>input_sequence_52343
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------------ATGAGGTCCAAGGCCAACGGAGACACCGCGTAAGTCACCCGCTCCCGCTCCCGCTCCCGCTCCCCCGC
CTCCTCTTCCTGCGGGGTTAACGTTCATGGCTTTCGGTCGTACCGACTAACTTGGTCTCCTTTTCCGCTGATGATTCCGT
GGTGCTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGGCCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCC
ACCCCCTTCTTCGCCTTCCTGTAAGCCCTCCCTCCCCGCCTCCTCCCCCAGATCTATTCGTCTCCGTACTCTAATAATTT
TCGAAACTTCGGCCGCAGGGCTGAGTTCAGGCCACAGTACATGGAGAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGA
GTCTCCCACCCTCCTGCCA--------------TAGGGTTTTGCTTTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATTG
CCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTTT-TCTCTCCTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGC
GCAGCATGTCGGATGAGGTTTGTCTGGTTTTTGCGCTACTTATGCAATTTATA-TTGTGGAAAGTTGCTCCGGTG-CCGT
TATACTTGCCACAACTTGCCAAAATACTACT----------AGGTTGTCGTACCTGTTGCGTTAAACAACTAATTTGCAG
TCCGTTGCCCCAAGATGATAACACAGCGAGTCTCCGTTACAATGCCAGTTTGTTAGAATATGGATGATGTTTATATGATT
TTTGCGGTGCTTGTGTAATTAATAATGTTGGTGGATACCTGTCCAGTGCCGTTATATTTGATGCAACTTACCAAAATAAC
ACCCGAGCTGTGCTCTGTTACCCTTAACTGATAATGCCGTCAGTCTCCGTTACAATGTTCTGGCGTTCTAAAATATTTCA
CGCAAGGTTAGCAAAAGGAAAACAGAAATATGTTACCCCTTATCTGCCACTGTCTTGCTGAGCTGTTTAATAACTTT-AG
CGTCTGTTTGGTGAAGGAAAGATGAATTATTTGATCCTAACTGGTTAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATG
GCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGAAGGTAGTGTTATCGCTGCCATGAATCTTGTGACGT
-AAAGCTTATGCTACTATGCATTCAAGTAATATCAGTTTTGGGGTAATAATGTTGTTTTCCATTTTTATCAGGAGAGCAC
TAGCTCCAAGAAGGCCAAGACTGACGCTGACGAAGAAGGTTCTGACGTTGAGGATGATGGCGAGGTATATAAA-TTTATG
CATCGCTTTAGGTGGCATACATTGCAGTGCTGATGGAATTTA---CTT---GTTGCTAACATATGTTTGGCTGTCTTATC
ACAGGAGGACGAGGAGTAA-------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr2A_1_TraesCS2A01G404100
ACTTGAGCTCCTCAACCCCTCTAGCATCAGAGCTCACGCCTGCCGTAAGACCCACCGACCGGCATTGCTGCTAACCATCG
TCTCCCGCCACCCGCGACTGGTGTCGATGCCATGCCAACTCACTTTATCGCCATGTCCTAGTCGTCGTCGTTGATGGTCC
GTCCCCACCTCCCCCAACGTTCCCTCTAAACTCCCTCCTCCACAA--------GCATCCCTAACCCTAACTTAGTCATAT
CCGGTTCATCACCGGTGCCTCCACTCCACCTCGCTCGCTTCCACCGCCAACATCGTGGCCGGCCGTGTCTCCGAGCTCGG
TGGGCAAGGCCTACAATACATGGGAGGGTACCCACAGCCAGTCAATTTTTTATTAAAAAAACAGTTTTTTAAGGCAAGAT
AGCCAGCCAGCTCGGCCAGAGCGG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CAAAATTTGCGCCGGGCTGCTCCTACTCGGG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ACAAAATCTTTTTTTGAAGATCAGTACGGATACAAGCGCTCATATATATGCGCATGCACTCAC
TCCTATGAACGCACACACCCACACCCTATGAGCATATCCGAGAGACTGAGCCGATATATCATCTTGAGATTTTAAGAAGT
CACCGTAACGCCTCGTAGTCGACGAGAACCTCTTCTTTCATTGAACACGTATCACCGAAAATCATGAAATAGATTTAAGA
TAAATGCAAGCACGAGGACTTAAATCCTGATGGGCCGGAATACCATTGCCATCTACTATAACCATTATCGCTACTCGGAA
CGAAATCTTGGAACCCTTGCAACT-GTGCAGAGCCGGTCCAGTTTCTCTCGGCCCAGTGCCCAGGTTTCCACCGATCGCA
AACCGATGACCACCCCGCAACGCGGCCACTCCACGCCCACACGTCGCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCC-
ATTCCCTCCGCTCCCCACTCCGCAGCAGTTCCGCACCGACGCCCTCGCCCTCACCCTCCCCAAAGCCCTAACCGCTCGCC
CGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAAGTCACCCGCTCCCGCTCCCGCTCCCGCTCCCCCGC
CTCCTCTTCCTGCGGGGTTAACGTTCATGGCTTTCGGTCGTACCGACTAACTTGGTCTCCTTTTCCGCTGATGATTCCGT
GGTGCTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGGCCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCC
ACCCCCTTCTTCGCCTTCCTGTAAGCCCTCCCTCCCCGCCTCCTCCCCCAGATCTATTCGTCTCCGTACTCTAATAATTT
TCGAAACTTCGGCCGCAGGGCTGAGTTCAGGCCACAGTACATGGAGAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGA
GTCTCCCACCCTCCTGCCA--------------TAGGGTTTTGCTTTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATTG
CCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTTT-TCTCTCCTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGC
GCAGCATGTCGGATGAGGTTTGTCTGGTTTTTGCGCTACTTATGCAATTTATA-TTGTGGAAAGTTGCTCCGGTG-CCGT
TATACTTGCCACAACTTGCCAAAATACTACT----------AGGTTGTCGTACCTGTTGCGTTAAACAACTAATTTGCAG
TCCGTTGCCCCAAGATGATAACACAGCGAGTCTCCGTTACAATGCCAGTTTGTTAGAATATGGATGATGTTTATATGATT
TTTGCGGTGCTTGTGTAATTAATAATGTTGGTGGATACCTGTCCAGTGCCGTTATATTTGATGCAACTTACCAAAATAAC
ACCCGAGCTGTGCTCTGTTACCCTTAACTGATAATGCCGTCAGTCTCCGTTACAATGTTCTGGCGTTCTAAAATATTTCA
CGCAAGGTTAGCAAAAGGAAAACAGAAATATGTTACCCCTTATCTGCCACTGTCTTGCTGAGCTGTTTAATAACTTT-AG
CGTCTGTTTGGTGAAGGAAAGATGAATTATTTGATCCTAACTGGTTAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATG
GCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGAAGGTAGTGTTATCGCTGCCATGAATCTTGTGACGT
-AAAGCTTATGCTACTATGCATTCAAGTAATATCAGTTTTGGGGTAATAATGTTGTTTTCCATTTTTATCAGGAGAGCAC
TAGCTCCAAGAAGGCCAAGACTGACGCTGACGAAGAAGGTTCTGACGTTGAGGATGATGGCGAGGTATATAAA-TTTATG
CATCGCTTTAGGTGGCATACATTGCAGTGCTGATGGAATTTA---CTT---GTTGCTAACATATGTTTGGCTGTCTTATC
ACAGGAGGACGAGGAGTAAATAGTAGATGAGGGAACAGCAGTGGTGCAAATCAGCGTTTGCTGCTTAGGGTTTAGCTTGC
CATGTCGATGTCCTCATTATGTAATGTTATGTAAGGAGAATGTTTAGATGCGTACTCCTGGGCTGTGGCATGCTAGAGAT
GTCTCTGTTTGACTATTAGCGAAGAAAAGCTTAAAACCCTTGACTGCTTTTCTTTCTTGGACTTCCACAGCATGTGGAAA
CAGTCATTA-------------------------------------TGTTGGCTTGCTATTAATCGCGTTATGTCTTGTG
TTCTCCTTTCACTTTCTTATTGCTTCTGATGGTCCTTTTGCTGAACTTGCTCTTGAGTTTTGTGCAGCAATTTTTTG---
----TTAAGATTGTGCCCAATTGCTTTCTCCTCCGTGGTTGACCAATGGCTGTCTGTTCT--------------------
---------------------------------------------------------------CACATTTGGCAGCCAGG
ACATCAGAAGTCTAATTATTTTTTACTTTGACAGGATGTAAAAATCGATGCTAGTTGCCGGCTTGCCGCTGGTGGTTGTG
TGACT---------ATAGTGCAGCTTCTAAACATGAAGCGTGGTA-----------------------------------
-------------ACTTCATCAGATTCAAACATATTAAGTTTGCCCATGTATGT--------AAATTTGTGCAATGAAAC
AATTGATAGTGTAAGGTACCCTCTGTATGCTATCTACAACAAAATCATTTTAAGGCGGGGCTACATAATGTTCCACACAC
GTGAGGTG------------------------------------------------------------------------
--------------------------------------------------------------------------AACTTG
AACATGGCGGTAACCTGTCAAGAACCTTAGCGAGTGCAAAGAGAAGTGAAGAAGACTATCTACAGCTGACCCCATGG---
-TGCAGTTGGCCATCTCGAACAAACATAAAGAAAGGGAGCTTTACAACTAGAGGAAAAGGAACTGGATATAGCTGTCATT
GCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCGCCATTGACGAGAAGGATTGAGCACCATGAGCC
ATGTCTGCGGACCGAAGATTAATGCCCTGCAGGAAGCACATTTGTACATGTTAATGCCCTTTCAGGTTTATGCAGGATGT
T
>chr2D_1
ACTTGAGCTCCTCACCCCCTCCAGCATTGGCGCTTACGCCTGTCGTAAGACCTACCGACCGACATTGCCCCTAACCATCA
TTTCCCGCCACCCGC-------GTCGATGCCATGCCAACTCACTGCATAGCCATGTCCTAGTCGTTGTCGTTGATGGTCT
GTCCCCACCTCCCCCAACGTTCCCTCCAAACTCCTTCCTTCGCAAGCTCTTATGCATCCCTAACCCTAACTTAGTTATAT
CCGCTTCATCGCCGGTGCCTCCACCCCCCTCGCTTGT-TTCCACCGCCAACATCGTGGTCGACCGCGTCTCCGAGCTCGG
TTGGCCAGGCCTACAATACATGGGAGGGTACCCACAAGCAGTCAGTTT--------------AGTTTTTTTAGG---GAT
AGCCAGCCAGCTCAGCAAGTTTTTTTTGAGGGAGCCAGCTCAGCCAACTTTTTTTAGAAACACCTGCAACTTTATTCATA
CTCATACAAATTACAGGTACACTGATTTAGACCTAACATCCAAGAAAAATACGAAGTAACTCATATGACTAAGAATTATA
ATGAAATCTTTTATAAACACCTTCTTCGCGGTATCAATCCCCGCTTCGAAGAAATACTTCAGAGACTTCGATAAAGAGGC
TGCAATTAGACTGGAGCAACGATATTGTCATTCTTTCACCCGCACGAACATTACCAATAATGGTTTTTGAAAGCGCCTTG
AGTCGCCCATCCAAAAAGATGGGAAGCCTTAATCGATGAACGTACTTGGACCGAGGATGATCCCCTAGAAGTGCAGGCCG
CCGAATCACAATATCTTCACCATGGTGTCGATGAAAGATTTCAACTCCACAAAGAACCAAACCAAGAAAAAAGTTTGACA
CACCAACATAAACTCATTAGATCCGAATAATCGGATCTGTTAGGACAGAAAACTCTCTAACCTTATGGCTCTGCCAAAAA
ATAAGAGTAAATTTTATTCTCACACGATAATCACTAGACGATGACGGAGAATATAAAGTTCTTGAAGATGAAAGGTCGCC
CACCTCTCAACGCCAAAATTTGCGCCGGGCTGCTCCTACTCGGAGCGAAGGCCTTCTTTGGTTTGGAGGAATTTTATAGG
ATATATTTTTTATAGGAATTTTTCCTTTAGAGCCCTTTGGTTCAGAGAAATGGATTACTATTCCTACATATGATTGATTC
ATATCCTCCACATTCCAAAGAAAAATAAACATGAGCCTATACACAATGGAAAAATTTCTATGATGCGAATCAAATGACAT
ATCTTTTCCTATACTCATAAAATTTGTGATACATGTCATCTTATTTTCTACTCCTCCCGTTCCTAAATATAAGTCTTTGT
AGAGATTTCACTATGGACTACATACGAAGCAAAATGTCTGAATCTATACTCTAAAATGCATCTACATACATTCGTATGTG
ATTCATAGTGAAACTCTACAAAGACTTATATTTAGGAACGGAGGGAGTATAAGTTTTTTATTCTTATGATAATCCAAAGA
GGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGAAATCTTGGAACCCTTTGCGAGCGTGGAGAGCCGGTCCAGTTTCTCTCGGCCCAGTGCCCAGGTTTCCACCGATCGC-
AACCGATGACCACCCCCCAACGCGGCCACTCCACGCCCACACGTCGCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCCC
ATTCCCTCCGCTCCCCAGTCCGCAGCAGTTCCGCACCGACGCCCT---CCTCACCCTCCCCAAAGCCCTAACCGCTCGCC
CGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAAGTCACCC------------GCTCCCGCTCCCCCGC
CCCCTCTTCCGGCGCGGTTAACGTTCATGGCTCTCGGTCGTACCGACTAACCTGGTCTCCGTTTCCGC---TGATTCCGT
GGTGGTGCGGTTGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGGCCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCC
ACCCCTTTCTTCGCTTTCCTGTAAGCCCTCCCTCCCCGCCTCCTCCCCCAGATCTATTCCTCTCCGTACTCTAATAATTT
TCGAAACTTCGGCGGCAGGGCTGAGTTCAGGCCACAGTACATGGAGAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGA
GTCTCCCACCCTTC-----TGCCAGTTTGCTTCTAGGGTTTTGCTTTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATGG
CCCATGGCTCATAAGCGTGTGCATGTGCTGCTTGTTTATTTT-TCCTTCTAGGTTACCAAGGCGGCCGGGGAGAAGTGGC
GCAGCATGTCGGATGAGGTTTGTCTGGTTTTTGCACTGCTTATGCAATTTATATTTGTGGAAAGTTGCTCCTGTG-CCGT
TATACTTGCCACATCTTGCCAAAATACTACT----------AGGTTGTCGTACCTGTTGCGTTAAACAACTAATTTGCAG
TCCGTTGCCCCAAGATGATAACACAGCGAGTCTCCGTTACAATGTCAGTGTGTCGGAATATGGATGATGTTTATATGATT
TTTGCAGTGCTTGTGTAATTAATAATGTTGGTGGATACCTGTGCAGTGCTGTTATATTTGCCG---CTTACCAAAATAAC
ACCCAAGCTGTGCTCTATTACCCTTAACTGA--ACGCCGTCAGTCTCCGTTACAATGTTCTGGCTTTCTAAAATATTTCG
CTCAAGGTTAGCAAAGGGAAAACGGAAATATGTTACCCCTTATCTGCCACTGTCTTGCTGAGCTGTTTAATAAGTTT-AG
CGTCTGTTTGGTGAAGGAAAGATGAATTGTTTGATGCTAACTGGTTAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATG
GCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGTGGTGAACAAGAAGGTAGTGTTATCGCTGCCAAGAATCTTGTGACGT
-AAAGCTTATACTGCTATGCATTTAAGTAATATCAGTTTTGGGGTAATAATGTTGTTTTCCATTTTTATCAGGAGAGCAC
CAGCTCCAAGAAGGCCAAGACTGACGCTGACGAAGAAGGTTCTGACGTTGAGGATGATGCCGAGGTATATAAAATTTATG
CATCGCTTTAGGTGGCATACATTGCAGTGCTGATGGAATTTACTTCTT---GTTACTAACATATGTTTGGTTGTCTTATC
GCAGGAGGACGAGGAGTAAATAGTAGATGAGGGAACAGCAGCGGTGCAAATCAGCGTTTGCTGCTTAGGGTTTAGCTTGC
CATGTCGATGTCCGGATTATGTAATGTTATGTAAGGAGAATGTTTAGATGCGTGCTCCTGGGCTGTGGCATGCTGGAGAT
GTCTCTGTTTGACTAGTAGCGAAGAAAAGCTTAAAACCCTT-ACTGCTTTTCTTTCGTGGACCTCCACAGCATGTGGAAA
CAGTTATTATGCTTGCTTTTATCTACTGATCTGATGACTAGCCTGCTGTTGGCTTGCTATTAATTGCTTTATGTCTTGTG
TTCGCCTTTCACTTTCTTATTGCTTCTCA---TTTTCCTGCTGCACTTGCTCTCGAGTTTTGTGCAGCAATTTTTTAATA
TTTATTAAGGTTGTGCCCAATTGATTTCTCCTCTGTAGTTGACCAATGGCTG--TGTTCT--------------------
---------------------------------------------------------------AACATTTTGCAGTCAGG
ACATCAGAAGT--AATTTTATTTTATTTCGACAGGATGTAAAAATCGATGCTAGTTGCTGGCTTGACGCTGGTGGTTGTG
TGACTTGTGTTAGCATAATGCAGTTTTTTTTTTTGCGAGAAAATTTCCGTTCTGTTAATGGCAGTACAACGAAAATCAGA
AATAATAGAAATTACTTCATCAGATTCAAACACGTTAAGTTTGCCCATGTATTCTACAATCCAAATTTGTGCAGTGAAAC
AATTGGTGGTATAAGGTACCCTCTGTTTGCTATCTACAACAAAATCATTTTAAGGTGGCACTACATAATGTTCCACACAC
GTGAGGTG------------------------------------------------------------------------
--------------------------------------------------------------------------AACTTG
AACATGGCGGTAACCTGTCAAGAACCTTAGCGAGTGTAAAGAGAAGTGAAGAAGACTATCTACAGCTGACCCCATGGCAA
GTGCAGTTGGGTATCTCAAACAAACATAAAAAAGA-GAGCTTTACAACTAGACGAAAAGCAACTGCATGTAGCTGTCTTC
GCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCGCCATCGACGAGAAGGATTGAGCGCCATGAGCC
ATGTCTGCGGACCGAAGATTAATGCCCTGCAGGAAGCACATTTGTAAATGTTAACGCCCTTTCAGGTTTGTGCAGAATGT
T
>chr2B_755
--------------------------------------------------------------------------------
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----ATCTTGAAACCCTCGCAAAT-GTGCAGGGCCGGTCCAGTTTCTCTCGGCCCAGTGCCCAGGTTTCCAGCGATCGC-
AACCGATACCA--CCCCCAACGCGGCCACTCCACGCCCACACGTCGCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCC-
ATTCCCTCCGCTTCCCAGTCCGCAGCAGTTCCGCACCGACAC------CCTCACCCTCCCCAAAGCCCTAACCGCTCGCC
CGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAAGTCACCT------------GCTCCCGCTCCCCCGC
CTCCTCTTCCTGCAGGGTTAACGTTCATGGCTTTCGGTCGTACCGACTATCTTGGTCTCCGTTTCCGCTGATGATTCCGT
GGTGGTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGGCCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCC
ACCCCCTTCTTCGCCTTCCTGTAAGCCCTCACTCCCCGCCACCTCCCCCAGATCTGTTCGTCTCCGTACTCTAATATGTT
TTGAAACTTCGGCGGCAGGGCTGAGTTCAGGCCACAGTACATGGAGAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGA
GTCTCCCACTCTTCTCTTTTGCCAGTTTGCTTCTAGGCTTTTGCTTTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATGG
CCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTCTCTCTCTCCTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGC
GCAGCATGTCGGATGAGGTTTGTCTGGTCTTTGCGCTGCTTATGCAATTTATATT-GTGGAAACTTGCTCCGGTGCCCGT
TATACTTGCCACAACTTGCCAAAATACTACTCCGGAGTACTAGGTTGTCGCACCCGTTGTGTTAAATAACTAATTTTCAG
TCCGTTGCCCCAAGATGATAACACAGCGAGTCTCGGTTACAATGTCAGTGTGTCAGAATACGGATGATGTTTATATGATC
TTTGGAGTGCTTGTGTAATTAATAATGTTGTTGGATACCTGTCCAGTGCCGTTATATTTGCCG---CTTACCAAAATAAC
ACCCAAGCTGTGCTCTATTACCCTTAACTGATAACGCTGTCAGTCTCTGTTACAATGTTCTGGCTTTCTAAAATATTTCG
CTCGAGGTTAGCAAAGGGAAAACGGAAATATGTTACCCCTTATCTGCCACTGTCTTGCTGAGCTGTTTAATAACTCCAAG
CGTCTGTTTGGTGAAGGAAAGATGAATTGTTTGGTCCTAACTGGTTAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATG
GCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGAAGGTAGTGTTATCGCTGCCATGAATCTTGTGAAGT
AAAAGCTTATACTGCTATGCATTTAAGTAATATCAGTTTTGGGGTAATAATGTTGTTTTCCATTTTTATCAGGAGAGCAC
CAGCTCCAAGAAGACCAAGACTAACGCTGACGAAGAAGGTTCTGACGTTGAGGATGATG---AGGTATATAAAATTTATG
CATCGGTTAAGGTGGCATAAATTGCAGTGCTGATGGAATTTA---CTTCTTGTTGCTAACATATGTTTGCTTGTCTTATC
GCAGGAGGATGAGGAGTAAATAGTAGATGAGGGAACAGCAGCGGTGCAAATCAGCGTTTGCTGCTTAGGGTTTAGATTGC
CATGTCGATGTCCGGATTATGTAATGTTATGTAAGGAGAATGTTTAGATGCGTACTCCTGGGCTGTGGCATGCTGGAGAT
GTCTTTGTTTGAC--------AAGAAAAGCTTAAAACCCTTGACTGCTTTTCTTTCGTGGATTTCCACAGCATGTGGAAA
CAGTTATTATGCTTGCTTTTATCTACTGATCTGATGACTAGCCTGCTGTTGGATTGCTATTAATTGCTTTATGTCTTGTG
TTCGCCTTTCACTTAT-------------TGCTTCTCCTGCTGCACTTGCT--TGAGTTTTGTGCAGCAAA-TTTTACTA
TTTATTAAGATTGTGTCCAATTGCTTTTTCCTCTGTAGTTGACCAATGGCCATCTGTTCTACTCCCTCCGTCTCATAATG
TAAGATGTTTTTTGACACTAAACTAGTGTAAAAAAACGTCTTACATTATGGGACGGAGGGAGTAACATTTTGCAGTCAGG
AACGGAAGTTTTTTTTC---TTCTACTTAGACAGGATGTAAAAATCGATGCCAGTTGCTGGCTTGCCGCTGGTGGTTGTG
TGACTTGTGTTAGCATAGTGCAGC-------CATGAAGCGTGGTATTAT-------------------------------
--------------CTTCATCAGATTCAAACACGTTAAGTTTGCCCATGTATTCTTCAATCCAAATTTGTGCAGTGAAAC
AATTGATGGTGTAAGGTACCCTCTGTTTGCTATCTACAACAAAATCATTTTAAGGCAGCGCTGCATAATGTTCCACACGC
GTGAGGTGAACTTGAACCGGAACTACTTGACGGACGATTTTTTGTTGAACGACGCATGCACGATAGCTGATCCAAGCGCC
TACGGCTGCTCAGACTTGCCAGTGGATGGTTTGTGATGCAGTGTCGTGCAAGCGTCGTGTGTGTAGCACTGCTCAACTTG
AACATGGCAGTAACCTGTCAAGAACCTTAGCAAGTGTAAAGAGAAGTGAAGAAGACTATCTACAGCTGACACCATGGCAA
GTGCAGTTGGCCATCTCAAACAAACATAAAAA--A-GAGCTTTATAACTAGACGAAAAGCAACTGCATATAGCTGCCATT
GCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCGCCATTGACGAGAAGGATTGAGCACCATGAGCC
ATGTCTGCGGACTGAAGATTAATGCCCTGCAGGAAGCACATTTGTACATGTTAATGCCCTTTCAGGTTTATGCAGAATGT
T
>SNPs
--------------S------S-----SS-S---S-------S---------S--------S------SS---------S
-S-------------SSSSSSS----------------------SS--S----------------S-------------S
--------------------------S-------S----S-S---------------------------------S----
---S------S-------------S--S-SSSSS-SSS--------------------S--S---S--------------
-S---S------------------------------SS------S---SSSSSSSSSSSSSS--------S---SSS---
-------------S--S--SSSSS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
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----------------------SS---S-S--S-S--S-S-SSS-SS--S---SSS-SSSS-S-SSSSSS-SS-SSSSSS
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------------------S--------------------------------------------------------S
----------------S---------------------------------------------------------------
-----------------S---------------------------SSS--------------------------------
----------------------------------------------------SSSSSSSSSSSS----------------
------------------------------------------------------------S-------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------S--SSSS-----------------------------------------------------------S-
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S----S---S--------------------------
-----S------------------------------------------------------SS-SSS--------------
----S-----------S-----------------S-----------------------------S--------------S
-S-------------S-------S--------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
----------S--S---------S--------------------------------------------------------
S----------------------------------------------------------S--------------------
----------------------------------------------------------------------S---------
S----------------------------------------S--------------------------------------
-------------SS-----------------------------------------------------------S-----
---------------S----------------------------------------S-----------------------
----S-----------------------------------------------------------S--S------------
---S-----------------------S---S-S--SS-----S--------------------------------S---
---------------------------------S--S-------------------------------------------
---------------------------------------------------------------S------S----S----
-----------S-----S-S--------S-----------------------------S---------------------
--------------------------S-SSS-------------------------------------------------
--------------------------------SS------------------SS-------------------S------
-------S------------------S-------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------S------------S--SSS----------------S------S-----S--------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-
>forward_1540
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TCCTATGAACGCACACACCC------------------------------------------------------------
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-
>reverse_2915
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------TGCCGTCAGTCTCCGTTACA--------------------------
--------------------------------------------------------------------------------
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-
>forward_1543
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TATGAACGCACACACCCACA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-
>reverse_3281
--------------------------------------------------------------------------------
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TAGCTCCAAGAAGGCCAAGAC-----------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_1575
--------------------------------------------------------------------------------
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-----------------------------------ATCCGAGAGACTGAGCCGAT-------------------------
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-
>reverse_3441
--------------------------------------------------------------------------------
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ACAGGAGGACGAGGAGTAAA------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>forward_1614
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------AGAAGT
CACCGTAACGCCTC------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_3482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TGGTGCAAATCAGCGTTTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
