAGCCG 59.455 45.455 38.05 27.74 43.64 5.52
288 289 4.035441 TCAACTTGGTAAACGTTTACAGCC 59.965 41.667 38.05 27.29 43.64 4.85
289 290 5.159399 TCAACTTGGTAAACGTTTACAGC 57.841 39.130 38.05 27.19 43.64 4.40
290 291 7.377662 GGAATTCAACTTGGTAAACGTTTACAG 59.622 37.037 38.05 31.49 43.64 2.74
291 292 7.067251 AGGAATTCAACTTGGTAAACGTTTACA 59.933 33.333 38.05 26.45 43.64 2.41
292 293 7.377662 CAGGAATTCAACTTGGTAAACGTTTAC 59.622 37.037 33.26 33.26 41.68 2.01
293 294 7.419204 CAGGAATTCAACTTGGTAAACGTTTA 58.581 34.615 16.59 16.59 0.00 2.01
294 295 6.270064 CAGGAATTCAACTTGGTAAACGTTT 58.730 36.000 18.90 18.90 0.00 3.60
295 296 5.221165 CCAGGAATTCAACTTGGTAAACGTT 60.221 40.000 7.93 0.00 31.30 3.99
296 297 4.277423 CCAGGAATTCAACTTGGTAAACGT 59.723 41.667 7.93 0.00 31.30 3.99
297 298 4.517453 TCCAGGAATTCAACTTGGTAAACG 59.483 41.667 7.93 0.00 36.20 3.60
298 299 6.350194 GGATCCAGGAATTCAACTTGGTAAAC 60.350 42.308 6.95 3.77 36.20 2.01
299 300 5.714806 GGATCCAGGAATTCAACTTGGTAAA 59.285 40.000 6.95 0.00 36.20 2.01
300 301 5.261216 GGATCCAGGAATTCAACTTGGTAA 58.739 41.667 6.95 0.00 36.20 2.85
301 302 4.625324 CGGATCCAGGAATTCAACTTGGTA 60.625 45.833 13.41 1.32 36.20 3.25
302 303 3.701664 GGATCCAGGAATTCAACTTGGT 58.298 45.455 6.95 1.29 36.20 3.67
303 304 2.684881 CGGATCCAGGAATTCAACTTGG 59.315 50.000 13.41 9.11 36.12 3.61
304 305 2.098117 GCGGATCCAGGAATTCAACTTG 59.902 50.000 13.41 0.10 0.00 3.16
305 306 2.025887 AGCGGATCCAGGAATTCAACTT 60.026 45.455 13.41 0.00 0.00 2.66
306 307 1.561542 AGCGGATCCAGGAATTCAACT 59.438 47.619 13.41 0.00 0.00 3.16
307 308 2.044123 AGCGGATCCAGGAATTCAAC 57.956 50.000 13.41 0.00 0.00 3.18
308 309 2.771943 ACTAGCGGATCCAGGAATTCAA 59.228 45.455 13.41 0.00 0.00 2.69
309 310 2.398588 ACTAGCGGATCCAGGAATTCA 58.601 47.619 13.41 0.00 0.00 2.57
310 311 3.134458 CAACTAGCGGATCCAGGAATTC 58.866 50.000 13.41 0.00 0.00 2.17
311 312 2.771943 TCAACTAGCGGATCCAGGAATT 59.228 45.455 13.41 0.00 0.00 2.17
312 313 2.398588 TCAACTAGCGGATCCAGGAAT 58.601 47.619 13.41 0.00 0.00 3.01
313 314 1.860641 TCAACTAGCGGATCCAGGAA 58.139 50.000 13.41 0.00 0.00 3.36
314 315 1.688735 CATCAACTAGCGGATCCAGGA 59.311 52.381 13.41 0.00 0.00 3.86
315 316 1.414181 ACATCAACTAGCGGATCCAGG 59.586 52.381 13.41 0.00 0.00 4.45
316 317 2.477825 CACATCAACTAGCGGATCCAG 58.522 52.381 13.41 4.13 0.00 3.86
317 318 1.473257 GCACATCAACTAGCGGATCCA 60.473 52.381 13.41 0.00 0.00 3.41
318 319 1.221414 GCACATCAACTAGCGGATCC 58.779 55.000 0.00 0.00 0.00 3.36
319 320 1.594862 GTGCACATCAACTAGCGGATC 59.405 52.381 13.17 0.00 0.00 3.36
320 321 1.066215 TGTGCACATCAACTAGCGGAT 60.066 47.619 17.42 0.00 0.00 4.18
321 322 0.320050 TGTGCACATCAACTAGCGGA 59.680 50.000 17.42 0.00 0.00 5.54
322 323 1.129251 CTTGTGCACATCAACTAGCGG 59.871 52.381 22.39 0.00 0.00 5.52
323 324 2.068519 TCTTGTGCACATCAACTAGCG 58.931 47.619 22.39 1.32 0.00 4.26
324 325 4.691860 AATCTTGTGCACATCAACTAGC 57.308 40.909 22.39 0.00 0.00 3.42
325 326 7.369803 ACTTAATCTTGTGCACATCAACTAG 57.630 36.000 22.39 13.97 0.00 2.57
326 327 8.840833 TTACTTAATCTTGTGCACATCAACTA 57.159 30.769 22.39 3.03 0.00 2.24
327 328 7.744087 TTACTTAATCTTGTGCACATCAACT 57.256 32.000 22.39 7.25 0.00 3.16
328 329 8.236586 TCATTACTTAATCTTGTGCACATCAAC 58.763 33.333 22.39 0.00 0.00 3.18
329 330 8.334263 TCATTACTTAATCTTGTGCACATCAA 57.666 30.769 22.39 9.59 0.00 2.57
330 331 7.920160 TCATTACTTAATCTTGTGCACATCA 57.080 32.000 22.39 10.69 0.00 3.07
331 332 9.793252 AAATCATTACTTAATCTTGTGCACATC 57.207 29.630 22.39 0.00 0.00 3.06
333 334 9.409312 CAAAATCATTACTTAATCTTGTGCACA 57.591 29.630 17.42 17.42 0.00 4.57
334 335 8.375465 GCAAAATCATTACTTAATCTTGTGCAC 58.625 33.333 10.75 10.75 33.26 4.57
335 336 8.087136 TGCAAAATCATTACTTAATCTTGTGCA 58.913 29.630 11.36 11.36 36.84 4.57
336 337 8.464770 TGCAAAATCATTACTTAATCTTGTGC 57.535 30.769 8.07 8.07 33.45 4.57
337 338 8.589629 GCTGCAAAATCATTACTTAATCTTGTG 58.410 33.333 0.00 0.00 0.00 3.33
338 339 7.761249 GGCTGCAAAATCATTACTTAATCTTGT 59.239 33.333 0.50 0.00 0.00 3.16
339 340 7.977853 AGGCTGCAAAATCATTACTTAATCTTG 59.022 33.333 0.50 0.00 0.00 3.02
340 341 7.977853 CAGGCTGCAAAATCATTACTTAATCTT 59.022 33.333 0.00 0.00 0.00 2.40
341 342 7.123247 ACAGGCTGCAAAATCATTACTTAATCT 59.877 33.333 15.89 0.00 0.00 2.40
342 343 7.260603 ACAGGCTGCAAAATCATTACTTAATC 58.739 34.615 15.89 0.00 0.00 1.75
343 344 7.174107 ACAGGCTGCAAAATCATTACTTAAT 57.826 32.000 15.89 0.00 0.00 1.40
344 345 6.588719 ACAGGCTGCAAAATCATTACTTAA 57.411 33.333 15.89 0.00 0.00 1.85
345 346 6.588719 AACAGGCTGCAAAATCATTACTTA 57.411 33.333 15.89 0.00 0.00 2.24
346 347 5.473066 AACAGGCTGCAAAATCATTACTT 57.527 34.783 15.89 0.00 0.00 2.24
347 348 5.232463 CAAACAGGCTGCAAAATCATTACT 58.768 37.500 15.89 0.00 0.00 2.24
348 349 4.143052 GCAAACAGGCTGCAAAATCATTAC 60.143 41.667 15.89 0.00 39.69 1.89
349 350 3.995705 GCAAACAGGCTGCAAAATCATTA 59.004 39.130 15.89 0.00 39.69 1.90
350 351 2.809696 GCAAACAGGCTGCAAAATCATT 59.190 40.909 15.89 0.00 39.69 2.57
351 352 2.224329 TGCAAACAGGCTGCAAAATCAT 60.224 40.909 15.89 0.00 46.47 2.45
352 353 1.138464 TGCAAACAGGCTGCAAAATCA 59.862 42.857 15.89 2.56 46.47 2.57
353 354 1.868469 TGCAAACAGGCTGCAAAATC 58.132 45.000 15.89 0.00 46.47 2.17
363 364 2.620242 ACAAAGTTGCTTGCAAACAGG 58.380 42.857 9.75 3.68 0.00 4.00
364 365 4.259371 CGTTACAAAGTTGCTTGCAAACAG 60.259 41.667 9.75 3.70 31.03 3.16
365 366 3.610242 CGTTACAAAGTTGCTTGCAAACA 59.390 39.130 9.75 0.00 31.03 2.83
366 367 3.854809 TCGTTACAAAGTTGCTTGCAAAC 59.145 39.130 9.75 0.00 0.00 2.93
367 368 4.098055 TCGTTACAAAGTTGCTTGCAAA 57.902 36.364 9.75 0.00 0.00 3.68
368 369 3.766676 TCGTTACAAAGTTGCTTGCAA 57.233 38.095 3.70 3.70 0.00 4.08
369 370 3.563808 AGATCGTTACAAAGTTGCTTGCA 59.436 39.130 0.00 0.00 0.00 4.08
370 371 4.147219 AGATCGTTACAAAGTTGCTTGC 57.853 40.909 0.00 0.00 0.00 4.01
371 372 7.449934 AAAAAGATCGTTACAAAGTTGCTTG 57.550 32.000 0.00 0.00 0.00 4.01
394 395 2.162264 ACAAAGTTCCCCCGGAAAAA 57.838 45.000 0.73 0.00 43.86 1.94
395 396 3.309600 TTACAAAGTTCCCCCGGAAAA 57.690 42.857 0.73 0.00 43.86 2.29
396 397 3.158676 CATTACAAAGTTCCCCCGGAAA 58.841 45.455 0.73 0.00 43.86 3.13
397 398 2.375845 TCATTACAAAGTTCCCCCGGAA 59.624 45.455 0.73 0.00 39.66 4.30
398 399 1.986631 TCATTACAAAGTTCCCCCGGA 59.013 47.619 0.73 0.00 0.00 5.14
399 400 2.500392 TCATTACAAAGTTCCCCCGG 57.500 50.000 0.00 0.00 0.00 5.73
400 401 3.886123 AGATCATTACAAAGTTCCCCCG 58.114 45.455 0.00 0.00 0.00 5.73
401 402 5.261216 TCAAGATCATTACAAAGTTCCCCC 58.739 41.667 0.00 0.00 0.00 5.40
402 403 7.122650 TCAATCAAGATCATTACAAAGTTCCCC 59.877 37.037 0.00 0.00 0.00 4.81
403 404 8.055279 TCAATCAAGATCATTACAAAGTTCCC 57.945 34.615 0.00 0.00 0.00 3.97
404 405 9.346725 GTTCAATCAAGATCATTACAAAGTTCC 57.653 33.333 0.00 0.00 0.00 3.62
424 425 3.445096 GCAATAGGTGGAGCAAGTTCAAT 59.555 43.478 0.00 0.00 0.00 2.57
448 449 4.019792 TCAGCTTATGCAAGGTTTGAGA 57.980 40.909 3.16 0.00 40.49 3.27
455 456 3.005684 TGGTTTGTTCAGCTTATGCAAGG 59.994 43.478 3.16 0.00 42.74 3.61
462 463 3.386078 TGGCAAATGGTTTGTTCAGCTTA 59.614 39.130 4.56 0.00 42.56 3.09
494 495 0.108207 GACAGATGGAGCCCCTGATG 59.892 60.000 11.39 0.00 0.00 3.07
524 527 1.644786 GACCTTGCCGTTTGGATCCG 61.645 60.000 7.39 0.00 37.49 4.18
627 630 3.230976 GGGGTGAGTTTCTGTTTGGATT 58.769 45.455 0.00 0.00 0.00 3.01
648 651 4.463209 CCGTGTGCAAACTTACTGTAATG 58.537 43.478 5.28 0.00 0.00 1.90
675 678 1.897398 ATGCGAGCGACGTGTTTTCC 61.897 55.000 0.00 0.00 44.60 3.13
754 758 1.064946 TTCGGTTTGCAGTTTGGCG 59.935 52.632 0.00 0.00 36.28 5.69
767 771 2.524887 TGTTCCCTCCCGTTCGGT 60.525 61.111 10.36 0.00 0.00 4.69
1316 1344 3.071459 GAAGTGGCGCGTCGTCATG 62.071 63.158 6.09 0.00 45.01 3.07
1317 1345 2.809601 GAAGTGGCGCGTCGTCAT 60.810 61.111 6.09 0.00 45.01 3.06
1318 1346 3.891586 GAGAAGTGGCGCGTCGTCA 62.892 63.158 6.09 2.50 39.83 4.35
1319 1347 3.173240 GAGAAGTGGCGCGTCGTC 61.173 66.667 6.09 3.14 0.00 4.20
1385 1413 1.454847 ACTCAAAGGGGCGCACAAA 60.455 52.632 13.89 0.00 0.00 2.83
1455 1483 3.451793 GTCACCCGCATGACATGTA 57.548 52.632 16.62 0.00 46.89 2.29
1456 1484 4.301505 GTCACCCGCATGACATGT 57.698 55.556 16.62 0.00 46.89 3.21
1469 1497 3.580794 AACGAAAACTACTTGCGTCAC 57.419 42.857 0.00 0.00 33.66 3.67
1538 1567 3.387374 TCATCACAACCCATGCTGTTTTT 59.613 39.130 0.00 0.00 0.00 1.94
1548 1577 2.291209 ATGCAGTTCATCACAACCCA 57.709 45.000 0.00 0.00 0.00 4.51
1597 1626 4.331168 GGAACTTGTTCCGAATCTCTGATG 59.669 45.833 15.61 0.00 0.00 3.07
1604 1633 3.003480 CAGGAGGAACTTGTTCCGAATC 58.997 50.000 22.18 15.84 45.64 2.52
1692 1912 7.769220 AGCTTAAACTGCTACGATTAAGTCTA 58.231 34.615 0.00 0.00 39.21 2.59
1693 1913 6.631962 AGCTTAAACTGCTACGATTAAGTCT 58.368 36.000 0.00 0.00 39.21 3.24
1708 1929 7.175797 AGCAAAGGGAGTATTTAGCTTAAACT 58.824 34.615 0.00 0.00 0.00 2.66
1721 1942 8.562949 ACTTATATTTAGGAGCAAAGGGAGTA 57.437 34.615 0.00 0.00 0.00 2.59
1722 1943 7.453141 ACTTATATTTAGGAGCAAAGGGAGT 57.547 36.000 0.00 0.00 0.00 3.85
1723 1944 8.753497 AAACTTATATTTAGGAGCAAAGGGAG 57.247 34.615 0.00 0.00 0.00 4.30
1724 1945 9.541884 AAAAACTTATATTTAGGAGCAAAGGGA 57.458 29.630 0.00 0.00 0.00 4.20
1767 1988 8.803235 TCACTCACTTTGCTCCGTATATAATAT 58.197 33.333 0.00 0.00 0.00 1.28
1768 1989 8.173542 TCACTCACTTTGCTCCGTATATAATA 57.826 34.615 0.00 0.00 0.00 0.98
1769 1990 7.050970 TCACTCACTTTGCTCCGTATATAAT 57.949 36.000 0.00 0.00 0.00 1.28
1770 1991 6.459670 TCACTCACTTTGCTCCGTATATAA 57.540 37.500 0.00 0.00 0.00 0.98
1771 1992 6.459670 TTCACTCACTTTGCTCCGTATATA 57.540 37.500 0.00 0.00 0.00 0.86
1772 1993 5.339008 TTCACTCACTTTGCTCCGTATAT 57.661 39.130 0.00 0.00 0.00 0.86
1773 1994 4.794278 TTCACTCACTTTGCTCCGTATA 57.206 40.909 0.00 0.00 0.00 1.47
1774 1995 3.678056 TTCACTCACTTTGCTCCGTAT 57.322 42.857 0.00 0.00 0.00 3.06
1775 1996 3.258372 AGATTCACTCACTTTGCTCCGTA 59.742 43.478 0.00 0.00 0.00 4.02
1776 1997 2.037772 AGATTCACTCACTTTGCTCCGT 59.962 45.455 0.00 0.00 0.00 4.69
1777 1998 2.693069 AGATTCACTCACTTTGCTCCG 58.307 47.619 0.00 0.00 0.00 4.63
1778 1999 4.390297 GTGTAGATTCACTCACTTTGCTCC 59.610 45.833 0.00 0.00 35.68 4.70
1779 2000 5.233988 AGTGTAGATTCACTCACTTTGCTC 58.766 41.667 0.00 0.00 44.07 4.26
1780 2001 5.220710 AGTGTAGATTCACTCACTTTGCT 57.779 39.130 0.00 0.00 44.07 3.91
1840 2061 9.901172 ACTCCTTCCGTTTCTAAATATATGTTT 57.099 29.630 2.82 2.82 0.00 2.83
1843 2064 9.141400 GCTACTCCTTCCGTTTCTAAATATATG 57.859 37.037 0.00 0.00 0.00 1.78
1844 2065 9.091220 AGCTACTCCTTCCGTTTCTAAATATAT 57.909 33.333 0.00 0.00 0.00 0.86
1845 2066 8.474710 AGCTACTCCTTCCGTTTCTAAATATA 57.525 34.615 0.00 0.00 0.00 0.86
1846 2067 7.069578 TGAGCTACTCCTTCCGTTTCTAAATAT 59.930 37.037 0.00 0.00 0.00 1.28
1847 2068 6.379133 TGAGCTACTCCTTCCGTTTCTAAATA 59.621 38.462 0.00 0.00 0.00 1.40
1848 2069 5.187186 TGAGCTACTCCTTCCGTTTCTAAAT 59.813 40.000 0.00 0.00 0.00 1.40
1849 2070 4.525487 TGAGCTACTCCTTCCGTTTCTAAA 59.475 41.667 0.00 0.00 0.00 1.85
1850 2071 4.084287 TGAGCTACTCCTTCCGTTTCTAA 58.916 43.478 0.00 0.00 0.00 2.10
1851 2072 3.693807 TGAGCTACTCCTTCCGTTTCTA 58.306 45.455 0.00 0.00 0.00 2.10
1852 2073 2.526432 TGAGCTACTCCTTCCGTTTCT 58.474 47.619 0.00 0.00 0.00 2.52
1853 2074 3.528597 ATGAGCTACTCCTTCCGTTTC 57.471 47.619 0.00 0.00 0.00 2.78
1854 2075 3.600388 CAATGAGCTACTCCTTCCGTTT 58.400 45.455 0.00 0.00 0.00 3.60
1855 2076 2.678190 GCAATGAGCTACTCCTTCCGTT 60.678 50.000 0.00 0.00 41.15 4.44
1856 2077 1.134670 GCAATGAGCTACTCCTTCCGT 60.135 52.381 0.00 0.00 41.15 4.69
1857 2078 1.134699 TGCAATGAGCTACTCCTTCCG 60.135 52.381 0.00 0.00 45.94 4.30
1858 2079 2.284190 GTGCAATGAGCTACTCCTTCC 58.716 52.381 0.00 0.00 45.94 3.46
1859 2080 1.929836 CGTGCAATGAGCTACTCCTTC 59.070 52.381 0.00 0.00 45.94 3.46
1860 2081 1.276421 ACGTGCAATGAGCTACTCCTT 59.724 47.619 0.00 0.00 45.94 3.36
1861 2082 0.898320 ACGTGCAATGAGCTACTCCT 59.102 50.000 0.00 0.00 45.94 3.69
1862 2083 1.281899 GACGTGCAATGAGCTACTCC 58.718 55.000 0.00 0.00 45.94 3.85
1863 2084 1.996292 TGACGTGCAATGAGCTACTC 58.004 50.000 0.00 0.00 45.94 2.59
1864 2085 2.455674 TTGACGTGCAATGAGCTACT 57.544 45.000 0.00 0.00 45.94 2.57
1865 2086 3.747099 ATTTGACGTGCAATGAGCTAC 57.253 42.857 0.00 0.00 45.94 3.58
1899 2120 7.172703 ACAAGCCAACAAAGTAGTACTATTCAC 59.827 37.037 5.75 0.00 0.00 3.18
1900 2121 7.221450 ACAAGCCAACAAAGTAGTACTATTCA 58.779 34.615 5.75 0.00 0.00 2.57
1901 2122 7.668525 ACAAGCCAACAAAGTAGTACTATTC 57.331 36.000 5.75 0.00 0.00 1.75
1902 2123 7.717875 TCAACAAGCCAACAAAGTAGTACTATT 59.282 33.333 5.75 0.00 0.00 1.73
1903 2124 7.221450 TCAACAAGCCAACAAAGTAGTACTAT 58.779 34.615 5.75 0.00 0.00 2.12
1904 2125 6.584488 TCAACAAGCCAACAAAGTAGTACTA 58.416 36.000 2.50 0.00 0.00 1.82
1905 2126 5.433526 TCAACAAGCCAACAAAGTAGTACT 58.566 37.500 0.00 0.00 0.00 2.73
1906 2127 5.744666 TCAACAAGCCAACAAAGTAGTAC 57.255 39.130 0.00 0.00 0.00 2.73
1907 2128 8.100791 AGATATCAACAAGCCAACAAAGTAGTA 58.899 33.333 5.32 0.00 0.00 1.82
1908 2129 6.942576 AGATATCAACAAGCCAACAAAGTAGT 59.057 34.615 5.32 0.00 0.00 2.73
1909 2130 7.383102 AGATATCAACAAGCCAACAAAGTAG 57.617 36.000 5.32 0.00 0.00 2.57
1971 2194 3.530910 AAGGACCCACGGAGCAACG 62.531 63.158 0.00 0.00 40.31 4.10
1972 2195 0.822121 AAAAGGACCCACGGAGCAAC 60.822 55.000 0.00 0.00 0.00 4.17
2215 2447 2.736144 TGCGAGTCCGTGTTCTAATT 57.264 45.000 0.00 0.00 38.24 1.40
2222 2454 0.670546 CCAGATTTGCGAGTCCGTGT 60.671 55.000 0.00 0.00 38.24 4.49
2225 2457 2.464459 GGCCAGATTTGCGAGTCCG 61.464 63.158 0.00 0.00 39.16 4.79
2226 2458 2.115291 GGGCCAGATTTGCGAGTCC 61.115 63.158 4.39 0.00 0.00 3.85
2227 2459 2.464459 CGGGCCAGATTTGCGAGTC 61.464 63.158 4.39 0.00 0.00 3.36
2228 2460 2.436646 CGGGCCAGATTTGCGAGT 60.437 61.111 4.39 0.00 0.00 4.18
2229 2461 3.880846 GCGGGCCAGATTTGCGAG 61.881 66.667 7.23 0.00 0.00 5.03
2230 2462 4.713735 TGCGGGCCAGATTTGCGA 62.714 61.111 7.23 0.00 0.00 5.10
2231 2463 4.183686 CTGCGGGCCAGATTTGCG 62.184 66.667 7.23 0.00 44.64 4.85
2232 2464 2.751436 TCTGCGGGCCAGATTTGC 60.751 61.111 7.23 0.00 45.44 3.68
2245 2477 4.152625 GCGTCCACATGCGTCTGC 62.153 66.667 0.00 0.00 43.20 4.26
2261 2493 1.299926 AATCAGTATCCGCGGACGC 60.300 57.895 33.75 25.34 38.22 5.19
2262 2494 0.939577 CCAATCAGTATCCGCGGACG 60.940 60.000 33.75 19.28 39.67 4.79
2263 2495 0.387929 TCCAATCAGTATCCGCGGAC 59.612 55.000 33.75 20.38 0.00 4.79
2264 2496 0.387929 GTCCAATCAGTATCCGCGGA 59.612 55.000 33.12 33.12 0.00 5.54
2265 2497 0.104120 TGTCCAATCAGTATCCGCGG 59.896 55.000 22.12 22.12 0.00 6.46
2266 2498 1.209128 GTGTCCAATCAGTATCCGCG 58.791 55.000 0.00 0.00 0.00 6.46
2267 2499 1.139058 AGGTGTCCAATCAGTATCCGC 59.861 52.381 0.00 0.00 0.00 5.54
2268 2500 2.695666 AGAGGTGTCCAATCAGTATCCG 59.304 50.000 0.00 0.00 0.00 4.18
2269 2501 3.706594 TGAGAGGTGTCCAATCAGTATCC 59.293 47.826 0.00 0.00 0.00 2.59
2270 2502 5.344743 TTGAGAGGTGTCCAATCAGTATC 57.655 43.478 0.00 0.00 0.00 2.24
2271 2503 5.762179 TTTGAGAGGTGTCCAATCAGTAT 57.238 39.130 0.00 0.00 0.00 2.12
2272 2504 5.762179 ATTTGAGAGGTGTCCAATCAGTA 57.238 39.130 0.00 0.00 0.00 2.74
2273 2505 4.647564 ATTTGAGAGGTGTCCAATCAGT 57.352 40.909 0.00 0.00 0.00 3.41
2274 2506 5.464722 CGATATTTGAGAGGTGTCCAATCAG 59.535 44.000 0.00 0.00 0.00 2.90
2275 2507 5.359756 CGATATTTGAGAGGTGTCCAATCA 58.640 41.667 0.00 0.00 0.00 2.57
2276 2508 4.212214 GCGATATTTGAGAGGTGTCCAATC 59.788 45.833 0.00 0.00 0.00 2.67
2277 2509 4.130118 GCGATATTTGAGAGGTGTCCAAT 58.870 43.478 0.00 0.00 0.00 3.16
2278 2510 3.531538 GCGATATTTGAGAGGTGTCCAA 58.468 45.455 0.00 0.00 0.00 3.53
2279 2511 2.158957 GGCGATATTTGAGAGGTGTCCA 60.159 50.000 0.00 0.00 0.00 4.02
2280 2512 2.103263 AGGCGATATTTGAGAGGTGTCC 59.897 50.000 0.00 0.00 0.00 4.02
2281 2513 3.181475 TGAGGCGATATTTGAGAGGTGTC 60.181 47.826 0.00 0.00 0.00 3.67
2282 2514 2.766263 TGAGGCGATATTTGAGAGGTGT 59.234 45.455 0.00 0.00 0.00 4.16
2283 2515 3.126831 GTGAGGCGATATTTGAGAGGTG 58.873 50.000 0.00 0.00 0.00 4.00
2284 2516 2.766263 TGTGAGGCGATATTTGAGAGGT 59.234 45.455 0.00 0.00 0.00 3.85
2285 2517 3.126831 GTGTGAGGCGATATTTGAGAGG 58.873 50.000 0.00 0.00 0.00 3.69
2286 2518 3.785486 TGTGTGAGGCGATATTTGAGAG 58.215 45.455 0.00 0.00 0.00 3.20
2287 2519 3.885724 TGTGTGAGGCGATATTTGAGA 57.114 42.857 0.00 0.00 0.00 3.27
2288 2520 5.490139 AAATGTGTGAGGCGATATTTGAG 57.510 39.130 0.00 0.00 0.00 3.02
2289 2521 5.877564 TGTAAATGTGTGAGGCGATATTTGA 59.122 36.000 0.00 0.00 0.00 2.69
2290 2522 6.117911 TGTAAATGTGTGAGGCGATATTTG 57.882 37.500 0.00 0.00 0.00 2.32
2291 2523 6.942532 ATGTAAATGTGTGAGGCGATATTT 57.057 33.333 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.