Multiple sequence alignment - TraesCS2A01G396400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G396400 chr2A 100.000 4212 0 0 1 4212 650242627 650246838 0.000000e+00 7779.0
1 TraesCS2A01G396400 chr2B 91.033 3803 201 60 89 3857 592801145 592804841 0.000000e+00 5005.0
2 TraesCS2A01G396400 chr2D 90.510 3667 180 64 206 3836 505813703 505817237 0.000000e+00 4689.0
3 TraesCS2A01G396400 chr4A 80.128 156 26 5 1016 1168 568192931 568193084 1.240000e-20 111.0
4 TraesCS2A01G396400 chr4D 79.730 148 28 2 1020 1166 34089090 34089236 5.760000e-19 106.0
5 TraesCS2A01G396400 chr4B 78.571 154 28 5 1016 1166 48991622 48991773 3.470000e-16 97.1
6 TraesCS2A01G396400 chr3B 82.051 117 15 5 1048 1161 99500818 99500931 1.250000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G396400 chr2A 650242627 650246838 4211 False 7779 7779 100.000 1 4212 1 chr2A.!!$F1 4211
1 TraesCS2A01G396400 chr2B 592801145 592804841 3696 False 5005 5005 91.033 89 3857 1 chr2B.!!$F1 3768
2 TraesCS2A01G396400 chr2D 505813703 505817237 3534 False 4689 4689 90.510 206 3836 1 chr2D.!!$F1 3630

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 678 0.034337 TCACGGAAGTTTCTTCCCCG 59.966 55.0 18.91 13.19 46.40 5.73 F
953 963 0.105760 TCCCATCCTCTGCCTCTCTC 60.106 60.0 0.00 0.00 0.00 3.20 F
2182 2232 0.172578 TTCATCAGGCCTGACGTACG 59.827 55.0 37.39 21.78 43.11 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2120 2170 0.583083 CGTACGTTGTTGCGCTATGC 60.583 55.0 9.73 0.00 46.70 3.14 R
2905 2955 0.659957 GCTTCACCTTGCGGATGATC 59.340 55.0 0.00 0.00 0.00 2.92 R
4022 4085 0.030908 GCTATTCCCTCACGTCGGAG 59.969 60.0 0.00 0.42 34.62 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 6.704512 AAAAATCACGTTATGTCATTTGGC 57.295 33.333 0.00 0.00 0.00 4.52
40 41 5.643379 AAATCACGTTATGTCATTTGGCT 57.357 34.783 0.00 0.00 0.00 4.75
41 42 5.643379 AATCACGTTATGTCATTTGGCTT 57.357 34.783 0.00 0.00 0.00 4.35
42 43 6.751514 AATCACGTTATGTCATTTGGCTTA 57.248 33.333 0.00 0.00 0.00 3.09
43 44 5.794687 TCACGTTATGTCATTTGGCTTAG 57.205 39.130 0.00 0.00 0.00 2.18
44 45 5.483811 TCACGTTATGTCATTTGGCTTAGA 58.516 37.500 0.00 0.00 0.00 2.10
45 46 5.350365 TCACGTTATGTCATTTGGCTTAGAC 59.650 40.000 0.00 0.00 0.00 2.59
46 47 5.351465 CACGTTATGTCATTTGGCTTAGACT 59.649 40.000 0.00 0.00 32.41 3.24
47 48 5.938125 ACGTTATGTCATTTGGCTTAGACTT 59.062 36.000 0.00 0.00 32.41 3.01
48 49 6.128282 ACGTTATGTCATTTGGCTTAGACTTG 60.128 38.462 0.00 0.00 32.41 3.16
49 50 6.092122 CGTTATGTCATTTGGCTTAGACTTGA 59.908 38.462 0.00 0.00 32.41 3.02
50 51 7.201644 CGTTATGTCATTTGGCTTAGACTTGAT 60.202 37.037 0.00 0.00 32.41 2.57
51 52 8.462016 GTTATGTCATTTGGCTTAGACTTGATT 58.538 33.333 0.00 0.00 32.41 2.57
52 53 9.679661 TTATGTCATTTGGCTTAGACTTGATTA 57.320 29.630 0.00 0.00 32.41 1.75
53 54 7.994425 TGTCATTTGGCTTAGACTTGATTAA 57.006 32.000 0.00 0.00 32.41 1.40
54 55 8.044060 TGTCATTTGGCTTAGACTTGATTAAG 57.956 34.615 0.00 0.00 39.86 1.85
68 69 6.153067 ACTTGATTAAGTCTCAGTTCACTCG 58.847 40.000 0.00 0.00 43.53 4.18
69 70 5.959618 TGATTAAGTCTCAGTTCACTCGA 57.040 39.130 0.00 0.00 0.00 4.04
70 71 6.516739 TGATTAAGTCTCAGTTCACTCGAT 57.483 37.500 0.00 0.00 0.00 3.59
71 72 7.625828 TGATTAAGTCTCAGTTCACTCGATA 57.374 36.000 0.00 0.00 0.00 2.92
72 73 8.051901 TGATTAAGTCTCAGTTCACTCGATAA 57.948 34.615 0.00 0.00 0.00 1.75
73 74 8.184848 TGATTAAGTCTCAGTTCACTCGATAAG 58.815 37.037 0.00 0.00 0.00 1.73
74 75 7.683437 TTAAGTCTCAGTTCACTCGATAAGA 57.317 36.000 0.00 0.00 0.00 2.10
75 76 6.767524 AAGTCTCAGTTCACTCGATAAGAT 57.232 37.500 0.00 0.00 0.00 2.40
76 77 6.371809 AGTCTCAGTTCACTCGATAAGATC 57.628 41.667 0.00 0.00 0.00 2.75
77 78 6.119536 AGTCTCAGTTCACTCGATAAGATCT 58.880 40.000 0.00 0.00 0.00 2.75
78 79 6.038161 AGTCTCAGTTCACTCGATAAGATCTG 59.962 42.308 0.00 11.02 0.00 2.90
79 80 5.298026 TCTCAGTTCACTCGATAAGATCTGG 59.702 44.000 0.00 9.14 0.00 3.86
80 81 4.950475 TCAGTTCACTCGATAAGATCTGGT 59.050 41.667 0.00 0.00 0.00 4.00
81 82 5.066634 TCAGTTCACTCGATAAGATCTGGTC 59.933 44.000 0.00 0.00 0.00 4.02
82 83 4.950475 AGTTCACTCGATAAGATCTGGTCA 59.050 41.667 0.00 0.00 0.00 4.02
83 84 4.902443 TCACTCGATAAGATCTGGTCAC 57.098 45.455 0.00 0.00 0.00 3.67
84 85 4.270008 TCACTCGATAAGATCTGGTCACA 58.730 43.478 0.00 0.00 0.00 3.58
85 86 4.889995 TCACTCGATAAGATCTGGTCACAT 59.110 41.667 0.00 0.00 0.00 3.21
86 87 5.009110 TCACTCGATAAGATCTGGTCACATC 59.991 44.000 0.00 0.00 0.00 3.06
87 88 4.279671 ACTCGATAAGATCTGGTCACATCC 59.720 45.833 0.00 0.00 0.00 3.51
99 100 3.118775 TGGTCACATCCTAGTTTGATCGG 60.119 47.826 0.00 0.00 0.00 4.18
118 119 2.198969 TGCGGCCAAATTGCAGACA 61.199 52.632 2.24 0.00 34.03 3.41
125 126 2.472488 GCCAAATTGCAGACAAGTTTCG 59.528 45.455 0.00 0.00 41.00 3.46
130 132 1.220529 TGCAGACAAGTTTCGAGCAG 58.779 50.000 0.00 0.00 30.93 4.24
136 138 4.391216 CAGACAAGTTTCGAGCAGATTCAT 59.609 41.667 0.00 0.00 0.00 2.57
150 152 4.856664 CAGATTCATTCCTGCAAGCATAC 58.143 43.478 0.00 0.00 0.00 2.39
151 153 3.562973 AGATTCATTCCTGCAAGCATACG 59.437 43.478 0.00 0.00 0.00 3.06
184 186 6.198216 GCAAAATTAACTGCTGTTTTCTCGAA 59.802 34.615 14.54 2.15 37.59 3.71
185 187 7.547119 CAAAATTAACTGCTGTTTTCTCGAAC 58.453 34.615 14.54 0.00 37.59 3.95
187 189 1.594331 ACTGCTGTTTTCTCGAACCC 58.406 50.000 0.00 0.00 0.00 4.11
188 190 1.141053 ACTGCTGTTTTCTCGAACCCT 59.859 47.619 0.00 0.00 0.00 4.34
189 191 1.801178 CTGCTGTTTTCTCGAACCCTC 59.199 52.381 0.00 0.00 0.00 4.30
191 193 1.809684 CTGTTTTCTCGAACCCTCCC 58.190 55.000 0.00 0.00 0.00 4.30
192 194 1.071699 CTGTTTTCTCGAACCCTCCCA 59.928 52.381 0.00 0.00 0.00 4.37
193 195 1.491332 TGTTTTCTCGAACCCTCCCAA 59.509 47.619 0.00 0.00 0.00 4.12
194 196 2.107552 TGTTTTCTCGAACCCTCCCAAT 59.892 45.455 0.00 0.00 0.00 3.16
195 197 3.154710 GTTTTCTCGAACCCTCCCAATT 58.845 45.455 0.00 0.00 0.00 2.32
196 198 3.518992 TTTCTCGAACCCTCCCAATTT 57.481 42.857 0.00 0.00 0.00 1.82
197 199 4.644163 TTTCTCGAACCCTCCCAATTTA 57.356 40.909 0.00 0.00 0.00 1.40
198 200 4.855298 TTCTCGAACCCTCCCAATTTAT 57.145 40.909 0.00 0.00 0.00 1.40
199 201 4.855298 TCTCGAACCCTCCCAATTTATT 57.145 40.909 0.00 0.00 0.00 1.40
200 202 4.523083 TCTCGAACCCTCCCAATTTATTG 58.477 43.478 0.00 0.00 37.52 1.90
201 203 4.018779 TCTCGAACCCTCCCAATTTATTGT 60.019 41.667 2.13 0.00 36.06 2.71
202 204 4.013728 TCGAACCCTCCCAATTTATTGTG 58.986 43.478 2.13 0.00 36.06 3.33
203 205 3.130340 CGAACCCTCCCAATTTATTGTGG 59.870 47.826 2.13 3.48 36.06 4.17
278 280 4.821589 GCCGGTTGCGCTAGCTCT 62.822 66.667 18.22 0.00 45.42 4.09
279 281 2.583593 CCGGTTGCGCTAGCTCTC 60.584 66.667 18.22 2.36 45.42 3.20
280 282 2.492090 CGGTTGCGCTAGCTCTCT 59.508 61.111 18.22 0.00 45.42 3.10
374 378 4.210304 GCACGCCGCAGATCGAAC 62.210 66.667 0.00 0.00 41.67 3.95
436 441 3.179265 CGCTCGCCTGTTGGTACG 61.179 66.667 0.00 0.00 35.27 3.67
487 492 3.338126 ATCGTCAGGTCACGTCGCC 62.338 63.158 0.00 0.00 40.79 5.54
512 517 3.677121 CCTTGGATCGCAGATATTCTTCG 59.323 47.826 0.00 0.00 45.12 3.79
513 518 3.303881 TGGATCGCAGATATTCTTCGG 57.696 47.619 0.00 0.00 45.12 4.30
522 527 6.151144 TCGCAGATATTCTTCGGAGATCAATA 59.849 38.462 0.00 0.00 34.04 1.90
530 535 5.059161 TCTTCGGAGATCAATAAGCCAATG 58.941 41.667 0.00 0.00 35.04 2.82
534 539 4.763793 CGGAGATCAATAAGCCAATGGATT 59.236 41.667 8.21 8.21 34.82 3.01
535 540 5.939883 CGGAGATCAATAAGCCAATGGATTA 59.060 40.000 12.71 12.71 37.97 1.75
589 594 2.056223 TAGAAGGAAGGACGGGCGG 61.056 63.158 0.00 0.00 0.00 6.13
673 678 0.034337 TCACGGAAGTTTCTTCCCCG 59.966 55.000 18.91 13.19 46.40 5.73
749 754 2.743718 CTGTCCCTTGACCTGCGT 59.256 61.111 0.00 0.00 41.01 5.24
750 755 1.374758 CTGTCCCTTGACCTGCGTC 60.375 63.158 0.00 0.00 41.01 5.19
810 815 6.073222 CCACGAATCTATAAATAGGCACCAAC 60.073 42.308 0.00 0.00 0.00 3.77
911 916 3.658757 AGAAGCTTCATCGGCTAGATC 57.341 47.619 27.57 0.00 39.30 2.75
937 947 3.217626 CATAACATTCTTGGCCTCTCCC 58.782 50.000 3.32 0.00 0.00 4.30
946 956 2.817056 GGCCTCTCCCATCCTCTGC 61.817 68.421 0.00 0.00 0.00 4.26
947 957 2.817056 GCCTCTCCCATCCTCTGCC 61.817 68.421 0.00 0.00 0.00 4.85
953 963 0.105760 TCCCATCCTCTGCCTCTCTC 60.106 60.000 0.00 0.00 0.00 3.20
963 973 2.102420 TCTGCCTCTCTCTCTCTACTCG 59.898 54.545 0.00 0.00 0.00 4.18
989 1009 2.108168 CTACCAGATCCTCGGAAACCA 58.892 52.381 0.63 0.00 0.00 3.67
1026 1046 1.591059 CAGATCCGCCGAGCTTCTG 60.591 63.158 0.00 0.00 30.45 3.02
1171 1194 1.200716 CCGAGAACCAAGTACGTGCTA 59.799 52.381 6.58 0.00 0.00 3.49
1173 1196 3.065786 CCGAGAACCAAGTACGTGCTATA 59.934 47.826 6.58 0.00 0.00 1.31
1183 1207 4.995124 AGTACGTGCTATAGTCCTTGTTG 58.005 43.478 3.62 0.00 0.00 3.33
1191 1215 5.221641 TGCTATAGTCCTTGTTGAACACAGT 60.222 40.000 0.00 0.00 36.48 3.55
1192 1216 5.120830 GCTATAGTCCTTGTTGAACACAGTG 59.879 44.000 0.00 0.00 36.48 3.66
1193 1217 3.350219 AGTCCTTGTTGAACACAGTGT 57.650 42.857 0.00 0.00 36.48 3.55
1194 1218 3.686016 AGTCCTTGTTGAACACAGTGTT 58.314 40.909 19.23 19.23 44.37 3.32
1226 1250 3.126858 TGCTGTTCATCTTTCGCCATTAC 59.873 43.478 0.00 0.00 0.00 1.89
1227 1251 3.126858 GCTGTTCATCTTTCGCCATTACA 59.873 43.478 0.00 0.00 0.00 2.41
1228 1252 4.379394 GCTGTTCATCTTTCGCCATTACAA 60.379 41.667 0.00 0.00 0.00 2.41
1249 1273 1.571919 GCATGAAGCTAATCGTCGGT 58.428 50.000 0.00 0.00 41.15 4.69
1251 1275 2.540515 CATGAAGCTAATCGTCGGTGT 58.459 47.619 0.00 0.00 0.00 4.16
1398 1422 0.681733 GGAGTTCAGACAGGTGAGCA 59.318 55.000 0.00 0.00 30.47 4.26
1399 1423 1.337635 GGAGTTCAGACAGGTGAGCAG 60.338 57.143 0.00 0.00 30.47 4.24
1400 1424 1.615883 GAGTTCAGACAGGTGAGCAGA 59.384 52.381 0.00 0.00 30.47 4.26
1401 1425 2.036475 GAGTTCAGACAGGTGAGCAGAA 59.964 50.000 0.00 0.00 30.47 3.02
1403 1427 2.533266 TCAGACAGGTGAGCAGAAAC 57.467 50.000 0.00 0.00 0.00 2.78
1404 1428 1.762370 TCAGACAGGTGAGCAGAAACA 59.238 47.619 0.00 0.00 0.00 2.83
1405 1429 1.869767 CAGACAGGTGAGCAGAAACAC 59.130 52.381 0.00 0.00 36.44 3.32
1406 1430 0.861837 GACAGGTGAGCAGAAACACG 59.138 55.000 0.00 0.00 37.82 4.49
1418 1454 3.908382 GCAGAAACACGCATAAGACAAAG 59.092 43.478 0.00 0.00 0.00 2.77
1430 1466 5.597806 CATAAGACAAAGTAGCCGGTGATA 58.402 41.667 1.90 0.00 0.00 2.15
1431 1467 4.755266 AAGACAAAGTAGCCGGTGATAT 57.245 40.909 1.90 0.00 0.00 1.63
1432 1468 5.864418 AAGACAAAGTAGCCGGTGATATA 57.136 39.130 1.90 0.00 0.00 0.86
1442 1478 4.389374 AGCCGGTGATATAATTGGACAAG 58.611 43.478 1.90 0.00 0.00 3.16
1444 1480 5.003804 GCCGGTGATATAATTGGACAAGAT 58.996 41.667 1.90 0.00 0.00 2.40
1470 1506 2.783828 TAAGATAGCTGCTGACGAGC 57.216 50.000 13.43 0.00 46.44 5.03
1528 1564 7.763528 TCATTTTTGCTAACCAATATGCGATTT 59.236 29.630 0.00 0.00 32.49 2.17
1531 1567 5.168526 TGCTAACCAATATGCGATTTGTC 57.831 39.130 0.00 0.00 0.00 3.18
1536 1572 4.517285 ACCAATATGCGATTTGTCTCTGT 58.483 39.130 0.00 0.00 0.00 3.41
1539 1575 2.907910 ATGCGATTTGTCTCTGTTGC 57.092 45.000 0.00 0.00 0.00 4.17
1715 1755 0.251922 ACTACCCAGGGTACGCTTCA 60.252 55.000 15.22 0.00 37.09 3.02
1716 1756 1.120530 CTACCCAGGGTACGCTTCAT 58.879 55.000 15.22 0.95 37.09 2.57
1717 1757 1.485066 CTACCCAGGGTACGCTTCATT 59.515 52.381 15.22 0.00 37.09 2.57
1718 1758 0.252197 ACCCAGGGTACGCTTCATTC 59.748 55.000 10.48 0.00 32.11 2.67
1783 1823 1.317611 CGTGCACGTAGAAGTCAATCG 59.682 52.381 30.50 0.00 34.11 3.34
1791 1831 1.270907 AGAAGTCAATCGCAGACCCT 58.729 50.000 0.00 0.00 42.51 4.34
1817 1857 8.364142 TGAAAATCGGGTCAAAATTTAGACAAT 58.636 29.630 0.00 0.72 36.50 2.71
1818 1858 8.532977 AAAATCGGGTCAAAATTTAGACAATG 57.467 30.769 0.00 0.00 36.50 2.82
1823 1867 6.799925 CGGGTCAAAATTTAGACAATGTGTAC 59.200 38.462 0.00 0.00 36.50 2.90
1824 1868 7.520776 CGGGTCAAAATTTAGACAATGTGTACA 60.521 37.037 0.00 0.00 36.50 2.90
1849 1896 3.193267 TCAGGAAAATCATTTTGGGCTCG 59.807 43.478 0.00 0.00 31.94 5.03
1850 1897 2.497273 AGGAAAATCATTTTGGGCTCGG 59.503 45.455 0.00 0.00 31.94 4.63
1851 1898 2.495669 GGAAAATCATTTTGGGCTCGGA 59.504 45.455 0.00 0.00 31.94 4.55
1852 1899 3.056179 GGAAAATCATTTTGGGCTCGGAA 60.056 43.478 0.00 0.00 31.94 4.30
1853 1900 3.874392 AAATCATTTTGGGCTCGGAAG 57.126 42.857 0.00 0.00 0.00 3.46
1854 1901 1.767759 ATCATTTTGGGCTCGGAAGG 58.232 50.000 0.00 0.00 0.00 3.46
1883 1930 7.932335 ACTAATCTAGTGTCAACGAGGAATAG 58.068 38.462 0.00 0.00 37.69 1.73
1887 1934 4.640789 AGTGTCAACGAGGAATAGCTAG 57.359 45.455 0.00 0.00 0.00 3.42
1906 1953 2.556286 CCTTCCAGACGAAAAGGCC 58.444 57.895 0.00 0.00 33.67 5.19
1925 1972 1.001406 CCGACAGCTTTTCAGTCTCCT 59.999 52.381 0.00 0.00 0.00 3.69
1928 1975 3.733337 GACAGCTTTTCAGTCTCCTTGA 58.267 45.455 0.00 0.00 0.00 3.02
1929 1976 4.130118 GACAGCTTTTCAGTCTCCTTGAA 58.870 43.478 0.00 0.00 33.00 2.69
1973 2020 5.163612 GGATCCTAAGTTCTTGGTTTCATGC 60.164 44.000 3.84 0.00 0.00 4.06
1991 2038 4.276678 TCATGCCTTCAAGTTCAAGTTGAG 59.723 41.667 7.71 0.00 38.62 3.02
2075 2122 3.858238 GCATGTTAACGTCTCTGACCTAC 59.142 47.826 0.00 0.00 0.00 3.18
2181 2231 2.000447 GTTTCATCAGGCCTGACGTAC 59.000 52.381 37.39 25.23 43.11 3.67
2182 2232 0.172578 TTCATCAGGCCTGACGTACG 59.827 55.000 37.39 21.78 43.11 3.67
2197 2247 0.449993 GTACGTGCGCTTTCGTTTCC 60.450 55.000 24.09 13.02 40.70 3.13
2233 2283 2.125753 GACTGCTGCTGGAGGTCG 60.126 66.667 16.21 0.00 35.84 4.79
2299 2349 3.391665 GATCACCAGGGAGGCCGTG 62.392 68.421 0.00 0.00 43.14 4.94
2668 2718 1.817099 GATGTCCAGCTTCGGCCTG 60.817 63.158 0.00 0.00 43.01 4.85
2726 2776 2.287829 GGGGACGAGGAGTTCATGT 58.712 57.895 0.00 0.00 0.00 3.21
3244 3294 2.022129 GTCGGTCAAGTGAGCCGTG 61.022 63.158 16.51 1.51 45.11 4.94
3255 3305 0.319986 TGAGCCGTGCGTACATTTGA 60.320 50.000 4.09 0.00 0.00 2.69
3256 3306 1.006832 GAGCCGTGCGTACATTTGAT 58.993 50.000 4.09 0.00 0.00 2.57
3257 3307 1.396996 GAGCCGTGCGTACATTTGATT 59.603 47.619 4.09 0.00 0.00 2.57
3258 3308 1.810151 AGCCGTGCGTACATTTGATTT 59.190 42.857 4.09 0.00 0.00 2.17
3259 3309 1.910819 GCCGTGCGTACATTTGATTTG 59.089 47.619 4.09 0.00 0.00 2.32
3362 3424 3.719699 GCAAAATGCGGCATGTACT 57.280 47.368 17.43 0.00 31.71 2.73
3363 3425 2.842208 GCAAAATGCGGCATGTACTA 57.158 45.000 17.43 0.00 31.71 1.82
3364 3426 2.450160 GCAAAATGCGGCATGTACTAC 58.550 47.619 17.43 0.88 31.71 2.73
3365 3427 2.704037 CAAAATGCGGCATGTACTACG 58.296 47.619 17.43 0.00 0.00 3.51
3366 3428 2.018542 AAATGCGGCATGTACTACGT 57.981 45.000 17.43 0.00 0.00 3.57
3367 3429 2.875087 AATGCGGCATGTACTACGTA 57.125 45.000 17.43 0.00 0.00 3.57
3368 3430 2.417339 ATGCGGCATGTACTACGTAG 57.583 50.000 20.97 20.97 0.00 3.51
3369 3431 0.248743 TGCGGCATGTACTACGTAGC 60.249 55.000 22.40 8.07 0.00 3.58
3370 3432 0.030369 GCGGCATGTACTACGTAGCT 59.970 55.000 22.40 11.95 0.00 3.32
3371 3433 1.265095 GCGGCATGTACTACGTAGCTA 59.735 52.381 22.40 10.99 0.00 3.32
3412 3474 2.899838 GCAATGGCGCCCGATGTA 60.900 61.111 26.77 3.54 0.00 2.29
3413 3475 2.477176 GCAATGGCGCCCGATGTAA 61.477 57.895 26.77 2.60 0.00 2.41
3415 3477 1.525995 AATGGCGCCCGATGTAAGG 60.526 57.895 26.77 0.00 0.00 2.69
3416 3478 2.265467 AATGGCGCCCGATGTAAGGT 62.265 55.000 26.77 0.00 0.00 3.50
3459 3522 6.183360 GCATGGTATTACAGTCCTCTTGTTTC 60.183 42.308 0.00 0.00 0.00 2.78
3462 3525 5.930569 GGTATTACAGTCCTCTTGTTTCGTT 59.069 40.000 0.00 0.00 0.00 3.85
3463 3526 6.426025 GGTATTACAGTCCTCTTGTTTCGTTT 59.574 38.462 0.00 0.00 0.00 3.60
3464 3527 7.599998 GGTATTACAGTCCTCTTGTTTCGTTTA 59.400 37.037 0.00 0.00 0.00 2.01
3537 3600 9.091784 GCTGTAATAAACTTGTACTAAGGTACC 57.908 37.037 2.73 2.73 45.49 3.34
3566 3629 9.506018 CAATATTGATGTTGTATATCACCCTCA 57.494 33.333 10.04 0.00 34.50 3.86
3598 3661 0.607762 TGTTGTACCACATGCCGCAT 60.608 50.000 0.00 0.00 0.00 4.73
3605 3668 1.426621 CACATGCCGCATGAGTGAC 59.573 57.895 34.59 0.00 43.81 3.67
3618 3681 5.140177 GCATGAGTGACGAGTTTAAACTTG 58.860 41.667 27.21 27.21 44.38 3.16
3624 3687 8.761497 TGAGTGACGAGTTTAAACTTGATTAAG 58.239 33.333 32.98 16.42 41.97 1.85
3674 3737 7.375053 ACGCAATTTGGTATGAGTTGTTAAAT 58.625 30.769 0.00 0.00 0.00 1.40
3689 3752 7.317390 AGTTGTTAAATTTTGTTGTCGTCCTT 58.683 30.769 0.00 0.00 0.00 3.36
3692 3755 2.399396 ATTTTGTTGTCGTCCTTGCG 57.601 45.000 0.00 0.00 0.00 4.85
3704 3767 2.444624 CCTTGCGTGACGATGACGG 61.445 63.158 10.10 0.00 44.46 4.79
3715 3778 2.216898 ACGATGACGGCTACTACTACC 58.783 52.381 0.00 0.00 44.46 3.18
3721 3784 2.292845 GACGGCTACTACTACCACCATC 59.707 54.545 0.00 0.00 0.00 3.51
3722 3785 2.304092 CGGCTACTACTACCACCATCA 58.696 52.381 0.00 0.00 0.00 3.07
3723 3786 2.034305 CGGCTACTACTACCACCATCAC 59.966 54.545 0.00 0.00 0.00 3.06
3762 3825 2.710096 TCTTAAGCCGCAATAGCCTT 57.290 45.000 0.00 0.00 37.52 4.35
3777 3840 6.238593 GCAATAGCCTTCTAACTCCAATCTTG 60.239 42.308 0.00 0.00 33.58 3.02
3812 3875 3.443045 CCCACCCTGCACGCATTC 61.443 66.667 0.00 0.00 0.00 2.67
3815 3878 2.112928 ACCCTGCACGCATTCACA 59.887 55.556 0.00 0.00 0.00 3.58
3824 3887 2.324860 CACGCATTCACACTCTCGTTA 58.675 47.619 0.00 0.00 0.00 3.18
3828 3891 2.924290 GCATTCACACTCTCGTTACTCC 59.076 50.000 0.00 0.00 0.00 3.85
3857 3920 1.831106 TCATGTCTGGCGGATGTAGTT 59.169 47.619 0.00 0.00 0.00 2.24
3858 3921 1.935873 CATGTCTGGCGGATGTAGTTG 59.064 52.381 0.00 0.00 0.00 3.16
3859 3922 0.249120 TGTCTGGCGGATGTAGTTGG 59.751 55.000 0.00 0.00 0.00 3.77
3860 3923 1.090052 GTCTGGCGGATGTAGTTGGC 61.090 60.000 0.00 0.00 0.00 4.52
3861 3924 1.221840 CTGGCGGATGTAGTTGGCT 59.778 57.895 0.00 0.00 0.00 4.75
3862 3925 0.811616 CTGGCGGATGTAGTTGGCTC 60.812 60.000 0.00 0.00 0.00 4.70
3863 3926 1.883084 GGCGGATGTAGTTGGCTCG 60.883 63.158 0.00 0.00 0.00 5.03
3864 3927 1.153628 GCGGATGTAGTTGGCTCGT 60.154 57.895 0.00 0.00 0.00 4.18
3865 3928 1.146358 GCGGATGTAGTTGGCTCGTC 61.146 60.000 0.00 0.00 0.00 4.20
3866 3929 0.172578 CGGATGTAGTTGGCTCGTCA 59.827 55.000 0.00 0.00 0.00 4.35
3867 3930 1.641577 GGATGTAGTTGGCTCGTCAC 58.358 55.000 0.00 0.00 0.00 3.67
3868 3931 1.067142 GGATGTAGTTGGCTCGTCACA 60.067 52.381 0.00 0.00 0.00 3.58
3869 3932 2.418746 GGATGTAGTTGGCTCGTCACAT 60.419 50.000 0.00 0.00 0.00 3.21
3870 3933 2.078849 TGTAGTTGGCTCGTCACATG 57.921 50.000 0.00 0.00 0.00 3.21
3871 3934 1.616374 TGTAGTTGGCTCGTCACATGA 59.384 47.619 0.00 0.00 0.00 3.07
3872 3935 2.233676 TGTAGTTGGCTCGTCACATGAT 59.766 45.455 0.00 0.00 0.00 2.45
3873 3936 2.015736 AGTTGGCTCGTCACATGATC 57.984 50.000 0.00 0.00 0.00 2.92
3874 3937 1.276138 AGTTGGCTCGTCACATGATCA 59.724 47.619 0.00 0.00 0.00 2.92
3875 3938 2.076100 GTTGGCTCGTCACATGATCAA 58.924 47.619 0.00 0.00 0.00 2.57
3876 3939 2.014335 TGGCTCGTCACATGATCAAG 57.986 50.000 0.00 0.00 0.00 3.02
3877 3940 0.654683 GGCTCGTCACATGATCAAGC 59.345 55.000 0.00 1.65 0.00 4.01
3878 3941 1.362768 GCTCGTCACATGATCAAGCA 58.637 50.000 0.00 0.00 0.00 3.91
3879 3942 1.938577 GCTCGTCACATGATCAAGCAT 59.061 47.619 0.00 0.00 0.00 3.79
3880 3943 2.353889 GCTCGTCACATGATCAAGCATT 59.646 45.455 0.00 0.00 0.00 3.56
3881 3944 3.557185 GCTCGTCACATGATCAAGCATTA 59.443 43.478 0.00 0.00 0.00 1.90
3882 3945 4.212847 GCTCGTCACATGATCAAGCATTAT 59.787 41.667 0.00 0.00 0.00 1.28
3883 3946 5.614231 GCTCGTCACATGATCAAGCATTATC 60.614 44.000 0.00 0.00 0.00 1.75
3884 3947 5.604565 TCGTCACATGATCAAGCATTATCT 58.395 37.500 0.00 0.00 0.00 1.98
3885 3948 5.693555 TCGTCACATGATCAAGCATTATCTC 59.306 40.000 0.00 0.00 0.00 2.75
3886 3949 5.695363 CGTCACATGATCAAGCATTATCTCT 59.305 40.000 0.00 0.00 0.00 3.10
3887 3950 6.865205 CGTCACATGATCAAGCATTATCTCTA 59.135 38.462 0.00 0.00 0.00 2.43
3888 3951 7.383300 CGTCACATGATCAAGCATTATCTCTAA 59.617 37.037 0.00 0.00 0.00 2.10
3889 3952 9.049523 GTCACATGATCAAGCATTATCTCTAAA 57.950 33.333 0.00 0.00 0.00 1.85
3890 3953 9.788889 TCACATGATCAAGCATTATCTCTAAAT 57.211 29.630 0.00 0.00 0.00 1.40
3892 3955 9.228949 ACATGATCAAGCATTATCTCTAAATCC 57.771 33.333 0.00 0.00 0.00 3.01
3893 3956 9.451002 CATGATCAAGCATTATCTCTAAATCCT 57.549 33.333 0.00 0.00 0.00 3.24
3895 3958 9.935241 TGATCAAGCATTATCTCTAAATCCTAC 57.065 33.333 0.00 0.00 0.00 3.18
3896 3959 9.377312 GATCAAGCATTATCTCTAAATCCTACC 57.623 37.037 0.00 0.00 0.00 3.18
3897 3960 7.680730 TCAAGCATTATCTCTAAATCCTACCC 58.319 38.462 0.00 0.00 0.00 3.69
3898 3961 6.287589 AGCATTATCTCTAAATCCTACCCG 57.712 41.667 0.00 0.00 0.00 5.28
3899 3962 4.870991 GCATTATCTCTAAATCCTACCCGC 59.129 45.833 0.00 0.00 0.00 6.13
3900 3963 5.420409 CATTATCTCTAAATCCTACCCGCC 58.580 45.833 0.00 0.00 0.00 6.13
3901 3964 2.769602 TCTCTAAATCCTACCCGCCT 57.230 50.000 0.00 0.00 0.00 5.52
3902 3965 3.042059 TCTCTAAATCCTACCCGCCTT 57.958 47.619 0.00 0.00 0.00 4.35
3903 3966 2.698797 TCTCTAAATCCTACCCGCCTTG 59.301 50.000 0.00 0.00 0.00 3.61
3904 3967 2.434702 CTCTAAATCCTACCCGCCTTGT 59.565 50.000 0.00 0.00 0.00 3.16
3905 3968 2.841881 TCTAAATCCTACCCGCCTTGTT 59.158 45.455 0.00 0.00 0.00 2.83
3906 3969 1.834188 AAATCCTACCCGCCTTGTTG 58.166 50.000 0.00 0.00 0.00 3.33
3907 3970 0.988832 AATCCTACCCGCCTTGTTGA 59.011 50.000 0.00 0.00 0.00 3.18
3908 3971 0.541863 ATCCTACCCGCCTTGTTGAG 59.458 55.000 0.00 0.00 0.00 3.02
3909 3972 1.745489 CCTACCCGCCTTGTTGAGC 60.745 63.158 0.00 0.00 0.00 4.26
3910 3973 1.003839 CTACCCGCCTTGTTGAGCA 60.004 57.895 0.00 0.00 0.00 4.26
3911 3974 1.298859 CTACCCGCCTTGTTGAGCAC 61.299 60.000 0.00 0.00 0.00 4.40
3912 3975 2.741486 TACCCGCCTTGTTGAGCACC 62.741 60.000 0.00 0.00 0.00 5.01
3913 3976 3.365265 CCGCCTTGTTGAGCACCC 61.365 66.667 0.00 0.00 0.00 4.61
3914 3977 2.281761 CGCCTTGTTGAGCACCCT 60.282 61.111 0.00 0.00 0.00 4.34
3915 3978 1.003839 CGCCTTGTTGAGCACCCTA 60.004 57.895 0.00 0.00 0.00 3.53
3916 3979 0.392998 CGCCTTGTTGAGCACCCTAT 60.393 55.000 0.00 0.00 0.00 2.57
3917 3980 1.839424 GCCTTGTTGAGCACCCTATT 58.161 50.000 0.00 0.00 0.00 1.73
3918 3981 2.679639 CGCCTTGTTGAGCACCCTATTA 60.680 50.000 0.00 0.00 0.00 0.98
3919 3982 3.555966 GCCTTGTTGAGCACCCTATTAT 58.444 45.455 0.00 0.00 0.00 1.28
3920 3983 3.954258 GCCTTGTTGAGCACCCTATTATT 59.046 43.478 0.00 0.00 0.00 1.40
3921 3984 5.130350 GCCTTGTTGAGCACCCTATTATTA 58.870 41.667 0.00 0.00 0.00 0.98
3922 3985 5.770162 GCCTTGTTGAGCACCCTATTATTAT 59.230 40.000 0.00 0.00 0.00 1.28
3923 3986 6.940298 GCCTTGTTGAGCACCCTATTATTATA 59.060 38.462 0.00 0.00 0.00 0.98
3924 3987 7.447238 GCCTTGTTGAGCACCCTATTATTATAA 59.553 37.037 0.00 0.00 0.00 0.98
3925 3988 9.520515 CCTTGTTGAGCACCCTATTATTATAAT 57.479 33.333 2.97 2.97 0.00 1.28
3928 3991 9.502091 TGTTGAGCACCCTATTATTATAATCAC 57.498 33.333 0.00 0.00 0.00 3.06
3929 3992 8.947115 GTTGAGCACCCTATTATTATAATCACC 58.053 37.037 0.00 0.00 0.00 4.02
3930 3993 7.630082 TGAGCACCCTATTATTATAATCACCC 58.370 38.462 0.00 0.00 0.00 4.61
3931 3994 6.970191 AGCACCCTATTATTATAATCACCCC 58.030 40.000 0.00 0.00 0.00 4.95
3932 3995 6.507485 AGCACCCTATTATTATAATCACCCCA 59.493 38.462 0.00 0.00 0.00 4.96
3933 3996 7.019153 AGCACCCTATTATTATAATCACCCCAA 59.981 37.037 0.00 0.00 0.00 4.12
3934 3997 7.122204 GCACCCTATTATTATAATCACCCCAAC 59.878 40.741 0.00 0.00 0.00 3.77
3935 3998 7.614192 CACCCTATTATTATAATCACCCCAACC 59.386 40.741 0.00 0.00 0.00 3.77
3936 3999 7.123383 CCCTATTATTATAATCACCCCAACCC 58.877 42.308 0.00 0.00 0.00 4.11
3937 4000 7.036132 CCCTATTATTATAATCACCCCAACCCT 60.036 40.741 0.00 0.00 0.00 4.34
3938 4001 9.064602 CCTATTATTATAATCACCCCAACCCTA 57.935 37.037 0.00 0.00 0.00 3.53
3941 4004 6.599986 ATTATAATCACCCCAACCCTAACA 57.400 37.500 0.00 0.00 0.00 2.41
3942 4005 6.599986 TTATAATCACCCCAACCCTAACAT 57.400 37.500 0.00 0.00 0.00 2.71
3943 4006 3.845109 AATCACCCCAACCCTAACATT 57.155 42.857 0.00 0.00 0.00 2.71
3944 4007 4.957606 AATCACCCCAACCCTAACATTA 57.042 40.909 0.00 0.00 0.00 1.90
3945 4008 4.957606 ATCACCCCAACCCTAACATTAA 57.042 40.909 0.00 0.00 0.00 1.40
3946 4009 4.036941 TCACCCCAACCCTAACATTAAC 57.963 45.455 0.00 0.00 0.00 2.01
3947 4010 3.658705 TCACCCCAACCCTAACATTAACT 59.341 43.478 0.00 0.00 0.00 2.24
3948 4011 4.106663 TCACCCCAACCCTAACATTAACTT 59.893 41.667 0.00 0.00 0.00 2.66
3949 4012 4.461431 CACCCCAACCCTAACATTAACTTC 59.539 45.833 0.00 0.00 0.00 3.01
3950 4013 4.106663 ACCCCAACCCTAACATTAACTTCA 59.893 41.667 0.00 0.00 0.00 3.02
3951 4014 5.081032 CCCCAACCCTAACATTAACTTCAA 58.919 41.667 0.00 0.00 0.00 2.69
3952 4015 5.719563 CCCCAACCCTAACATTAACTTCAAT 59.280 40.000 0.00 0.00 0.00 2.57
3953 4016 6.350949 CCCCAACCCTAACATTAACTTCAATG 60.351 42.308 0.00 0.00 40.93 2.82
3954 4017 6.435904 CCCAACCCTAACATTAACTTCAATGA 59.564 38.462 3.01 0.00 38.01 2.57
3955 4018 7.362920 CCCAACCCTAACATTAACTTCAATGAG 60.363 40.741 3.01 0.00 38.01 2.90
3956 4019 7.362920 CCAACCCTAACATTAACTTCAATGAGG 60.363 40.741 3.01 0.00 38.01 3.86
3957 4020 5.652452 ACCCTAACATTAACTTCAATGAGGC 59.348 40.000 3.01 0.00 38.01 4.70
3958 4021 5.888161 CCCTAACATTAACTTCAATGAGGCT 59.112 40.000 3.01 0.00 38.01 4.58
3959 4022 6.378280 CCCTAACATTAACTTCAATGAGGCTT 59.622 38.462 3.01 0.00 38.01 4.35
3960 4023 7.093771 CCCTAACATTAACTTCAATGAGGCTTT 60.094 37.037 3.01 0.00 38.01 3.51
3961 4024 7.970614 CCTAACATTAACTTCAATGAGGCTTTC 59.029 37.037 3.01 0.00 38.01 2.62
3962 4025 7.530426 AACATTAACTTCAATGAGGCTTTCT 57.470 32.000 3.01 0.00 38.01 2.52
3963 4026 7.530426 ACATTAACTTCAATGAGGCTTTCTT 57.470 32.000 3.01 0.00 38.01 2.52
3964 4027 7.597386 ACATTAACTTCAATGAGGCTTTCTTC 58.403 34.615 3.01 0.00 38.01 2.87
3965 4028 6.575162 TTAACTTCAATGAGGCTTTCTTCC 57.425 37.500 0.00 0.00 0.00 3.46
3966 4029 4.379302 ACTTCAATGAGGCTTTCTTCCT 57.621 40.909 0.00 0.00 36.46 3.36
3976 4039 5.351948 AGGCTTTCTTCCTCAGTTAGATC 57.648 43.478 0.00 0.00 0.00 2.75
3977 4040 4.780021 AGGCTTTCTTCCTCAGTTAGATCA 59.220 41.667 0.00 0.00 0.00 2.92
3978 4041 5.428131 AGGCTTTCTTCCTCAGTTAGATCAT 59.572 40.000 0.00 0.00 0.00 2.45
3979 4042 5.757808 GGCTTTCTTCCTCAGTTAGATCATC 59.242 44.000 0.00 0.00 0.00 2.92
3980 4043 6.407979 GGCTTTCTTCCTCAGTTAGATCATCT 60.408 42.308 0.00 0.00 0.00 2.90
3981 4044 7.047271 GCTTTCTTCCTCAGTTAGATCATCTT 58.953 38.462 0.00 0.00 0.00 2.40
3982 4045 7.224557 GCTTTCTTCCTCAGTTAGATCATCTTC 59.775 40.741 0.00 0.00 0.00 2.87
3983 4046 7.724490 TTCTTCCTCAGTTAGATCATCTTCA 57.276 36.000 0.00 0.00 0.00 3.02
3984 4047 7.911130 TCTTCCTCAGTTAGATCATCTTCAT 57.089 36.000 0.00 0.00 0.00 2.57
3985 4048 8.316497 TCTTCCTCAGTTAGATCATCTTCATT 57.684 34.615 0.00 0.00 0.00 2.57
3986 4049 8.202811 TCTTCCTCAGTTAGATCATCTTCATTG 58.797 37.037 0.00 0.00 0.00 2.82
3987 4050 7.429374 TCCTCAGTTAGATCATCTTCATTGT 57.571 36.000 0.00 0.00 0.00 2.71
3988 4051 7.855375 TCCTCAGTTAGATCATCTTCATTGTT 58.145 34.615 0.00 0.00 0.00 2.83
3989 4052 7.767659 TCCTCAGTTAGATCATCTTCATTGTTG 59.232 37.037 0.00 0.00 0.00 3.33
3990 4053 7.551974 CCTCAGTTAGATCATCTTCATTGTTGT 59.448 37.037 0.00 0.00 0.00 3.32
3991 4054 8.484641 TCAGTTAGATCATCTTCATTGTTGTC 57.515 34.615 0.00 0.00 0.00 3.18
3992 4055 8.316946 TCAGTTAGATCATCTTCATTGTTGTCT 58.683 33.333 0.00 0.00 0.00 3.41
3993 4056 8.944029 CAGTTAGATCATCTTCATTGTTGTCTT 58.056 33.333 0.00 0.00 0.00 3.01
3994 4057 9.160496 AGTTAGATCATCTTCATTGTTGTCTTC 57.840 33.333 0.00 0.00 0.00 2.87
3995 4058 8.939929 GTTAGATCATCTTCATTGTTGTCTTCA 58.060 33.333 0.00 0.00 0.00 3.02
3996 4059 9.676861 TTAGATCATCTTCATTGTTGTCTTCAT 57.323 29.630 0.00 0.00 0.00 2.57
3997 4060 7.986562 AGATCATCTTCATTGTTGTCTTCATG 58.013 34.615 0.00 0.00 0.00 3.07
3998 4061 6.505044 TCATCTTCATTGTTGTCTTCATGG 57.495 37.500 0.00 0.00 0.00 3.66
3999 4062 4.771590 TCTTCATTGTTGTCTTCATGGC 57.228 40.909 0.00 0.00 0.00 4.40
4000 4063 3.507233 TCTTCATTGTTGTCTTCATGGCC 59.493 43.478 0.00 0.00 0.00 5.36
4001 4064 2.170166 TCATTGTTGTCTTCATGGCCC 58.830 47.619 0.00 0.00 0.00 5.80
4002 4065 2.173519 CATTGTTGTCTTCATGGCCCT 58.826 47.619 0.00 0.00 0.00 5.19
4003 4066 3.010027 TCATTGTTGTCTTCATGGCCCTA 59.990 43.478 0.00 0.00 0.00 3.53
4004 4067 3.517296 TTGTTGTCTTCATGGCCCTAA 57.483 42.857 0.00 0.00 0.00 2.69
4005 4068 2.790433 TGTTGTCTTCATGGCCCTAAC 58.210 47.619 0.00 0.00 0.00 2.34
4006 4069 2.092323 GTTGTCTTCATGGCCCTAACC 58.908 52.381 0.00 0.00 0.00 2.85
4007 4070 1.367346 TGTCTTCATGGCCCTAACCA 58.633 50.000 0.00 0.00 45.82 3.67
4008 4071 1.707989 TGTCTTCATGGCCCTAACCAA 59.292 47.619 0.00 0.00 44.65 3.67
4009 4072 2.311542 TGTCTTCATGGCCCTAACCAAT 59.688 45.455 0.00 0.00 44.65 3.16
4010 4073 3.245586 TGTCTTCATGGCCCTAACCAATT 60.246 43.478 0.00 0.00 44.65 2.32
4011 4074 3.769300 GTCTTCATGGCCCTAACCAATTT 59.231 43.478 0.00 0.00 44.65 1.82
4012 4075 4.023291 TCTTCATGGCCCTAACCAATTTC 58.977 43.478 0.00 0.00 44.65 2.17
4013 4076 3.756082 TCATGGCCCTAACCAATTTCT 57.244 42.857 0.00 0.00 44.65 2.52
4014 4077 4.059773 TCATGGCCCTAACCAATTTCTT 57.940 40.909 0.00 0.00 44.65 2.52
4015 4078 4.424842 TCATGGCCCTAACCAATTTCTTT 58.575 39.130 0.00 0.00 44.65 2.52
4016 4079 4.843516 TCATGGCCCTAACCAATTTCTTTT 59.156 37.500 0.00 0.00 44.65 2.27
4017 4080 6.019748 TCATGGCCCTAACCAATTTCTTTTA 58.980 36.000 0.00 0.00 44.65 1.52
4018 4081 5.731957 TGGCCCTAACCAATTTCTTTTAC 57.268 39.130 0.00 0.00 36.55 2.01
4019 4082 4.528987 TGGCCCTAACCAATTTCTTTTACC 59.471 41.667 0.00 0.00 36.55 2.85
4020 4083 4.081309 GGCCCTAACCAATTTCTTTTACCC 60.081 45.833 0.00 0.00 0.00 3.69
4021 4084 4.081309 GCCCTAACCAATTTCTTTTACCCC 60.081 45.833 0.00 0.00 0.00 4.95
4022 4085 4.468510 CCCTAACCAATTTCTTTTACCCCC 59.531 45.833 0.00 0.00 0.00 5.40
4023 4086 5.338632 CCTAACCAATTTCTTTTACCCCCT 58.661 41.667 0.00 0.00 0.00 4.79
4024 4087 5.421056 CCTAACCAATTTCTTTTACCCCCTC 59.579 44.000 0.00 0.00 0.00 4.30
4025 4088 3.786553 ACCAATTTCTTTTACCCCCTCC 58.213 45.455 0.00 0.00 0.00 4.30
4026 4089 2.758423 CCAATTTCTTTTACCCCCTCCG 59.242 50.000 0.00 0.00 0.00 4.63
4027 4090 3.562609 CCAATTTCTTTTACCCCCTCCGA 60.563 47.826 0.00 0.00 0.00 4.55
4028 4091 2.865119 TTTCTTTTACCCCCTCCGAC 57.135 50.000 0.00 0.00 0.00 4.79
4029 4092 0.609662 TTCTTTTACCCCCTCCGACG 59.390 55.000 0.00 0.00 0.00 5.12
4030 4093 0.542702 TCTTTTACCCCCTCCGACGT 60.543 55.000 0.00 0.00 0.00 4.34
4031 4094 0.390735 CTTTTACCCCCTCCGACGTG 60.391 60.000 0.00 0.00 0.00 4.49
4032 4095 0.831288 TTTTACCCCCTCCGACGTGA 60.831 55.000 0.00 0.00 0.00 4.35
4033 4096 1.252904 TTTACCCCCTCCGACGTGAG 61.253 60.000 0.00 0.00 0.00 3.51
4038 4101 3.617368 CCTCCGACGTGAGGGAAT 58.383 61.111 19.12 0.00 46.85 3.01
4039 4102 2.803203 CCTCCGACGTGAGGGAATA 58.197 57.895 19.12 0.00 46.85 1.75
4040 4103 0.669077 CCTCCGACGTGAGGGAATAG 59.331 60.000 19.12 1.19 46.85 1.73
4041 4104 0.030908 CTCCGACGTGAGGGAATAGC 59.969 60.000 0.00 0.00 0.00 2.97
4042 4105 0.681887 TCCGACGTGAGGGAATAGCA 60.682 55.000 0.00 0.00 0.00 3.49
4043 4106 0.389391 CCGACGTGAGGGAATAGCAT 59.611 55.000 0.00 0.00 0.00 3.79
4044 4107 1.611977 CCGACGTGAGGGAATAGCATA 59.388 52.381 0.00 0.00 0.00 3.14
4045 4108 2.231478 CCGACGTGAGGGAATAGCATAT 59.769 50.000 0.00 0.00 0.00 1.78
4046 4109 3.442625 CCGACGTGAGGGAATAGCATATA 59.557 47.826 0.00 0.00 0.00 0.86
4047 4110 4.438880 CCGACGTGAGGGAATAGCATATAG 60.439 50.000 0.00 0.00 0.00 1.31
4048 4111 4.438880 CGACGTGAGGGAATAGCATATAGG 60.439 50.000 0.00 0.00 0.00 2.57
4049 4112 4.673968 ACGTGAGGGAATAGCATATAGGA 58.326 43.478 0.00 0.00 0.00 2.94
4050 4113 5.084519 ACGTGAGGGAATAGCATATAGGAA 58.915 41.667 0.00 0.00 0.00 3.36
4051 4114 5.186021 ACGTGAGGGAATAGCATATAGGAAG 59.814 44.000 0.00 0.00 0.00 3.46
4052 4115 5.423886 GTGAGGGAATAGCATATAGGAAGC 58.576 45.833 0.00 0.00 0.00 3.86
4053 4116 5.046304 GTGAGGGAATAGCATATAGGAAGCA 60.046 44.000 0.00 0.00 0.00 3.91
4054 4117 5.547666 TGAGGGAATAGCATATAGGAAGCAA 59.452 40.000 0.00 0.00 0.00 3.91
4055 4118 6.216251 TGAGGGAATAGCATATAGGAAGCAAT 59.784 38.462 0.00 0.00 0.00 3.56
4056 4119 7.037342 AGGGAATAGCATATAGGAAGCAATT 57.963 36.000 0.00 0.00 0.00 2.32
4057 4120 8.162848 AGGGAATAGCATATAGGAAGCAATTA 57.837 34.615 0.00 0.00 0.00 1.40
4058 4121 8.785859 AGGGAATAGCATATAGGAAGCAATTAT 58.214 33.333 0.00 0.00 0.00 1.28
4059 4122 9.413734 GGGAATAGCATATAGGAAGCAATTATT 57.586 33.333 0.00 0.00 0.00 1.40
4088 4151 9.856488 AGTTTTTCTTTTTCTTTTCTAGGTGAC 57.144 29.630 0.00 0.00 0.00 3.67
4089 4152 9.634163 GTTTTTCTTTTTCTTTTCTAGGTGACA 57.366 29.630 0.00 0.00 0.00 3.58
4097 4160 9.681062 TTTTCTTTTCTAGGTGACATAATAGGG 57.319 33.333 0.00 0.00 0.00 3.53
4098 4161 7.989947 TCTTTTCTAGGTGACATAATAGGGT 57.010 36.000 0.00 0.00 0.00 4.34
4099 4162 7.792032 TCTTTTCTAGGTGACATAATAGGGTG 58.208 38.462 0.00 0.00 0.00 4.61
4100 4163 5.546621 TTCTAGGTGACATAATAGGGTGC 57.453 43.478 0.00 0.00 0.00 5.01
4101 4164 4.816126 TCTAGGTGACATAATAGGGTGCT 58.184 43.478 0.00 0.00 0.00 4.40
4102 4165 4.833380 TCTAGGTGACATAATAGGGTGCTC 59.167 45.833 0.00 0.00 0.00 4.26
4103 4166 3.658725 AGGTGACATAATAGGGTGCTCT 58.341 45.455 0.00 0.00 0.00 4.09
4104 4167 3.643792 AGGTGACATAATAGGGTGCTCTC 59.356 47.826 0.00 0.00 0.00 3.20
4105 4168 3.553096 GGTGACATAATAGGGTGCTCTCG 60.553 52.174 0.00 0.00 0.00 4.04
4106 4169 3.068307 GTGACATAATAGGGTGCTCTCGT 59.932 47.826 0.00 0.00 0.00 4.18
4107 4170 4.277672 GTGACATAATAGGGTGCTCTCGTA 59.722 45.833 0.00 0.00 0.00 3.43
4108 4171 4.519350 TGACATAATAGGGTGCTCTCGTAG 59.481 45.833 0.00 0.00 0.00 3.51
4119 4182 2.349297 CTCTCGTAGCTGGTTTCGTT 57.651 50.000 0.00 0.00 0.00 3.85
4120 4183 2.673833 CTCTCGTAGCTGGTTTCGTTT 58.326 47.619 0.00 0.00 0.00 3.60
4121 4184 3.057734 CTCTCGTAGCTGGTTTCGTTTT 58.942 45.455 0.00 0.00 0.00 2.43
4122 4185 3.460103 TCTCGTAGCTGGTTTCGTTTTT 58.540 40.909 0.00 0.00 0.00 1.94
4141 4204 5.934935 TTTTTACTTGGAACGATGACCTC 57.065 39.130 0.00 0.00 0.00 3.85
4142 4205 4.610605 TTTACTTGGAACGATGACCTCA 57.389 40.909 0.00 0.00 0.00 3.86
4143 4206 4.610605 TTACTTGGAACGATGACCTCAA 57.389 40.909 0.00 0.00 0.00 3.02
4144 4207 3.703001 ACTTGGAACGATGACCTCAAT 57.297 42.857 0.00 0.00 0.00 2.57
4145 4208 4.021102 ACTTGGAACGATGACCTCAATT 57.979 40.909 0.00 0.00 0.00 2.32
4146 4209 3.753272 ACTTGGAACGATGACCTCAATTG 59.247 43.478 0.00 0.00 0.00 2.32
4147 4210 3.417069 TGGAACGATGACCTCAATTGT 57.583 42.857 5.13 0.00 0.00 2.71
4148 4211 3.334691 TGGAACGATGACCTCAATTGTC 58.665 45.455 5.13 0.00 0.00 3.18
4149 4212 2.348666 GGAACGATGACCTCAATTGTCG 59.651 50.000 5.13 8.69 35.46 4.35
4150 4213 2.743636 ACGATGACCTCAATTGTCGT 57.256 45.000 12.21 12.21 34.33 4.34
4151 4214 3.040147 ACGATGACCTCAATTGTCGTT 57.960 42.857 12.21 0.42 35.23 3.85
4152 4215 2.993899 ACGATGACCTCAATTGTCGTTC 59.006 45.455 12.21 3.75 35.23 3.95
4153 4216 2.348666 CGATGACCTCAATTGTCGTTCC 59.651 50.000 5.13 0.00 35.46 3.62
4154 4217 3.600388 GATGACCTCAATTGTCGTTCCT 58.400 45.455 5.13 0.00 35.46 3.36
4155 4218 3.485463 TGACCTCAATTGTCGTTCCTT 57.515 42.857 5.13 0.00 35.46 3.36
4156 4219 3.399330 TGACCTCAATTGTCGTTCCTTC 58.601 45.455 5.13 0.00 35.46 3.46
4157 4220 3.181459 TGACCTCAATTGTCGTTCCTTCA 60.181 43.478 5.13 0.00 35.46 3.02
4158 4221 3.813166 GACCTCAATTGTCGTTCCTTCAA 59.187 43.478 5.13 0.00 0.00 2.69
4159 4222 4.204012 ACCTCAATTGTCGTTCCTTCAAA 58.796 39.130 5.13 0.00 0.00 2.69
4160 4223 4.827284 ACCTCAATTGTCGTTCCTTCAAAT 59.173 37.500 5.13 0.00 0.00 2.32
4161 4224 6.001460 ACCTCAATTGTCGTTCCTTCAAATA 58.999 36.000 5.13 0.00 0.00 1.40
4162 4225 6.488683 ACCTCAATTGTCGTTCCTTCAAATAA 59.511 34.615 5.13 0.00 0.00 1.40
4163 4226 6.801862 CCTCAATTGTCGTTCCTTCAAATAAC 59.198 38.462 5.13 0.00 0.00 1.89
4164 4227 7.265647 TCAATTGTCGTTCCTTCAAATAACA 57.734 32.000 5.13 0.00 0.00 2.41
4165 4228 7.881142 TCAATTGTCGTTCCTTCAAATAACAT 58.119 30.769 5.13 0.00 0.00 2.71
4166 4229 9.004717 TCAATTGTCGTTCCTTCAAATAACATA 57.995 29.630 5.13 0.00 0.00 2.29
4167 4230 9.619316 CAATTGTCGTTCCTTCAAATAACATAA 57.381 29.630 0.00 0.00 0.00 1.90
4194 4257 5.972107 AAATAATGCCCTACATGAGATGC 57.028 39.130 0.00 0.00 39.60 3.91
4195 4258 4.923516 ATAATGCCCTACATGAGATGCT 57.076 40.909 0.00 0.00 39.60 3.79
4196 4259 3.589951 AATGCCCTACATGAGATGCTT 57.410 42.857 0.00 0.00 39.60 3.91
4197 4260 3.589951 ATGCCCTACATGAGATGCTTT 57.410 42.857 0.00 0.00 37.70 3.51
4198 4261 2.646930 TGCCCTACATGAGATGCTTTG 58.353 47.619 0.00 0.00 0.00 2.77
4199 4262 1.336125 GCCCTACATGAGATGCTTTGC 59.664 52.381 0.00 0.00 0.00 3.68
4200 4263 1.952296 CCCTACATGAGATGCTTTGCC 59.048 52.381 0.00 0.00 0.00 4.52
4201 4264 1.600957 CCTACATGAGATGCTTTGCCG 59.399 52.381 0.00 0.00 0.00 5.69
4202 4265 2.283298 CTACATGAGATGCTTTGCCGT 58.717 47.619 0.00 0.00 0.00 5.68
4203 4266 1.538047 ACATGAGATGCTTTGCCGTT 58.462 45.000 0.00 0.00 0.00 4.44
4204 4267 1.200716 ACATGAGATGCTTTGCCGTTG 59.799 47.619 0.00 0.00 0.00 4.10
4205 4268 1.200716 CATGAGATGCTTTGCCGTTGT 59.799 47.619 0.00 0.00 0.00 3.32
4206 4269 1.317613 TGAGATGCTTTGCCGTTGTT 58.682 45.000 0.00 0.00 0.00 2.83
4207 4270 2.499197 TGAGATGCTTTGCCGTTGTTA 58.501 42.857 0.00 0.00 0.00 2.41
4208 4271 3.081061 TGAGATGCTTTGCCGTTGTTAT 58.919 40.909 0.00 0.00 0.00 1.89
4209 4272 3.126858 TGAGATGCTTTGCCGTTGTTATC 59.873 43.478 0.00 0.00 0.00 1.75
4210 4273 3.347216 AGATGCTTTGCCGTTGTTATCT 58.653 40.909 0.00 0.00 0.00 1.98
4211 4274 2.987413 TGCTTTGCCGTTGTTATCTG 57.013 45.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 6.454795 AGCCAAATGACATAACGTGATTTTT 58.545 32.000 0.00 0.00 38.11 1.94
17 18 6.024552 AGCCAAATGACATAACGTGATTTT 57.975 33.333 0.00 0.00 38.11 1.82
18 19 5.643379 AGCCAAATGACATAACGTGATTT 57.357 34.783 0.00 0.00 41.45 2.17
19 20 5.643379 AAGCCAAATGACATAACGTGATT 57.357 34.783 0.00 0.00 32.20 2.57
20 21 6.037172 GTCTAAGCCAAATGACATAACGTGAT 59.963 38.462 0.00 0.00 0.00 3.06
21 22 5.350365 GTCTAAGCCAAATGACATAACGTGA 59.650 40.000 0.00 0.00 0.00 4.35
22 23 5.351465 AGTCTAAGCCAAATGACATAACGTG 59.649 40.000 0.00 0.00 32.41 4.49
23 24 5.488341 AGTCTAAGCCAAATGACATAACGT 58.512 37.500 0.00 0.00 32.41 3.99
24 25 6.092122 TCAAGTCTAAGCCAAATGACATAACG 59.908 38.462 0.00 0.00 32.41 3.18
25 26 7.377766 TCAAGTCTAAGCCAAATGACATAAC 57.622 36.000 0.00 0.00 32.41 1.89
26 27 8.579850 AATCAAGTCTAAGCCAAATGACATAA 57.420 30.769 0.00 0.00 32.41 1.90
27 28 9.679661 TTAATCAAGTCTAAGCCAAATGACATA 57.320 29.630 0.00 0.00 32.41 2.29
28 29 8.579850 TTAATCAAGTCTAAGCCAAATGACAT 57.420 30.769 0.00 0.00 32.41 3.06
29 30 7.665559 ACTTAATCAAGTCTAAGCCAAATGACA 59.334 33.333 0.00 0.00 41.25 3.58
30 31 8.045176 ACTTAATCAAGTCTAAGCCAAATGAC 57.955 34.615 0.00 0.00 41.25 3.06
45 46 6.382608 TCGAGTGAACTGAGACTTAATCAAG 58.617 40.000 0.00 0.00 37.81 3.02
46 47 6.327279 TCGAGTGAACTGAGACTTAATCAA 57.673 37.500 0.00 0.00 0.00 2.57
47 48 5.959618 TCGAGTGAACTGAGACTTAATCA 57.040 39.130 0.00 0.00 0.00 2.57
48 49 8.399425 TCTTATCGAGTGAACTGAGACTTAATC 58.601 37.037 0.00 0.00 0.00 1.75
49 50 8.282455 TCTTATCGAGTGAACTGAGACTTAAT 57.718 34.615 0.00 0.00 0.00 1.40
50 51 7.683437 TCTTATCGAGTGAACTGAGACTTAA 57.317 36.000 0.00 0.00 0.00 1.85
51 52 7.771361 AGATCTTATCGAGTGAACTGAGACTTA 59.229 37.037 0.00 0.00 0.00 2.24
52 53 6.601613 AGATCTTATCGAGTGAACTGAGACTT 59.398 38.462 0.00 0.00 0.00 3.01
53 54 6.038161 CAGATCTTATCGAGTGAACTGAGACT 59.962 42.308 13.27 0.00 0.00 3.24
54 55 6.198687 CAGATCTTATCGAGTGAACTGAGAC 58.801 44.000 13.27 0.00 0.00 3.36
55 56 5.298026 CCAGATCTTATCGAGTGAACTGAGA 59.702 44.000 17.47 2.28 0.00 3.27
56 57 5.067153 ACCAGATCTTATCGAGTGAACTGAG 59.933 44.000 17.47 12.37 0.00 3.35
57 58 4.950475 ACCAGATCTTATCGAGTGAACTGA 59.050 41.667 17.47 0.65 0.00 3.41
58 59 5.163612 TGACCAGATCTTATCGAGTGAACTG 60.164 44.000 12.23 12.23 0.00 3.16
59 60 4.950475 TGACCAGATCTTATCGAGTGAACT 59.050 41.667 0.00 0.00 0.00 3.01
60 61 5.038033 GTGACCAGATCTTATCGAGTGAAC 58.962 45.833 0.00 0.00 0.00 3.18
61 62 4.705023 TGTGACCAGATCTTATCGAGTGAA 59.295 41.667 0.00 0.00 0.00 3.18
62 63 4.270008 TGTGACCAGATCTTATCGAGTGA 58.730 43.478 0.00 0.00 0.00 3.41
63 64 4.639135 TGTGACCAGATCTTATCGAGTG 57.361 45.455 0.00 0.00 0.00 3.51
64 65 4.279671 GGATGTGACCAGATCTTATCGAGT 59.720 45.833 0.00 0.00 32.31 4.18
65 66 4.522405 AGGATGTGACCAGATCTTATCGAG 59.478 45.833 0.00 0.00 32.31 4.04
66 67 4.474394 AGGATGTGACCAGATCTTATCGA 58.526 43.478 0.00 0.00 32.31 3.59
67 68 4.862902 AGGATGTGACCAGATCTTATCG 57.137 45.455 0.00 0.00 32.31 2.92
68 69 6.909550 ACTAGGATGTGACCAGATCTTATC 57.090 41.667 0.00 0.00 32.31 1.75
69 70 7.345653 TCAAACTAGGATGTGACCAGATCTTAT 59.654 37.037 0.00 0.00 32.31 1.73
70 71 6.667848 TCAAACTAGGATGTGACCAGATCTTA 59.332 38.462 0.00 3.65 32.31 2.10
71 72 5.485353 TCAAACTAGGATGTGACCAGATCTT 59.515 40.000 0.00 2.72 32.31 2.40
72 73 5.026121 TCAAACTAGGATGTGACCAGATCT 58.974 41.667 7.02 0.00 32.31 2.75
73 74 5.344743 TCAAACTAGGATGTGACCAGATC 57.655 43.478 0.00 0.00 0.00 2.75
74 75 5.452496 CGATCAAACTAGGATGTGACCAGAT 60.452 44.000 0.00 0.00 0.00 2.90
75 76 4.142160 CGATCAAACTAGGATGTGACCAGA 60.142 45.833 0.00 0.00 0.00 3.86
76 77 4.115516 CGATCAAACTAGGATGTGACCAG 58.884 47.826 0.00 0.00 0.00 4.00
77 78 3.118775 CCGATCAAACTAGGATGTGACCA 60.119 47.826 0.00 0.00 0.00 4.02
78 79 3.118738 ACCGATCAAACTAGGATGTGACC 60.119 47.826 0.00 0.00 0.00 4.02
79 80 3.865745 CACCGATCAAACTAGGATGTGAC 59.134 47.826 0.00 0.00 0.00 3.67
80 81 3.678806 GCACCGATCAAACTAGGATGTGA 60.679 47.826 0.00 0.00 0.00 3.58
81 82 2.609459 GCACCGATCAAACTAGGATGTG 59.391 50.000 0.00 0.00 0.00 3.21
82 83 2.738643 CGCACCGATCAAACTAGGATGT 60.739 50.000 0.00 0.00 0.00 3.06
83 84 1.860950 CGCACCGATCAAACTAGGATG 59.139 52.381 0.00 0.00 0.00 3.51
84 85 1.202533 CCGCACCGATCAAACTAGGAT 60.203 52.381 0.00 0.00 0.00 3.24
85 86 0.174845 CCGCACCGATCAAACTAGGA 59.825 55.000 0.00 0.00 0.00 2.94
86 87 1.429148 GCCGCACCGATCAAACTAGG 61.429 60.000 0.00 0.00 0.00 3.02
87 88 1.429148 GGCCGCACCGATCAAACTAG 61.429 60.000 0.00 0.00 0.00 2.57
99 100 1.734117 GTCTGCAATTTGGCCGCAC 60.734 57.895 0.00 0.00 0.00 5.34
118 119 4.394300 CAGGAATGAATCTGCTCGAAACTT 59.606 41.667 0.00 0.00 0.00 2.66
130 132 3.313526 ACGTATGCTTGCAGGAATGAATC 59.686 43.478 0.00 0.00 0.00 2.52
136 138 1.271108 TGGAACGTATGCTTGCAGGAA 60.271 47.619 0.00 0.00 0.00 3.36
151 153 2.729360 GCAGTTAATTTTGCCGTGGAAC 59.271 45.455 0.00 0.00 34.28 3.62
175 177 3.518992 AATTGGGAGGGTTCGAGAAAA 57.481 42.857 0.00 0.00 0.00 2.29
191 193 4.398988 TGACTAGCAGCCCACAATAAATTG 59.601 41.667 1.13 1.13 43.26 2.32
192 194 4.599041 TGACTAGCAGCCCACAATAAATT 58.401 39.130 0.00 0.00 0.00 1.82
193 195 4.202441 CTGACTAGCAGCCCACAATAAAT 58.798 43.478 0.00 0.00 37.90 1.40
194 196 3.609853 CTGACTAGCAGCCCACAATAAA 58.390 45.455 0.00 0.00 37.90 1.40
195 197 3.266510 CTGACTAGCAGCCCACAATAA 57.733 47.619 0.00 0.00 37.90 1.40
196 198 2.988010 CTGACTAGCAGCCCACAATA 57.012 50.000 0.00 0.00 37.90 1.90
197 199 3.869623 CTGACTAGCAGCCCACAAT 57.130 52.632 0.00 0.00 37.90 2.71
266 268 1.021202 GAGAGAGAGAGCTAGCGCAA 58.979 55.000 20.99 0.00 39.10 4.85
275 277 3.924918 TGGTCAAAACGAGAGAGAGAG 57.075 47.619 0.00 0.00 0.00 3.20
276 278 3.637229 AGTTGGTCAAAACGAGAGAGAGA 59.363 43.478 0.00 0.00 35.13 3.10
277 279 3.983741 AGTTGGTCAAAACGAGAGAGAG 58.016 45.455 0.00 0.00 35.13 3.20
278 280 3.383505 TGAGTTGGTCAAAACGAGAGAGA 59.616 43.478 0.00 0.00 35.13 3.10
279 281 3.717707 TGAGTTGGTCAAAACGAGAGAG 58.282 45.455 0.00 0.00 35.13 3.20
280 282 3.812156 TGAGTTGGTCAAAACGAGAGA 57.188 42.857 0.00 0.00 35.13 3.10
436 441 2.090503 CGTAATTTTTGAAGCTTGCGCC 59.909 45.455 2.10 0.00 36.60 6.53
487 492 0.036952 ATATCTGCGATCCAAGGCGG 60.037 55.000 0.00 0.00 36.88 6.13
512 517 7.951347 ATAATCCATTGGCTTATTGATCTCC 57.049 36.000 6.06 0.00 0.00 3.71
522 527 4.032960 TGGCGATATAATCCATTGGCTT 57.967 40.909 0.00 0.00 34.29 4.35
530 535 4.093998 CAGCTGACAATGGCGATATAATCC 59.906 45.833 8.42 0.00 0.00 3.01
534 539 3.044235 CCAGCTGACAATGGCGATATA 57.956 47.619 17.39 0.00 0.00 0.86
535 540 1.888215 CCAGCTGACAATGGCGATAT 58.112 50.000 17.39 0.00 0.00 1.63
564 569 1.895866 CGTCCTTCCTTCTACCACCCT 60.896 57.143 0.00 0.00 0.00 4.34
646 651 1.194772 GAAACTTCCGTGAAAGCGAGG 59.805 52.381 0.00 0.00 0.00 4.63
650 655 2.031069 GGGAAGAAACTTCCGTGAAAGC 60.031 50.000 19.76 5.16 39.46 3.51
683 688 0.029834 GGACAGCGCTTTGGCATATG 59.970 55.000 7.50 0.00 38.60 1.78
749 754 3.536917 CCCATGGCGCGGTAGAGA 61.537 66.667 8.83 0.00 0.00 3.10
778 783 0.317160 TATAGATTCGTGGCCGCTGG 59.683 55.000 15.69 0.00 0.00 4.85
810 815 1.869767 GATGAATGGGTAAGCTGCTCG 59.130 52.381 1.00 0.00 0.00 5.03
867 872 1.748591 GCTTGCTAGGGAGATTGGTGG 60.749 57.143 0.00 0.00 0.00 4.61
911 916 1.534595 GGCCAAGAATGTTATGCGCTG 60.535 52.381 9.73 0.00 0.00 5.18
937 947 2.158564 AGAGAGAGAGAGGCAGAGGATG 60.159 54.545 0.00 0.00 0.00 3.51
946 956 1.416401 AGCCGAGTAGAGAGAGAGAGG 59.584 57.143 0.00 0.00 0.00 3.69
947 957 2.910688 AGCCGAGTAGAGAGAGAGAG 57.089 55.000 0.00 0.00 0.00 3.20
953 963 2.224329 TGGTAGCTAGCCGAGTAGAGAG 60.224 54.545 19.78 0.00 0.00 3.20
963 973 0.885196 CGAGGATCTGGTAGCTAGCC 59.115 60.000 19.78 12.11 0.00 3.93
989 1009 1.153409 CTTGCCATCTGCGCTCTCT 60.153 57.895 9.73 0.00 45.60 3.10
1171 1194 5.036117 ACACTGTGTTCAACAAGGACTAT 57.964 39.130 7.80 0.00 38.67 2.12
1173 1196 3.350219 ACACTGTGTTCAACAAGGACT 57.650 42.857 7.80 0.00 38.67 3.85
1183 1207 8.504005 ACAGCAAATATTACTAACACTGTGTTC 58.496 33.333 27.73 10.34 40.22 3.18
1194 1218 8.335356 GCGAAAGATGAACAGCAAATATTACTA 58.665 33.333 0.00 0.00 0.00 1.82
1244 1268 2.959357 GAGCTGCAGCAACACCGAC 61.959 63.158 38.24 15.42 45.16 4.79
1398 1422 5.107065 GCTACTTTGTCTTATGCGTGTTTCT 60.107 40.000 0.00 0.00 0.00 2.52
1399 1423 5.080068 GCTACTTTGTCTTATGCGTGTTTC 58.920 41.667 0.00 0.00 0.00 2.78
1400 1424 4.083484 GGCTACTTTGTCTTATGCGTGTTT 60.083 41.667 0.00 0.00 0.00 2.83
1401 1425 3.435671 GGCTACTTTGTCTTATGCGTGTT 59.564 43.478 0.00 0.00 0.00 3.32
1403 1427 2.029244 CGGCTACTTTGTCTTATGCGTG 59.971 50.000 0.00 0.00 0.00 5.34
1404 1428 2.268298 CGGCTACTTTGTCTTATGCGT 58.732 47.619 0.00 0.00 0.00 5.24
1405 1429 1.593006 CCGGCTACTTTGTCTTATGCG 59.407 52.381 0.00 0.00 0.00 4.73
1406 1430 2.351726 CACCGGCTACTTTGTCTTATGC 59.648 50.000 0.00 0.00 0.00 3.14
1418 1454 4.890088 TGTCCAATTATATCACCGGCTAC 58.110 43.478 0.00 0.00 0.00 3.58
1442 1478 7.757173 TCGTCAGCAGCTATCTTATCATTAATC 59.243 37.037 0.00 0.00 0.00 1.75
1444 1480 6.981722 TCGTCAGCAGCTATCTTATCATTAA 58.018 36.000 0.00 0.00 0.00 1.40
1491 1527 1.134946 GCAAAAATGATCCGTCAGGGG 59.865 52.381 0.00 0.00 37.87 4.79
1502 1538 6.201226 TCGCATATTGGTTAGCAAAAATGA 57.799 33.333 19.76 6.32 0.00 2.57
1528 1564 1.598962 GCCTGCAGCAACAGAGACA 60.599 57.895 8.66 0.00 42.97 3.41
1531 1567 1.744368 ATCGCCTGCAGCAACAGAG 60.744 57.895 8.66 0.00 44.04 3.35
1783 1823 2.482326 CCCGATTTTCAGGGTCTGC 58.518 57.895 0.00 0.00 42.67 4.26
1791 1831 7.278461 TGTCTAAATTTTGACCCGATTTTCA 57.722 32.000 23.85 5.36 33.02 2.69
1808 1848 6.764379 TCCTGACATGTACACATTGTCTAAA 58.236 36.000 22.30 9.71 36.39 1.85
1817 1857 7.523293 AAATGATTTTCCTGACATGTACACA 57.477 32.000 0.00 0.00 0.00 3.72
1818 1858 7.329226 CCAAAATGATTTTCCTGACATGTACAC 59.671 37.037 0.00 0.00 0.00 2.90
1823 1867 4.632688 GCCCAAAATGATTTTCCTGACATG 59.367 41.667 0.00 0.00 0.00 3.21
1824 1868 4.533311 AGCCCAAAATGATTTTCCTGACAT 59.467 37.500 0.00 0.00 0.00 3.06
1849 1896 6.777213 TGACACTAGATTAGTCTTCCTTCC 57.223 41.667 0.00 0.00 36.76 3.46
1850 1897 6.748198 CGTTGACACTAGATTAGTCTTCCTTC 59.252 42.308 0.00 0.00 36.76 3.46
1851 1898 6.433404 TCGTTGACACTAGATTAGTCTTCCTT 59.567 38.462 0.00 0.00 36.76 3.36
1852 1899 5.944599 TCGTTGACACTAGATTAGTCTTCCT 59.055 40.000 0.00 0.00 36.76 3.36
1853 1900 6.192234 TCGTTGACACTAGATTAGTCTTCC 57.808 41.667 0.00 0.00 36.76 3.46
1854 1901 6.093771 TCCTCGTTGACACTAGATTAGTCTTC 59.906 42.308 0.00 0.00 36.76 2.87
1883 1930 2.003301 CTTTTCGTCTGGAAGGCTAGC 58.997 52.381 6.04 6.04 35.43 3.42
1906 1953 2.447244 AGGAGACTGAAAAGCTGTCG 57.553 50.000 0.00 0.00 46.50 4.35
1948 1995 5.843019 TGAAACCAAGAACTTAGGATCCT 57.157 39.130 20.48 20.48 0.00 3.24
1973 2020 3.243201 GCCACTCAACTTGAACTTGAAGG 60.243 47.826 0.00 0.00 0.00 3.46
2052 2099 1.654105 GGTCAGAGACGTTAACATGCG 59.346 52.381 6.39 0.00 32.65 4.73
2120 2170 0.583083 CGTACGTTGTTGCGCTATGC 60.583 55.000 9.73 0.00 46.70 3.14
2197 2247 1.532343 CGCGGTCGAATCTGTGATCG 61.532 60.000 0.00 0.00 41.50 3.69
2233 2283 2.749441 GGCAGCAGCTTCACTCCC 60.749 66.667 0.00 0.00 41.70 4.30
2905 2955 0.659957 GCTTCACCTTGCGGATGATC 59.340 55.000 0.00 0.00 0.00 2.92
3092 3142 3.325753 GCTGAGGTGGAGGTGGCT 61.326 66.667 0.00 0.00 0.00 4.75
3218 3268 0.388134 CACTTGACCGACCGTAGTGG 60.388 60.000 0.00 0.00 46.41 4.00
3255 3305 4.816786 AAAAAGTGCGTACGTACCAAAT 57.183 36.364 29.08 11.14 0.00 2.32
3305 3367 0.955905 CAATCGCATGCATCCATCCA 59.044 50.000 19.57 0.00 0.00 3.41
3308 3370 2.482316 CCAAACAATCGCATGCATCCAT 60.482 45.455 19.57 0.28 0.00 3.41
3309 3371 1.135053 CCAAACAATCGCATGCATCCA 60.135 47.619 19.57 0.00 0.00 3.41
3310 3372 1.563111 CCAAACAATCGCATGCATCC 58.437 50.000 19.57 0.00 0.00 3.51
3311 3373 1.134753 TCCCAAACAATCGCATGCATC 59.865 47.619 19.57 0.00 0.00 3.91
3365 3427 6.912591 TCCGTAAAACGTTAAGCTATAGCTAC 59.087 38.462 27.11 20.39 45.45 3.58
3366 3428 7.026631 TCCGTAAAACGTTAAGCTATAGCTA 57.973 36.000 27.11 10.45 45.45 3.32
3368 3430 5.174579 CCTCCGTAAAACGTTAAGCTATAGC 59.825 44.000 17.33 17.33 40.58 2.97
3369 3431 6.268566 ACCTCCGTAAAACGTTAAGCTATAG 58.731 40.000 0.00 0.00 40.58 1.31
3370 3432 6.207691 ACCTCCGTAAAACGTTAAGCTATA 57.792 37.500 0.00 0.00 40.58 1.31
3371 3433 5.077134 ACCTCCGTAAAACGTTAAGCTAT 57.923 39.130 0.00 0.00 40.58 2.97
3412 3474 0.250166 GGTCACACACGGCTTACCTT 60.250 55.000 0.00 0.00 0.00 3.50
3413 3475 1.370064 GGTCACACACGGCTTACCT 59.630 57.895 0.00 0.00 0.00 3.08
3415 3477 2.231820 GTGGTCACACACGGCTTAC 58.768 57.895 0.00 0.00 46.90 2.34
3416 3478 4.762825 GTGGTCACACACGGCTTA 57.237 55.556 0.00 0.00 46.90 3.09
3446 3508 7.166167 ACCATAATAAACGAAACAAGAGGACT 58.834 34.615 0.00 0.00 0.00 3.85
3447 3509 7.373778 ACCATAATAAACGAAACAAGAGGAC 57.626 36.000 0.00 0.00 0.00 3.85
3459 3522 6.584563 CAGACCAAACCAAACCATAATAAACG 59.415 38.462 0.00 0.00 0.00 3.60
3462 3525 7.148154 CGATCAGACCAAACCAAACCATAATAA 60.148 37.037 0.00 0.00 0.00 1.40
3463 3526 6.317642 CGATCAGACCAAACCAAACCATAATA 59.682 38.462 0.00 0.00 0.00 0.98
3464 3527 5.125417 CGATCAGACCAAACCAAACCATAAT 59.875 40.000 0.00 0.00 0.00 1.28
3539 3602 9.507329 GAGGGTGATATACAACATCAATATTGT 57.493 33.333 14.97 0.00 44.98 2.71
3566 3629 3.763057 GGTACAACATGGACCCTCTTTT 58.237 45.455 0.00 0.00 45.88 2.27
3592 3655 1.291877 AAACTCGTCACTCATGCGGC 61.292 55.000 0.00 0.00 0.00 6.53
3598 3661 8.651391 TTAATCAAGTTTAAACTCGTCACTCA 57.349 30.769 20.78 0.00 38.57 3.41
3656 3719 9.877178 ACAACAAAATTTAACAACTCATACCAA 57.123 25.926 0.00 0.00 0.00 3.67
3657 3720 9.522804 GACAACAAAATTTAACAACTCATACCA 57.477 29.630 0.00 0.00 0.00 3.25
3674 3737 1.088306 ACGCAAGGACGACAACAAAA 58.912 45.000 0.00 0.00 46.39 2.44
3689 3752 2.692766 TAGCCGTCATCGTCACGCA 61.693 57.895 0.00 0.00 35.87 5.24
3692 3755 1.669779 AGTAGTAGCCGTCATCGTCAC 59.330 52.381 0.00 0.00 35.01 3.67
3704 3767 3.028850 TGGTGATGGTGGTAGTAGTAGC 58.971 50.000 0.00 0.00 0.00 3.58
3715 3778 1.603455 GGTGGTGGTGGTGATGGTG 60.603 63.158 0.00 0.00 0.00 4.17
3721 3784 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
3722 3785 2.279037 GAAGTGGTGGTGGTGGTGGT 62.279 60.000 0.00 0.00 0.00 4.16
3723 3786 1.528309 GAAGTGGTGGTGGTGGTGG 60.528 63.158 0.00 0.00 0.00 4.61
3824 3887 2.304180 CAGACATGAAGAGTTGGGGAGT 59.696 50.000 0.00 0.00 0.00 3.85
3828 3891 1.457346 GCCAGACATGAAGAGTTGGG 58.543 55.000 0.00 0.00 0.00 4.12
3857 3920 2.008543 GCTTGATCATGTGACGAGCCA 61.009 52.381 10.05 0.00 0.00 4.75
3858 3921 0.654683 GCTTGATCATGTGACGAGCC 59.345 55.000 10.05 0.00 0.00 4.70
3859 3922 1.362768 TGCTTGATCATGTGACGAGC 58.637 50.000 10.05 16.00 0.00 5.03
3860 3923 5.695363 AGATAATGCTTGATCATGTGACGAG 59.305 40.000 10.05 0.00 0.00 4.18
3861 3924 5.604565 AGATAATGCTTGATCATGTGACGA 58.395 37.500 10.05 0.00 0.00 4.20
3862 3925 5.695363 AGAGATAATGCTTGATCATGTGACG 59.305 40.000 10.05 0.00 0.00 4.35
3863 3926 8.599055 TTAGAGATAATGCTTGATCATGTGAC 57.401 34.615 10.05 0.00 0.00 3.67
3864 3927 9.788889 ATTTAGAGATAATGCTTGATCATGTGA 57.211 29.630 10.05 0.00 0.00 3.58
3866 3929 9.228949 GGATTTAGAGATAATGCTTGATCATGT 57.771 33.333 10.05 0.00 0.00 3.21
3867 3930 9.451002 AGGATTTAGAGATAATGCTTGATCATG 57.549 33.333 0.00 0.00 30.67 3.07
3869 3932 9.935241 GTAGGATTTAGAGATAATGCTTGATCA 57.065 33.333 0.00 0.00 35.61 2.92
3870 3933 9.377312 GGTAGGATTTAGAGATAATGCTTGATC 57.623 37.037 0.00 0.00 35.61 2.92
3871 3934 8.325046 GGGTAGGATTTAGAGATAATGCTTGAT 58.675 37.037 0.00 0.00 35.61 2.57
3872 3935 7.525526 CGGGTAGGATTTAGAGATAATGCTTGA 60.526 40.741 0.00 0.00 35.61 3.02
3873 3936 6.591834 CGGGTAGGATTTAGAGATAATGCTTG 59.408 42.308 0.00 0.00 35.61 4.01
3874 3937 6.702329 CGGGTAGGATTTAGAGATAATGCTT 58.298 40.000 0.00 0.00 35.61 3.91
3875 3938 5.337652 GCGGGTAGGATTTAGAGATAATGCT 60.338 44.000 0.00 0.00 37.43 3.79
3876 3939 4.870991 GCGGGTAGGATTTAGAGATAATGC 59.129 45.833 0.00 0.00 0.00 3.56
3877 3940 5.187967 AGGCGGGTAGGATTTAGAGATAATG 59.812 44.000 0.00 0.00 0.00 1.90
3878 3941 5.342866 AGGCGGGTAGGATTTAGAGATAAT 58.657 41.667 0.00 0.00 0.00 1.28
3879 3942 4.748701 AGGCGGGTAGGATTTAGAGATAA 58.251 43.478 0.00 0.00 0.00 1.75
3880 3943 4.399483 AGGCGGGTAGGATTTAGAGATA 57.601 45.455 0.00 0.00 0.00 1.98
3881 3944 3.261818 AGGCGGGTAGGATTTAGAGAT 57.738 47.619 0.00 0.00 0.00 2.75
3882 3945 2.698797 CAAGGCGGGTAGGATTTAGAGA 59.301 50.000 0.00 0.00 0.00 3.10
3883 3946 2.434702 ACAAGGCGGGTAGGATTTAGAG 59.565 50.000 0.00 0.00 0.00 2.43
3884 3947 2.474112 ACAAGGCGGGTAGGATTTAGA 58.526 47.619 0.00 0.00 0.00 2.10
3885 3948 2.943033 CAACAAGGCGGGTAGGATTTAG 59.057 50.000 0.00 0.00 0.00 1.85
3886 3949 2.572556 TCAACAAGGCGGGTAGGATTTA 59.427 45.455 0.00 0.00 0.00 1.40
3887 3950 1.353022 TCAACAAGGCGGGTAGGATTT 59.647 47.619 0.00 0.00 0.00 2.17
3888 3951 0.988832 TCAACAAGGCGGGTAGGATT 59.011 50.000 0.00 0.00 0.00 3.01
3889 3952 0.541863 CTCAACAAGGCGGGTAGGAT 59.458 55.000 0.00 0.00 0.00 3.24
3890 3953 1.980052 CTCAACAAGGCGGGTAGGA 59.020 57.895 0.00 0.00 0.00 2.94
3891 3954 1.745489 GCTCAACAAGGCGGGTAGG 60.745 63.158 0.00 0.00 0.00 3.18
3892 3955 1.003839 TGCTCAACAAGGCGGGTAG 60.004 57.895 0.00 0.00 0.00 3.18
3893 3956 1.302192 GTGCTCAACAAGGCGGGTA 60.302 57.895 0.00 0.00 0.00 3.69
3894 3957 2.594592 GTGCTCAACAAGGCGGGT 60.595 61.111 0.00 0.00 0.00 5.28
3895 3958 3.365265 GGTGCTCAACAAGGCGGG 61.365 66.667 0.00 0.00 0.00 6.13
3896 3959 2.463589 TAGGGTGCTCAACAAGGCGG 62.464 60.000 0.00 0.00 0.00 6.13
3897 3960 0.392998 ATAGGGTGCTCAACAAGGCG 60.393 55.000 0.00 0.00 0.00 5.52
3898 3961 1.839424 AATAGGGTGCTCAACAAGGC 58.161 50.000 0.00 0.00 0.00 4.35
3899 3962 8.918202 TTATAATAATAGGGTGCTCAACAAGG 57.082 34.615 0.00 0.00 0.00 3.61
3902 3965 9.502091 GTGATTATAATAATAGGGTGCTCAACA 57.498 33.333 0.00 0.00 0.00 3.33
3903 3966 8.947115 GGTGATTATAATAATAGGGTGCTCAAC 58.053 37.037 0.00 0.00 0.00 3.18
3904 3967 8.107095 GGGTGATTATAATAATAGGGTGCTCAA 58.893 37.037 0.00 0.00 0.00 3.02
3905 3968 7.311675 GGGGTGATTATAATAATAGGGTGCTCA 60.312 40.741 0.00 0.00 0.00 4.26
3906 3969 7.054751 GGGGTGATTATAATAATAGGGTGCTC 58.945 42.308 0.00 0.00 0.00 4.26
3907 3970 6.507485 TGGGGTGATTATAATAATAGGGTGCT 59.493 38.462 0.00 0.00 0.00 4.40
3908 3971 6.727394 TGGGGTGATTATAATAATAGGGTGC 58.273 40.000 0.00 0.00 0.00 5.01
3909 3972 7.614192 GGTTGGGGTGATTATAATAATAGGGTG 59.386 40.741 0.00 0.00 0.00 4.61
3910 3973 7.257640 GGGTTGGGGTGATTATAATAATAGGGT 60.258 40.741 0.00 0.00 0.00 4.34
3911 3974 7.036132 AGGGTTGGGGTGATTATAATAATAGGG 60.036 40.741 0.00 0.00 0.00 3.53
3912 3975 7.939781 AGGGTTGGGGTGATTATAATAATAGG 58.060 38.462 0.00 0.00 0.00 2.57
3915 3978 8.738592 TGTTAGGGTTGGGGTGATTATAATAAT 58.261 33.333 0.00 0.00 0.00 1.28
3916 3979 8.115490 TGTTAGGGTTGGGGTGATTATAATAA 57.885 34.615 0.00 0.00 0.00 1.40
3917 3980 7.709024 TGTTAGGGTTGGGGTGATTATAATA 57.291 36.000 0.00 0.00 0.00 0.98
3918 3981 6.599986 TGTTAGGGTTGGGGTGATTATAAT 57.400 37.500 0.00 0.00 0.00 1.28
3919 3982 6.599986 ATGTTAGGGTTGGGGTGATTATAA 57.400 37.500 0.00 0.00 0.00 0.98
3920 3983 6.599986 AATGTTAGGGTTGGGGTGATTATA 57.400 37.500 0.00 0.00 0.00 0.98
3921 3984 5.481615 AATGTTAGGGTTGGGGTGATTAT 57.518 39.130 0.00 0.00 0.00 1.28
3922 3985 4.957606 AATGTTAGGGTTGGGGTGATTA 57.042 40.909 0.00 0.00 0.00 1.75
3923 3986 3.845109 AATGTTAGGGTTGGGGTGATT 57.155 42.857 0.00 0.00 0.00 2.57
3924 3987 4.293901 AGTTAATGTTAGGGTTGGGGTGAT 59.706 41.667 0.00 0.00 0.00 3.06
3925 3988 3.658705 AGTTAATGTTAGGGTTGGGGTGA 59.341 43.478 0.00 0.00 0.00 4.02
3926 3989 4.042271 AGTTAATGTTAGGGTTGGGGTG 57.958 45.455 0.00 0.00 0.00 4.61
3927 3990 4.106663 TGAAGTTAATGTTAGGGTTGGGGT 59.893 41.667 0.00 0.00 0.00 4.95
3928 3991 4.668636 TGAAGTTAATGTTAGGGTTGGGG 58.331 43.478 0.00 0.00 0.00 4.96
3929 3992 6.435904 TCATTGAAGTTAATGTTAGGGTTGGG 59.564 38.462 0.00 0.00 38.77 4.12
3930 3993 7.362920 CCTCATTGAAGTTAATGTTAGGGTTGG 60.363 40.741 0.00 0.00 38.77 3.77
3931 3994 7.538575 CCTCATTGAAGTTAATGTTAGGGTTG 58.461 38.462 0.00 0.00 38.77 3.77
3932 3995 6.152831 GCCTCATTGAAGTTAATGTTAGGGTT 59.847 38.462 0.00 0.00 38.77 4.11
3933 3996 5.652452 GCCTCATTGAAGTTAATGTTAGGGT 59.348 40.000 0.00 0.00 38.77 4.34
3934 3997 5.888161 AGCCTCATTGAAGTTAATGTTAGGG 59.112 40.000 0.00 0.00 38.77 3.53
3935 3998 7.396540 AAGCCTCATTGAAGTTAATGTTAGG 57.603 36.000 0.00 0.00 38.77 2.69
3936 3999 8.734386 AGAAAGCCTCATTGAAGTTAATGTTAG 58.266 33.333 0.00 0.00 38.77 2.34
3937 4000 8.635765 AGAAAGCCTCATTGAAGTTAATGTTA 57.364 30.769 0.00 0.00 38.77 2.41
3938 4001 7.530426 AGAAAGCCTCATTGAAGTTAATGTT 57.470 32.000 0.00 0.00 38.77 2.71
3939 4002 7.309438 GGAAGAAAGCCTCATTGAAGTTAATGT 60.309 37.037 0.00 0.00 38.77 2.71
3940 4003 7.031975 GGAAGAAAGCCTCATTGAAGTTAATG 58.968 38.462 0.00 0.00 38.97 1.90
3941 4004 6.950619 AGGAAGAAAGCCTCATTGAAGTTAAT 59.049 34.615 0.00 0.00 0.00 1.40
3942 4005 6.306987 AGGAAGAAAGCCTCATTGAAGTTAA 58.693 36.000 0.00 0.00 0.00 2.01
3943 4006 5.880901 AGGAAGAAAGCCTCATTGAAGTTA 58.119 37.500 0.00 0.00 0.00 2.24
3944 4007 4.734266 AGGAAGAAAGCCTCATTGAAGTT 58.266 39.130 0.00 0.00 0.00 2.66
3945 4008 4.379302 AGGAAGAAAGCCTCATTGAAGT 57.621 40.909 0.00 0.00 0.00 3.01
3954 4017 4.780021 TGATCTAACTGAGGAAGAAAGCCT 59.220 41.667 0.00 0.00 38.81 4.58
3955 4018 5.091261 TGATCTAACTGAGGAAGAAAGCC 57.909 43.478 0.00 0.00 0.00 4.35
3956 4019 6.581712 AGATGATCTAACTGAGGAAGAAAGC 58.418 40.000 0.00 0.00 0.00 3.51
3957 4020 8.256605 TGAAGATGATCTAACTGAGGAAGAAAG 58.743 37.037 0.00 0.00 0.00 2.62
3958 4021 8.138928 TGAAGATGATCTAACTGAGGAAGAAA 57.861 34.615 0.00 0.00 0.00 2.52
3959 4022 7.724490 TGAAGATGATCTAACTGAGGAAGAA 57.276 36.000 0.00 0.00 0.00 2.52
3960 4023 7.911130 ATGAAGATGATCTAACTGAGGAAGA 57.089 36.000 0.00 0.00 0.00 2.87
3961 4024 7.986320 ACAATGAAGATGATCTAACTGAGGAAG 59.014 37.037 0.00 0.00 0.00 3.46
3962 4025 7.855375 ACAATGAAGATGATCTAACTGAGGAA 58.145 34.615 0.00 0.00 0.00 3.36
3963 4026 7.429374 ACAATGAAGATGATCTAACTGAGGA 57.571 36.000 0.00 0.00 0.00 3.71
3964 4027 7.551974 ACAACAATGAAGATGATCTAACTGAGG 59.448 37.037 0.00 0.00 0.00 3.86
3965 4028 8.489990 ACAACAATGAAGATGATCTAACTGAG 57.510 34.615 0.00 0.00 0.00 3.35
3966 4029 8.316946 AGACAACAATGAAGATGATCTAACTGA 58.683 33.333 0.00 0.00 0.00 3.41
3967 4030 8.489990 AGACAACAATGAAGATGATCTAACTG 57.510 34.615 0.00 0.00 0.00 3.16
3968 4031 9.160496 GAAGACAACAATGAAGATGATCTAACT 57.840 33.333 0.00 0.00 0.00 2.24
3969 4032 8.939929 TGAAGACAACAATGAAGATGATCTAAC 58.060 33.333 0.00 0.00 0.00 2.34
3970 4033 9.676861 ATGAAGACAACAATGAAGATGATCTAA 57.323 29.630 0.00 0.00 0.00 2.10
3971 4034 9.106070 CATGAAGACAACAATGAAGATGATCTA 57.894 33.333 0.00 0.00 0.00 1.98
3972 4035 7.067129 CCATGAAGACAACAATGAAGATGATCT 59.933 37.037 0.00 0.00 0.00 2.75
3973 4036 7.194278 CCATGAAGACAACAATGAAGATGATC 58.806 38.462 0.00 0.00 0.00 2.92
3974 4037 6.405508 GCCATGAAGACAACAATGAAGATGAT 60.406 38.462 0.00 0.00 0.00 2.45
3975 4038 5.106038 GCCATGAAGACAACAATGAAGATGA 60.106 40.000 0.00 0.00 0.00 2.92
3976 4039 5.100259 GCCATGAAGACAACAATGAAGATG 58.900 41.667 0.00 0.00 0.00 2.90
3977 4040 4.159135 GGCCATGAAGACAACAATGAAGAT 59.841 41.667 0.00 0.00 0.00 2.40
3978 4041 3.507233 GGCCATGAAGACAACAATGAAGA 59.493 43.478 0.00 0.00 0.00 2.87
3979 4042 3.367703 GGGCCATGAAGACAACAATGAAG 60.368 47.826 4.39 0.00 0.00 3.02
3980 4043 2.562298 GGGCCATGAAGACAACAATGAA 59.438 45.455 4.39 0.00 0.00 2.57
3981 4044 2.170166 GGGCCATGAAGACAACAATGA 58.830 47.619 4.39 0.00 0.00 2.57
3982 4045 2.173519 AGGGCCATGAAGACAACAATG 58.826 47.619 6.18 0.00 0.00 2.82
3983 4046 2.610438 AGGGCCATGAAGACAACAAT 57.390 45.000 6.18 0.00 0.00 2.71
3984 4047 3.153919 GTTAGGGCCATGAAGACAACAA 58.846 45.455 6.18 0.00 0.00 2.83
3985 4048 2.554344 GGTTAGGGCCATGAAGACAACA 60.554 50.000 6.18 0.00 0.00 3.33
3986 4049 2.092323 GGTTAGGGCCATGAAGACAAC 58.908 52.381 6.18 0.00 0.00 3.32
3987 4050 1.707989 TGGTTAGGGCCATGAAGACAA 59.292 47.619 6.18 0.00 32.81 3.18
3988 4051 1.367346 TGGTTAGGGCCATGAAGACA 58.633 50.000 6.18 0.00 32.81 3.41
3989 4052 2.507407 TTGGTTAGGGCCATGAAGAC 57.493 50.000 6.18 0.00 38.48 3.01
3990 4053 3.756082 AATTGGTTAGGGCCATGAAGA 57.244 42.857 6.18 0.00 38.48 2.87
3991 4054 4.026052 AGAAATTGGTTAGGGCCATGAAG 58.974 43.478 6.18 0.00 38.48 3.02
3992 4055 4.059773 AGAAATTGGTTAGGGCCATGAA 57.940 40.909 6.18 0.00 38.48 2.57
3993 4056 3.756082 AGAAATTGGTTAGGGCCATGA 57.244 42.857 6.18 0.00 38.48 3.07
3994 4057 4.824479 AAAGAAATTGGTTAGGGCCATG 57.176 40.909 6.18 0.00 38.48 3.66
3995 4058 5.188948 GGTAAAAGAAATTGGTTAGGGCCAT 59.811 40.000 6.18 0.00 38.48 4.40
3996 4059 4.528987 GGTAAAAGAAATTGGTTAGGGCCA 59.471 41.667 6.18 0.00 36.62 5.36
3997 4060 4.081309 GGGTAAAAGAAATTGGTTAGGGCC 60.081 45.833 0.00 0.00 0.00 5.80
3998 4061 4.081309 GGGGTAAAAGAAATTGGTTAGGGC 60.081 45.833 0.00 0.00 0.00 5.19
3999 4062 4.468510 GGGGGTAAAAGAAATTGGTTAGGG 59.531 45.833 0.00 0.00 0.00 3.53
4000 4063 5.338632 AGGGGGTAAAAGAAATTGGTTAGG 58.661 41.667 0.00 0.00 0.00 2.69
4001 4064 5.421056 GGAGGGGGTAAAAGAAATTGGTTAG 59.579 44.000 0.00 0.00 0.00 2.34
4002 4065 5.335261 GGAGGGGGTAAAAGAAATTGGTTA 58.665 41.667 0.00 0.00 0.00 2.85
4003 4066 4.164981 GGAGGGGGTAAAAGAAATTGGTT 58.835 43.478 0.00 0.00 0.00 3.67
4004 4067 3.786553 GGAGGGGGTAAAAGAAATTGGT 58.213 45.455 0.00 0.00 0.00 3.67
4005 4068 2.758423 CGGAGGGGGTAAAAGAAATTGG 59.242 50.000 0.00 0.00 0.00 3.16
4006 4069 3.442625 GTCGGAGGGGGTAAAAGAAATTG 59.557 47.826 0.00 0.00 0.00 2.32
4007 4070 3.693807 GTCGGAGGGGGTAAAAGAAATT 58.306 45.455 0.00 0.00 0.00 1.82
4008 4071 2.355412 CGTCGGAGGGGGTAAAAGAAAT 60.355 50.000 0.00 0.00 0.00 2.17
4009 4072 1.002315 CGTCGGAGGGGGTAAAAGAAA 59.998 52.381 0.00 0.00 0.00 2.52
4010 4073 0.609662 CGTCGGAGGGGGTAAAAGAA 59.390 55.000 0.00 0.00 0.00 2.52
4011 4074 0.542702 ACGTCGGAGGGGGTAAAAGA 60.543 55.000 2.48 0.00 0.00 2.52
4012 4075 0.390735 CACGTCGGAGGGGGTAAAAG 60.391 60.000 2.48 0.00 0.00 2.27
4013 4076 0.831288 TCACGTCGGAGGGGGTAAAA 60.831 55.000 0.00 0.00 0.00 1.52
4014 4077 1.228831 TCACGTCGGAGGGGGTAAA 60.229 57.895 0.00 0.00 0.00 2.01
4015 4078 1.679977 CTCACGTCGGAGGGGGTAA 60.680 63.158 0.00 0.00 0.00 2.85
4016 4079 2.044650 CTCACGTCGGAGGGGGTA 60.045 66.667 0.00 0.00 0.00 3.69
4022 4085 0.030908 GCTATTCCCTCACGTCGGAG 59.969 60.000 0.00 0.42 34.62 4.63
4023 4086 0.681887 TGCTATTCCCTCACGTCGGA 60.682 55.000 0.00 0.00 0.00 4.55
4024 4087 0.389391 ATGCTATTCCCTCACGTCGG 59.611 55.000 0.00 0.00 0.00 4.79
4025 4088 3.577649 ATATGCTATTCCCTCACGTCG 57.422 47.619 0.00 0.00 0.00 5.12
4026 4089 4.705507 TCCTATATGCTATTCCCTCACGTC 59.294 45.833 0.00 0.00 0.00 4.34
4027 4090 4.673968 TCCTATATGCTATTCCCTCACGT 58.326 43.478 0.00 0.00 0.00 4.49
4028 4091 5.655488 CTTCCTATATGCTATTCCCTCACG 58.345 45.833 0.00 0.00 0.00 4.35
4029 4092 5.046304 TGCTTCCTATATGCTATTCCCTCAC 60.046 44.000 0.00 0.00 0.00 3.51
4030 4093 5.093677 TGCTTCCTATATGCTATTCCCTCA 58.906 41.667 0.00 0.00 0.00 3.86
4031 4094 5.683876 TGCTTCCTATATGCTATTCCCTC 57.316 43.478 0.00 0.00 0.00 4.30
4032 4095 6.649041 ATTGCTTCCTATATGCTATTCCCT 57.351 37.500 0.00 0.00 0.00 4.20
4033 4096 8.986929 ATAATTGCTTCCTATATGCTATTCCC 57.013 34.615 0.00 0.00 36.00 3.97
4062 4125 9.856488 GTCACCTAGAAAAGAAAAAGAAAAACT 57.144 29.630 0.00 0.00 0.00 2.66
4063 4126 9.634163 TGTCACCTAGAAAAGAAAAAGAAAAAC 57.366 29.630 0.00 0.00 0.00 2.43
4071 4134 9.681062 CCCTATTATGTCACCTAGAAAAGAAAA 57.319 33.333 0.00 0.00 0.00 2.29
4072 4135 8.832735 ACCCTATTATGTCACCTAGAAAAGAAA 58.167 33.333 0.00 0.00 0.00 2.52
4073 4136 8.265055 CACCCTATTATGTCACCTAGAAAAGAA 58.735 37.037 0.00 0.00 0.00 2.52
4074 4137 7.635089 GCACCCTATTATGTCACCTAGAAAAGA 60.635 40.741 0.00 0.00 0.00 2.52
4075 4138 6.483640 GCACCCTATTATGTCACCTAGAAAAG 59.516 42.308 0.00 0.00 0.00 2.27
4076 4139 6.157994 AGCACCCTATTATGTCACCTAGAAAA 59.842 38.462 0.00 0.00 0.00 2.29
4077 4140 5.665812 AGCACCCTATTATGTCACCTAGAAA 59.334 40.000 0.00 0.00 0.00 2.52
4078 4141 5.216622 AGCACCCTATTATGTCACCTAGAA 58.783 41.667 0.00 0.00 0.00 2.10
4079 4142 4.816126 AGCACCCTATTATGTCACCTAGA 58.184 43.478 0.00 0.00 0.00 2.43
4080 4143 4.835615 AGAGCACCCTATTATGTCACCTAG 59.164 45.833 0.00 0.00 0.00 3.02
4081 4144 4.816126 AGAGCACCCTATTATGTCACCTA 58.184 43.478 0.00 0.00 0.00 3.08
4082 4145 3.643792 GAGAGCACCCTATTATGTCACCT 59.356 47.826 0.00 0.00 0.00 4.00
4083 4146 3.553096 CGAGAGCACCCTATTATGTCACC 60.553 52.174 0.00 0.00 0.00 4.02
4084 4147 3.068307 ACGAGAGCACCCTATTATGTCAC 59.932 47.826 0.00 0.00 0.00 3.67
4085 4148 3.296854 ACGAGAGCACCCTATTATGTCA 58.703 45.455 0.00 0.00 0.00 3.58
4086 4149 5.049398 CTACGAGAGCACCCTATTATGTC 57.951 47.826 0.00 0.00 0.00 3.06
4100 4163 2.349297 AACGAAACCAGCTACGAGAG 57.651 50.000 0.00 0.00 0.00 3.20
4101 4164 2.806608 AAACGAAACCAGCTACGAGA 57.193 45.000 0.00 0.00 0.00 4.04
4102 4165 3.872560 AAAAACGAAACCAGCTACGAG 57.127 42.857 0.00 0.00 0.00 4.18
4119 4182 5.369833 TGAGGTCATCGTTCCAAGTAAAAA 58.630 37.500 0.00 0.00 0.00 1.94
4120 4183 4.963373 TGAGGTCATCGTTCCAAGTAAAA 58.037 39.130 0.00 0.00 0.00 1.52
4121 4184 4.610605 TGAGGTCATCGTTCCAAGTAAA 57.389 40.909 0.00 0.00 0.00 2.01
4122 4185 4.610605 TTGAGGTCATCGTTCCAAGTAA 57.389 40.909 0.00 0.00 0.00 2.24
4123 4186 4.819105 ATTGAGGTCATCGTTCCAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
4124 4187 3.703001 ATTGAGGTCATCGTTCCAAGT 57.297 42.857 0.00 0.00 0.00 3.16
4125 4188 3.753272 ACAATTGAGGTCATCGTTCCAAG 59.247 43.478 13.59 0.00 0.00 3.61
4126 4189 3.750371 ACAATTGAGGTCATCGTTCCAA 58.250 40.909 13.59 0.00 0.00 3.53
4127 4190 3.334691 GACAATTGAGGTCATCGTTCCA 58.665 45.455 13.59 0.00 35.36 3.53
4128 4191 2.348666 CGACAATTGAGGTCATCGTTCC 59.651 50.000 13.59 0.00 34.97 3.62
4129 4192 2.993899 ACGACAATTGAGGTCATCGTTC 59.006 45.455 13.59 0.00 35.23 3.95
4130 4193 3.040147 ACGACAATTGAGGTCATCGTT 57.960 42.857 13.59 0.00 35.23 3.85
4131 4194 2.743636 ACGACAATTGAGGTCATCGT 57.256 45.000 13.59 12.76 34.33 3.73
4132 4195 2.348666 GGAACGACAATTGAGGTCATCG 59.651 50.000 13.59 12.09 34.97 3.84
4133 4196 3.600388 AGGAACGACAATTGAGGTCATC 58.400 45.455 13.59 4.89 34.97 2.92
4134 4197 3.703001 AGGAACGACAATTGAGGTCAT 57.297 42.857 13.59 8.66 34.97 3.06
4135 4198 3.181459 TGAAGGAACGACAATTGAGGTCA 60.181 43.478 13.59 0.86 34.97 4.02
4136 4199 3.399330 TGAAGGAACGACAATTGAGGTC 58.601 45.455 13.59 13.15 0.00 3.85
4137 4200 3.485463 TGAAGGAACGACAATTGAGGT 57.515 42.857 13.59 6.39 0.00 3.85
4138 4201 4.829064 TTTGAAGGAACGACAATTGAGG 57.171 40.909 13.59 5.71 0.00 3.86
4139 4202 7.359595 TGTTATTTGAAGGAACGACAATTGAG 58.640 34.615 13.59 8.24 0.00 3.02
4140 4203 7.265647 TGTTATTTGAAGGAACGACAATTGA 57.734 32.000 13.59 0.00 0.00 2.57
4141 4204 9.619316 TTATGTTATTTGAAGGAACGACAATTG 57.381 29.630 3.24 3.24 0.00 2.32
4170 4233 6.552350 AGCATCTCATGTAGGGCATTATTTTT 59.448 34.615 0.00 0.00 35.19 1.94
4171 4234 6.073314 AGCATCTCATGTAGGGCATTATTTT 58.927 36.000 0.00 0.00 35.19 1.82
4172 4235 5.638133 AGCATCTCATGTAGGGCATTATTT 58.362 37.500 0.00 0.00 35.19 1.40
4173 4236 5.252586 AGCATCTCATGTAGGGCATTATT 57.747 39.130 0.00 0.00 35.19 1.40
4174 4237 4.923516 AGCATCTCATGTAGGGCATTAT 57.076 40.909 0.00 0.00 35.19 1.28
4175 4238 4.712051 AAGCATCTCATGTAGGGCATTA 57.288 40.909 0.00 0.00 35.19 1.90
4176 4239 3.589951 AAGCATCTCATGTAGGGCATT 57.410 42.857 0.00 0.00 35.19 3.56
4177 4240 3.220110 CAAAGCATCTCATGTAGGGCAT 58.780 45.455 0.00 0.00 38.60 4.40
4178 4241 2.646930 CAAAGCATCTCATGTAGGGCA 58.353 47.619 0.00 0.00 0.00 5.36
4179 4242 1.336125 GCAAAGCATCTCATGTAGGGC 59.664 52.381 0.00 0.00 0.00 5.19
4180 4243 1.952296 GGCAAAGCATCTCATGTAGGG 59.048 52.381 0.00 0.00 0.00 3.53
4181 4244 1.600957 CGGCAAAGCATCTCATGTAGG 59.399 52.381 0.00 0.00 0.00 3.18
4182 4245 2.283298 ACGGCAAAGCATCTCATGTAG 58.717 47.619 0.00 0.00 0.00 2.74
4183 4246 2.401583 ACGGCAAAGCATCTCATGTA 57.598 45.000 0.00 0.00 0.00 2.29
4184 4247 1.200716 CAACGGCAAAGCATCTCATGT 59.799 47.619 0.00 0.00 0.00 3.21
4185 4248 1.200716 ACAACGGCAAAGCATCTCATG 59.799 47.619 0.00 0.00 0.00 3.07
4186 4249 1.538047 ACAACGGCAAAGCATCTCAT 58.462 45.000 0.00 0.00 0.00 2.90
4187 4250 1.317613 AACAACGGCAAAGCATCTCA 58.682 45.000 0.00 0.00 0.00 3.27
4188 4251 3.375299 AGATAACAACGGCAAAGCATCTC 59.625 43.478 0.00 0.00 0.00 2.75
4189 4252 3.127548 CAGATAACAACGGCAAAGCATCT 59.872 43.478 0.00 0.00 0.00 2.90
4190 4253 3.429085 CAGATAACAACGGCAAAGCATC 58.571 45.455 0.00 0.00 0.00 3.91
4191 4254 3.492421 CAGATAACAACGGCAAAGCAT 57.508 42.857 0.00 0.00 0.00 3.79
4192 4255 2.987413 CAGATAACAACGGCAAAGCA 57.013 45.000 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.