Multiple sequence alignment - TraesCS2A01G404100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G404100 | chr2A | 100.000 | 3410 | 0 | 0 | 1 | 3410 | 659652525 | 659649116 | 0.000000e+00 | 6298.0 |
1 | TraesCS2A01G404100 | chr2D | 94.102 | 1916 | 71 | 18 | 751 | 2649 | 515829362 | 515827472 | 0.000000e+00 | 2874.0 |
2 | TraesCS2A01G404100 | chr2D | 91.494 | 482 | 28 | 4 | 2941 | 3410 | 515827086 | 515826606 | 0.000000e+00 | 651.0 |
3 | TraesCS2A01G404100 | chr2D | 86.141 | 368 | 35 | 7 | 1 | 360 | 515830860 | 515830501 | 1.920000e-102 | 383.0 |
4 | TraesCS2A01G404100 | chr2D | 86.957 | 276 | 22 | 4 | 2641 | 2909 | 515827443 | 515827175 | 7.150000e-77 | 298.0 |
5 | TraesCS2A01G404100 | chr2D | 100.000 | 30 | 0 | 0 | 417 | 446 | 515829832 | 515829803 | 4.750000e-04 | 56.5 |
6 | TraesCS2A01G404100 | chr2B | 92.268 | 1927 | 82 | 20 | 755 | 2649 | 607248306 | 607246415 | 0.000000e+00 | 2671.0 |
7 | TraesCS2A01G404100 | chr2B | 94.190 | 327 | 12 | 3 | 3088 | 3410 | 607245709 | 607245386 | 3.060000e-135 | 492.0 |
8 | TraesCS2A01G404100 | chr2B | 87.772 | 368 | 36 | 2 | 1 | 360 | 607319487 | 607319121 | 4.070000e-114 | 422.0 |
9 | TraesCS2A01G404100 | chr2B | 84.868 | 304 | 24 | 14 | 2809 | 3096 | 607246144 | 607245847 | 1.550000e-73 | 287.0 |
10 | TraesCS2A01G404100 | chr6A | 80.620 | 258 | 40 | 5 | 454 | 702 | 466481431 | 466481687 | 1.250000e-44 | 191.0 |
11 | TraesCS2A01G404100 | chr5A | 78.472 | 288 | 46 | 11 | 450 | 725 | 458978769 | 458979052 | 1.260000e-39 | 174.0 |
12 | TraesCS2A01G404100 | chr7D | 78.967 | 271 | 40 | 15 | 456 | 715 | 116789370 | 116789634 | 5.850000e-38 | 169.0 |
13 | TraesCS2A01G404100 | chr3A | 81.193 | 218 | 32 | 8 | 454 | 664 | 638465550 | 638465335 | 2.100000e-37 | 167.0 |
14 | TraesCS2A01G404100 | chr4D | 78.598 | 271 | 41 | 15 | 456 | 715 | 35687118 | 35687382 | 2.720000e-36 | 163.0 |
15 | TraesCS2A01G404100 | chr7B | 77.455 | 275 | 51 | 10 | 447 | 713 | 97925548 | 97925819 | 1.640000e-33 | 154.0 |
16 | TraesCS2A01G404100 | chr1D | 77.061 | 279 | 52 | 10 | 457 | 725 | 476225701 | 476225425 | 2.120000e-32 | 150.0 |
17 | TraesCS2A01G404100 | chr6B | 76.277 | 274 | 53 | 11 | 453 | 715 | 697660103 | 697659831 | 5.940000e-28 | 135.0 |
18 | TraesCS2A01G404100 | chr3D | 78.505 | 214 | 37 | 8 | 500 | 705 | 288101461 | 288101249 | 7.680000e-27 | 132.0 |
19 | TraesCS2A01G404100 | chr4B | 79.558 | 181 | 35 | 2 | 534 | 713 | 586585874 | 586585695 | 9.930000e-26 | 128.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G404100 | chr2A | 659649116 | 659652525 | 3409 | True | 6298.0 | 6298 | 100.0000 | 1 | 3410 | 1 | chr2A.!!$R1 | 3409 |
1 | TraesCS2A01G404100 | chr2D | 515826606 | 515830860 | 4254 | True | 852.5 | 2874 | 91.7388 | 1 | 3410 | 5 | chr2D.!!$R1 | 3409 |
2 | TraesCS2A01G404100 | chr2B | 607245386 | 607248306 | 2920 | True | 1150.0 | 2671 | 90.4420 | 755 | 3410 | 3 | chr2B.!!$R2 | 2655 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
529 | 1540 | 0.036765 | TCCTATGAACGCACACACCC | 60.037 | 55.0 | 0.0 | 0.0 | 0.0 | 4.61 | F |
532 | 1543 | 0.106894 | TATGAACGCACACACCCACA | 59.893 | 50.0 | 0.0 | 0.0 | 0.0 | 4.17 | F |
564 | 1575 | 0.179004 | ATCCGAGAGACTGAGCCGAT | 60.179 | 55.0 | 0.0 | 0.0 | 0.0 | 4.18 | F |
603 | 1614 | 0.243095 | AGAAGTCACCGTAACGCCTC | 59.757 | 55.0 | 0.0 | 0.0 | 0.0 | 4.70 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1874 | 2915 | 1.174078 | TGTAACGGAGACTGACGGCA | 61.174 | 55.000 | 0.00 | 0.0 | 0.00 | 5.69 | R |
2238 | 3281 | 1.279271 | GTCTTGGCCTTCTTGGAGCTA | 59.721 | 52.381 | 3.32 | 0.0 | 38.35 | 3.32 | R |
2391 | 3441 | 2.599408 | TTTACTCCTCGTCCTCCTGT | 57.401 | 50.000 | 0.00 | 0.0 | 0.00 | 4.00 | R |
2432 | 3482 | 3.566273 | CAAACGCTGATTTGCACCA | 57.434 | 47.368 | 0.00 | 0.0 | 33.07 | 4.17 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 0.178891 | TTGAGCTCCTCAACCCCTCT | 60.179 | 55.000 | 12.15 | 0.00 | 44.27 | 3.69 |
27 | 28 | 1.691434 | CTCCTCAACCCCTCTAGCATC | 59.309 | 57.143 | 0.00 | 0.00 | 0.00 | 3.91 |
28 | 29 | 1.008327 | TCCTCAACCCCTCTAGCATCA | 59.992 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
30 | 31 | 2.392662 | CTCAACCCCTCTAGCATCAGA | 58.607 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
34 | 35 | 0.968405 | CCCCTCTAGCATCAGAGCTC | 59.032 | 60.000 | 5.27 | 5.27 | 45.26 | 4.09 |
42 | 43 | 2.172372 | CATCAGAGCTCACGCCTGC | 61.172 | 63.158 | 17.77 | 0.00 | 35.63 | 4.85 |
61 | 62 | 2.575461 | GTAAGACCCACCGACCGG | 59.425 | 66.667 | 6.94 | 6.94 | 42.03 | 5.28 |
69 | 70 | 3.803082 | CACCGACCGGCATTGCTG | 61.803 | 66.667 | 10.65 | 10.65 | 39.32 | 4.41 |
79 | 80 | 3.539253 | GCATTGCTGCTAACCATCG | 57.461 | 52.632 | 0.16 | 0.00 | 45.32 | 3.84 |
81 | 82 | 1.268234 | GCATTGCTGCTAACCATCGTC | 60.268 | 52.381 | 0.16 | 0.00 | 45.32 | 4.20 |
124 | 125 | 1.180029 | GATGCCATGCCAACTCACTT | 58.820 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
125 | 126 | 1.547372 | GATGCCATGCCAACTCACTTT | 59.453 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
128 | 129 | 2.754552 | TGCCATGCCAACTCACTTTATC | 59.245 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
145 | 146 | 0.669077 | ATCGCCATGTCCTAGTCGTC | 59.331 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
159 | 160 | 1.069378 | GTCGTCGTCGTTGATGGTCC | 61.069 | 60.000 | 1.33 | 0.00 | 38.33 | 4.46 |
186 | 187 | 1.918800 | CTCCCCCAACGTTCCCTCT | 60.919 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
194 | 195 | 2.614734 | CCAACGTTCCCTCTAAACTCCC | 60.615 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
199 | 200 | 2.767394 | GTTCCCTCTAAACTCCCTCCTC | 59.233 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
201 | 202 | 1.008449 | CCCTCTAAACTCCCTCCTCCA | 59.992 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
227 | 236 | 4.654724 | AGCATCCCTAACCCTAACTTAGTC | 59.345 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
235 | 244 | 5.803237 | AACCCTAACTTAGTCATATCCGG | 57.197 | 43.478 | 0.00 | 0.00 | 0.00 | 5.14 |
242 | 251 | 6.479972 | AACTTAGTCATATCCGGTTCATCA | 57.520 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
256 | 265 | 2.607750 | ATCACCGGTGCCTCCACT | 60.608 | 61.111 | 30.25 | 4.96 | 41.75 | 4.00 |
259 | 268 | 4.954118 | ACCGGTGCCTCCACTCCA | 62.954 | 66.667 | 6.12 | 0.00 | 41.75 | 3.86 |
261 | 270 | 4.394712 | CGGTGCCTCCACTCCACC | 62.395 | 72.222 | 0.00 | 0.00 | 44.28 | 4.61 |
262 | 271 | 2.930562 | GGTGCCTCCACTCCACCT | 60.931 | 66.667 | 1.99 | 0.00 | 44.32 | 4.00 |
263 | 272 | 2.665603 | GTGCCTCCACTCCACCTC | 59.334 | 66.667 | 0.00 | 0.00 | 38.93 | 3.85 |
264 | 273 | 2.997315 | TGCCTCCACTCCACCTCG | 60.997 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
265 | 274 | 4.459089 | GCCTCCACTCCACCTCGC | 62.459 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
267 | 276 | 2.716017 | CCTCCACTCCACCTCGCTC | 61.716 | 68.421 | 0.00 | 0.00 | 0.00 | 5.03 |
268 | 277 | 3.057547 | CTCCACTCCACCTCGCTCG | 62.058 | 68.421 | 0.00 | 0.00 | 0.00 | 5.03 |
269 | 278 | 4.803426 | CCACTCCACCTCGCTCGC | 62.803 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
356 | 365 | 1.758592 | GGTACCCACAGCCAGTCAA | 59.241 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
360 | 369 | 2.086610 | ACCCACAGCCAGTCAATTTT | 57.913 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
361 | 370 | 2.397597 | ACCCACAGCCAGTCAATTTTT | 58.602 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
405 | 414 | 0.879400 | CAAGATAGCCAGCCAGCTCG | 60.879 | 60.000 | 0.57 | 0.00 | 43.67 | 5.03 |
446 | 1084 | 3.541713 | GGGCTGCTCCTACTCGGG | 61.542 | 72.222 | 0.00 | 0.00 | 34.39 | 5.14 |
452 | 1463 | 1.275291 | CTGCTCCTACTCGGGACAAAA | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
453 | 1464 | 1.906574 | TGCTCCTACTCGGGACAAAAT | 59.093 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
457 | 1468 | 4.833390 | CTCCTACTCGGGACAAAATCTTT | 58.167 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
459 | 1470 | 5.627135 | TCCTACTCGGGACAAAATCTTTTT | 58.373 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
483 | 1494 | 4.933330 | TGAAGATCAGTACGGATACAAGC | 58.067 | 43.478 | 8.57 | 0.00 | 33.30 | 4.01 |
484 | 1495 | 3.627732 | AGATCAGTACGGATACAAGCG | 57.372 | 47.619 | 8.57 | 0.00 | 33.30 | 4.68 |
485 | 1496 | 2.052157 | GATCAGTACGGATACAAGCGC | 58.948 | 52.381 | 8.57 | 0.00 | 33.30 | 5.92 |
487 | 1498 | 1.065102 | TCAGTACGGATACAAGCGCTC | 59.935 | 52.381 | 12.06 | 0.00 | 33.30 | 5.03 |
488 | 1499 | 1.100510 | AGTACGGATACAAGCGCTCA | 58.899 | 50.000 | 12.06 | 0.00 | 33.30 | 4.26 |
489 | 1500 | 1.681793 | AGTACGGATACAAGCGCTCAT | 59.318 | 47.619 | 12.06 | 4.31 | 33.30 | 2.90 |
490 | 1501 | 2.882761 | AGTACGGATACAAGCGCTCATA | 59.117 | 45.455 | 12.06 | 6.73 | 33.30 | 2.15 |
492 | 1503 | 4.698780 | AGTACGGATACAAGCGCTCATATA | 59.301 | 41.667 | 12.06 | 0.81 | 33.30 | 0.86 |
494 | 1505 | 5.830000 | ACGGATACAAGCGCTCATATATA | 57.170 | 39.130 | 12.06 | 0.00 | 0.00 | 0.86 |
495 | 1506 | 6.392625 | ACGGATACAAGCGCTCATATATAT | 57.607 | 37.500 | 12.06 | 2.49 | 0.00 | 0.86 |
496 | 1507 | 6.209361 | ACGGATACAAGCGCTCATATATATG | 58.791 | 40.000 | 12.06 | 15.47 | 35.04 | 1.78 |
497 | 1508 | 5.117745 | CGGATACAAGCGCTCATATATATGC | 59.882 | 44.000 | 12.06 | 7.12 | 33.76 | 3.14 |
513 | 1524 | 2.435586 | GCGCATGCACTCACTCCT | 60.436 | 61.111 | 19.57 | 0.00 | 42.15 | 3.69 |
514 | 1525 | 1.153568 | GCGCATGCACTCACTCCTA | 60.154 | 57.895 | 19.57 | 0.00 | 42.15 | 2.94 |
515 | 1526 | 0.531532 | GCGCATGCACTCACTCCTAT | 60.532 | 55.000 | 19.57 | 0.00 | 42.15 | 2.57 |
516 | 1527 | 1.215244 | CGCATGCACTCACTCCTATG | 58.785 | 55.000 | 19.57 | 0.00 | 0.00 | 2.23 |
517 | 1528 | 1.202452 | CGCATGCACTCACTCCTATGA | 60.202 | 52.381 | 19.57 | 0.00 | 0.00 | 2.15 |
518 | 1529 | 2.739609 | CGCATGCACTCACTCCTATGAA | 60.740 | 50.000 | 19.57 | 0.00 | 0.00 | 2.57 |
519 | 1530 | 2.611292 | GCATGCACTCACTCCTATGAAC | 59.389 | 50.000 | 14.21 | 0.00 | 0.00 | 3.18 |
520 | 1531 | 2.654749 | TGCACTCACTCCTATGAACG | 57.345 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
521 | 1532 | 1.281899 | GCACTCACTCCTATGAACGC | 58.718 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
522 | 1533 | 1.404181 | GCACTCACTCCTATGAACGCA | 60.404 | 52.381 | 0.00 | 0.00 | 0.00 | 5.24 |
523 | 1534 | 2.263077 | CACTCACTCCTATGAACGCAC | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
524 | 1535 | 1.893137 | ACTCACTCCTATGAACGCACA | 59.107 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
525 | 1536 | 2.263077 | CTCACTCCTATGAACGCACAC | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
526 | 1537 | 1.616374 | TCACTCCTATGAACGCACACA | 59.384 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
527 | 1538 | 1.726791 | CACTCCTATGAACGCACACAC | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
528 | 1539 | 1.337823 | ACTCCTATGAACGCACACACC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
529 | 1540 | 0.036765 | TCCTATGAACGCACACACCC | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
530 | 1541 | 0.321210 | CCTATGAACGCACACACCCA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
531 | 1542 | 0.796312 | CTATGAACGCACACACCCAC | 59.204 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
532 | 1543 | 0.106894 | TATGAACGCACACACCCACA | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
533 | 1544 | 1.444119 | ATGAACGCACACACCCACAC | 61.444 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
534 | 1545 | 2.826738 | AACGCACACACCCACACC | 60.827 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
535 | 1546 | 4.868116 | ACGCACACACCCACACCC | 62.868 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
536 | 1547 | 4.562425 | CGCACACACCCACACCCT | 62.562 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
537 | 1548 | 2.833227 | GCACACACCCACACCCTA | 59.167 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
538 | 1549 | 1.378762 | GCACACACCCACACCCTAT | 59.621 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
539 | 1550 | 0.960364 | GCACACACCCACACCCTATG | 60.960 | 60.000 | 0.00 | 0.00 | 0.00 | 2.23 |
540 | 1551 | 0.690192 | CACACACCCACACCCTATGA | 59.310 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
541 | 1552 | 0.984230 | ACACACCCACACCCTATGAG | 59.016 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
542 | 1553 | 0.392998 | CACACCCACACCCTATGAGC | 60.393 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
543 | 1554 | 0.840288 | ACACCCACACCCTATGAGCA | 60.840 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
544 | 1555 | 0.548031 | CACCCACACCCTATGAGCAT | 59.452 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
545 | 1556 | 1.768275 | CACCCACACCCTATGAGCATA | 59.232 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
546 | 1557 | 2.373169 | CACCCACACCCTATGAGCATAT | 59.627 | 50.000 | 0.00 | 0.00 | 0.00 | 1.78 |
547 | 1558 | 2.639839 | ACCCACACCCTATGAGCATATC | 59.360 | 50.000 | 0.00 | 0.00 | 0.00 | 1.63 |
548 | 1559 | 2.026822 | CCCACACCCTATGAGCATATCC | 60.027 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
549 | 1560 | 2.354103 | CCACACCCTATGAGCATATCCG | 60.354 | 54.545 | 0.00 | 0.00 | 0.00 | 4.18 |
550 | 1561 | 2.562738 | CACACCCTATGAGCATATCCGA | 59.437 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
551 | 1562 | 2.828520 | ACACCCTATGAGCATATCCGAG | 59.171 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
552 | 1563 | 3.092301 | CACCCTATGAGCATATCCGAGA | 58.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
553 | 1564 | 3.130164 | CACCCTATGAGCATATCCGAGAG | 59.870 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
554 | 1565 | 3.010696 | ACCCTATGAGCATATCCGAGAGA | 59.989 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
555 | 1566 | 3.380004 | CCCTATGAGCATATCCGAGAGAC | 59.620 | 52.174 | 0.00 | 0.00 | 0.00 | 3.36 |
556 | 1567 | 4.269183 | CCTATGAGCATATCCGAGAGACT | 58.731 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
557 | 1568 | 4.096231 | CCTATGAGCATATCCGAGAGACTG | 59.904 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
558 | 1569 | 3.214696 | TGAGCATATCCGAGAGACTGA | 57.785 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
559 | 1570 | 3.145286 | TGAGCATATCCGAGAGACTGAG | 58.855 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
560 | 1571 | 1.885887 | AGCATATCCGAGAGACTGAGC | 59.114 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
561 | 1572 | 1.067915 | GCATATCCGAGAGACTGAGCC | 60.068 | 57.143 | 0.00 | 0.00 | 0.00 | 4.70 |
562 | 1573 | 1.198867 | CATATCCGAGAGACTGAGCCG | 59.801 | 57.143 | 0.00 | 0.00 | 0.00 | 5.52 |
563 | 1574 | 0.468648 | TATCCGAGAGACTGAGCCGA | 59.531 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
564 | 1575 | 0.179004 | ATCCGAGAGACTGAGCCGAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
565 | 1576 | 0.468648 | TCCGAGAGACTGAGCCGATA | 59.531 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
566 | 1577 | 1.072489 | TCCGAGAGACTGAGCCGATAT | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 1.63 |
567 | 1578 | 2.302157 | TCCGAGAGACTGAGCCGATATA | 59.698 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
568 | 1579 | 3.055021 | TCCGAGAGACTGAGCCGATATAT | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 0.86 |
569 | 1580 | 3.311322 | CCGAGAGACTGAGCCGATATATC | 59.689 | 52.174 | 2.34 | 2.34 | 0.00 | 1.63 |
570 | 1581 | 3.935828 | CGAGAGACTGAGCCGATATATCA | 59.064 | 47.826 | 13.11 | 0.00 | 0.00 | 2.15 |
571 | 1582 | 4.574421 | CGAGAGACTGAGCCGATATATCAT | 59.426 | 45.833 | 13.11 | 0.00 | 0.00 | 2.45 |
572 | 1583 | 5.277297 | CGAGAGACTGAGCCGATATATCATC | 60.277 | 48.000 | 13.11 | 7.83 | 0.00 | 2.92 |
573 | 1584 | 5.754782 | AGAGACTGAGCCGATATATCATCT | 58.245 | 41.667 | 13.11 | 8.24 | 0.00 | 2.90 |
574 | 1585 | 6.186957 | AGAGACTGAGCCGATATATCATCTT | 58.813 | 40.000 | 13.11 | 0.00 | 0.00 | 2.40 |
575 | 1586 | 6.095300 | AGAGACTGAGCCGATATATCATCTTG | 59.905 | 42.308 | 13.11 | 8.01 | 0.00 | 3.02 |
576 | 1587 | 5.948758 | AGACTGAGCCGATATATCATCTTGA | 59.051 | 40.000 | 13.11 | 0.47 | 0.00 | 3.02 |
577 | 1588 | 6.095300 | AGACTGAGCCGATATATCATCTTGAG | 59.905 | 42.308 | 13.11 | 10.07 | 0.00 | 3.02 |
578 | 1589 | 5.948758 | ACTGAGCCGATATATCATCTTGAGA | 59.051 | 40.000 | 13.11 | 0.00 | 0.00 | 3.27 |
579 | 1590 | 6.606796 | ACTGAGCCGATATATCATCTTGAGAT | 59.393 | 38.462 | 13.11 | 0.00 | 32.49 | 2.75 |
580 | 1591 | 7.123997 | ACTGAGCCGATATATCATCTTGAGATT | 59.876 | 37.037 | 13.11 | 0.00 | 30.15 | 2.40 |
581 | 1592 | 7.845037 | TGAGCCGATATATCATCTTGAGATTT | 58.155 | 34.615 | 13.11 | 0.00 | 30.15 | 2.17 |
582 | 1593 | 8.316946 | TGAGCCGATATATCATCTTGAGATTTT | 58.683 | 33.333 | 13.11 | 0.00 | 30.15 | 1.82 |
583 | 1594 | 9.809096 | GAGCCGATATATCATCTTGAGATTTTA | 57.191 | 33.333 | 13.11 | 0.00 | 30.15 | 1.52 |
593 | 1604 | 8.553459 | TCATCTTGAGATTTTAAGAAGTCACC | 57.447 | 34.615 | 0.00 | 0.00 | 36.59 | 4.02 |
594 | 1605 | 7.331934 | TCATCTTGAGATTTTAAGAAGTCACCG | 59.668 | 37.037 | 0.00 | 0.00 | 36.59 | 4.94 |
595 | 1606 | 6.522054 | TCTTGAGATTTTAAGAAGTCACCGT | 58.478 | 36.000 | 0.00 | 0.00 | 30.49 | 4.83 |
596 | 1607 | 7.663827 | TCTTGAGATTTTAAGAAGTCACCGTA | 58.336 | 34.615 | 0.00 | 0.00 | 30.49 | 4.02 |
597 | 1608 | 8.145767 | TCTTGAGATTTTAAGAAGTCACCGTAA | 58.854 | 33.333 | 0.00 | 0.00 | 30.49 | 3.18 |
598 | 1609 | 7.647907 | TGAGATTTTAAGAAGTCACCGTAAC | 57.352 | 36.000 | 0.00 | 0.00 | 0.00 | 2.50 |
599 | 1610 | 6.364165 | TGAGATTTTAAGAAGTCACCGTAACG | 59.636 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
600 | 1611 | 4.713854 | TTTTAAGAAGTCACCGTAACGC | 57.286 | 40.909 | 0.00 | 0.00 | 0.00 | 4.84 |
601 | 1612 | 2.352503 | TAAGAAGTCACCGTAACGCC | 57.647 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
602 | 1613 | 0.677842 | AAGAAGTCACCGTAACGCCT | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
603 | 1614 | 0.243095 | AGAAGTCACCGTAACGCCTC | 59.757 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
604 | 1615 | 1.069378 | GAAGTCACCGTAACGCCTCG | 61.069 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
605 | 1616 | 1.799258 | AAGTCACCGTAACGCCTCGT | 61.799 | 55.000 | 0.00 | 0.00 | 43.97 | 4.18 |
606 | 1617 | 0.955428 | AGTCACCGTAACGCCTCGTA | 60.955 | 55.000 | 0.00 | 0.00 | 39.99 | 3.43 |
607 | 1618 | 0.522076 | GTCACCGTAACGCCTCGTAG | 60.522 | 60.000 | 0.00 | 0.00 | 39.99 | 3.51 |
608 | 1619 | 0.955428 | TCACCGTAACGCCTCGTAGT | 60.955 | 55.000 | 0.00 | 0.00 | 39.99 | 2.73 |
609 | 1620 | 0.522076 | CACCGTAACGCCTCGTAGTC | 60.522 | 60.000 | 0.00 | 0.00 | 39.99 | 2.59 |
610 | 1621 | 1.297158 | CCGTAACGCCTCGTAGTCG | 60.297 | 63.158 | 0.00 | 0.00 | 39.99 | 4.18 |
611 | 1622 | 1.695893 | CCGTAACGCCTCGTAGTCGA | 61.696 | 60.000 | 10.37 | 0.00 | 39.99 | 4.20 |
612 | 1623 | 0.585029 | CGTAACGCCTCGTAGTCGAC | 60.585 | 60.000 | 7.70 | 7.70 | 39.99 | 4.20 |
624 | 1635 | 3.388149 | GTAGTCGACGAGAACCTCTTC | 57.612 | 52.381 | 10.46 | 0.00 | 0.00 | 2.87 |
625 | 1636 | 2.188062 | AGTCGACGAGAACCTCTTCT | 57.812 | 50.000 | 10.46 | 0.00 | 39.64 | 2.85 |
626 | 1637 | 2.506444 | AGTCGACGAGAACCTCTTCTT | 58.494 | 47.619 | 10.46 | 0.00 | 36.82 | 2.52 |
627 | 1638 | 2.885894 | AGTCGACGAGAACCTCTTCTTT | 59.114 | 45.455 | 10.46 | 0.00 | 36.82 | 2.52 |
628 | 1639 | 3.058085 | AGTCGACGAGAACCTCTTCTTTC | 60.058 | 47.826 | 10.46 | 0.00 | 36.82 | 2.62 |
629 | 1640 | 2.882761 | TCGACGAGAACCTCTTCTTTCA | 59.117 | 45.455 | 0.00 | 0.00 | 36.82 | 2.69 |
630 | 1641 | 3.506455 | TCGACGAGAACCTCTTCTTTCAT | 59.494 | 43.478 | 0.00 | 0.00 | 36.82 | 2.57 |
631 | 1642 | 4.022242 | TCGACGAGAACCTCTTCTTTCATT | 60.022 | 41.667 | 0.00 | 0.00 | 36.82 | 2.57 |
632 | 1643 | 4.090642 | CGACGAGAACCTCTTCTTTCATTG | 59.909 | 45.833 | 0.00 | 0.00 | 36.82 | 2.82 |
633 | 1644 | 5.215252 | ACGAGAACCTCTTCTTTCATTGA | 57.785 | 39.130 | 0.00 | 0.00 | 36.82 | 2.57 |
634 | 1645 | 5.611374 | ACGAGAACCTCTTCTTTCATTGAA | 58.389 | 37.500 | 0.00 | 0.00 | 36.82 | 2.69 |
635 | 1646 | 5.467063 | ACGAGAACCTCTTCTTTCATTGAAC | 59.533 | 40.000 | 0.00 | 0.00 | 36.82 | 3.18 |
636 | 1647 | 5.466728 | CGAGAACCTCTTCTTTCATTGAACA | 59.533 | 40.000 | 0.00 | 0.00 | 36.82 | 3.18 |
637 | 1648 | 6.564873 | CGAGAACCTCTTCTTTCATTGAACAC | 60.565 | 42.308 | 0.00 | 0.00 | 36.82 | 3.32 |
638 | 1649 | 5.237344 | AGAACCTCTTCTTTCATTGAACACG | 59.763 | 40.000 | 0.00 | 0.00 | 32.29 | 4.49 |
639 | 1650 | 4.451900 | ACCTCTTCTTTCATTGAACACGT | 58.548 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
640 | 1651 | 5.607477 | ACCTCTTCTTTCATTGAACACGTA | 58.393 | 37.500 | 0.00 | 0.00 | 0.00 | 3.57 |
641 | 1652 | 6.231211 | ACCTCTTCTTTCATTGAACACGTAT | 58.769 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
642 | 1653 | 6.369065 | ACCTCTTCTTTCATTGAACACGTATC | 59.631 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
643 | 1654 | 6.368791 | CCTCTTCTTTCATTGAACACGTATCA | 59.631 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
644 | 1655 | 7.117241 | TCTTCTTTCATTGAACACGTATCAC | 57.883 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
645 | 1656 | 5.856126 | TCTTTCATTGAACACGTATCACC | 57.144 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
646 | 1657 | 4.387559 | TCTTTCATTGAACACGTATCACCG | 59.612 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
647 | 1658 | 3.579335 | TCATTGAACACGTATCACCGA | 57.421 | 42.857 | 2.93 | 1.11 | 0.00 | 4.69 |
648 | 1659 | 3.915536 | TCATTGAACACGTATCACCGAA | 58.084 | 40.909 | 2.93 | 0.00 | 0.00 | 4.30 |
649 | 1660 | 4.308265 | TCATTGAACACGTATCACCGAAA | 58.692 | 39.130 | 2.93 | 0.00 | 0.00 | 3.46 |
650 | 1661 | 4.750598 | TCATTGAACACGTATCACCGAAAA | 59.249 | 37.500 | 2.93 | 0.00 | 0.00 | 2.29 |
651 | 1662 | 5.410132 | TCATTGAACACGTATCACCGAAAAT | 59.590 | 36.000 | 2.93 | 0.00 | 0.00 | 1.82 |
652 | 1663 | 4.914312 | TGAACACGTATCACCGAAAATC | 57.086 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
653 | 1664 | 4.308265 | TGAACACGTATCACCGAAAATCA | 58.692 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
654 | 1665 | 4.932799 | TGAACACGTATCACCGAAAATCAT | 59.067 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
655 | 1666 | 4.857871 | ACACGTATCACCGAAAATCATG | 57.142 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
656 | 1667 | 4.500127 | ACACGTATCACCGAAAATCATGA | 58.500 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
657 | 1668 | 4.932799 | ACACGTATCACCGAAAATCATGAA | 59.067 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
658 | 1669 | 5.410132 | ACACGTATCACCGAAAATCATGAAA | 59.590 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
659 | 1670 | 6.093495 | ACACGTATCACCGAAAATCATGAAAT | 59.907 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
660 | 1671 | 7.279090 | ACACGTATCACCGAAAATCATGAAATA | 59.721 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
661 | 1672 | 7.793888 | CACGTATCACCGAAAATCATGAAATAG | 59.206 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
662 | 1673 | 7.709182 | ACGTATCACCGAAAATCATGAAATAGA | 59.291 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
663 | 1674 | 8.712363 | CGTATCACCGAAAATCATGAAATAGAT | 58.288 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
683 | 1694 | 9.669353 | AATAGATTTAAGATAAATGCAAGCACG | 57.331 | 29.630 | 0.00 | 0.00 | 0.00 | 5.34 |
684 | 1695 | 7.320443 | AGATTTAAGATAAATGCAAGCACGA | 57.680 | 32.000 | 0.00 | 0.00 | 0.00 | 4.35 |
685 | 1696 | 7.412853 | AGATTTAAGATAAATGCAAGCACGAG | 58.587 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
686 | 1697 | 5.484173 | TTAAGATAAATGCAAGCACGAGG | 57.516 | 39.130 | 0.00 | 0.00 | 0.00 | 4.63 |
687 | 1698 | 3.266510 | AGATAAATGCAAGCACGAGGA | 57.733 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
688 | 1699 | 2.939103 | AGATAAATGCAAGCACGAGGAC | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
689 | 1700 | 2.472695 | TAAATGCAAGCACGAGGACT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
690 | 1701 | 1.609208 | AAATGCAAGCACGAGGACTT | 58.391 | 45.000 | 0.00 | 0.00 | 0.00 | 3.01 |
691 | 1702 | 2.472695 | AATGCAAGCACGAGGACTTA | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 2.24 |
692 | 1703 | 2.472695 | ATGCAAGCACGAGGACTTAA | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 1.85 |
693 | 1704 | 2.248280 | TGCAAGCACGAGGACTTAAA | 57.752 | 45.000 | 0.00 | 0.00 | 0.00 | 1.52 |
694 | 1705 | 2.778299 | TGCAAGCACGAGGACTTAAAT | 58.222 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
695 | 1706 | 2.742053 | TGCAAGCACGAGGACTTAAATC | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
696 | 1707 | 2.096013 | GCAAGCACGAGGACTTAAATCC | 59.904 | 50.000 | 0.00 | 0.00 | 39.28 | 3.01 |
705 | 1716 | 2.587522 | GGACTTAAATCCTGATGGGCC | 58.412 | 52.381 | 0.00 | 0.00 | 35.68 | 5.80 |
706 | 1717 | 2.222027 | GACTTAAATCCTGATGGGCCG | 58.778 | 52.381 | 0.00 | 0.00 | 34.39 | 6.13 |
707 | 1718 | 1.133792 | ACTTAAATCCTGATGGGCCGG | 60.134 | 52.381 | 0.00 | 0.00 | 34.39 | 6.13 |
708 | 1719 | 1.142870 | CTTAAATCCTGATGGGCCGGA | 59.857 | 52.381 | 5.05 | 0.00 | 34.39 | 5.14 |
709 | 1720 | 1.217916 | TAAATCCTGATGGGCCGGAA | 58.782 | 50.000 | 5.05 | 0.00 | 34.39 | 4.30 |
710 | 1721 | 0.557729 | AAATCCTGATGGGCCGGAAT | 59.442 | 50.000 | 5.05 | 0.00 | 34.39 | 3.01 |
711 | 1722 | 1.444933 | AATCCTGATGGGCCGGAATA | 58.555 | 50.000 | 5.05 | 0.00 | 34.39 | 1.75 |
712 | 1723 | 0.693049 | ATCCTGATGGGCCGGAATAC | 59.307 | 55.000 | 5.05 | 0.00 | 34.39 | 1.89 |
713 | 1724 | 1.073199 | CCTGATGGGCCGGAATACC | 59.927 | 63.158 | 5.05 | 1.00 | 0.00 | 2.73 |
714 | 1725 | 1.705002 | CCTGATGGGCCGGAATACCA | 61.705 | 60.000 | 5.05 | 7.99 | 38.88 | 3.25 |
716 | 1727 | 0.850100 | TGATGGGCCGGAATACCATT | 59.150 | 50.000 | 17.70 | 5.96 | 44.62 | 3.16 |
717 | 1728 | 1.247567 | GATGGGCCGGAATACCATTG | 58.752 | 55.000 | 17.70 | 0.00 | 44.62 | 2.82 |
718 | 1729 | 0.827507 | ATGGGCCGGAATACCATTGC | 60.828 | 55.000 | 5.05 | 0.00 | 42.08 | 3.56 |
719 | 1730 | 2.200337 | GGGCCGGAATACCATTGCC | 61.200 | 63.158 | 5.05 | 0.00 | 41.36 | 4.52 |
720 | 1731 | 1.454847 | GGCCGGAATACCATTGCCA | 60.455 | 57.895 | 5.05 | 0.00 | 41.56 | 4.92 |
721 | 1732 | 0.827507 | GGCCGGAATACCATTGCCAT | 60.828 | 55.000 | 5.05 | 0.00 | 41.56 | 4.40 |
722 | 1733 | 0.598065 | GCCGGAATACCATTGCCATC | 59.402 | 55.000 | 5.05 | 0.00 | 35.59 | 3.51 |
723 | 1734 | 1.819305 | GCCGGAATACCATTGCCATCT | 60.819 | 52.381 | 5.05 | 0.00 | 35.59 | 2.90 |
724 | 1735 | 2.552155 | GCCGGAATACCATTGCCATCTA | 60.552 | 50.000 | 5.05 | 0.00 | 35.59 | 1.98 |
725 | 1736 | 3.074412 | CCGGAATACCATTGCCATCTAC | 58.926 | 50.000 | 0.00 | 0.00 | 35.59 | 2.59 |
726 | 1737 | 3.244561 | CCGGAATACCATTGCCATCTACT | 60.245 | 47.826 | 0.00 | 0.00 | 35.59 | 2.57 |
727 | 1738 | 4.020573 | CCGGAATACCATTGCCATCTACTA | 60.021 | 45.833 | 0.00 | 0.00 | 35.59 | 1.82 |
728 | 1739 | 5.338381 | CCGGAATACCATTGCCATCTACTAT | 60.338 | 44.000 | 0.00 | 0.00 | 35.59 | 2.12 |
729 | 1740 | 6.127168 | CCGGAATACCATTGCCATCTACTATA | 60.127 | 42.308 | 0.00 | 0.00 | 35.59 | 1.31 |
730 | 1741 | 7.327975 | CGGAATACCATTGCCATCTACTATAA | 58.672 | 38.462 | 0.00 | 0.00 | 35.59 | 0.98 |
731 | 1742 | 7.277981 | CGGAATACCATTGCCATCTACTATAAC | 59.722 | 40.741 | 0.00 | 0.00 | 35.59 | 1.89 |
732 | 1743 | 7.553044 | GGAATACCATTGCCATCTACTATAACC | 59.447 | 40.741 | 0.00 | 0.00 | 35.97 | 2.85 |
733 | 1744 | 5.904984 | ACCATTGCCATCTACTATAACCA | 57.095 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
734 | 1745 | 6.454223 | ACCATTGCCATCTACTATAACCAT | 57.546 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
735 | 1746 | 6.852404 | ACCATTGCCATCTACTATAACCATT | 58.148 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
736 | 1747 | 7.984475 | ACCATTGCCATCTACTATAACCATTA | 58.016 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
737 | 1748 | 8.614814 | ACCATTGCCATCTACTATAACCATTAT | 58.385 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
738 | 1749 | 9.113838 | CCATTGCCATCTACTATAACCATTATC | 57.886 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
739 | 1750 | 8.820933 | CATTGCCATCTACTATAACCATTATCG | 58.179 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
740 | 1751 | 6.338146 | TGCCATCTACTATAACCATTATCGC | 58.662 | 40.000 | 0.00 | 0.00 | 0.00 | 4.58 |
741 | 1752 | 6.154534 | TGCCATCTACTATAACCATTATCGCT | 59.845 | 38.462 | 0.00 | 0.00 | 0.00 | 4.93 |
742 | 1753 | 7.340999 | TGCCATCTACTATAACCATTATCGCTA | 59.659 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
743 | 1754 | 7.648510 | GCCATCTACTATAACCATTATCGCTAC | 59.351 | 40.741 | 0.00 | 0.00 | 0.00 | 3.58 |
744 | 1755 | 8.904834 | CCATCTACTATAACCATTATCGCTACT | 58.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
745 | 1756 | 9.938670 | CATCTACTATAACCATTATCGCTACTC | 57.061 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
746 | 1757 | 8.194433 | TCTACTATAACCATTATCGCTACTCG | 57.806 | 38.462 | 0.00 | 0.00 | 40.15 | 4.18 |
747 | 1758 | 6.192234 | ACTATAACCATTATCGCTACTCGG | 57.808 | 41.667 | 0.00 | 0.00 | 39.05 | 4.63 |
748 | 1759 | 5.942236 | ACTATAACCATTATCGCTACTCGGA | 59.058 | 40.000 | 0.00 | 0.00 | 39.05 | 4.55 |
749 | 1760 | 5.717078 | ATAACCATTATCGCTACTCGGAA | 57.283 | 39.130 | 0.00 | 0.00 | 39.05 | 4.30 |
772 | 1783 | 3.653344 | GAAATCTTGGAACCCTTGCAAC | 58.347 | 45.455 | 0.00 | 0.00 | 36.01 | 4.17 |
845 | 1857 | 2.038269 | CAAACCGATGACCACCCCG | 61.038 | 63.158 | 0.00 | 0.00 | 0.00 | 5.73 |
925 | 1938 | 3.090532 | ATTCCCTCCGCTCCCCAC | 61.091 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
1040 | 2053 | 2.807895 | CACCGCGTAAGTCACCCG | 60.808 | 66.667 | 4.92 | 0.00 | 41.68 | 5.28 |
1041 | 2054 | 4.729856 | ACCGCGTAAGTCACCCGC | 62.730 | 66.667 | 4.92 | 0.00 | 43.74 | 6.13 |
1042 | 2055 | 4.430765 | CCGCGTAAGTCACCCGCT | 62.431 | 66.667 | 4.92 | 0.00 | 44.92 | 5.52 |
1043 | 2056 | 2.879462 | CGCGTAAGTCACCCGCTC | 60.879 | 66.667 | 0.00 | 0.00 | 44.92 | 5.03 |
1044 | 2057 | 2.508663 | GCGTAAGTCACCCGCTCC | 60.509 | 66.667 | 0.00 | 0.00 | 43.81 | 4.70 |
1045 | 2058 | 2.183555 | CGTAAGTCACCCGCTCCC | 59.816 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1046 | 2059 | 2.183555 | GTAAGTCACCCGCTCCCG | 59.816 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
1047 | 2060 | 3.766691 | TAAGTCACCCGCTCCCGC | 61.767 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
1128 | 2141 | 2.305858 | ACCGACTAACTTGGTCTCCT | 57.694 | 50.000 | 4.02 | 0.00 | 29.00 | 3.69 |
1152 | 2165 | 1.723870 | GCTGATGATTCCGTGGTGC | 59.276 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
1399 | 2413 | 2.352032 | CCGTGAGTCTCCCACCCTC | 61.352 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1402 | 2416 | 1.079256 | TGAGTCTCCCACCCTCCTG | 59.921 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
1403 | 2417 | 2.284995 | AGTCTCCCACCCTCCTGC | 60.285 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
1404 | 2418 | 3.403558 | GTCTCCCACCCTCCTGCC | 61.404 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
1405 | 2419 | 3.940480 | TCTCCCACCCTCCTGCCA | 61.940 | 66.667 | 0.00 | 0.00 | 0.00 | 4.92 |
1451 | 2479 | 3.694566 | GCATCTAGGGTTTCGTTTCCATT | 59.305 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
1569 | 2598 | 2.223618 | GGTTTGTCTGGTTTTTGCGCTA | 60.224 | 45.455 | 9.73 | 0.00 | 0.00 | 4.26 |
1724 | 2765 | 0.645868 | GCGAGTCTCCGTTACAATGC | 59.354 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
1729 | 2770 | 2.038557 | AGTCTCCGTTACAATGCCAGTT | 59.961 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1733 | 2774 | 2.952978 | TCCGTTACAATGCCAGTTTGTT | 59.047 | 40.909 | 0.00 | 0.00 | 38.26 | 2.83 |
1765 | 2806 | 8.800231 | TGGATGATGTTTATATGATTTTTGCG | 57.200 | 30.769 | 0.00 | 0.00 | 0.00 | 4.85 |
1820 | 2861 | 4.188462 | CTGTCCAGTGCCGTTATATTTGA | 58.812 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
1821 | 2862 | 4.776349 | TGTCCAGTGCCGTTATATTTGAT | 58.224 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
1823 | 2864 | 3.563808 | TCCAGTGCCGTTATATTTGATGC | 59.436 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
1824 | 2865 | 3.314913 | CCAGTGCCGTTATATTTGATGCA | 59.685 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
1825 | 2866 | 4.202000 | CCAGTGCCGTTATATTTGATGCAA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
1844 | 2885 | 4.231439 | GCAACTTACCAAAATAACACCCG | 58.769 | 43.478 | 0.00 | 0.00 | 0.00 | 5.28 |
1874 | 2915 | 7.048512 | GTGCTCTGTTACCCTTAACTGATAAT | 58.951 | 38.462 | 5.05 | 0.00 | 42.19 | 1.28 |
1904 | 2945 | 1.393539 | CTCCGTTACAATGTTCTGGCG | 59.606 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
1919 | 2960 | 7.441890 | TGTTCTGGCGTTCTAAAATATTTCA | 57.558 | 32.000 | 0.10 | 0.00 | 0.00 | 2.69 |
1921 | 2962 | 6.102006 | TCTGGCGTTCTAAAATATTTCACG | 57.898 | 37.500 | 0.10 | 8.97 | 0.00 | 4.35 |
1935 | 2976 | 3.784701 | TTTCACGCAAGGTTAGCAAAA | 57.215 | 38.095 | 0.00 | 0.00 | 46.39 | 2.44 |
1943 | 2984 | 4.438148 | GCAAGGTTAGCAAAAGGAAAACA | 58.562 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
2027 | 3069 | 7.723616 | TCTGTTTGGTGAAGGAAAGATGAATTA | 59.276 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2168 | 3211 | 7.060600 | TGAATCTTGTGACGTAAAGCTTATG | 57.939 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2238 | 3281 | 5.441718 | TCCATTTTTATCAGGAGAGCACT | 57.558 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
2297 | 3340 | 2.932614 | GTTCTGACGTTGAGGATGATGG | 59.067 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2381 | 3431 | 5.469479 | ACTTGTTGCTAACATATGTTTGGC | 58.531 | 37.500 | 25.31 | 25.63 | 41.79 | 4.52 |
2391 | 3441 | 7.012327 | GCTAACATATGTTTGGCTGTCTTATCA | 59.988 | 37.037 | 25.31 | 2.42 | 39.31 | 2.15 |
2432 | 3482 | 2.826488 | AGTAGATGAGGGAACAGCAGT | 58.174 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2484 | 3534 | 0.745845 | GCTTGCCATGTCGATGTCCT | 60.746 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2485 | 3535 | 1.293924 | CTTGCCATGTCGATGTCCTC | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2545 | 3595 | 2.273123 | CTGGGCTGTGGCATGCTA | 59.727 | 61.111 | 18.92 | 9.16 | 40.87 | 3.49 |
2607 | 3657 | 3.903467 | ACCCTTGACTGCTTTTCTTTCT | 58.097 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
2658 | 3745 | 8.571336 | AGTCATTATGTTGGCTTGCTATTAATC | 58.429 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2661 | 3748 | 2.031560 | TGTTGGCTTGCTATTAATCGCG | 59.968 | 45.455 | 0.00 | 0.00 | 0.00 | 5.87 |
2677 | 3764 | 3.021269 | TCGCGTTATGTCTTGTGTTCT | 57.979 | 42.857 | 5.77 | 0.00 | 0.00 | 3.01 |
2701 | 3788 | 7.173907 | TCTCCTTTCACTTTCTTATTGCTTCTG | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
2705 | 3792 | 6.748333 | TCACTTTCTTATTGCTTCTGATGG | 57.252 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
2707 | 3794 | 6.372659 | TCACTTTCTTATTGCTTCTGATGGTC | 59.627 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
2710 | 3797 | 5.441718 | TCTTATTGCTTCTGATGGTCCTT | 57.558 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
2711 | 3798 | 5.819991 | TCTTATTGCTTCTGATGGTCCTTT | 58.180 | 37.500 | 0.00 | 0.00 | 0.00 | 3.11 |
2717 | 3804 | 3.415212 | CTTCTGATGGTCCTTTTGCTGA | 58.585 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
2780 | 3874 | 0.820226 | GCCCAATTGCTTTCTCCTCC | 59.180 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2783 | 3877 | 1.470098 | CCAATTGCTTTCTCCTCCGTG | 59.530 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2807 | 3984 | 2.079925 | GACCAATGGCTGTCTGTTCTC | 58.920 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
2814 | 3991 | 2.880268 | TGGCTGTCTGTTCTCACATTTG | 59.120 | 45.455 | 0.00 | 0.00 | 30.39 | 2.32 |
2819 | 3996 | 1.881973 | TCTGTTCTCACATTTGGCAGC | 59.118 | 47.619 | 0.00 | 0.00 | 30.39 | 5.25 |
2835 | 4012 | 2.011046 | GCAGCCAGGACATCAGAAGTC | 61.011 | 57.143 | 0.00 | 0.00 | 35.29 | 3.01 |
2841 | 4018 | 5.663106 | AGCCAGGACATCAGAAGTCTAATTA | 59.337 | 40.000 | 5.78 | 0.00 | 36.29 | 1.40 |
2843 | 4020 | 6.995091 | GCCAGGACATCAGAAGTCTAATTATT | 59.005 | 38.462 | 5.78 | 0.00 | 36.29 | 1.40 |
2882 | 4059 | 5.229921 | TGTAAAAATCGATGCTAGTTGCC | 57.770 | 39.130 | 0.00 | 0.00 | 42.00 | 4.52 |
2921 | 4107 | 3.849911 | TGTGTGACTATAGTGCAGCTTC | 58.150 | 45.455 | 10.90 | 0.00 | 0.00 | 3.86 |
2923 | 4109 | 4.705023 | TGTGTGACTATAGTGCAGCTTCTA | 59.295 | 41.667 | 10.90 | 0.00 | 0.00 | 2.10 |
2924 | 4110 | 5.185056 | TGTGTGACTATAGTGCAGCTTCTAA | 59.815 | 40.000 | 10.90 | 0.00 | 0.00 | 2.10 |
2925 | 4111 | 6.100004 | GTGTGACTATAGTGCAGCTTCTAAA | 58.900 | 40.000 | 10.90 | 0.00 | 0.00 | 1.85 |
2959 | 4193 | 7.361201 | CGTGGTAACTTCATCAGATTCAAACAT | 60.361 | 37.037 | 0.00 | 0.00 | 37.61 | 2.71 |
2960 | 4194 | 8.946085 | GTGGTAACTTCATCAGATTCAAACATA | 58.054 | 33.333 | 0.00 | 0.00 | 37.61 | 2.29 |
2979 | 4213 | 9.033481 | CAAACATATTAAGTTTGCCCATGTATG | 57.967 | 33.333 | 10.54 | 0.00 | 46.16 | 2.39 |
2980 | 4214 | 7.896383 | ACATATTAAGTTTGCCCATGTATGT | 57.104 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2992 | 4234 | 5.174395 | GCCCATGTATGTAAATTTGTGCAA | 58.826 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
3025 | 4267 | 6.331577 | TGATAGTGTAAGGTACCCTCTGTA | 57.668 | 41.667 | 8.74 | 0.00 | 30.89 | 2.74 |
3057 | 4299 | 4.994217 | ACAACAAAATCATTTTAAGGCGGG | 59.006 | 37.500 | 0.00 | 0.00 | 0.00 | 6.13 |
3129 | 4517 | 1.727335 | GTCAAGAACCTTAGCGAGTGC | 59.273 | 52.381 | 0.00 | 0.00 | 43.24 | 4.40 |
3186 | 4578 | 2.401766 | GGTGCAGTTGGCCATCTCG | 61.402 | 63.158 | 13.63 | 10.38 | 43.89 | 4.04 |
3199 | 4591 | 4.155826 | TGGCCATCTCGAACAAACATAAAG | 59.844 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
3202 | 4594 | 6.378582 | GCCATCTCGAACAAACATAAAGAAA | 58.621 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3203 | 4595 | 6.524586 | GCCATCTCGAACAAACATAAAGAAAG | 59.475 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
3204 | 4596 | 7.023575 | CCATCTCGAACAAACATAAAGAAAGG | 58.976 | 38.462 | 0.00 | 0.00 | 0.00 | 3.11 |
3221 | 4613 | 6.043854 | AGAAAGGGAGCTTTACAACTAGAG | 57.956 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
3228 | 4620 | 5.644206 | GGAGCTTTACAACTAGAGGAAAAGG | 59.356 | 44.000 | 0.00 | 0.00 | 0.00 | 3.11 |
3234 | 4626 | 4.974399 | ACAACTAGAGGAAAAGGAACTGG | 58.026 | 43.478 | 0.00 | 0.00 | 40.86 | 4.00 |
3404 | 4796 | 1.478105 | GCCCTTTCAGGTTTATGCAGG | 59.522 | 52.381 | 0.00 | 0.00 | 31.93 | 4.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
14 | 15 | 0.264359 | AGCTCTGATGCTAGAGGGGT | 59.736 | 55.000 | 12.80 | 0.00 | 43.49 | 4.95 |
34 | 35 | 2.813908 | GGTCTTACGGCAGGCGTG | 60.814 | 66.667 | 30.77 | 15.92 | 0.00 | 5.34 |
42 | 43 | 2.575461 | GGTCGGTGGGTCTTACGG | 59.425 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
52 | 53 | 3.803082 | CAGCAATGCCGGTCGGTG | 61.803 | 66.667 | 11.25 | 1.10 | 37.65 | 4.94 |
61 | 62 | 0.734889 | ACGATGGTTAGCAGCAATGC | 59.265 | 50.000 | 0.00 | 0.00 | 33.01 | 3.56 |
95 | 96 | 1.709147 | GCATGGCATCGACACCAGTC | 61.709 | 60.000 | 13.23 | 4.70 | 39.88 | 3.51 |
96 | 97 | 1.746615 | GCATGGCATCGACACCAGT | 60.747 | 57.895 | 13.23 | 0.85 | 39.88 | 4.00 |
97 | 98 | 2.475466 | GGCATGGCATCGACACCAG | 61.475 | 63.158 | 15.47 | 7.29 | 39.88 | 4.00 |
98 | 99 | 2.438254 | GGCATGGCATCGACACCA | 60.438 | 61.111 | 15.47 | 10.46 | 41.06 | 4.17 |
99 | 100 | 2.045708 | TTGGCATGGCATCGACACC | 61.046 | 57.895 | 23.96 | 0.00 | 0.00 | 4.16 |
100 | 101 | 1.137404 | GTTGGCATGGCATCGACAC | 59.863 | 57.895 | 23.96 | 13.88 | 0.00 | 3.67 |
101 | 102 | 1.002257 | AGTTGGCATGGCATCGACA | 60.002 | 52.632 | 23.96 | 4.41 | 0.00 | 4.35 |
124 | 125 | 2.292569 | GACGACTAGGACATGGCGATAA | 59.707 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
125 | 126 | 1.878088 | GACGACTAGGACATGGCGATA | 59.122 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
128 | 129 | 1.298413 | CGACGACTAGGACATGGCG | 60.298 | 63.158 | 0.00 | 0.00 | 0.00 | 5.69 |
145 | 146 | 1.804326 | GGACGGACCATCAACGACG | 60.804 | 63.158 | 0.00 | 0.00 | 38.79 | 5.12 |
186 | 187 | 1.628846 | GCTTGTGGAGGAGGGAGTTTA | 59.371 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
194 | 195 | 1.500474 | TAGGGATGCTTGTGGAGGAG | 58.500 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
199 | 200 | 0.625849 | AGGGTTAGGGATGCTTGTGG | 59.374 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
201 | 202 | 3.190439 | AGTTAGGGTTAGGGATGCTTGT | 58.810 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
235 | 244 | 1.745489 | GGAGGCACCGGTGATGAAC | 60.745 | 63.158 | 38.30 | 19.27 | 0.00 | 3.18 |
242 | 251 | 4.954118 | TGGAGTGGAGGCACCGGT | 62.954 | 66.667 | 0.00 | 0.00 | 42.61 | 5.28 |
256 | 265 | 3.760035 | GGAAGCGAGCGAGGTGGA | 61.760 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
259 | 268 | 4.070552 | GGTGGAAGCGAGCGAGGT | 62.071 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
268 | 277 | 2.877691 | GATGTTGGCGGTGGAAGC | 59.122 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
269 | 278 | 1.671054 | ACGATGTTGGCGGTGGAAG | 60.671 | 57.895 | 0.00 | 0.00 | 0.00 | 3.46 |
293 | 302 | 4.838486 | CGAGCTCGGAGACACGGC | 62.838 | 72.222 | 28.40 | 0.00 | 35.37 | 5.68 |
317 | 326 | 2.443255 | CCTCCCATGTATTGTAGGCCTT | 59.557 | 50.000 | 12.58 | 0.00 | 0.00 | 4.35 |
386 | 395 | 0.879400 | CGAGCTGGCTGGCTATCTTG | 60.879 | 60.000 | 0.00 | 0.00 | 43.20 | 3.02 |
387 | 396 | 1.445095 | CGAGCTGGCTGGCTATCTT | 59.555 | 57.895 | 0.00 | 0.00 | 43.20 | 2.40 |
388 | 397 | 2.506061 | CCGAGCTGGCTGGCTATCT | 61.506 | 63.158 | 0.00 | 0.00 | 43.20 | 1.98 |
457 | 1468 | 7.148474 | GCTTGTATCCGTACTGATCTTCAAAAA | 60.148 | 37.037 | 2.74 | 0.00 | 0.00 | 1.94 |
459 | 1470 | 5.810587 | GCTTGTATCCGTACTGATCTTCAAA | 59.189 | 40.000 | 2.74 | 0.00 | 0.00 | 2.69 |
462 | 1473 | 3.975670 | CGCTTGTATCCGTACTGATCTTC | 59.024 | 47.826 | 2.74 | 0.00 | 0.00 | 2.87 |
464 | 1475 | 2.287668 | GCGCTTGTATCCGTACTGATCT | 60.288 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
467 | 1478 | 1.065102 | GAGCGCTTGTATCCGTACTGA | 59.935 | 52.381 | 13.26 | 0.00 | 0.00 | 3.41 |
469 | 1480 | 1.100510 | TGAGCGCTTGTATCCGTACT | 58.899 | 50.000 | 13.26 | 0.00 | 0.00 | 2.73 |
471 | 1482 | 5.830000 | ATATATGAGCGCTTGTATCCGTA | 57.170 | 39.130 | 13.26 | 3.35 | 0.00 | 4.02 |
472 | 1483 | 4.720649 | ATATATGAGCGCTTGTATCCGT | 57.279 | 40.909 | 13.26 | 0.64 | 0.00 | 4.69 |
473 | 1484 | 5.117745 | GCATATATATGAGCGCTTGTATCCG | 59.882 | 44.000 | 24.06 | 1.15 | 35.75 | 4.18 |
475 | 1486 | 6.133569 | CGCATATATATGAGCGCTTGTATC | 57.866 | 41.667 | 24.06 | 0.00 | 43.80 | 2.24 |
496 | 1507 | 0.531532 | ATAGGAGTGAGTGCATGCGC | 60.532 | 55.000 | 23.64 | 23.64 | 39.24 | 6.09 |
497 | 1508 | 1.202452 | TCATAGGAGTGAGTGCATGCG | 60.202 | 52.381 | 14.09 | 0.00 | 0.00 | 4.73 |
498 | 1509 | 2.609427 | TCATAGGAGTGAGTGCATGC | 57.391 | 50.000 | 11.82 | 11.82 | 0.00 | 4.06 |
499 | 1510 | 2.862536 | CGTTCATAGGAGTGAGTGCATG | 59.137 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
501 | 1512 | 1.404181 | GCGTTCATAGGAGTGAGTGCA | 60.404 | 52.381 | 0.00 | 0.00 | 33.16 | 4.57 |
502 | 1513 | 1.281899 | GCGTTCATAGGAGTGAGTGC | 58.718 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
504 | 1515 | 1.893137 | TGTGCGTTCATAGGAGTGAGT | 59.107 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
505 | 1516 | 2.263077 | GTGTGCGTTCATAGGAGTGAG | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
506 | 1517 | 1.616374 | TGTGTGCGTTCATAGGAGTGA | 59.384 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
507 | 1518 | 1.726791 | GTGTGTGCGTTCATAGGAGTG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
508 | 1519 | 1.337823 | GGTGTGTGCGTTCATAGGAGT | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
509 | 1520 | 1.359848 | GGTGTGTGCGTTCATAGGAG | 58.640 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
510 | 1521 | 0.036765 | GGGTGTGTGCGTTCATAGGA | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
511 | 1522 | 0.321210 | TGGGTGTGTGCGTTCATAGG | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
513 | 1524 | 0.106894 | TGTGGGTGTGTGCGTTCATA | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
514 | 1525 | 1.153066 | TGTGGGTGTGTGCGTTCAT | 60.153 | 52.632 | 0.00 | 0.00 | 0.00 | 2.57 |
515 | 1526 | 2.109739 | GTGTGGGTGTGTGCGTTCA | 61.110 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
516 | 1527 | 2.713154 | GTGTGGGTGTGTGCGTTC | 59.287 | 61.111 | 0.00 | 0.00 | 0.00 | 3.95 |
517 | 1528 | 2.826738 | GGTGTGGGTGTGTGCGTT | 60.827 | 61.111 | 0.00 | 0.00 | 0.00 | 4.84 |
518 | 1529 | 4.868116 | GGGTGTGGGTGTGTGCGT | 62.868 | 66.667 | 0.00 | 0.00 | 0.00 | 5.24 |
519 | 1530 | 2.463589 | ATAGGGTGTGGGTGTGTGCG | 62.464 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
520 | 1531 | 0.960364 | CATAGGGTGTGGGTGTGTGC | 60.960 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
521 | 1532 | 0.690192 | TCATAGGGTGTGGGTGTGTG | 59.310 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
522 | 1533 | 0.984230 | CTCATAGGGTGTGGGTGTGT | 59.016 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
523 | 1534 | 0.392998 | GCTCATAGGGTGTGGGTGTG | 60.393 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
524 | 1535 | 0.840288 | TGCTCATAGGGTGTGGGTGT | 60.840 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
525 | 1536 | 0.548031 | ATGCTCATAGGGTGTGGGTG | 59.452 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
526 | 1537 | 2.190398 | TATGCTCATAGGGTGTGGGT | 57.810 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
527 | 1538 | 2.026822 | GGATATGCTCATAGGGTGTGGG | 60.027 | 54.545 | 0.00 | 0.00 | 0.00 | 4.61 |
528 | 1539 | 2.354103 | CGGATATGCTCATAGGGTGTGG | 60.354 | 54.545 | 0.00 | 0.00 | 0.00 | 4.17 |
529 | 1540 | 2.562738 | TCGGATATGCTCATAGGGTGTG | 59.437 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
530 | 1541 | 2.828520 | CTCGGATATGCTCATAGGGTGT | 59.171 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
531 | 1542 | 3.092301 | TCTCGGATATGCTCATAGGGTG | 58.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
532 | 1543 | 3.010696 | TCTCTCGGATATGCTCATAGGGT | 59.989 | 47.826 | 0.00 | 0.00 | 0.00 | 4.34 |
533 | 1544 | 3.380004 | GTCTCTCGGATATGCTCATAGGG | 59.620 | 52.174 | 0.00 | 0.00 | 0.00 | 3.53 |
534 | 1545 | 4.096231 | CAGTCTCTCGGATATGCTCATAGG | 59.904 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
535 | 1546 | 4.940654 | TCAGTCTCTCGGATATGCTCATAG | 59.059 | 45.833 | 0.00 | 0.00 | 0.00 | 2.23 |
536 | 1547 | 4.911390 | TCAGTCTCTCGGATATGCTCATA | 58.089 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
537 | 1548 | 3.758023 | CTCAGTCTCTCGGATATGCTCAT | 59.242 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
538 | 1549 | 3.145286 | CTCAGTCTCTCGGATATGCTCA | 58.855 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
539 | 1550 | 2.095263 | GCTCAGTCTCTCGGATATGCTC | 60.095 | 54.545 | 0.00 | 0.00 | 0.00 | 4.26 |
540 | 1551 | 1.885887 | GCTCAGTCTCTCGGATATGCT | 59.114 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
541 | 1552 | 1.067915 | GGCTCAGTCTCTCGGATATGC | 60.068 | 57.143 | 0.00 | 0.00 | 0.00 | 3.14 |
542 | 1553 | 1.198867 | CGGCTCAGTCTCTCGGATATG | 59.801 | 57.143 | 0.00 | 0.00 | 0.00 | 1.78 |
543 | 1554 | 1.072489 | TCGGCTCAGTCTCTCGGATAT | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 1.63 |
544 | 1555 | 0.468648 | TCGGCTCAGTCTCTCGGATA | 59.531 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
545 | 1556 | 0.179004 | ATCGGCTCAGTCTCTCGGAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
546 | 1557 | 0.468648 | TATCGGCTCAGTCTCTCGGA | 59.531 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
547 | 1558 | 1.529226 | ATATCGGCTCAGTCTCTCGG | 58.471 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
548 | 1559 | 3.935828 | TGATATATCGGCTCAGTCTCTCG | 59.064 | 47.826 | 8.19 | 0.00 | 0.00 | 4.04 |
549 | 1560 | 5.822519 | AGATGATATATCGGCTCAGTCTCTC | 59.177 | 44.000 | 8.19 | 0.00 | 0.00 | 3.20 |
550 | 1561 | 5.754782 | AGATGATATATCGGCTCAGTCTCT | 58.245 | 41.667 | 8.19 | 0.00 | 0.00 | 3.10 |
551 | 1562 | 6.094742 | TCAAGATGATATATCGGCTCAGTCTC | 59.905 | 42.308 | 8.19 | 0.00 | 0.00 | 3.36 |
552 | 1563 | 5.948758 | TCAAGATGATATATCGGCTCAGTCT | 59.051 | 40.000 | 8.19 | 1.02 | 0.00 | 3.24 |
553 | 1564 | 6.094742 | TCTCAAGATGATATATCGGCTCAGTC | 59.905 | 42.308 | 8.19 | 0.00 | 0.00 | 3.51 |
554 | 1565 | 5.948758 | TCTCAAGATGATATATCGGCTCAGT | 59.051 | 40.000 | 8.19 | 0.00 | 0.00 | 3.41 |
555 | 1566 | 6.448207 | TCTCAAGATGATATATCGGCTCAG | 57.552 | 41.667 | 8.19 | 7.42 | 0.00 | 3.35 |
556 | 1567 | 7.415592 | AATCTCAAGATGATATATCGGCTCA | 57.584 | 36.000 | 8.19 | 0.00 | 34.49 | 4.26 |
557 | 1568 | 8.715191 | AAAATCTCAAGATGATATATCGGCTC | 57.285 | 34.615 | 8.19 | 5.21 | 34.49 | 4.70 |
567 | 1578 | 9.171877 | GGTGACTTCTTAAAATCTCAAGATGAT | 57.828 | 33.333 | 0.00 | 0.00 | 34.49 | 2.45 |
568 | 1579 | 7.331934 | CGGTGACTTCTTAAAATCTCAAGATGA | 59.668 | 37.037 | 0.00 | 0.00 | 34.49 | 2.92 |
569 | 1580 | 7.118390 | ACGGTGACTTCTTAAAATCTCAAGATG | 59.882 | 37.037 | 0.00 | 0.00 | 34.49 | 2.90 |
570 | 1581 | 7.162082 | ACGGTGACTTCTTAAAATCTCAAGAT | 58.838 | 34.615 | 0.00 | 0.00 | 36.07 | 2.40 |
571 | 1582 | 6.522054 | ACGGTGACTTCTTAAAATCTCAAGA | 58.478 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
572 | 1583 | 6.787085 | ACGGTGACTTCTTAAAATCTCAAG | 57.213 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
573 | 1584 | 7.095940 | CGTTACGGTGACTTCTTAAAATCTCAA | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
574 | 1585 | 6.364165 | CGTTACGGTGACTTCTTAAAATCTCA | 59.636 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
575 | 1586 | 6.669268 | GCGTTACGGTGACTTCTTAAAATCTC | 60.669 | 42.308 | 6.94 | 0.00 | 0.00 | 2.75 |
576 | 1587 | 5.119743 | GCGTTACGGTGACTTCTTAAAATCT | 59.880 | 40.000 | 6.94 | 0.00 | 0.00 | 2.40 |
577 | 1588 | 5.311271 | GCGTTACGGTGACTTCTTAAAATC | 58.689 | 41.667 | 6.94 | 0.00 | 0.00 | 2.17 |
578 | 1589 | 4.152938 | GGCGTTACGGTGACTTCTTAAAAT | 59.847 | 41.667 | 6.94 | 0.00 | 0.00 | 1.82 |
579 | 1590 | 3.494251 | GGCGTTACGGTGACTTCTTAAAA | 59.506 | 43.478 | 6.94 | 0.00 | 0.00 | 1.52 |
580 | 1591 | 3.059166 | GGCGTTACGGTGACTTCTTAAA | 58.941 | 45.455 | 6.94 | 0.00 | 0.00 | 1.52 |
581 | 1592 | 2.297033 | AGGCGTTACGGTGACTTCTTAA | 59.703 | 45.455 | 6.94 | 0.00 | 0.00 | 1.85 |
582 | 1593 | 1.888512 | AGGCGTTACGGTGACTTCTTA | 59.111 | 47.619 | 6.94 | 0.00 | 0.00 | 2.10 |
583 | 1594 | 0.677842 | AGGCGTTACGGTGACTTCTT | 59.322 | 50.000 | 6.94 | 0.00 | 0.00 | 2.52 |
584 | 1595 | 0.243095 | GAGGCGTTACGGTGACTTCT | 59.757 | 55.000 | 6.94 | 0.00 | 0.00 | 2.85 |
585 | 1596 | 1.069378 | CGAGGCGTTACGGTGACTTC | 61.069 | 60.000 | 6.94 | 0.00 | 0.00 | 3.01 |
586 | 1597 | 1.080974 | CGAGGCGTTACGGTGACTT | 60.081 | 57.895 | 6.94 | 0.00 | 0.00 | 3.01 |
587 | 1598 | 0.955428 | TACGAGGCGTTACGGTGACT | 60.955 | 55.000 | 6.94 | 0.00 | 41.54 | 3.41 |
588 | 1599 | 0.522076 | CTACGAGGCGTTACGGTGAC | 60.522 | 60.000 | 6.94 | 0.00 | 41.54 | 3.67 |
589 | 1600 | 0.955428 | ACTACGAGGCGTTACGGTGA | 60.955 | 55.000 | 6.94 | 0.00 | 41.54 | 4.02 |
590 | 1601 | 0.522076 | GACTACGAGGCGTTACGGTG | 60.522 | 60.000 | 6.94 | 0.00 | 41.54 | 4.94 |
591 | 1602 | 1.796796 | GACTACGAGGCGTTACGGT | 59.203 | 57.895 | 6.94 | 0.00 | 41.54 | 4.83 |
592 | 1603 | 1.297158 | CGACTACGAGGCGTTACGG | 60.297 | 63.158 | 6.94 | 0.00 | 42.99 | 4.02 |
593 | 1604 | 4.258781 | CGACTACGAGGCGTTACG | 57.741 | 61.111 | 0.00 | 0.00 | 42.99 | 3.18 |
604 | 1615 | 3.002102 | AGAAGAGGTTCTCGTCGACTAC | 58.998 | 50.000 | 14.70 | 6.25 | 42.23 | 2.73 |
605 | 1616 | 3.331478 | AGAAGAGGTTCTCGTCGACTA | 57.669 | 47.619 | 14.70 | 0.95 | 42.23 | 2.59 |
606 | 1617 | 2.188062 | AGAAGAGGTTCTCGTCGACT | 57.812 | 50.000 | 14.70 | 0.00 | 42.23 | 4.18 |
607 | 1618 | 2.993449 | AAGAAGAGGTTCTCGTCGAC | 57.007 | 50.000 | 5.18 | 5.18 | 42.59 | 4.20 |
608 | 1619 | 2.882761 | TGAAAGAAGAGGTTCTCGTCGA | 59.117 | 45.455 | 0.00 | 0.00 | 42.59 | 4.20 |
609 | 1620 | 3.284323 | TGAAAGAAGAGGTTCTCGTCG | 57.716 | 47.619 | 5.50 | 0.00 | 42.59 | 5.12 |
610 | 1621 | 5.230942 | TCAATGAAAGAAGAGGTTCTCGTC | 58.769 | 41.667 | 3.30 | 3.30 | 42.59 | 4.20 |
611 | 1622 | 5.215252 | TCAATGAAAGAAGAGGTTCTCGT | 57.785 | 39.130 | 0.00 | 0.00 | 42.59 | 4.18 |
612 | 1623 | 5.466728 | TGTTCAATGAAAGAAGAGGTTCTCG | 59.533 | 40.000 | 0.00 | 0.00 | 42.59 | 4.04 |
613 | 1624 | 6.564873 | CGTGTTCAATGAAAGAAGAGGTTCTC | 60.565 | 42.308 | 0.00 | 0.00 | 42.59 | 2.87 |
614 | 1625 | 5.237344 | CGTGTTCAATGAAAGAAGAGGTTCT | 59.763 | 40.000 | 0.00 | 0.00 | 45.56 | 3.01 |
615 | 1626 | 5.007724 | ACGTGTTCAATGAAAGAAGAGGTTC | 59.992 | 40.000 | 0.00 | 0.00 | 34.92 | 3.62 |
616 | 1627 | 4.881850 | ACGTGTTCAATGAAAGAAGAGGTT | 59.118 | 37.500 | 0.00 | 0.00 | 34.92 | 3.50 |
617 | 1628 | 4.451900 | ACGTGTTCAATGAAAGAAGAGGT | 58.548 | 39.130 | 0.00 | 0.00 | 34.08 | 3.85 |
618 | 1629 | 6.368791 | TGATACGTGTTCAATGAAAGAAGAGG | 59.631 | 38.462 | 0.00 | 0.00 | 32.50 | 3.69 |
619 | 1630 | 7.230222 | GTGATACGTGTTCAATGAAAGAAGAG | 58.770 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
620 | 1631 | 6.147164 | GGTGATACGTGTTCAATGAAAGAAGA | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
621 | 1632 | 6.307155 | GGTGATACGTGTTCAATGAAAGAAG | 58.693 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
622 | 1633 | 5.107259 | CGGTGATACGTGTTCAATGAAAGAA | 60.107 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
623 | 1634 | 4.387559 | CGGTGATACGTGTTCAATGAAAGA | 59.612 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
624 | 1635 | 4.387559 | TCGGTGATACGTGTTCAATGAAAG | 59.612 | 41.667 | 0.00 | 0.00 | 34.94 | 2.62 |
625 | 1636 | 4.308265 | TCGGTGATACGTGTTCAATGAAA | 58.692 | 39.130 | 0.00 | 0.00 | 34.94 | 2.69 |
626 | 1637 | 3.915536 | TCGGTGATACGTGTTCAATGAA | 58.084 | 40.909 | 0.00 | 0.00 | 34.94 | 2.57 |
627 | 1638 | 3.579335 | TCGGTGATACGTGTTCAATGA | 57.421 | 42.857 | 0.00 | 0.35 | 34.94 | 2.57 |
628 | 1639 | 4.655440 | TTTCGGTGATACGTGTTCAATG | 57.345 | 40.909 | 0.00 | 0.00 | 34.94 | 2.82 |
629 | 1640 | 5.410132 | TGATTTTCGGTGATACGTGTTCAAT | 59.590 | 36.000 | 0.00 | 0.00 | 34.94 | 2.57 |
630 | 1641 | 4.750598 | TGATTTTCGGTGATACGTGTTCAA | 59.249 | 37.500 | 0.00 | 0.00 | 34.94 | 2.69 |
631 | 1642 | 4.308265 | TGATTTTCGGTGATACGTGTTCA | 58.692 | 39.130 | 0.00 | 0.00 | 34.94 | 3.18 |
632 | 1643 | 4.914312 | TGATTTTCGGTGATACGTGTTC | 57.086 | 40.909 | 0.00 | 0.00 | 34.94 | 3.18 |
633 | 1644 | 4.932799 | TCATGATTTTCGGTGATACGTGTT | 59.067 | 37.500 | 0.00 | 0.00 | 34.94 | 3.32 |
634 | 1645 | 4.500127 | TCATGATTTTCGGTGATACGTGT | 58.500 | 39.130 | 0.00 | 0.00 | 34.94 | 4.49 |
635 | 1646 | 5.463499 | TTCATGATTTTCGGTGATACGTG | 57.537 | 39.130 | 0.00 | 0.00 | 34.94 | 4.49 |
636 | 1647 | 6.677781 | ATTTCATGATTTTCGGTGATACGT | 57.322 | 33.333 | 0.00 | 0.00 | 34.94 | 3.57 |
637 | 1648 | 8.072238 | TCTATTTCATGATTTTCGGTGATACG | 57.928 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
657 | 1668 | 9.669353 | CGTGCTTGCATTTATCTTAAATCTATT | 57.331 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
658 | 1669 | 9.056005 | TCGTGCTTGCATTTATCTTAAATCTAT | 57.944 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
659 | 1670 | 8.432110 | TCGTGCTTGCATTTATCTTAAATCTA | 57.568 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
660 | 1671 | 7.320443 | TCGTGCTTGCATTTATCTTAAATCT | 57.680 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
661 | 1672 | 6.634436 | CCTCGTGCTTGCATTTATCTTAAATC | 59.366 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
662 | 1673 | 6.318648 | TCCTCGTGCTTGCATTTATCTTAAAT | 59.681 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
663 | 1674 | 5.645929 | TCCTCGTGCTTGCATTTATCTTAAA | 59.354 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
664 | 1675 | 5.064707 | GTCCTCGTGCTTGCATTTATCTTAA | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
665 | 1676 | 4.570772 | GTCCTCGTGCTTGCATTTATCTTA | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
666 | 1677 | 3.375299 | GTCCTCGTGCTTGCATTTATCTT | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
667 | 1678 | 2.939103 | GTCCTCGTGCTTGCATTTATCT | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
668 | 1679 | 2.939103 | AGTCCTCGTGCTTGCATTTATC | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
669 | 1680 | 2.991250 | AGTCCTCGTGCTTGCATTTAT | 58.009 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
670 | 1681 | 2.472695 | AGTCCTCGTGCTTGCATTTA | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
671 | 1682 | 1.609208 | AAGTCCTCGTGCTTGCATTT | 58.391 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
672 | 1683 | 2.472695 | TAAGTCCTCGTGCTTGCATT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 3.56 |
673 | 1684 | 2.472695 | TTAAGTCCTCGTGCTTGCAT | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
674 | 1685 | 2.248280 | TTTAAGTCCTCGTGCTTGCA | 57.752 | 45.000 | 0.00 | 0.00 | 0.00 | 4.08 |
675 | 1686 | 2.096013 | GGATTTAAGTCCTCGTGCTTGC | 59.904 | 50.000 | 9.67 | 0.00 | 35.32 | 4.01 |
676 | 1687 | 3.372206 | CAGGATTTAAGTCCTCGTGCTTG | 59.628 | 47.826 | 16.20 | 1.62 | 45.51 | 4.01 |
677 | 1688 | 3.260884 | TCAGGATTTAAGTCCTCGTGCTT | 59.739 | 43.478 | 16.20 | 0.00 | 45.51 | 3.91 |
678 | 1689 | 2.832129 | TCAGGATTTAAGTCCTCGTGCT | 59.168 | 45.455 | 16.20 | 0.00 | 45.51 | 4.40 |
679 | 1690 | 3.247006 | TCAGGATTTAAGTCCTCGTGC | 57.753 | 47.619 | 16.20 | 0.00 | 45.51 | 5.34 |
680 | 1691 | 4.122776 | CCATCAGGATTTAAGTCCTCGTG | 58.877 | 47.826 | 16.20 | 15.97 | 45.51 | 4.35 |
681 | 1692 | 3.134804 | CCCATCAGGATTTAAGTCCTCGT | 59.865 | 47.826 | 16.20 | 5.81 | 45.51 | 4.18 |
682 | 1693 | 3.733337 | CCCATCAGGATTTAAGTCCTCG | 58.267 | 50.000 | 16.20 | 11.95 | 45.51 | 4.63 |
683 | 1694 | 3.481453 | GCCCATCAGGATTTAAGTCCTC | 58.519 | 50.000 | 16.20 | 1.40 | 45.51 | 3.71 |
685 | 1696 | 2.587522 | GGCCCATCAGGATTTAAGTCC | 58.412 | 52.381 | 8.94 | 8.94 | 38.24 | 3.85 |
686 | 1697 | 2.222027 | CGGCCCATCAGGATTTAAGTC | 58.778 | 52.381 | 0.00 | 0.00 | 38.24 | 3.01 |
687 | 1698 | 1.133792 | CCGGCCCATCAGGATTTAAGT | 60.134 | 52.381 | 0.00 | 0.00 | 38.24 | 2.24 |
688 | 1699 | 1.142870 | TCCGGCCCATCAGGATTTAAG | 59.857 | 52.381 | 0.00 | 0.00 | 38.24 | 1.85 |
689 | 1700 | 1.217916 | TCCGGCCCATCAGGATTTAA | 58.782 | 50.000 | 0.00 | 0.00 | 38.24 | 1.52 |
690 | 1701 | 1.217916 | TTCCGGCCCATCAGGATTTA | 58.782 | 50.000 | 0.00 | 0.00 | 38.84 | 1.40 |
691 | 1702 | 0.557729 | ATTCCGGCCCATCAGGATTT | 59.442 | 50.000 | 0.00 | 0.00 | 38.84 | 2.17 |
692 | 1703 | 1.073923 | GTATTCCGGCCCATCAGGATT | 59.926 | 52.381 | 0.00 | 0.00 | 38.84 | 3.01 |
693 | 1704 | 0.693049 | GTATTCCGGCCCATCAGGAT | 59.307 | 55.000 | 0.00 | 0.00 | 38.84 | 3.24 |
694 | 1705 | 1.415672 | GGTATTCCGGCCCATCAGGA | 61.416 | 60.000 | 0.00 | 0.00 | 38.24 | 3.86 |
695 | 1706 | 1.073199 | GGTATTCCGGCCCATCAGG | 59.927 | 63.158 | 0.00 | 0.00 | 39.47 | 3.86 |
696 | 1707 | 0.401738 | ATGGTATTCCGGCCCATCAG | 59.598 | 55.000 | 0.00 | 0.00 | 33.73 | 2.90 |
697 | 1708 | 0.850100 | AATGGTATTCCGGCCCATCA | 59.150 | 50.000 | 13.04 | 0.70 | 38.00 | 3.07 |
698 | 1709 | 1.247567 | CAATGGTATTCCGGCCCATC | 58.752 | 55.000 | 13.04 | 0.00 | 38.00 | 3.51 |
699 | 1710 | 0.827507 | GCAATGGTATTCCGGCCCAT | 60.828 | 55.000 | 0.00 | 2.49 | 40.68 | 4.00 |
700 | 1711 | 1.454847 | GCAATGGTATTCCGGCCCA | 60.455 | 57.895 | 0.00 | 0.00 | 36.30 | 5.36 |
701 | 1712 | 2.200337 | GGCAATGGTATTCCGGCCC | 61.200 | 63.158 | 0.00 | 0.00 | 40.08 | 5.80 |
702 | 1713 | 0.827507 | ATGGCAATGGTATTCCGGCC | 60.828 | 55.000 | 0.00 | 10.39 | 43.56 | 6.13 |
703 | 1714 | 0.598065 | GATGGCAATGGTATTCCGGC | 59.402 | 55.000 | 0.00 | 0.00 | 36.30 | 6.13 |
704 | 1715 | 2.276732 | AGATGGCAATGGTATTCCGG | 57.723 | 50.000 | 0.00 | 0.00 | 36.30 | 5.14 |
705 | 1716 | 4.008074 | AGTAGATGGCAATGGTATTCCG | 57.992 | 45.455 | 0.00 | 0.00 | 36.30 | 4.30 |
706 | 1717 | 7.553044 | GGTTATAGTAGATGGCAATGGTATTCC | 59.447 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
707 | 1718 | 8.100791 | TGGTTATAGTAGATGGCAATGGTATTC | 58.899 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
708 | 1719 | 7.984475 | TGGTTATAGTAGATGGCAATGGTATT | 58.016 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
709 | 1720 | 7.568128 | TGGTTATAGTAGATGGCAATGGTAT | 57.432 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
710 | 1721 | 7.568128 | ATGGTTATAGTAGATGGCAATGGTA | 57.432 | 36.000 | 0.00 | 0.00 | 0.00 | 3.25 |
711 | 1722 | 5.904984 | TGGTTATAGTAGATGGCAATGGT | 57.095 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
712 | 1723 | 9.113838 | GATAATGGTTATAGTAGATGGCAATGG | 57.886 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
713 | 1724 | 8.820933 | CGATAATGGTTATAGTAGATGGCAATG | 58.179 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
714 | 1725 | 7.495934 | GCGATAATGGTTATAGTAGATGGCAAT | 59.504 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
715 | 1726 | 6.816640 | GCGATAATGGTTATAGTAGATGGCAA | 59.183 | 38.462 | 0.00 | 0.00 | 0.00 | 4.52 |
716 | 1727 | 6.154534 | AGCGATAATGGTTATAGTAGATGGCA | 59.845 | 38.462 | 0.00 | 0.00 | 0.00 | 4.92 |
717 | 1728 | 6.574350 | AGCGATAATGGTTATAGTAGATGGC | 58.426 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
718 | 1729 | 8.904834 | AGTAGCGATAATGGTTATAGTAGATGG | 58.095 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
719 | 1730 | 9.938670 | GAGTAGCGATAATGGTTATAGTAGATG | 57.061 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
720 | 1731 | 8.828644 | CGAGTAGCGATAATGGTTATAGTAGAT | 58.171 | 37.037 | 0.00 | 0.00 | 44.57 | 1.98 |
721 | 1732 | 7.279536 | CCGAGTAGCGATAATGGTTATAGTAGA | 59.720 | 40.741 | 0.00 | 0.00 | 44.57 | 2.59 |
722 | 1733 | 7.279536 | TCCGAGTAGCGATAATGGTTATAGTAG | 59.720 | 40.741 | 0.00 | 0.00 | 44.57 | 2.57 |
723 | 1734 | 7.105588 | TCCGAGTAGCGATAATGGTTATAGTA | 58.894 | 38.462 | 0.00 | 0.00 | 44.57 | 1.82 |
724 | 1735 | 5.942236 | TCCGAGTAGCGATAATGGTTATAGT | 59.058 | 40.000 | 0.00 | 0.00 | 44.57 | 2.12 |
725 | 1736 | 6.432607 | TCCGAGTAGCGATAATGGTTATAG | 57.567 | 41.667 | 0.00 | 0.00 | 44.57 | 1.31 |
726 | 1737 | 6.615088 | GTTCCGAGTAGCGATAATGGTTATA | 58.385 | 40.000 | 0.00 | 0.00 | 44.57 | 0.98 |
727 | 1738 | 5.467705 | GTTCCGAGTAGCGATAATGGTTAT | 58.532 | 41.667 | 0.00 | 0.00 | 44.57 | 1.89 |
728 | 1739 | 4.555313 | CGTTCCGAGTAGCGATAATGGTTA | 60.555 | 45.833 | 0.00 | 0.00 | 44.57 | 2.85 |
729 | 1740 | 3.714391 | GTTCCGAGTAGCGATAATGGTT | 58.286 | 45.455 | 0.00 | 0.00 | 44.57 | 3.67 |
730 | 1741 | 2.287427 | CGTTCCGAGTAGCGATAATGGT | 60.287 | 50.000 | 0.00 | 0.00 | 44.57 | 3.55 |
731 | 1742 | 2.031420 | TCGTTCCGAGTAGCGATAATGG | 60.031 | 50.000 | 0.00 | 0.00 | 44.57 | 3.16 |
732 | 1743 | 3.263602 | TCGTTCCGAGTAGCGATAATG | 57.736 | 47.619 | 0.00 | 0.00 | 44.57 | 1.90 |
733 | 1744 | 3.976793 | TTCGTTCCGAGTAGCGATAAT | 57.023 | 42.857 | 0.00 | 0.00 | 44.57 | 1.28 |
734 | 1745 | 3.763097 | TTTCGTTCCGAGTAGCGATAA | 57.237 | 42.857 | 0.00 | 0.00 | 44.57 | 1.75 |
735 | 1746 | 3.562973 | AGATTTCGTTCCGAGTAGCGATA | 59.437 | 43.478 | 0.00 | 0.00 | 44.57 | 2.92 |
736 | 1747 | 2.358267 | AGATTTCGTTCCGAGTAGCGAT | 59.642 | 45.455 | 0.00 | 0.00 | 44.57 | 4.58 |
737 | 1748 | 1.741706 | AGATTTCGTTCCGAGTAGCGA | 59.258 | 47.619 | 0.00 | 0.00 | 44.57 | 4.93 |
738 | 1749 | 2.190325 | AGATTTCGTTCCGAGTAGCG | 57.810 | 50.000 | 0.00 | 0.00 | 37.14 | 4.26 |
739 | 1750 | 2.603560 | CCAAGATTTCGTTCCGAGTAGC | 59.396 | 50.000 | 0.00 | 0.00 | 37.14 | 3.58 |
740 | 1751 | 4.106029 | TCCAAGATTTCGTTCCGAGTAG | 57.894 | 45.455 | 0.00 | 0.00 | 37.14 | 2.57 |
741 | 1752 | 4.240096 | GTTCCAAGATTTCGTTCCGAGTA | 58.760 | 43.478 | 0.00 | 0.00 | 37.14 | 2.59 |
742 | 1753 | 3.064931 | GTTCCAAGATTTCGTTCCGAGT | 58.935 | 45.455 | 0.00 | 0.00 | 37.14 | 4.18 |
743 | 1754 | 2.415512 | GGTTCCAAGATTTCGTTCCGAG | 59.584 | 50.000 | 0.00 | 0.00 | 37.14 | 4.63 |
744 | 1755 | 2.419667 | GGTTCCAAGATTTCGTTCCGA | 58.580 | 47.619 | 0.00 | 0.00 | 0.00 | 4.55 |
745 | 1756 | 1.467342 | GGGTTCCAAGATTTCGTTCCG | 59.533 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
746 | 1757 | 2.791655 | AGGGTTCCAAGATTTCGTTCC | 58.208 | 47.619 | 0.00 | 0.00 | 0.00 | 3.62 |
747 | 1758 | 3.611766 | GCAAGGGTTCCAAGATTTCGTTC | 60.612 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
748 | 1759 | 2.296190 | GCAAGGGTTCCAAGATTTCGTT | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
749 | 1760 | 1.886542 | GCAAGGGTTCCAAGATTTCGT | 59.113 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
772 | 1783 | 3.947132 | CTGGACCGGCTCTGCACAG | 62.947 | 68.421 | 0.00 | 0.00 | 0.00 | 3.66 |
828 | 1840 | 2.349755 | CGGGGTGGTCATCGGTTT | 59.650 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
954 | 1967 | 3.264845 | TTTGGGGAGGGTGAGGGC | 61.265 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
955 | 1968 | 3.090765 | CTTTGGGGAGGGTGAGGG | 58.909 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1128 | 2141 | 1.737236 | CACGGAATCATCAGCGGAAAA | 59.263 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
1320 | 2334 | 2.435586 | CCTGAACTCAGCCCTGCG | 60.436 | 66.667 | 0.89 | 0.00 | 42.47 | 5.18 |
1399 | 2413 | 1.560505 | AAGCAAAACCCTATGGCAGG | 58.439 | 50.000 | 0.00 | 0.00 | 45.07 | 4.85 |
1402 | 2416 | 3.118775 | CCCTAAAAGCAAAACCCTATGGC | 60.119 | 47.826 | 0.00 | 0.00 | 33.59 | 4.40 |
1403 | 2417 | 4.093743 | ACCCTAAAAGCAAAACCCTATGG | 58.906 | 43.478 | 0.00 | 0.00 | 37.80 | 2.74 |
1404 | 2418 | 5.738619 | AACCCTAAAAGCAAAACCCTATG | 57.261 | 39.130 | 0.00 | 0.00 | 0.00 | 2.23 |
1405 | 2419 | 6.530120 | CAAAACCCTAAAAGCAAAACCCTAT | 58.470 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1724 | 2765 | 8.455903 | ACATCATCCATATTCTAACAAACTGG | 57.544 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
1765 | 2806 | 8.032451 | ACCAACATTATTAATTACACAAGCACC | 58.968 | 33.333 | 0.00 | 0.00 | 0.00 | 5.01 |
1820 | 2861 | 5.565834 | CGGGTGTTATTTTGGTAAGTTGCAT | 60.566 | 40.000 | 0.00 | 0.00 | 0.00 | 3.96 |
1821 | 2862 | 4.261656 | CGGGTGTTATTTTGGTAAGTTGCA | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
1823 | 2864 | 5.692613 | TCGGGTGTTATTTTGGTAAGTTG | 57.307 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
1824 | 2865 | 4.216902 | GCTCGGGTGTTATTTTGGTAAGTT | 59.783 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
1825 | 2866 | 3.754850 | GCTCGGGTGTTATTTTGGTAAGT | 59.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
1844 | 2885 | 5.388243 | GTTAAGGGTAACAGAGCACAGCTC | 61.388 | 50.000 | 10.88 | 10.88 | 42.40 | 4.09 |
1856 | 2897 | 5.121105 | ACGGCATTATCAGTTAAGGGTAAC | 58.879 | 41.667 | 0.00 | 0.00 | 40.05 | 2.50 |
1874 | 2915 | 1.174078 | TGTAACGGAGACTGACGGCA | 61.174 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
1904 | 2945 | 9.274065 | CTAACCTTGCGTGAAATATTTTAGAAC | 57.726 | 33.333 | 1.43 | 0.00 | 0.00 | 3.01 |
1919 | 2960 | 1.975660 | TCCTTTTGCTAACCTTGCGT | 58.024 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
1921 | 2962 | 4.438148 | TGTTTTCCTTTTGCTAACCTTGC | 58.562 | 39.130 | 0.00 | 0.00 | 0.00 | 4.01 |
1935 | 2976 | 6.800890 | AGGGGTAACATATTTCTGTTTTCCT | 58.199 | 36.000 | 0.00 | 0.00 | 39.88 | 3.36 |
1943 | 2984 | 6.102615 | TGGCAGATAAGGGGTAACATATTTCT | 59.897 | 38.462 | 0.00 | 0.00 | 39.74 | 2.52 |
2027 | 3069 | 7.685155 | GCATGCATTAACCAGTTAGGATCAAAT | 60.685 | 37.037 | 14.21 | 0.00 | 41.22 | 2.32 |
2168 | 3211 | 9.429359 | ACTGATATTACTTGAATGCATAGTAGC | 57.571 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
2238 | 3281 | 1.279271 | GTCTTGGCCTTCTTGGAGCTA | 59.721 | 52.381 | 3.32 | 0.00 | 38.35 | 3.32 |
2297 | 3340 | 6.846283 | GCGATGCATAAATTTATATACCTCGC | 59.154 | 38.462 | 24.39 | 24.39 | 0.00 | 5.03 |
2381 | 3431 | 3.017442 | TCGTCCTCCTGTGATAAGACAG | 58.983 | 50.000 | 0.00 | 0.00 | 42.68 | 3.51 |
2391 | 3441 | 2.599408 | TTTACTCCTCGTCCTCCTGT | 57.401 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2432 | 3482 | 3.566273 | CAAACGCTGATTTGCACCA | 57.434 | 47.368 | 0.00 | 0.00 | 33.07 | 4.17 |
2566 | 3616 | 5.533528 | AGGGTTTTAAGCTTTTCTTCGCTAA | 59.466 | 36.000 | 3.20 | 0.00 | 34.96 | 3.09 |
2635 | 3685 | 6.306356 | GCGATTAATAGCAAGCCAACATAATG | 59.694 | 38.462 | 14.80 | 0.00 | 0.00 | 1.90 |
2658 | 3745 | 2.092211 | GGAGAACACAAGACATAACGCG | 59.908 | 50.000 | 3.53 | 3.53 | 0.00 | 6.01 |
2661 | 3748 | 6.483640 | AGTGAAAGGAGAACACAAGACATAAC | 59.516 | 38.462 | 0.00 | 0.00 | 37.05 | 1.89 |
2677 | 3764 | 6.998074 | TCAGAAGCAATAAGAAAGTGAAAGGA | 59.002 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
2701 | 3788 | 3.858503 | GCAAGTTCAGCAAAAGGACCATC | 60.859 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2705 | 3792 | 2.620585 | AGAGCAAGTTCAGCAAAAGGAC | 59.379 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2707 | 3794 | 3.067180 | TCAAGAGCAAGTTCAGCAAAAGG | 59.933 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
2710 | 3797 | 3.282021 | ACTCAAGAGCAAGTTCAGCAAA | 58.718 | 40.909 | 0.00 | 0.00 | 0.00 | 3.68 |
2711 | 3798 | 2.923121 | ACTCAAGAGCAAGTTCAGCAA | 58.077 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
2717 | 3804 | 3.193267 | TGCACAAAACTCAAGAGCAAGTT | 59.807 | 39.130 | 0.00 | 0.00 | 37.32 | 2.66 |
2750 | 3837 | 4.192429 | AGCAATTGGGCACAATCTTAAC | 57.808 | 40.909 | 16.04 | 3.07 | 46.25 | 2.01 |
2783 | 3877 | 0.883833 | CAGACAGCCATTGGTCAACC | 59.116 | 55.000 | 4.26 | 0.00 | 36.50 | 3.77 |
2807 | 3984 | 1.180456 | TGTCCTGGCTGCCAAATGTG | 61.180 | 55.000 | 23.51 | 10.35 | 30.80 | 3.21 |
2814 | 3991 | 0.747283 | CTTCTGATGTCCTGGCTGCC | 60.747 | 60.000 | 12.87 | 12.87 | 0.00 | 4.85 |
2819 | 3996 | 8.970859 | AAATAATTAGACTTCTGATGTCCTGG | 57.029 | 34.615 | 17.16 | 0.00 | 35.21 | 4.45 |
2852 | 4029 | 5.185454 | AGCATCGATTTTTACATCCTGTCA | 58.815 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
2921 | 4107 | 5.178623 | TGAAGTTACCACGCTTCATGTTTAG | 59.821 | 40.000 | 3.24 | 0.00 | 44.01 | 1.85 |
2923 | 4109 | 3.880490 | TGAAGTTACCACGCTTCATGTTT | 59.120 | 39.130 | 3.24 | 0.00 | 44.01 | 2.83 |
2924 | 4110 | 3.472652 | TGAAGTTACCACGCTTCATGTT | 58.527 | 40.909 | 3.24 | 0.00 | 44.01 | 2.71 |
2925 | 4111 | 3.120321 | TGAAGTTACCACGCTTCATGT | 57.880 | 42.857 | 3.24 | 0.00 | 44.01 | 3.21 |
2979 | 4213 | 9.881529 | ATCAATTGTTTCATTGCACAAATTTAC | 57.118 | 25.926 | 5.13 | 0.00 | 36.50 | 2.01 |
2992 | 4234 | 9.174166 | GGTACCTTACACTATCAATTGTTTCAT | 57.826 | 33.333 | 4.06 | 0.00 | 0.00 | 2.57 |
3129 | 4517 | 9.567848 | GTAGATAGTCTTCTTCACTTCTCTTTG | 57.432 | 37.037 | 0.00 | 0.00 | 0.00 | 2.77 |
3186 | 4578 | 6.332735 | AGCTCCCTTTCTTTATGTTTGTTC | 57.667 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
3199 | 4591 | 5.046520 | TCCTCTAGTTGTAAAGCTCCCTTTC | 60.047 | 44.000 | 0.00 | 0.00 | 41.37 | 2.62 |
3202 | 4594 | 4.062490 | TCCTCTAGTTGTAAAGCTCCCT | 57.938 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
3203 | 4595 | 4.820894 | TTCCTCTAGTTGTAAAGCTCCC | 57.179 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
3204 | 4596 | 5.644206 | CCTTTTCCTCTAGTTGTAAAGCTCC | 59.356 | 44.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3221 | 4613 | 5.685728 | ACAGCTATATCCAGTTCCTTTTCC | 58.314 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
3228 | 4620 | 5.303971 | AGCAATGACAGCTATATCCAGTTC | 58.696 | 41.667 | 0.00 | 0.00 | 41.32 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.