>input_sequence_36124
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-----------------------------------------------------------ATGGCAAGCAGATCCGCCGAG
CTTCTGTCGAGGATGGCCGCCGGCGACGGCCACGGCGAGAACTCGTCCTACTTCGACGGGTGGAAGGCGTACGACATGAA
CCCCTTCCACCCGCAGGACAACCGCGGGGGCGTCATCCAGATGGGCCTCGCCGAGAACCAAGTACGTGC---TATAGTCC
-TTGTTGAACACAGTGTTAGTAATATTTGCTGTTCATCTTTCGCCATTACAAAGCATGAAGCTAATCGTCGGTGTTGCTG
CAGCTCTCGCTGGACCTGATCGAGGAGTGGAGCAAGGCCCACCCGGAGGCGTCCATCTGCACGGCGGAGGGCGCCTCGCA
GTTCAAGAGGATCGCCAATTTCCAGGACTACCACGGCCTCCCGGAGTTCAGACAGGTGAGCAGAAACACGC---------
---ATAAGACAAAGTAGCCGGTGATATAATTGGACAAGATTAATGATAAGATAGCTGCTGACGAGCGCGAAAGCGACGGA
GCAGCGCCCCTGACGGATCATTTTTGCTAACCAATATGCGATTTGTCTCTGTTGCTGCAGGCGATGGCCCAGTTCATGGG
GCAGGTGAGGGGGTGGAAGGCCAGGTTTGACCCGGATCGCGTCGTGATGAGCGGCGGCGCCACCGGCGCGCAGGAGACGC
TCGCCTTCTGCCTTGCCAACCCCGGCGAGGCCTTCCTCGTGCCCACGCCTTACTACCCAGGGTACGC----TTCATTCGT
CAACCCCTTGACAGCAACTGAATTCGGTGCATGTCCGCCTCTCGTGCACGTAGAAGTCAATCGCAGACCCTGAAAATCGG
GTCAAAATTTAGACAATGT----GTACA---TGTCAGGAAAATCATTTTGGGCTCGGAAGGAAGACTAATCTAGTGTCAA
CGAGGAATAGCTAGCCTTCCAGACGAAAAGGCCGACAGCTTTTCAGTCTCCTTGAAATAAAATCAAATCCAAGTAGGATC
CTAAGTTCTTGGTTTCATGCCTTCAAGTTCAAGTTGAGTGGCGCAACCTAGCCTGCATATACAGCAGCCGGTCTGGTCTT
TGGTGACCTTTTGGTTAACGCATGTTAACGTCTCTGACCTACGCACGGTCAATTGATGACC---AATAAAATTCAAATGG
AGTAAAGATGCATAGCGCAACAACGTACGCATGCATGCACGCGACGAGTTGTTTCATCAGGCCTGACGTACGTGCGCTTT
CGTTTCCGATCACAGATTCGACCGCGACTGCTGCTGGAGGTCGGGAGTGAAGCTGCTGCCGATCGAGTGCCACAGCTCCA
ACGACTTCAGGATCACCAGGGAGGCCGTGGTGGCGGCGTACGAGGGCGCGCGGAGCAGCGGCGTGCGCGTCAAGGGCATC
CTCATCACCAACCCGTCCAACCCGCTGGGCACGACCGCGGACCGGGCCACGCTGGCCATGCTCGCCACCTTCGCCACGGA
GCACCGCGTGCATCTCATCTGCGACGAGATCTACGCGGGGTCGGTCTTCGCCAAGCCGGAGTACGTGAGCATCGCCGAGG
TGATCGAGCACGACGCGCCCGGCGCCGACCGGGACCTCATCCACATCGCCTACAGCCTCTCCAAGGACTTCGGCCTCCCG
GGGTTCCGCGTCGGCATCGTCTACTCGTACAACGACGCCGTCGTGGCCTGCGCGCGCAAGATGTCCAGCTTCGGCCTGGT
GTCCTCGCAGACGCAGCTCTTCCTGGCCAAGATGCTCGGGGACGAGGAGTTCATGTCCCGGTTCCTGCGCGAGAGCGCGC
GGCGGCTGGCGGCGCGGCACGAGCTGTTCACGTCGGGGCTCCGCGAGGTGGGCATCGGGTGCCTGGGCGGCAACGCCGGG
CTCTTCTCGTGGATGGACCTGCGGGGCATGCTCCGGGAGAAGACGGCGGAGGCGGAGCTGGAGCTGTGGCGGGTGATCAT
CCGCAAGGTGAAGCTCAACGTGTCGCCGGGGACGTCGTTCCACTGCGGCGAGCCCGGGTGGTTCCGCGTCTGCCACGCCA
ACATGGACGACGAGACCATGGGGGTGGCGCTGAGCCGGATCCGGGACTTCGTGCGCCAGCACCAGCAGCAGAAGGCCAAG
GCCCAGCGCTGGGCCGCCAGGAGCCACCTCCACCTCAGCCTCCAGCGCCACGGCGCCATGGCGTCGCAGTACCACGCGCT
CTCCAGCCCCATGGCCGCGCTGCTGTCGCCCCAGTCTCCGCTCGTCCACGCCGCCAGCTAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr2A_1_TraesCS2A01G396400
AGAGATCCTTATAGAAAAAAATCACGTTATGTCATTTGGCTTAGACTTGATTAAGTCTCAGTTCACTCGATAAGATCTGG
TCACATCCTAGTTTGATCGGTGCGGCCAAATTGCAGACAAGTTTCGA-GCAGATTCATTCCTGCAAGCATACGTTCCACG
GCAAAATTAACTGCTGTTTTCTCGAACCCTCCCAATTTATTGTGGGCTGCTAGTCAGTCCCCGCCCCGTCCAACACGAGC
TCCAACCGCCGGTGGCGCTGGCGCCGGTTGCGCTAGCTCTCTCTCTCGTTTTGACCAACTCAAC--ATCGAGCCGACGAT
ACCGCCGTCGCCATCCGTCGTCCGGCGAAGTCGCCAGCCCGCACGCCGCAGATCGAACCGCCGGCGACGGGACGG-GTTT
TTTCTCCGAGCCCCACATGGGCGCGCTCGCCTGTTGGTACGGCGCAAGCTTCAAAAATTACGACCGCACGTCCATCGTCA
GGTCACGTCGCCCGCCTTGGATCGCAGATATTCTTCGGAGATCAATAAGCCAATGGATTATATCGCCATTGTCAGCTGGC
CGGGCCGGAGGGTGGTAGAAGGAAGGACGGGCGGGGCCTGAGAGGTCGCCATCTGGCCCAGCTAGCTGCTGCGTCTTCGG
CTCCACCCGCCCTCGCTTTCACGGAAGTTTCTTCCCCGCCATGCGCGCATATGCCAAAGCGCTGTCCCTTTTTTCTCTCT
CTCGCGAGGCAGAGTGCTGTCCCTTGACCTGCGTCTCTACCGCGCCATGGGCAGCGCCAGCGCCAGCGGCCACGAATCTA
TAAATAGGCACCAACGAGCAGCTTACCCATTCATCTCCCTCCCTCCCTCGCCAGCTCAAGCTCAAGAAGCTCCACCAATC
TCCCTAGCAAGCTCAAGAAGCTTCATCGGCTAGATCAG-----CGCATAACATTCTTGGCCTCTCCCATCCTCTGCCTCT
CTCTCTCTACTCGGC----------TAGCTACCAGATCCTCGGAAACCAGAGAGCGCAGATGGCAAGCAGATCCGCCGAG
CTTCTGTCGAGGATGGCCGCCGGCGACGGCCACGGCGAGAACTCGTCCTACTTCGACGGGTGGAAGGCGTACGACATGAA
CCCCTTCCACCCGCAGGACAACCGCGGGGGCGTCATCCAGATGGGCCTCGCCGAGAACCAAGTACGTGC---TATAGTCC
-TTGTTGAACACAGTGTTAGTAATATTTGCTGTTCATCTTTCGCCATTACAAAGCATGAAGCTAATCGTCGGTGTTGCTG
CAGCTCTCGCTGGACCTGATCGAGGAGTGGAGCAAGGCCCACCCGGAGGCGTCCATCTGCACGGCGGAGGGCGCCTCGCA
GTTCAAGAGGATCGCCAATTTCCAGGACTACCACGGCCTCCCGGAGTTCAGACAGGTGAGCAGAAACACGC---------
---ATAAGACAAAGTAGCCGGTGATATAATTGGACAAGATTAATGATAAGATAGCTGCTGACGAGCGCGAAAGCGACGGA
GCAGCGCCCCTGACGGATCATTTTTGCTAACCAATATGCGATTTGTCTCTGTTGCTGCAGGCGATGGCCCAGTTCATGGG
GCAGGTGAGGGGGTGGAAGGCCAGGTTTGACCCGGATCGCGTCGTGATGAGCGGCGGCGCCACCGGCGCGCAGGAGACGC
TCGCCTTCTGCCTTGCCAACCCCGGCGAGGCCTTCCTCGTGCCCACGCCTTACTACCCAGGGTACGC----TTCATTCGT
CAACCCCTTGACAGCAACTGAATTCGGTGCATGTCCGCCTCTCGTGCACGTAGAAGTCAATCGCAGACCCTGAAAATCGG
GTCAAAATTTAGACAATGT----GTACA---TGTCAGGAAAATCATTTTGGGCTCGGAAGGAAGACTAATCTAGTGTCAA
CGAGGAATAGCTAGCCTTCCAGACGAAAAGGCCGACAGCTTTTCAGTCTCCTTGAAATAAAATCAAATCCAAGTAGGATC
CTAAGTTCTTGGTTTCATGCCTTCAAGTTCAAGTTGAGTGGCGCAACCTAGCCTGCATATACAGCAGCCGGTCTGGTCTT
TGGTGACCTTTTGGTTAACGCATGTTAACGTCTCTGACCTACGCACGGTCAATTGATGACC---AATAAAATTCAAATGG
AGTAAAGATGCATAGCGCAACAACGTACGCATGCATGCACGCGACGAGTTGTTTCATCAGGCCTGACGTACGTGCGCTTT
CGTTTCCGATCACAGATTCGACCGCGACTGCTGCTGGAGGTCGGGAGTGAAGCTGCTGCCGATCGAGTGCCACAGCTCCA
ACGACTTCAGGATCACCAGGGAGGCCGTGGTGGCGGCGTACGAGGGCGCGCGGAGCAGCGGCGTGCGCGTCAAGGGCATC
CTCATCACCAACCCGTCCAACCCGCTGGGCACGACCGCGGACCGGGCCACGCTGGCCATGCTCGCCACCTTCGCCACGGA
GCACCGCGTGCATCTCATCTGCGACGAGATCTACGCGGGGTCGGTCTTCGCCAAGCCGGAGTACGTGAGCATCGCCGAGG
TGATCGAGCACGACGCGCCCGGCGCCGACCGGGACCTCATCCACATCGCCTACAGCCTCTCCAAGGACTTCGGCCTCCCG
GGGTTCCGCGTCGGCATCGTCTACTCGTACAACGACGCCGTCGTGGCCTGCGCGCGCAAGATGTCCAGCTTCGGCCTGGT
GTCCTCGCAGACGCAGCTCTTCCTGGCCAAGATGCTCGGGGACGAGGAGTTCATGTCCCGGTTCCTGCGCGAGAGCGCGC
GGCGGCTGGCGGCGCGGCACGAGCTGTTCACGTCGGGGCTCCGCGAGGTGGGCATCGGGTGCCTGGGCGGCAACGCCGGG
CTCTTCTCGTGGATGGACCTGCGGGGCATGCTCCGGGAGAAGACGGCGGAGGCGGAGCTGGAGCTGTGGCGGGTGATCAT
CCGCAAGGTGAAGCTCAACGTGTCGCCGGGGACGTCGTTCCACTGCGGCGAGCCCGGGTGGTTCCGCGTCTGCCACGCCA
ACATGGACGACGAGACCATGGGGGTGGCGCTGAGCCGGATCCGGGACTTCGTGCGCCAGCACCAGCAGCAGAAGGCCAAG
GCCCAGCGCTGGGCCGCCAGGAGCCACCTCCACCTCAGCCTCCAGCGCCACGGCGCCATGGCGTCGCAGTACCACGCGCT
CTCCAGCCCCATGGCCGCGCTGCTGTCGCCCCAGTCTCCGCTCGTCCACGCCGCCAGCTAAGCGAAACCACTACGGTCGG
TCAAGTGAGCCGTGCGTACATTTGATTTGGTACGTACGCACTTTTTTCGATCGCATGCATGCG------------CGCAT
GGGGCCTGGATGGATGCATGCGATTGTTTGGGAAGGTTTAGACATGCAAAATGCGGCATGTACTACGTAGCTATAGCTTA
ACGTTTTACGGAGGTTGCAATGGCGCCCGATGTAAGGTAAGCCGTGTGTGACCACGCATGGTATTACAGTCCTCTT-GTT
TCGTTTATTATGGTTTGGTTTGGTCTGATCGGATCAAGGCTTCTCGATCAGATGCTGTAATAAACTTGTACTAAGGTACC
TACAATATTGATGTTGTATATCACCCTCAAAAGAGGGTCCATGTTGTACCACATGCCGCATGAGTGACGAGTTTAAACTT
GATTAAGGGTTTATCTACATTTGTTATTAAAACGCAATTTGGTATGAGTTGTTAAATTTTGTTGTCGTCCTTGCGTGACG
ATGACGGCTACTACTACCACCATCACCACCACCACCACCACTTCTTCTTAAGCCGCAATAGCCTTCTAACTCCAATCTTG
GTTCCAACCCTTCCCGCCCCACCCTGCACGCATTCACACTCTCGTTACTCCCCAACTCTTCATGTCTGGCGGATGTAGTT
GGCTCGTCACATGATCAAGCATTATCTCTAAATCCTACCCGCCTTGTTGAGCACCCTATTATTATAATCACCCCAACCCT
AACATTAACTTCAATGAGGCTTTCTTCCTCAGTTAGATCATCTTCATTGTTGTCTTCATGGCCCTAACCAATTTCTTTTA
CCCCCTCCGACGTGAGGGAATAGCATATAGGAAGCAATTATTTAAGTTTTTCTTTTTCTTTTCTAGGTGACATAATAGGG
TGCTCTCGTAGCTGGTTTCGTTTTTTACTTGGAACGATGACCTCAATTGTCGTTCCTTCAAATAACATAATAAAAAATAA
TGCCCTACATGAGATGCTTTGCCGTTGTTATCTG
>chr2B_89
--------------------------------------------------------------------------------
--------TAGTTTGATCGTTGCGGCCAAATTGCAGACCAGTTTCTAGGCAAATTCAATCCTGCAAGCAT---TTCCACG
GCAAAATTAACTGCTGCTTTCTCGACACGAGC---------------------TCCGTCCCCGCCCCGTCCGACACGAGC
TCCAACCGCCGATGGCGCTCGCGCCGGCTGCGCTAG------CTCTCGTTTTGACCAACTCAACCCATCGAGCCGACGAT
ACTGCCGTCCCCATCCGTCGTCCGGCGAAGTCGCGAGCCCGCACGCCGCAGATCGAATCGCCGGCGACGGGACGGT-TTT
TTTCTCCTAGACCCACATGGGTACGCTCGCCTGTTAGTGCTGCGCAAGCTTCAAAAATTACGACCGCACGTCCATCGTCA
AGTCACGTCGCTCGCCTTGGATCGCAGATATTCATC-------AATTAGCCAATTGAT--TATCGCCATTGTCAGCTGGC
CGGGCCGGGGGGTGGTAGAAGGAAGGACGGGCGAGGCCTGAGAGGTCGCCATCTGGCCCAGCTAGCTGCTGCATCTTCGG
CTCCACCCGCTCTCCCTTTCACGGAAGTTTCTTCCCCACCATGCGCGTATATGCCAAAGCGCTGTCCCTTTTT--TTTCT
CTCGCGAGGCAGAGTGCTGTCCCTTGACCTCCG--TCTACCGCGCCATGGGCAGCGCCAGCCGCTAA------GAATCTA
TAAATAGGCATCAAGGAGCAGCTTACCCATTCATCTCCCTCCCTCCCTCGTCAGCTCAAGCTCAAGAAGCTTCACCAATC
TCCCTTTCAAGCCCACGAACCTTCATCAGCTAGATTAG-----CGCAGAACATTCTTGGCCTCTCTTCTTGTCTG--TCT
CTGTTTCACCTCATCCATCGATCTTTAGCTAGCTGACCCTCATAGACCCGAGAGCGCAGATGGCAAGCAGATCCGCCGAG
CTTCTCTCGAGGATGGCCGCCGGCGACGGCCACGGCGAGAACTCGTCCTACTTCGACGGGTGGAAGGCGTACGACATGAA
CCCCTTCCACCCGCAGGACAACCGCGGGGGCGTCATCCAGATGGGCCTCGCCGAGAATCAAGTGCGTGC---TCTTGTCC
CTTGTTTAACACAGC---AGTAATATTTGCTGTTCATCTTTCGCCATTA---AGCATGGAGCTAATCATCGGCGGTGCTG
CAGCTCTCGCTGGACCTGATCGAGGAGTGGAGCAAGGCCCACCCGGAGGCGTCCATTTGCACGGCGGAGGGCGCCTCGCA
GTTCAAGAGGATCGCCAATTTCCAGGACTACCACGGCCTCCCGGAGTTCAGACAGGTGAGCTC--AGCACGCACCAACAC
AAAATAAGACAAACTAGCCGGTGATTCCATTGGACAAAACTAATGATAAGATAGCTGCTGACGAGTGCGAAAGCGACGGA
GCAGCG-CCCTGACGGACCATTTTTGCTAACCAATATGCGATT-GTGTCTGATGTTGCAGGCGATGGCCCAGTTCATGGG
GCAGGTGAGGGGGTGGAAGGCCAGGTTTGACCCGGATCGCGTCGTGATGAGCGGCGGCGCCACCGGCGCGCAGGAGACGC
TCGCCTTCTGCCTCGCCAACCCCGGCGAGGCCTTCCTCGTGCCCACGCCTTACTACCCAGGGTACGC----TTC----GT
CAACCCCTTGACAGCAACTGAATTCGGTGCATGTCCGCCTCTCGTGCATGTTCAAGTCAATCACAGACCCGGAAAATCGG
GTCAAAACTTAGACAGCATGTACGTAGTAGTTGTCAGGAAAATCATTTTGGGCTCCC----AAGACTAATCTAGTGTCAA
CGAGGAATAACTAACCTTCCAGACGAAAAGGCGGACAGCTTTTCAGTCTCCGTGGT-TAAAATCAAATCCAAGTTGGATC
CTA-GTTCTTGGTTTCATGTCTTCAAGTTCAAGTTGAATGGCGCAACCTAGCCTGCATATACAGCAGCCGGTCTGGTCTT
TAGTGACTTTTTGGTTGATGCATGTTAACGTCTCTGACCTATGCACGGTCAATTGATGACCAATAATAAAATTCAAAAGG
AGTAAAGATACACAAGGT---AACGTAAGCATGCATGCACGCAACGAGTTGTTTCATCAGGCCTGACGTA--TGTGCTTT
CGTTTCTGATCACAGATTCGACCGCGACTGCTGCTGGAGGTCAGGAGTGAAGCTGCTGCCGATCGAGTGCCACAGCTCCA
ACGACTTCAGGATCACCAGGGAGGCCGTCGTGGCCGCGTACGAGAGCGCGCGGAGCAACGGCGTCCGCGTCAAGGGCATC
CTCATCACCAACCCGTCCAACCCGCTGGGCACGACCGCGGACCGGGCCACGCTGGCCATGCTCGCCACCTTCGCCACGGA
GCACCGCGTCCACCTCATCTGCGACGAGATCTACGCGGGGTCCGTGTTCGCCAAGCCGGAGTACGTGAGCATCGCCGAGG
TGATCGAGCACGACGCCCCCGGCGTCGACCGGGACCTCATCCACATCGCCTACAGCCTCTCCAAGGACTTCGGCCTCCCG
GGGTTCCGCGTCGGCATCGTCTACTCGTACAACGACGCCGTCGTGGCCTGCGCGCGCAAGATGTCCAGCTTCGGCCTCGT
GTCCTCGCAGACGCAGCTCTTCCTGGCCAAGATGCTCGGGGACGAGGAGTTCATGGCCCGGTTCCTGAGCGAGAGCGCGC
GGCGGCTGGCGGCGCGGCACGAGCTGTTCACGTCGGGGCTACGCGAGGTCGGCATCGGGTGCCTGGGCGGCAACGCCGGG
CTCTTCTCGTGGATGGACCTGCGGGGCATGCTCCGGGAGAAGACGGCGGAGGCGGAGCTGGAGCTGTGGCGGGTCATCAT
CCGCAAGGTGAAGCTCAACGTGTCGCCGGGGACGTCGTTTCACTGCCGCGAGCCCGGGTGGTTCCGCGTCTGCCACGCCA
ACATGGACGACGAGACCATGGGGGTGGCGCTGAACCGGATCCGGGACTTCGTGCGCCAGCACCAGCAGCAGAAGGCCAAA
GCCCAGCGCTGGGCCGCCAGGGGCCACCTCCACCTCAGCCTCCAGCGCCACGGCGCCATGGCTTCGCAGTACCACGCGCT
CTCCAGCCCCATGGCCGCGCTGCTGTCTCCCCAGTCTCCGCTGGTCCACGCCGCCAGCTAAGTCGGT-CACTACGGTCGG
TCAAGTGAGCCGTACGTACATTTG-----CTACGTACACACTTTTTTCGATCGCATGCATGCATGGCATGGTGCGTTT--
-------------ATGCATGCGATTGTTTGGGAAGGTTTAGACATGCAAAATGCGGCACGTAGC---------TAGCTTA
ACGTTTTACGGAGGTTGCAATGGCGCCCGACGTGGGC-AAGCCTTGTGTGACCACGCATGGTACTACGATCCTCTT-GTT
TTGT---TTATGGTTTGGTTTGGTCTGATCGGATCAAGGCTTCTCGATCAGATGCTGTAATAAACTTGTACTGAGGTAC-
---AAGATTGATGTTGTATATCACCCTCGAAAGAGGGTCCATGTTGTACCACATACCGCACGAGTGATGAGTTTAAACTT
AATTAAAGGTTTATCTACATTTGTTATTAAAACACAATCCGGTATGAGTTGTTAAACTTTCTTGTCGTCCTCGCATGATG
ACGACGACGACGACTACTACCAT------CACCACCACCACTTCTTCTTAAGCCGCAATAGCTTCCTAACTCCAATCTTC
GTTCTAACCCATCCCGCCCCACCTTGCACGCATTTACGCTCTCGTTGCTCTCCAACTCTTCATGTCTGGCGGATGTAGT-
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----------------------------------
>chr2D_206
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTGCTGGTCAGTCCTCGCCCCGTCCAACACGAGC
TCCAACCGCCGATGGCGCTCGCGCCGGCTGCGCCAG------CTCTCGTTTTGACCAACTCAACCCATCGAGCTGACGAT
ACTGCCGTCCCCATCCGTCGTCCGGCCAAGTCGCGAGCCCGCACGCCGCAGATCGAATCGCCGGCGACGGGACGGGGTTT
TTTCTCCGAGCCCCACATGGGCGCGCTCACCTGTTGGTACTGCGCAAGCTTCAAAAATTACGACCGCACGTCCATCGTCA
AGTCACG----TCGCCTTGGATCACATATATCCTTCCCAGATCAATTAGCCAATTGAT--TATCGCCATTGTCAGCTGGC
CGGGCCGGGCCTGT----------------------CCTGAGAGGTCGCCATCTGGCCCAGCTAGCTGCCGCATCTTCGG
CTCCACCTGCTCTCCCTTTCACGGAAGTTTCTTCCCCACCATGCGCGTATATGCCAAAGCGCCGTCCCA--TT--TCTTT
CTCGGGAGGCAGAGTGCTGTCCCTTGACCTGCG--TCTACCGCGCCATGGGCAGCGCCAGCGGCAGCGGCCACGAATCTA
TAAATAGGCACCAAGGAGCAGCTTACCCATTCAT----CTCCCTCCCTCGCCAGCTCAAGCTCAAGAAGCTTCACCAATC
TCCCTAGCAAGCTCAAGAAGCTTCATCAGCTAGATTAGATTAGCGCATAACATTCTTGGCCTCTCCAATCCTCTG--TCT
CTGTCTCTACTCAGC----------TAGCTACCAGATCCCCGGAAACCGGAGAGCGCAGATGGCAAGCAGATCCGCCGAG
CTTCTCTCGAGGATGGCCGCCGGCGACGGCCACGGCGAGAACTCGTCCTACTTCGACGGGTGGAAGGCGTACGACATGAA
CCCCTTCCACCCGCAGGACAACCGCGGGGGCGTCATCCAGATGGGCCTCGCCGAGAACCAAGTACGCGCTATTCTTGTCC
CTTGTTTAACACAGC---AGTAATATTTCTTGTCCATTTTTCGCCATTA---AGCACGAAGCTAACCATCGGCGGTGCTG
CAGCTCTCGCTGGACCTGATCGAGGAGTGGAGCAAGGCCCACCCGGAGGCGTCCATTTGCACGGCGGAGGGCGCCTCGCA
GTTCAAGAGGATCGCCAATTTCCAGGACTACCACGGCCTCCCGGAGTTCAGACAGGTGAGCTCGCAGCACCCACCAGCAC
-AAATATGACAAACTGGCCGGCGATTCCATTGGACAAAACTAATGATAAGATAGCTGCTGACGAGTGCGAAAGCGACGGA
GCAGCG-CCCTGACGGACCATTTTTGCTAACCAATATGCGATT-GTGTCTGATGTTGCAGGCGATGGCCCAGTTCATGGG
GCAGGTGAGGGGGTGGAAGGCCAGGTTTGACCCGGATCGCGTCGTGATGAGCGGCGGCGCCACCGGCGCGCAGGAGACGC
TCGCCTTCTGCCTTGCCAACCCCGGCGAGGCCTTCCTCGTGCCCACGCCTTACTACCCAGGGTACGCATGCTTC----GT
CAACCCCTTGACAGCAACTGAATTCGGTGCATGTCCACCTCTCGTGCACGTAGAAGTCAATCACAGACCCGGAAAATCGG
GTCAAAACTTAGACAACAT----GTAGTAGTTGTCAGGAAAATCATTTTGGGCTCCC----AAGACTAATCTAGTGTCAA
CGAGGAATAACTAACCTTCCAGACGAAAAGGCGGACAGCTTTTCAGTCTCCGTG--ATAAAATCAAATCCAAGTTTTTGG
CTTAATGTC------------------TTCAAGTTGAATCGTGCAATCTAGCATGCATT--CAGCAGCCGGTCTGGTCTT
TGGTGACTTTTTGGTTAATGCATGTTAACGTCTCTGACCCATGCACGGTCAATTGATGACC---AATAAAATTCAAATGG
AGTAAAGATACATAGCGCAACAACGTACGCATGCATGCACGCGACGAGTTGTTTCATCAGGCCTGACGTA--TGCGCTTT
CATTTCTGATCACAGATTCGACCGCGACTGCTGCTGGAGGTCAGGAGTGAAGCTGCTGCCGATCGAGTGCCACAGCTCCA
ACGACTTCAGGATCACCAGGGAGGCCGTCGTGGCCGCGTACGAGAGCGCGACGAGCAACGGCGTCCGCGTCAAGGGGATC
CTCATCACCAACCCGTCCAACCCGCTGGGCACGACGGCGGACCGGGCGACGCTGGCCATGCTCGCCACCTTCGCCACGGA
GCACCGCGTGCACCTCATCTGCGACGAGATCTACGCGGGGTCGGTCTTCGCCAAGCCGGAGTACGTGAGCATCGCCGAGG
TGATCGAGCGCGACGCCCCCGGCGCCGACCGGGACCTCATCCACATCGCCTACAGCCTCTCCAAGGATTTCGGCCTCCCG
GGGTTCCGCGTCGGCATCGTCTACTCGTACAACGACGCCGTCGTGGCCTGCGCGCGCAAGATGTCCAGCTTCGGGCTCGT
CTCCTCGCAGACGCAGCTCTTCCTGGCCAAGATGCTCGGGGACGAGGAGTTCATGGCGCGGTTCCTGCGCGAGAGCGCGC
GGCGGCTGGCGGCGCGGCACGAGCTGTTCACGTCGGGGCTCCGCGAGGTCGGCATCGGGTGCCTGGGCGGCAACGCCGGG
CTCTTCTCGTGGATGGACCTGCGGGGCATGCTCCGGGAGAAGACGGCGGAGGCGGAGCTGGAGCTGTGGCGGGTCATCAT
CCGCAAGGTGAAGCTCAACGTGTCGCCGGGGACGTCGTTCCACTGCGGCGAGCCCGGGTGGTTCCGCGTCTGCCACGCCA
ACATGGACGACGAGACCATGGGGGTGGCGCTGAGCCGGATCCGGGACTTCGTGCGCCAGCACCAGCAGCAGAAGGCCAAG
GCCCAGCGCTGGGCCGCCAGGGGGCACCTCCACCTCAGCCTGCAGCGCCACGGCGCCATGGCTTCGCAGTACCACGCGCT
CTCCAGCCCCATGGCCGCGCTGCTGTCCCCCCAGTCTCCGCTGGTCCATGCCGCCAGCTAAGTCGGT-CGCCACGGTCGG
TCAAGTGAGCCGCACGTACATTTG-----GTACGTACACACTTTTTTCGATCGCATGCATGCATGGCACGGTGCACGCAT
GGGGCCAGGG----TGCATGCGATTGTTTTGGAAGGTTTAGACATGCGAAATGCAGCATGTAG----------TAGCGTA
ACGTTTTACGGAGGTTGCAATGGCGCCCGATGTGGGC-AAGCCGTGTGTGACCACGCATGGTATTACCATCATCTTAGTT
TTGT---TTATGGTTTGGTTTGGTCTGATCGGATCAAGGCTTCTCGATCAGATCCTGTAATAAACTTGTACCGAGGTAC-
---AAGATTGATGTTGTCTA---------------GGTCCATGTTGTACCACATACCGCAGGAGTGATGAGTTTAAACTT
A-------GTTTATCTACATTTGTTATTAAAACACAATCCGGTATGAGTTGTTAAACTTTGTTGTCGTCCTCGCATGACG
ATGACGACTACTACTGCTACCAT---CACCACCACCACCACTTCTTCTTAAGCCGCAATAGCCTCCTAACTCCAATCTTC
GTTCTAACCCATCCCGCCCCACCCTGCACGCATTTACGCTCTCGTTGCTCTCCAACTC----------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----------S------------------S------S-----S-----S------------SSS-------
----------------S--------SS-SSS-SSSSSSSSSSSSSS-----S----------------------------
-----------S-------S-------S--------SSSSSS--------------------------------------
--S------S------------------------S----------------------S----------------------
----------------------------------------S---------------------------------------
S----------S------------------------SS--------S-------S---SS--------------------
--------S------------------------S--------------------------------------S-------
----------S---S----------------------S---------S-------------------------SS-----
---------------------------------SS---------------------------S-----------------
--------------S--------------------------------------------------------S--------
---------------------------S-------S------------------------------S--------SS---
--S---------S-----------------------------------S-------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------------------------------------S-S----
------S-------SSSS-------------------------------SSS---------------S----S-S-----
--------------------------------------------------------S-----------------------
-------------------------------------------------------------SSSS-SSSS----------
-------------S-----------SSS---------S-S-------------------------S--------------
------S----------S-------------------------S--S----S--S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SSSS--
--------------------------------------------------------------S-------S---------
-------S--------SS--------SS---------------------------SSSSSS-------------------
---------S---S------------------S------------------S--SS------------------S-----
-------------------S-----------------S------------------------------------------
-------S----------S----------------------S--------------------------------------
---------S------------------------------------------------------------SS--------
------S-----------------------------------S-------------------------------------
----------------------------S-----S---------S------------S------S---------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
----------------S---------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------------------S------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------S-----------------
---------------------------S--------------S-------------------SSSSSS------------
-------------S----------SSSSS--------S------------------------S-----------------
------S--SSSS-------------------------------------------------SSSSSSSSSSS-------
---------------------------------SS-SS-----------------------------SS-----------
-S--SSS-----------------------------------------------------------------S------S
SSS--S----------------------S-------------------------S-----S------S------------
S-----S--------------------------S----SS----------------S--------------S--S-----
------S----------S-----SSS--------------------------------------S--------------S
----S-----S-----------------------S--S--------S---S----------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_678
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------------------TCACGGAAGTTTCTTCCCCG------------------------------------------
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>reverse_2170
--------------------------------------------------------------------------------
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---------GCATAGCGCAACAACGTACG---------------------------------------------------
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>forward_963
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCCCATCCTCTGCCTCT
CTC-----------------------------------------------------------------------------
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>reverse_2955
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GATCAT
CCGCAAGGTGAAGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_2232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTCATCAGGCCTGACGTACG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_4085
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTCCGACGTGAGGGAATAGC--------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
