Multiple sequence alignment - TraesCS2A01G396100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G396100 chr2A 100.000 2916 0 0 1 2916 649564882 649561967 0.000000e+00 5385.0
1 TraesCS2A01G396100 chr2A 73.824 489 72 35 379 833 662895769 662895303 3.030000e-30 143.0
2 TraesCS2A01G396100 chr2A 97.222 36 0 1 2453 2488 649562389 649562355 3.140000e-05 60.2
3 TraesCS2A01G396100 chr2A 97.222 36 0 1 2494 2528 649562430 649562395 3.140000e-05 60.2
4 TraesCS2A01G396100 chr2A 100.000 31 0 0 2767 2797 649562089 649562059 1.130000e-04 58.4
5 TraesCS2A01G396100 chr2A 100.000 31 0 0 2794 2824 649562116 649562086 1.130000e-04 58.4
6 TraesCS2A01G396100 chr2B 87.505 2473 171 64 1 2392 592372229 592369814 0.000000e+00 2728.0
7 TraesCS2A01G396100 chr2D 91.071 784 56 8 1495 2269 503548434 503547656 0.000000e+00 1048.0
8 TraesCS2A01G396100 chr2D 83.374 409 47 9 2399 2797 503542067 503541670 2.760000e-95 359.0
9 TraesCS2A01G396100 chr2D 94.737 114 4 1 2265 2378 503543232 503543121 2.990000e-40 176.0
10 TraesCS2A01G396100 chr2D 82.979 141 15 8 703 840 110962197 110962331 5.100000e-23 119.0
11 TraesCS2A01G396100 chr2D 97.222 36 1 0 2453 2488 503541975 503541940 8.730000e-06 62.1
12 TraesCS2A01G396100 chr7A 75.294 595 93 37 287 840 720982267 720982848 4.860000e-58 235.0
13 TraesCS2A01G396100 chr6A 78.061 392 59 22 291 670 2907269 2906893 3.780000e-54 222.0
14 TraesCS2A01G396100 chr6A 72.407 511 88 43 380 857 608121254 608120764 2.380000e-21 113.0
15 TraesCS2A01G396100 chr6A 74.336 226 41 15 363 585 67122833 67122622 2.410000e-11 80.5
16 TraesCS2A01G396100 chr1D 77.812 329 58 13 235 558 450026921 450026603 3.840000e-44 189.0
17 TraesCS2A01G396100 chr1D 79.730 148 22 7 504 648 41335710 41335568 1.850000e-17 100.0
18 TraesCS2A01G396100 chr3A 80.147 272 36 15 288 553 131769927 131770186 1.380000e-43 187.0
19 TraesCS2A01G396100 chr4D 79.389 262 42 11 461 717 475199261 475199007 1.070000e-39 174.0
20 TraesCS2A01G396100 chr5A 77.593 241 42 7 420 653 276642345 276642110 5.070000e-28 135.0
21 TraesCS2A01G396100 chr6D 70.878 649 149 37 189 823 298624198 298624820 6.560000e-27 132.0
22 TraesCS2A01G396100 chr6D 73.699 346 71 17 485 823 298624122 298624454 1.840000e-22 117.0
23 TraesCS2A01G396100 chr7D 74.788 353 56 24 481 824 155263008 155262680 8.480000e-26 128.0
24 TraesCS2A01G396100 chr3D 81.065 169 24 6 492 657 112325248 112325085 8.480000e-26 128.0
25 TraesCS2A01G396100 chr7B 81.250 160 24 6 552 708 138749550 138749706 1.100000e-24 124.0
26 TraesCS2A01G396100 chr7B 83.621 116 18 1 188 303 688122654 688122768 1.100000e-19 108.0
27 TraesCS2A01G396100 chr5D 82.353 136 16 7 726 857 478211457 478211326 8.540000e-21 111.0
28 TraesCS2A01G396100 chr6B 82.222 135 16 6 730 857 704047629 704047762 3.070000e-20 110.0
29 TraesCS2A01G396100 chr6B 87.324 71 8 1 219 289 487000271 487000202 2.410000e-11 80.5
30 TraesCS2A01G396100 chr4B 75.185 270 45 18 602 857 47644282 47644543 1.100000e-19 108.0
31 TraesCS2A01G396100 chr1A 76.166 193 35 10 484 671 40982738 40982552 1.110000e-14 91.6
32 TraesCS2A01G396100 chr3B 87.500 56 4 3 249 302 53482945 53482999 8.730000e-06 62.1
33 TraesCS2A01G396100 chr3B 100.000 28 0 0 275 302 53492934 53492961 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G396100 chr2A 649561967 649564882 2915 True 1124.44 5385 98.8888 1 2916 5 chr2A.!!$R2 2915
1 TraesCS2A01G396100 chr2B 592369814 592372229 2415 True 2728.00 2728 87.5050 1 2392 1 chr2B.!!$R1 2391
2 TraesCS2A01G396100 chr2D 503547656 503548434 778 True 1048.00 1048 91.0710 1495 2269 1 chr2D.!!$R1 774
3 TraesCS2A01G396100 chr7A 720982267 720982848 581 False 235.00 235 75.2940 287 840 1 chr7A.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 1207 0.25051 GGGATCGGGCTCTTCCATTC 60.251 60.0 4.96 0.0 36.21 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2847 3137 0.029567 GGTGAGATCGCTACGACCTG 59.97 60.0 0.0 0.0 39.18 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 6.937886 TCGTTGGTTTTCTGTTTCTTTTTC 57.062 33.333 0.00 0.00 0.00 2.29
142 144 8.716909 TGTTTCATTTGTTTTCTTTTGTTCTCC 58.283 29.630 0.00 0.00 0.00 3.71
145 147 9.500785 TTCATTTGTTTTCTTTTGTTCTCCTTT 57.499 25.926 0.00 0.00 0.00 3.11
150 152 8.810990 TGTTTTCTTTTGTTCTCCTTTAGGTA 57.189 30.769 0.00 0.00 36.34 3.08
152 154 9.894783 GTTTTCTTTTGTTCTCCTTTAGGTATC 57.105 33.333 0.00 0.00 36.34 2.24
156 158 8.390921 TCTTTTGTTCTCCTTTAGGTATCCATT 58.609 33.333 0.00 0.00 36.34 3.16
178 180 8.442384 CCATTGTTGTTCTATAAACATTTTGGC 58.558 33.333 0.00 0.00 36.26 4.52
241 243 9.905713 AATATTGACATTTACTGAGTACATGGT 57.094 29.630 19.47 8.12 32.46 3.55
242 244 7.849804 ATTGACATTTACTGAGTACATGGTC 57.150 36.000 19.47 14.81 32.46 4.02
243 245 6.353404 TGACATTTACTGAGTACATGGTCA 57.647 37.500 19.47 16.56 32.46 4.02
244 246 6.764379 TGACATTTACTGAGTACATGGTCAA 58.236 36.000 19.47 0.00 32.46 3.18
245 247 6.649141 TGACATTTACTGAGTACATGGTCAAC 59.351 38.462 19.47 8.52 32.46 3.18
246 248 6.769512 ACATTTACTGAGTACATGGTCAACT 58.230 36.000 19.47 0.00 32.46 3.16
247 249 7.224297 ACATTTACTGAGTACATGGTCAACTT 58.776 34.615 19.47 0.00 32.46 2.66
248 250 7.719633 ACATTTACTGAGTACATGGTCAACTTT 59.280 33.333 19.47 0.00 32.46 2.66
249 251 8.567948 CATTTACTGAGTACATGGTCAACTTTT 58.432 33.333 10.20 0.00 0.00 2.27
250 252 8.514330 TTTACTGAGTACATGGTCAACTTTTT 57.486 30.769 0.00 0.00 0.00 1.94
878 1122 3.545703 GTGCAACTGGCCTATGATAAGT 58.454 45.455 3.32 0.00 43.89 2.24
884 1128 4.483950 ACTGGCCTATGATAAGTGCTAGA 58.516 43.478 3.32 0.00 34.96 2.43
885 1129 4.526262 ACTGGCCTATGATAAGTGCTAGAG 59.474 45.833 3.32 0.00 34.96 2.43
887 1131 4.901849 TGGCCTATGATAAGTGCTAGAGTT 59.098 41.667 3.32 0.00 0.00 3.01
889 1133 5.698545 GGCCTATGATAAGTGCTAGAGTTTG 59.301 44.000 0.00 0.00 0.00 2.93
906 1150 1.474332 TTGACGGGCCGGTAAGACTT 61.474 55.000 31.78 5.90 0.00 3.01
915 1159 4.141869 GGGCCGGTAAGACTTATTTCAGTA 60.142 45.833 1.90 0.00 0.00 2.74
916 1160 5.454329 GGGCCGGTAAGACTTATTTCAGTAT 60.454 44.000 1.90 0.00 0.00 2.12
931 1175 3.861846 TCAGTATGATATGGGCCAGACT 58.138 45.455 13.78 5.32 42.56 3.24
932 1176 4.234550 TCAGTATGATATGGGCCAGACTT 58.765 43.478 13.78 6.69 42.56 3.01
933 1177 5.402630 TCAGTATGATATGGGCCAGACTTA 58.597 41.667 13.78 0.00 42.56 2.24
934 1178 6.025539 TCAGTATGATATGGGCCAGACTTAT 58.974 40.000 13.78 4.50 42.56 1.73
935 1179 6.501805 TCAGTATGATATGGGCCAGACTTATT 59.498 38.462 13.78 0.00 42.56 1.40
936 1180 7.017551 TCAGTATGATATGGGCCAGACTTATTT 59.982 37.037 13.78 0.00 42.56 1.40
937 1181 7.667219 CAGTATGATATGGGCCAGACTTATTTT 59.333 37.037 13.78 0.00 39.69 1.82
938 1182 8.890472 AGTATGATATGGGCCAGACTTATTTTA 58.110 33.333 13.78 0.00 31.60 1.52
939 1183 9.515226 GTATGATATGGGCCAGACTTATTTTAA 57.485 33.333 13.78 0.00 0.00 1.52
941 1185 8.232913 TGATATGGGCCAGACTTATTTTAAAC 57.767 34.615 13.78 0.00 0.00 2.01
942 1186 5.576447 ATGGGCCAGACTTATTTTAAACG 57.424 39.130 13.78 0.00 0.00 3.60
943 1187 4.653868 TGGGCCAGACTTATTTTAAACGA 58.346 39.130 0.00 0.00 0.00 3.85
944 1188 4.698304 TGGGCCAGACTTATTTTAAACGAG 59.302 41.667 0.00 0.00 0.00 4.18
945 1189 4.095932 GGGCCAGACTTATTTTAAACGAGG 59.904 45.833 4.39 0.00 0.00 4.63
950 1194 6.018994 CCAGACTTATTTTAAACGAGGGATCG 60.019 42.308 0.00 0.00 39.31 3.69
963 1207 0.250510 GGGATCGGGCTCTTCCATTC 60.251 60.000 4.96 0.00 36.21 2.67
971 1215 3.181461 CGGGCTCTTCCATTCAGATAAGT 60.181 47.826 0.00 0.00 36.21 2.24
973 1217 4.102367 GGGCTCTTCCATTCAGATAAGTCT 59.898 45.833 0.00 0.00 36.21 3.24
1004 1248 1.129437 GTCTGCCAGCGAAAAGATGAC 59.871 52.381 0.00 0.00 38.85 3.06
1005 1249 1.002430 TCTGCCAGCGAAAAGATGACT 59.998 47.619 0.00 0.00 38.85 3.41
1150 1394 0.647410 CACGATTCACATCCGTGCTC 59.353 55.000 0.00 0.00 45.26 4.26
1153 1397 1.576356 GATTCACATCCGTGCTCTCC 58.424 55.000 0.00 0.00 43.28 3.71
1158 1402 1.478510 CACATCCGTGCTCTCCTAGTT 59.521 52.381 0.00 0.00 36.06 2.24
1173 1425 3.461085 TCCTAGTTGTAGGTCCGGTATCT 59.539 47.826 0.00 0.00 45.75 1.98
1174 1426 4.660303 TCCTAGTTGTAGGTCCGGTATCTA 59.340 45.833 0.00 0.00 45.75 1.98
1177 1429 3.956848 AGTTGTAGGTCCGGTATCTAACC 59.043 47.826 0.00 0.00 45.77 2.85
1238 1492 8.193438 CCTCAGATTTCTCTTGTTTTTGTTCTT 58.807 33.333 0.00 0.00 0.00 2.52
1240 1494 8.739039 TCAGATTTCTCTTGTTTTTGTTCTTGA 58.261 29.630 0.00 0.00 0.00 3.02
1265 1519 4.275689 TGATTGTTCATTTGAGACGCAACT 59.724 37.500 0.00 0.00 35.91 3.16
1273 1527 2.671130 TGAGACGCAACTGATATGCA 57.329 45.000 0.00 0.00 44.01 3.96
1275 1529 4.320608 TGAGACGCAACTGATATGCATA 57.679 40.909 9.27 9.27 44.01 3.14
1277 1531 6.024552 TGAGACGCAACTGATATGCATATA 57.975 37.500 19.12 7.31 44.01 0.86
1297 1551 1.089112 TGCGCATGGAAATGAGACTG 58.911 50.000 5.66 0.00 0.00 3.51
1298 1552 1.338960 TGCGCATGGAAATGAGACTGA 60.339 47.619 5.66 0.00 0.00 3.41
1306 1560 6.319658 GCATGGAAATGAGACTGAGGAAAATA 59.680 38.462 0.00 0.00 0.00 1.40
1307 1561 7.014038 GCATGGAAATGAGACTGAGGAAAATAT 59.986 37.037 0.00 0.00 0.00 1.28
1321 1575 5.621193 AGGAAAATATATGAAGGGACGGTG 58.379 41.667 0.00 0.00 0.00 4.94
1323 1577 5.238650 GGAAAATATATGAAGGGACGGTGTG 59.761 44.000 0.00 0.00 0.00 3.82
1326 1580 6.928348 AATATATGAAGGGACGGTGTGATA 57.072 37.500 0.00 0.00 0.00 2.15
1327 1581 6.928348 ATATATGAAGGGACGGTGTGATAA 57.072 37.500 0.00 0.00 0.00 1.75
1328 1582 3.543680 ATGAAGGGACGGTGTGATAAG 57.456 47.619 0.00 0.00 0.00 1.73
1329 1583 1.553248 TGAAGGGACGGTGTGATAAGG 59.447 52.381 0.00 0.00 0.00 2.69
1330 1584 1.829222 GAAGGGACGGTGTGATAAGGA 59.171 52.381 0.00 0.00 0.00 3.36
1331 1585 1.946984 AGGGACGGTGTGATAAGGAA 58.053 50.000 0.00 0.00 0.00 3.36
1340 1594 6.478129 ACGGTGTGATAAGGAATTTTAGGAA 58.522 36.000 0.00 0.00 0.00 3.36
1396 1650 2.681152 AGATTTTGTTGTTCGTCGCC 57.319 45.000 0.00 0.00 0.00 5.54
1398 1652 2.032030 AGATTTTGTTGTTCGTCGCCAG 60.032 45.455 0.00 0.00 0.00 4.85
1420 1674 0.179015 TGGCCCGTTTCTTGTTGCTA 60.179 50.000 0.00 0.00 0.00 3.49
1429 1683 6.381801 CCGTTTCTTGTTGCTATCTGAATTT 58.618 36.000 0.00 0.00 0.00 1.82
1513 1792 5.883661 ACATATCACTTGTTGCATGCTTAC 58.116 37.500 20.33 16.74 0.00 2.34
1576 1855 1.103398 GCACGAATTCCATGAGGGGG 61.103 60.000 8.25 0.00 37.22 5.40
1579 1858 0.839946 CGAATTCCATGAGGGGGAGT 59.160 55.000 0.00 0.00 35.46 3.85
1680 1959 5.521010 TCAATTTGCTTTGCTTGAGAGTTTG 59.479 36.000 0.00 0.00 0.00 2.93
1692 1971 3.733337 TGAGAGTTTGAAGAACCAGCTC 58.267 45.455 0.00 0.00 0.00 4.09
1756 2035 4.406003 ACGATTACTACTCCCAAGAAGCAT 59.594 41.667 0.00 0.00 0.00 3.79
1831 2110 2.507102 CTCGTCGCATTCAGCCGT 60.507 61.111 0.00 0.00 41.38 5.68
1954 2233 0.401356 TGTTGCCCATGCTCTTCTCA 59.599 50.000 0.00 0.00 38.71 3.27
1966 2245 2.096019 GCTCTTCTCAGTTTTTCCGCAG 60.096 50.000 0.00 0.00 0.00 5.18
1969 2248 0.531974 TCTCAGTTTTTCCGCAGCGT 60.532 50.000 15.05 0.00 0.00 5.07
1986 2276 5.627172 GCAGCGTAGTGACATAAAATTCAA 58.373 37.500 0.00 0.00 0.00 2.69
2046 2336 1.271217 GGTTACTTTTCGGAGCCTGGT 60.271 52.381 0.00 0.00 0.00 4.00
2142 2432 8.677148 AATGTAGTAGTCTTTTGTGTGACAAT 57.323 30.769 0.00 0.00 38.00 2.71
2218 2508 2.808543 GTGAATCCATATGGGCTCGTTC 59.191 50.000 21.78 16.39 36.21 3.95
2221 2511 0.104120 TCCATATGGGCTCGTTCACG 59.896 55.000 21.78 0.00 37.35 4.35
2282 2572 1.065251 CGGTAAGAACCTCTAGCCGAC 59.935 57.143 11.20 0.00 42.50 4.79
2283 2573 1.408340 GGTAAGAACCTCTAGCCGACC 59.592 57.143 0.00 0.00 43.08 4.79
2296 2586 1.049402 GCCGACCCCTAGAAAGCTAT 58.951 55.000 0.00 0.00 0.00 2.97
2297 2587 2.158355 AGCCGACCCCTAGAAAGCTATA 60.158 50.000 0.00 0.00 0.00 1.31
2298 2588 2.029200 GCCGACCCCTAGAAAGCTATAC 60.029 54.545 0.00 0.00 0.00 1.47
2299 2589 3.498334 CCGACCCCTAGAAAGCTATACT 58.502 50.000 0.00 0.00 0.00 2.12
2306 2596 6.183360 ACCCCTAGAAAGCTATACTTACAACG 60.183 42.308 0.00 0.00 37.75 4.10
2317 2607 9.662947 AGCTATACTTACAACGGAGTAAAATTT 57.337 29.630 0.00 0.00 45.00 1.82
2346 2636 3.390819 ACCCCACTAAACCGGATCTAAT 58.609 45.455 9.46 0.00 0.00 1.73
2399 2689 5.461032 AAAATTTGTTCCCGCTTATGTGA 57.539 34.783 0.00 0.00 0.00 3.58
2400 2690 4.701956 AATTTGTTCCCGCTTATGTGAG 57.298 40.909 0.00 0.00 0.00 3.51
2401 2691 3.410631 TTTGTTCCCGCTTATGTGAGA 57.589 42.857 0.00 0.00 0.00 3.27
2402 2692 3.627395 TTGTTCCCGCTTATGTGAGAT 57.373 42.857 0.00 0.00 0.00 2.75
2403 2693 3.179443 TGTTCCCGCTTATGTGAGATC 57.821 47.619 0.00 0.00 0.00 2.75
2404 2694 2.499693 TGTTCCCGCTTATGTGAGATCA 59.500 45.455 0.00 0.00 0.00 2.92
2405 2695 3.126831 GTTCCCGCTTATGTGAGATCAG 58.873 50.000 0.00 0.00 0.00 2.90
2406 2696 1.069204 TCCCGCTTATGTGAGATCAGC 59.931 52.381 0.00 0.00 0.00 4.26
2407 2697 1.069823 CCCGCTTATGTGAGATCAGCT 59.930 52.381 0.00 0.00 0.00 4.24
2408 2698 2.297315 CCCGCTTATGTGAGATCAGCTA 59.703 50.000 0.00 0.00 0.00 3.32
2409 2699 3.243873 CCCGCTTATGTGAGATCAGCTAA 60.244 47.826 0.00 0.00 0.00 3.09
2410 2700 4.371786 CCGCTTATGTGAGATCAGCTAAA 58.628 43.478 0.00 0.00 0.00 1.85
2411 2701 4.447054 CCGCTTATGTGAGATCAGCTAAAG 59.553 45.833 0.00 0.00 0.00 1.85
2412 2702 5.284864 CGCTTATGTGAGATCAGCTAAAGA 58.715 41.667 0.00 0.00 0.00 2.52
2413 2703 5.925397 CGCTTATGTGAGATCAGCTAAAGAT 59.075 40.000 0.00 0.00 0.00 2.40
2414 2704 6.089283 CGCTTATGTGAGATCAGCTAAAGATC 59.911 42.308 4.71 4.71 41.68 2.75
2415 2705 6.368516 GCTTATGTGAGATCAGCTAAAGATCC 59.631 42.308 8.51 2.78 42.19 3.36
2416 2706 7.609097 TTATGTGAGATCAGCTAAAGATCCT 57.391 36.000 8.51 0.00 42.19 3.24
2417 2707 5.528043 TGTGAGATCAGCTAAAGATCCTC 57.472 43.478 8.51 6.86 42.19 3.71
2418 2708 5.207354 TGTGAGATCAGCTAAAGATCCTCT 58.793 41.667 8.51 0.00 42.19 3.69
2419 2709 6.368805 TGTGAGATCAGCTAAAGATCCTCTA 58.631 40.000 8.51 0.00 42.19 2.43
2420 2710 6.836007 TGTGAGATCAGCTAAAGATCCTCTAA 59.164 38.462 8.51 0.00 42.19 2.10
2421 2711 7.014134 TGTGAGATCAGCTAAAGATCCTCTAAG 59.986 40.741 8.51 0.00 42.19 2.18
2422 2712 6.493115 TGAGATCAGCTAAAGATCCTCTAAGG 59.507 42.308 8.51 0.00 42.19 2.69
2423 2713 6.381250 AGATCAGCTAAAGATCCTCTAAGGT 58.619 40.000 8.51 0.00 42.19 3.50
2424 2714 5.860941 TCAGCTAAAGATCCTCTAAGGTG 57.139 43.478 10.22 10.22 38.45 4.00
2425 2715 5.519808 TCAGCTAAAGATCCTCTAAGGTGA 58.480 41.667 13.18 13.18 41.09 4.02
2426 2716 6.139671 TCAGCTAAAGATCCTCTAAGGTGAT 58.860 40.000 13.18 0.00 39.78 3.06
2427 2717 6.041409 TCAGCTAAAGATCCTCTAAGGTGATG 59.959 42.308 13.18 0.00 39.78 3.07
2428 2718 5.902431 AGCTAAAGATCCTCTAAGGTGATGT 59.098 40.000 0.00 0.00 36.53 3.06
2429 2719 7.014711 CAGCTAAAGATCCTCTAAGGTGATGTA 59.985 40.741 10.68 0.00 38.95 2.29
2430 2720 7.732593 AGCTAAAGATCCTCTAAGGTGATGTAT 59.267 37.037 0.00 0.00 36.53 2.29
2431 2721 8.371699 GCTAAAGATCCTCTAAGGTGATGTATT 58.628 37.037 0.00 0.00 36.53 1.89
2434 2724 7.309770 AGATCCTCTAAGGTGATGTATTTCC 57.690 40.000 0.00 0.00 36.53 3.13
2435 2725 7.079048 AGATCCTCTAAGGTGATGTATTTCCT 58.921 38.462 0.00 0.00 36.53 3.36
2436 2726 6.732896 TCCTCTAAGGTGATGTATTTCCTC 57.267 41.667 0.00 0.00 36.53 3.71
2437 2727 6.444704 TCCTCTAAGGTGATGTATTTCCTCT 58.555 40.000 0.00 0.00 36.53 3.69
2438 2728 6.551601 TCCTCTAAGGTGATGTATTTCCTCTC 59.448 42.308 0.00 0.00 36.53 3.20
2439 2729 6.239458 CCTCTAAGGTGATGTATTTCCTCTCC 60.239 46.154 0.00 0.00 0.00 3.71
2440 2730 4.779993 AAGGTGATGTATTTCCTCTCCC 57.220 45.455 0.00 0.00 0.00 4.30
2441 2731 2.700897 AGGTGATGTATTTCCTCTCCCG 59.299 50.000 0.00 0.00 0.00 5.14
2442 2732 2.484889 GTGATGTATTTCCTCTCCCGC 58.515 52.381 0.00 0.00 0.00 6.13
2443 2733 2.103263 GTGATGTATTTCCTCTCCCGCT 59.897 50.000 0.00 0.00 0.00 5.52
2444 2734 2.771943 TGATGTATTTCCTCTCCCGCTT 59.228 45.455 0.00 0.00 0.00 4.68
2445 2735 2.981859 TGTATTTCCTCTCCCGCTTC 57.018 50.000 0.00 0.00 0.00 3.86
2446 2736 2.184533 TGTATTTCCTCTCCCGCTTCA 58.815 47.619 0.00 0.00 0.00 3.02
2447 2737 2.771943 TGTATTTCCTCTCCCGCTTCAT 59.228 45.455 0.00 0.00 0.00 2.57
2448 2738 3.199946 TGTATTTCCTCTCCCGCTTCATT 59.800 43.478 0.00 0.00 0.00 2.57
2449 2739 2.113860 TTTCCTCTCCCGCTTCATTG 57.886 50.000 0.00 0.00 0.00 2.82
2450 2740 0.392998 TTCCTCTCCCGCTTCATTGC 60.393 55.000 0.00 0.00 0.00 3.56
2451 2741 1.821332 CCTCTCCCGCTTCATTGCC 60.821 63.158 0.00 0.00 0.00 4.52
2452 2742 1.222936 CTCTCCCGCTTCATTGCCT 59.777 57.895 0.00 0.00 0.00 4.75
2453 2743 0.813210 CTCTCCCGCTTCATTGCCTC 60.813 60.000 0.00 0.00 0.00 4.70
2454 2744 1.078214 CTCCCGCTTCATTGCCTCA 60.078 57.895 0.00 0.00 0.00 3.86
2455 2745 0.677731 CTCCCGCTTCATTGCCTCAA 60.678 55.000 0.00 0.00 0.00 3.02
2456 2746 0.251121 TCCCGCTTCATTGCCTCAAA 60.251 50.000 0.00 0.00 0.00 2.69
2457 2747 0.602562 CCCGCTTCATTGCCTCAAAA 59.397 50.000 0.00 0.00 0.00 2.44
2458 2748 1.205417 CCCGCTTCATTGCCTCAAAAT 59.795 47.619 0.00 0.00 0.00 1.82
2459 2749 2.264813 CCGCTTCATTGCCTCAAAATG 58.735 47.619 0.00 0.00 36.54 2.32
2460 2750 2.264813 CGCTTCATTGCCTCAAAATGG 58.735 47.619 0.00 0.00 36.01 3.16
2483 2773 4.755656 CCATGGGTTGGTACACCC 57.244 61.111 13.42 13.42 45.59 4.61
2491 2781 1.965643 GGTTGGTACACCCCTTTTTCC 59.034 52.381 0.00 0.00 39.29 3.13
2492 2782 2.668625 GTTGGTACACCCCTTTTTCCA 58.331 47.619 0.00 0.00 39.29 3.53
2493 2783 3.236047 GTTGGTACACCCCTTTTTCCAT 58.764 45.455 0.00 0.00 39.29 3.41
2494 2784 3.163616 TGGTACACCCCTTTTTCCATC 57.836 47.619 0.00 0.00 34.29 3.51
2495 2785 2.447429 TGGTACACCCCTTTTTCCATCA 59.553 45.455 0.00 0.00 34.29 3.07
2496 2786 3.117093 TGGTACACCCCTTTTTCCATCAA 60.117 43.478 0.00 0.00 34.29 2.57
2497 2787 3.898741 GGTACACCCCTTTTTCCATCAAA 59.101 43.478 0.00 0.00 0.00 2.69
2498 2788 4.345547 GGTACACCCCTTTTTCCATCAAAA 59.654 41.667 0.00 0.00 31.73 2.44
2499 2789 5.012664 GGTACACCCCTTTTTCCATCAAAAT 59.987 40.000 0.00 0.00 33.82 1.82
2500 2790 4.971939 ACACCCCTTTTTCCATCAAAATG 58.028 39.130 0.00 0.00 33.82 2.32
2524 2814 4.755656 CCATGGGTTGGTACACCC 57.244 61.111 13.42 13.42 45.59 4.61
2525 2815 2.083715 CCATGGGTTGGTACACCCT 58.916 57.895 19.39 5.55 42.24 4.34
2526 2816 0.407918 CCATGGGTTGGTACACCCTT 59.592 55.000 19.39 12.13 42.24 3.95
2527 2817 1.203125 CCATGGGTTGGTACACCCTTT 60.203 52.381 19.39 7.14 42.24 3.11
2528 2818 2.167662 CATGGGTTGGTACACCCTTTC 58.832 52.381 19.39 0.00 42.24 2.62
2529 2819 0.479378 TGGGTTGGTACACCCTTTCC 59.521 55.000 19.39 1.90 42.24 3.13
2530 2820 0.607217 GGGTTGGTACACCCTTTCCG 60.607 60.000 13.10 0.00 42.24 4.30
2531 2821 0.109153 GGTTGGTACACCCTTTCCGT 59.891 55.000 0.00 0.00 38.16 4.69
2532 2822 1.477377 GGTTGGTACACCCTTTCCGTT 60.477 52.381 0.00 0.00 38.16 4.44
2533 2823 2.300433 GTTGGTACACCCTTTCCGTTT 58.700 47.619 0.00 0.00 39.29 3.60
2534 2824 2.259266 TGGTACACCCTTTCCGTTTC 57.741 50.000 0.00 0.00 34.29 2.78
2535 2825 1.489649 TGGTACACCCTTTCCGTTTCA 59.510 47.619 0.00 0.00 34.29 2.69
2536 2826 1.875514 GGTACACCCTTTCCGTTTCAC 59.124 52.381 0.00 0.00 0.00 3.18
2537 2827 1.528161 GTACACCCTTTCCGTTTCACG 59.472 52.381 0.00 0.00 42.11 4.35
2552 2842 4.147135 ACGGAGTGCCAGGGTTAT 57.853 55.556 0.00 0.00 42.51 1.89
2553 2843 1.905512 ACGGAGTGCCAGGGTTATC 59.094 57.895 0.00 0.00 42.51 1.75
2554 2844 0.617820 ACGGAGTGCCAGGGTTATCT 60.618 55.000 0.00 0.00 42.51 1.98
2555 2845 0.541863 CGGAGTGCCAGGGTTATCTT 59.458 55.000 0.00 0.00 0.00 2.40
2556 2846 1.065418 CGGAGTGCCAGGGTTATCTTT 60.065 52.381 0.00 0.00 0.00 2.52
2557 2847 2.369394 GGAGTGCCAGGGTTATCTTTG 58.631 52.381 0.00 0.00 0.00 2.77
2558 2848 1.745653 GAGTGCCAGGGTTATCTTTGC 59.254 52.381 0.00 0.00 0.00 3.68
2559 2849 0.451783 GTGCCAGGGTTATCTTTGCG 59.548 55.000 0.00 0.00 0.00 4.85
2560 2850 0.679640 TGCCAGGGTTATCTTTGCGG 60.680 55.000 0.00 0.00 0.00 5.69
2561 2851 2.004808 GCCAGGGTTATCTTTGCGGC 62.005 60.000 0.00 0.00 0.00 6.53
2562 2852 1.384222 CCAGGGTTATCTTTGCGGCC 61.384 60.000 0.00 0.00 0.00 6.13
2563 2853 0.394352 CAGGGTTATCTTTGCGGCCT 60.394 55.000 0.00 0.00 0.00 5.19
2564 2854 0.394352 AGGGTTATCTTTGCGGCCTG 60.394 55.000 0.00 0.00 0.00 4.85
2565 2855 1.433471 GGTTATCTTTGCGGCCTGC 59.567 57.895 11.92 11.92 46.70 4.85
2575 2865 4.147449 CGGCCTGCACGGAGATCA 62.147 66.667 0.00 0.00 33.16 2.92
2576 2866 2.512515 GGCCTGCACGGAGATCAC 60.513 66.667 0.00 0.00 33.16 3.06
2577 2867 2.887568 GCCTGCACGGAGATCACG 60.888 66.667 8.09 8.09 33.16 4.35
2578 2868 2.887568 CCTGCACGGAGATCACGC 60.888 66.667 9.38 0.00 33.16 5.34
2579 2869 2.182791 CTGCACGGAGATCACGCT 59.817 61.111 9.38 0.00 34.00 5.07
2580 2870 1.446792 CTGCACGGAGATCACGCTT 60.447 57.895 9.38 0.00 34.00 4.68
2581 2871 1.690283 CTGCACGGAGATCACGCTTG 61.690 60.000 9.38 3.60 34.00 4.01
2582 2872 2.456119 GCACGGAGATCACGCTTGG 61.456 63.158 9.38 0.07 34.00 3.61
2583 2873 1.079819 CACGGAGATCACGCTTGGT 60.080 57.895 9.38 0.00 34.00 3.67
2592 2882 3.965258 ACGCTTGGTGATGGGCCA 61.965 61.111 9.61 9.61 0.00 5.36
2593 2883 2.440796 CGCTTGGTGATGGGCCAT 60.441 61.111 21.39 21.39 35.71 4.40
2594 2884 2.777972 CGCTTGGTGATGGGCCATG 61.778 63.158 26.77 9.51 35.71 3.66
2595 2885 2.428925 GCTTGGTGATGGGCCATGG 61.429 63.158 26.77 7.63 35.71 3.66
2596 2886 2.364056 TTGGTGATGGGCCATGGC 60.364 61.111 29.47 29.47 35.71 4.40
2597 2887 2.866523 CTTGGTGATGGGCCATGGCT 62.867 60.000 34.70 17.16 41.60 4.75
2598 2888 1.579140 TTGGTGATGGGCCATGGCTA 61.579 55.000 34.70 24.25 41.60 3.93
2599 2889 1.229927 GGTGATGGGCCATGGCTAA 59.770 57.895 34.70 23.50 41.60 3.09
2600 2890 0.825010 GGTGATGGGCCATGGCTAAG 60.825 60.000 34.70 0.00 41.60 2.18
2601 2891 0.106519 GTGATGGGCCATGGCTAAGT 60.107 55.000 34.70 18.86 41.60 2.24
2602 2892 0.630673 TGATGGGCCATGGCTAAGTT 59.369 50.000 34.70 16.13 41.60 2.66
2603 2893 1.006998 TGATGGGCCATGGCTAAGTTT 59.993 47.619 34.70 14.73 41.60 2.66
2604 2894 2.110578 GATGGGCCATGGCTAAGTTTT 58.889 47.619 34.70 13.69 41.60 2.43
2605 2895 1.265236 TGGGCCATGGCTAAGTTTTG 58.735 50.000 34.70 0.00 41.60 2.44
2606 2896 0.536724 GGGCCATGGCTAAGTTTTGG 59.463 55.000 34.70 0.00 41.60 3.28
2607 2897 3.441244 GCCATGGCTAAGTTTTGGC 57.559 52.632 29.98 0.00 45.31 4.52
2608 2898 0.458370 GCCATGGCTAAGTTTTGGCG 60.458 55.000 29.98 0.00 42.97 5.69
2609 2899 0.887933 CCATGGCTAAGTTTTGGCGT 59.112 50.000 0.00 0.00 38.12 5.68
2610 2900 1.272212 CCATGGCTAAGTTTTGGCGTT 59.728 47.619 0.00 0.00 38.12 4.84
2611 2901 2.595386 CATGGCTAAGTTTTGGCGTTC 58.405 47.619 0.00 0.00 38.12 3.95
2612 2902 1.975660 TGGCTAAGTTTTGGCGTTCT 58.024 45.000 0.00 0.00 38.12 3.01
2613 2903 3.128852 TGGCTAAGTTTTGGCGTTCTA 57.871 42.857 0.00 0.00 38.12 2.10
2614 2904 3.071479 TGGCTAAGTTTTGGCGTTCTAG 58.929 45.455 0.00 0.00 38.12 2.43
2615 2905 3.244284 TGGCTAAGTTTTGGCGTTCTAGA 60.244 43.478 0.00 0.00 38.12 2.43
2616 2906 3.939592 GGCTAAGTTTTGGCGTTCTAGAT 59.060 43.478 0.00 0.00 38.12 1.98
2617 2907 5.114081 GGCTAAGTTTTGGCGTTCTAGATA 58.886 41.667 0.00 0.00 38.12 1.98
2618 2908 5.583457 GGCTAAGTTTTGGCGTTCTAGATAA 59.417 40.000 0.00 0.00 38.12 1.75
2619 2909 6.260271 GGCTAAGTTTTGGCGTTCTAGATAAT 59.740 38.462 0.00 0.00 38.12 1.28
2620 2910 7.440255 GGCTAAGTTTTGGCGTTCTAGATAATA 59.560 37.037 0.00 0.00 38.12 0.98
2621 2911 8.823818 GCTAAGTTTTGGCGTTCTAGATAATAA 58.176 33.333 0.00 0.00 0.00 1.40
2628 2918 8.758633 TTGGCGTTCTAGATAATAATTAGAGC 57.241 34.615 0.00 0.00 0.00 4.09
2629 2919 7.892609 TGGCGTTCTAGATAATAATTAGAGCA 58.107 34.615 0.00 0.00 0.00 4.26
2630 2920 8.531982 TGGCGTTCTAGATAATAATTAGAGCAT 58.468 33.333 0.00 0.00 0.00 3.79
2631 2921 9.026074 GGCGTTCTAGATAATAATTAGAGCATC 57.974 37.037 0.00 0.00 0.00 3.91
2632 2922 9.574458 GCGTTCTAGATAATAATTAGAGCATCA 57.426 33.333 0.00 0.00 37.82 3.07
2641 2931 7.934855 AATAATTAGAGCATCAATAGCTGGG 57.065 36.000 0.00 0.00 43.58 4.45
2642 2932 2.847327 TAGAGCATCAATAGCTGGGC 57.153 50.000 0.00 0.00 43.58 5.36
2643 2933 0.841961 AGAGCATCAATAGCTGGGCA 59.158 50.000 0.00 0.00 43.58 5.36
2644 2934 0.950116 GAGCATCAATAGCTGGGCAC 59.050 55.000 0.00 0.00 43.58 5.01
2645 2935 2.419854 GAGCATCAATAGCTGGGCACC 61.420 57.143 0.00 0.00 43.58 5.01
2662 2952 5.562506 GGCACCCTAAATCTGTCTTAAAC 57.437 43.478 0.00 0.00 0.00 2.01
2663 2953 4.094442 GGCACCCTAAATCTGTCTTAAACG 59.906 45.833 0.00 0.00 0.00 3.60
2664 2954 4.694037 GCACCCTAAATCTGTCTTAAACGT 59.306 41.667 0.00 0.00 0.00 3.99
2665 2955 5.163884 GCACCCTAAATCTGTCTTAAACGTC 60.164 44.000 0.00 0.00 0.00 4.34
2666 2956 5.350640 CACCCTAAATCTGTCTTAAACGTCC 59.649 44.000 0.00 0.00 0.00 4.79
2667 2957 5.012354 ACCCTAAATCTGTCTTAAACGTCCA 59.988 40.000 0.00 0.00 0.00 4.02
2668 2958 5.581085 CCCTAAATCTGTCTTAAACGTCCAG 59.419 44.000 0.00 0.00 0.00 3.86
2669 2959 5.063564 CCTAAATCTGTCTTAAACGTCCAGC 59.936 44.000 0.00 0.00 0.00 4.85
2671 2961 1.068474 CTGTCTTAAACGTCCAGCGG 58.932 55.000 0.00 0.00 46.52 5.52
2672 2962 0.947180 TGTCTTAAACGTCCAGCGGC 60.947 55.000 0.00 0.00 46.52 6.53
2673 2963 1.375013 TCTTAAACGTCCAGCGGCC 60.375 57.895 0.00 0.00 46.52 6.13
2674 2964 1.375523 CTTAAACGTCCAGCGGCCT 60.376 57.895 0.00 0.00 46.52 5.19
2675 2965 1.635663 CTTAAACGTCCAGCGGCCTG 61.636 60.000 0.00 0.00 46.52 4.85
2697 2987 2.452767 GGTCACCGACCGATCAAAC 58.547 57.895 0.00 0.00 43.14 2.93
2698 2988 0.320073 GGTCACCGACCGATCAAACA 60.320 55.000 0.00 0.00 43.14 2.83
2699 2989 1.504359 GTCACCGACCGATCAAACAA 58.496 50.000 0.00 0.00 0.00 2.83
2700 2990 1.868498 GTCACCGACCGATCAAACAAA 59.132 47.619 0.00 0.00 0.00 2.83
2701 2991 2.288458 GTCACCGACCGATCAAACAAAA 59.712 45.455 0.00 0.00 0.00 2.44
2702 2992 3.058501 GTCACCGACCGATCAAACAAAAT 60.059 43.478 0.00 0.00 0.00 1.82
2703 2993 3.566322 TCACCGACCGATCAAACAAAATT 59.434 39.130 0.00 0.00 0.00 1.82
2704 2994 3.668191 CACCGACCGATCAAACAAAATTG 59.332 43.478 0.00 0.00 0.00 2.32
2705 2995 3.566322 ACCGACCGATCAAACAAAATTGA 59.434 39.130 0.00 0.00 43.03 2.57
2706 2996 3.911964 CCGACCGATCAAACAAAATTGAC 59.088 43.478 0.00 0.00 41.78 3.18
2707 2997 4.320202 CCGACCGATCAAACAAAATTGACT 60.320 41.667 0.00 0.00 41.78 3.41
2708 2998 4.846137 CGACCGATCAAACAAAATTGACTC 59.154 41.667 0.00 0.00 41.78 3.36
2709 2999 5.559991 CGACCGATCAAACAAAATTGACTCA 60.560 40.000 0.00 0.00 41.78 3.41
2710 3000 5.762045 ACCGATCAAACAAAATTGACTCAG 58.238 37.500 0.00 0.00 41.78 3.35
2711 3001 5.530915 ACCGATCAAACAAAATTGACTCAGA 59.469 36.000 0.00 0.00 41.78 3.27
2712 3002 6.207417 ACCGATCAAACAAAATTGACTCAGAT 59.793 34.615 0.00 0.00 41.78 2.90
2713 3003 6.525628 CCGATCAAACAAAATTGACTCAGATG 59.474 38.462 0.00 0.00 41.78 2.90
2714 3004 6.525628 CGATCAAACAAAATTGACTCAGATGG 59.474 38.462 0.00 0.00 41.78 3.51
2715 3005 6.088016 TCAAACAAAATTGACTCAGATGGG 57.912 37.500 0.00 0.00 34.50 4.00
2716 3006 4.525912 AACAAAATTGACTCAGATGGGC 57.474 40.909 0.00 0.00 0.00 5.36
2717 3007 2.489329 ACAAAATTGACTCAGATGGGCG 59.511 45.455 0.00 0.00 0.00 6.13
2718 3008 2.489329 CAAAATTGACTCAGATGGGCGT 59.511 45.455 0.00 0.00 0.00 5.68
2719 3009 2.029838 AATTGACTCAGATGGGCGTC 57.970 50.000 0.00 0.00 0.00 5.19
2720 3010 1.198713 ATTGACTCAGATGGGCGTCT 58.801 50.000 0.00 0.00 0.00 4.18
2721 3011 0.976641 TTGACTCAGATGGGCGTCTT 59.023 50.000 0.00 0.00 0.00 3.01
2722 3012 1.847328 TGACTCAGATGGGCGTCTTA 58.153 50.000 0.00 0.00 0.00 2.10
2723 3013 2.176045 TGACTCAGATGGGCGTCTTAA 58.824 47.619 0.00 0.00 0.00 1.85
2724 3014 2.565391 TGACTCAGATGGGCGTCTTAAA 59.435 45.455 0.00 0.00 0.00 1.52
2725 3015 2.930682 GACTCAGATGGGCGTCTTAAAC 59.069 50.000 0.00 0.00 0.00 2.01
2737 3027 3.420839 GTCTTAAACGGGCATCCAATG 57.579 47.619 0.00 0.00 0.00 2.82
2746 3036 3.428797 CATCCAATGCCCGAGCTG 58.571 61.111 0.00 0.00 40.80 4.24
2747 3037 1.153107 CATCCAATGCCCGAGCTGA 60.153 57.895 0.00 0.00 40.80 4.26
2748 3038 1.153086 ATCCAATGCCCGAGCTGAC 60.153 57.895 0.00 0.00 40.80 3.51
2749 3039 2.615227 ATCCAATGCCCGAGCTGACC 62.615 60.000 0.00 0.00 40.80 4.02
2750 3040 3.197790 CAATGCCCGAGCTGACCG 61.198 66.667 0.00 0.00 40.80 4.79
2751 3041 4.473520 AATGCCCGAGCTGACCGG 62.474 66.667 0.00 0.00 46.10 5.28
2768 3058 2.321213 GGCAACGTCATATCCAGCC 58.679 57.895 0.00 0.00 0.00 4.85
2769 3059 1.166531 GGCAACGTCATATCCAGCCC 61.167 60.000 0.00 0.00 34.71 5.19
2770 3060 0.463654 GCAACGTCATATCCAGCCCA 60.464 55.000 0.00 0.00 0.00 5.36
2771 3061 2.016604 GCAACGTCATATCCAGCCCAA 61.017 52.381 0.00 0.00 0.00 4.12
2772 3062 2.364632 CAACGTCATATCCAGCCCAAA 58.635 47.619 0.00 0.00 0.00 3.28
2773 3063 2.752354 CAACGTCATATCCAGCCCAAAA 59.248 45.455 0.00 0.00 0.00 2.44
2774 3064 3.080300 ACGTCATATCCAGCCCAAAAA 57.920 42.857 0.00 0.00 0.00 1.94
2775 3065 3.631250 ACGTCATATCCAGCCCAAAAAT 58.369 40.909 0.00 0.00 0.00 1.82
2776 3066 3.381272 ACGTCATATCCAGCCCAAAAATG 59.619 43.478 0.00 0.00 0.00 2.32
2777 3067 3.381272 CGTCATATCCAGCCCAAAAATGT 59.619 43.478 0.00 0.00 0.00 2.71
2778 3068 4.685924 GTCATATCCAGCCCAAAAATGTG 58.314 43.478 0.00 0.00 0.00 3.21
2779 3069 3.132646 TCATATCCAGCCCAAAAATGTGC 59.867 43.478 0.00 0.00 0.00 4.57
2780 3070 0.614812 ATCCAGCCCAAAAATGTGCC 59.385 50.000 0.00 0.00 0.00 5.01
2781 3071 0.762082 TCCAGCCCAAAAATGTGCCA 60.762 50.000 0.00 0.00 0.00 4.92
2782 3072 0.320946 CCAGCCCAAAAATGTGCCAG 60.321 55.000 0.00 0.00 0.00 4.85
2783 3073 0.680618 CAGCCCAAAAATGTGCCAGA 59.319 50.000 0.00 0.00 0.00 3.86
2784 3074 1.276989 CAGCCCAAAAATGTGCCAGAT 59.723 47.619 0.00 0.00 0.00 2.90
2785 3075 2.496871 CAGCCCAAAAATGTGCCAGATA 59.503 45.455 0.00 0.00 0.00 1.98
2786 3076 3.133362 CAGCCCAAAAATGTGCCAGATAT 59.867 43.478 0.00 0.00 0.00 1.63
2787 3077 3.133362 AGCCCAAAAATGTGCCAGATATG 59.867 43.478 0.00 0.00 0.00 1.78
2788 3078 3.742013 GCCCAAAAATGTGCCAGATATGG 60.742 47.826 0.69 0.69 0.00 2.74
2789 3079 3.181463 CCCAAAAATGTGCCAGATATGGG 60.181 47.826 8.78 6.05 39.06 4.00
2790 3080 3.181463 CCAAAAATGTGCCAGATATGGGG 60.181 47.826 8.78 0.00 0.00 4.96
2791 3081 2.386829 AAATGTGCCAGATATGGGGG 57.613 50.000 8.78 0.00 0.00 5.40
2796 3086 4.351054 CCAGATATGGGGGCGCCC 62.351 72.222 38.57 38.57 44.51 6.13
2805 3095 2.047370 GGGGCGCCCAAAAATGTG 60.047 61.111 44.46 0.00 44.65 3.21
2806 3096 2.741985 GGGCGCCCAAAAATGTGC 60.742 61.111 40.73 8.62 37.27 4.57
2808 3098 2.030262 GCGCCCAAAAATGTGCCA 59.970 55.556 0.00 0.00 31.95 4.92
2809 3099 2.028733 GCGCCCAAAAATGTGCCAG 61.029 57.895 0.00 0.00 31.95 4.85
2810 3100 1.664873 CGCCCAAAAATGTGCCAGA 59.335 52.632 0.00 0.00 0.00 3.86
2811 3101 0.247185 CGCCCAAAAATGTGCCAGAT 59.753 50.000 0.00 0.00 0.00 2.90
2812 3102 1.476085 CGCCCAAAAATGTGCCAGATA 59.524 47.619 0.00 0.00 0.00 1.98
2813 3103 2.101249 CGCCCAAAAATGTGCCAGATAT 59.899 45.455 0.00 0.00 0.00 1.63
2814 3104 3.460103 GCCCAAAAATGTGCCAGATATG 58.540 45.455 0.00 0.00 0.00 1.78
2815 3105 3.742013 GCCCAAAAATGTGCCAGATATGG 60.742 47.826 0.69 0.69 0.00 2.74
2816 3106 3.181463 CCCAAAAATGTGCCAGATATGGG 60.181 47.826 8.78 6.05 39.06 4.00
2817 3107 3.181463 CCAAAAATGTGCCAGATATGGGG 60.181 47.826 8.78 0.00 0.00 4.96
2818 3108 2.386829 AAATGTGCCAGATATGGGGG 57.613 50.000 8.78 0.00 0.00 5.40
2823 3113 4.351054 CCAGATATGGGGGCGCCC 62.351 72.222 38.57 38.57 44.51 6.13
2824 3114 4.704833 CAGATATGGGGGCGCCCG 62.705 72.222 38.22 18.83 46.66 6.13
2854 3144 4.988598 CAGCCCGTTGCAGGTCGT 62.989 66.667 7.12 0.00 44.83 4.34
2855 3145 3.307906 AGCCCGTTGCAGGTCGTA 61.308 61.111 7.12 0.00 44.83 3.43
2856 3146 2.813908 GCCCGTTGCAGGTCGTAG 60.814 66.667 7.12 1.12 40.77 3.51
2857 3147 2.813908 CCCGTTGCAGGTCGTAGC 60.814 66.667 7.12 0.00 0.00 3.58
2858 3148 3.179265 CCGTTGCAGGTCGTAGCG 61.179 66.667 7.12 0.00 33.82 4.26
2859 3149 2.126618 CGTTGCAGGTCGTAGCGA 60.127 61.111 0.00 0.00 36.03 4.93
2860 3150 1.516386 CGTTGCAGGTCGTAGCGAT 60.516 57.895 0.00 0.00 38.42 4.58
2861 3151 1.472276 CGTTGCAGGTCGTAGCGATC 61.472 60.000 0.00 0.00 38.42 3.69
2863 3153 0.100682 TTGCAGGTCGTAGCGATCTC 59.899 55.000 0.94 0.00 44.51 2.75
2864 3154 1.029947 TGCAGGTCGTAGCGATCTCA 61.030 55.000 0.94 1.49 44.51 3.27
2865 3155 0.592754 GCAGGTCGTAGCGATCTCAC 60.593 60.000 0.94 0.00 44.51 3.51
2866 3156 0.029567 CAGGTCGTAGCGATCTCACC 59.970 60.000 0.94 0.00 44.51 4.02
2867 3157 0.107116 AGGTCGTAGCGATCTCACCT 60.107 55.000 0.00 0.00 44.51 4.00
2868 3158 0.029567 GGTCGTAGCGATCTCACCTG 59.970 60.000 0.00 0.00 38.42 4.00
2869 3159 0.592754 GTCGTAGCGATCTCACCTGC 60.593 60.000 0.00 0.00 38.42 4.85
2870 3160 1.655654 CGTAGCGATCTCACCTGCG 60.656 63.158 0.00 0.00 0.00 5.18
2871 3161 1.299468 GTAGCGATCTCACCTGCGG 60.299 63.158 0.00 0.00 0.00 5.69
2872 3162 3.138930 TAGCGATCTCACCTGCGGC 62.139 63.158 0.00 0.00 0.00 6.53
2874 3164 4.193334 CGATCTCACCTGCGGCGA 62.193 66.667 12.98 0.00 0.00 5.54
2875 3165 2.583593 GATCTCACCTGCGGCGAC 60.584 66.667 12.98 2.02 0.00 5.19
2876 3166 3.069980 GATCTCACCTGCGGCGACT 62.070 63.158 12.98 0.00 0.00 4.18
2877 3167 1.725557 GATCTCACCTGCGGCGACTA 61.726 60.000 12.98 0.00 0.00 2.59
2878 3168 1.320344 ATCTCACCTGCGGCGACTAA 61.320 55.000 12.98 0.00 0.00 2.24
2879 3169 1.080093 CTCACCTGCGGCGACTAAA 60.080 57.895 12.98 0.00 0.00 1.85
2880 3170 1.078759 CTCACCTGCGGCGACTAAAG 61.079 60.000 12.98 0.00 0.00 1.85
2881 3171 2.100631 CACCTGCGGCGACTAAAGG 61.101 63.158 12.98 11.15 0.00 3.11
2882 3172 2.264794 CCTGCGGCGACTAAAGGT 59.735 61.111 12.98 0.00 0.00 3.50
2883 3173 1.375523 CCTGCGGCGACTAAAGGTT 60.376 57.895 12.98 0.00 0.00 3.50
2884 3174 0.953960 CCTGCGGCGACTAAAGGTTT 60.954 55.000 12.98 0.00 0.00 3.27
2885 3175 0.165944 CTGCGGCGACTAAAGGTTTG 59.834 55.000 12.98 0.00 0.00 2.93
2886 3176 0.533308 TGCGGCGACTAAAGGTTTGT 60.533 50.000 12.98 0.00 0.00 2.83
2887 3177 0.589708 GCGGCGACTAAAGGTTTGTT 59.410 50.000 12.98 0.00 0.00 2.83
2888 3178 1.399343 GCGGCGACTAAAGGTTTGTTC 60.399 52.381 12.98 0.00 0.00 3.18
2889 3179 2.140717 CGGCGACTAAAGGTTTGTTCT 58.859 47.619 0.00 0.00 0.00 3.01
2890 3180 2.546789 CGGCGACTAAAGGTTTGTTCTT 59.453 45.455 0.00 0.00 0.00 2.52
2891 3181 3.002965 CGGCGACTAAAGGTTTGTTCTTT 59.997 43.478 0.00 0.00 38.00 2.52
2892 3182 4.287720 GGCGACTAAAGGTTTGTTCTTTG 58.712 43.478 0.00 0.00 36.12 2.77
2893 3183 4.201980 GGCGACTAAAGGTTTGTTCTTTGT 60.202 41.667 0.00 0.00 36.12 2.83
2894 3184 4.968181 GCGACTAAAGGTTTGTTCTTTGTC 59.032 41.667 0.00 0.00 36.12 3.18
2895 3185 5.448089 GCGACTAAAGGTTTGTTCTTTGTCA 60.448 40.000 0.88 0.00 35.08 3.58
2896 3186 6.725246 CGACTAAAGGTTTGTTCTTTGTCAT 58.275 36.000 0.88 0.00 35.08 3.06
2897 3187 6.851330 CGACTAAAGGTTTGTTCTTTGTCATC 59.149 38.462 0.88 0.00 35.08 2.92
2898 3188 6.725246 ACTAAAGGTTTGTTCTTTGTCATCG 58.275 36.000 0.00 0.00 36.12 3.84
2899 3189 4.568152 AAGGTTTGTTCTTTGTCATCGG 57.432 40.909 0.00 0.00 0.00 4.18
2900 3190 3.551846 AGGTTTGTTCTTTGTCATCGGT 58.448 40.909 0.00 0.00 0.00 4.69
2901 3191 3.315191 AGGTTTGTTCTTTGTCATCGGTG 59.685 43.478 0.00 0.00 0.00 4.94
2902 3192 3.066203 GGTTTGTTCTTTGTCATCGGTGT 59.934 43.478 0.00 0.00 0.00 4.16
2903 3193 4.273969 GGTTTGTTCTTTGTCATCGGTGTA 59.726 41.667 0.00 0.00 0.00 2.90
2904 3194 5.048991 GGTTTGTTCTTTGTCATCGGTGTAT 60.049 40.000 0.00 0.00 0.00 2.29
2905 3195 5.856126 TTGTTCTTTGTCATCGGTGTATC 57.144 39.130 0.00 0.00 0.00 2.24
2906 3196 4.250464 TGTTCTTTGTCATCGGTGTATCC 58.750 43.478 0.00 0.00 0.00 2.59
2907 3197 4.250464 GTTCTTTGTCATCGGTGTATCCA 58.750 43.478 0.00 0.00 35.57 3.41
2908 3198 4.545208 TCTTTGTCATCGGTGTATCCAA 57.455 40.909 0.00 0.00 35.57 3.53
2909 3199 4.900684 TCTTTGTCATCGGTGTATCCAAA 58.099 39.130 0.00 1.01 35.57 3.28
2910 3200 5.496556 TCTTTGTCATCGGTGTATCCAAAT 58.503 37.500 0.00 0.00 35.57 2.32
2911 3201 5.943416 TCTTTGTCATCGGTGTATCCAAATT 59.057 36.000 0.00 0.00 35.57 1.82
2912 3202 6.432783 TCTTTGTCATCGGTGTATCCAAATTT 59.567 34.615 0.00 0.00 35.57 1.82
2913 3203 6.582677 TTGTCATCGGTGTATCCAAATTTT 57.417 33.333 0.00 0.00 35.57 1.82
2914 3204 7.689446 TTGTCATCGGTGTATCCAAATTTTA 57.311 32.000 0.00 0.00 35.57 1.52
2915 3205 7.315247 TGTCATCGGTGTATCCAAATTTTAG 57.685 36.000 0.00 0.00 35.57 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.779303 AGAAAACCAACGAAAAACAAAGAAAAT 58.221 25.926 0.00 0.00 0.00 1.82
117 119 8.935844 AGGAGAACAAAAGAAAACAAATGAAAC 58.064 29.630 0.00 0.00 0.00 2.78
152 154 8.442384 GCCAAAATGTTTATAGAACAACAATGG 58.558 33.333 10.52 10.52 37.78 3.16
215 217 9.905713 ACCATGTACTCAGTAAATGTCAATATT 57.094 29.630 13.17 0.00 33.26 1.28
216 218 9.547753 GACCATGTACTCAGTAAATGTCAATAT 57.452 33.333 13.17 0.00 33.26 1.28
217 219 8.536175 TGACCATGTACTCAGTAAATGTCAATA 58.464 33.333 13.17 0.00 33.26 1.90
218 220 7.394016 TGACCATGTACTCAGTAAATGTCAAT 58.606 34.615 13.17 0.00 33.26 2.57
219 221 6.764379 TGACCATGTACTCAGTAAATGTCAA 58.236 36.000 13.17 0.00 33.26 3.18
220 222 6.353404 TGACCATGTACTCAGTAAATGTCA 57.647 37.500 13.17 12.87 33.26 3.58
221 223 6.874134 AGTTGACCATGTACTCAGTAAATGTC 59.126 38.462 13.17 10.89 33.26 3.06
222 224 6.769512 AGTTGACCATGTACTCAGTAAATGT 58.230 36.000 13.17 2.73 33.26 2.71
223 225 7.672983 AAGTTGACCATGTACTCAGTAAATG 57.327 36.000 7.94 7.94 34.49 2.32
224 226 8.691661 AAAAGTTGACCATGTACTCAGTAAAT 57.308 30.769 0.00 0.00 0.00 1.40
225 227 8.514330 AAAAAGTTGACCATGTACTCAGTAAA 57.486 30.769 0.00 0.00 0.00 2.01
692 931 9.906660 TTTTTGACAAGTGTTAAATGCCTATAG 57.093 29.630 2.65 0.00 34.27 1.31
720 959 9.853555 CCATGTATTCACAAAATGCTAAAGTTA 57.146 29.630 0.00 0.00 38.42 2.24
728 967 5.925397 TGTTGACCATGTATTCACAAAATGC 59.075 36.000 0.00 0.00 38.42 3.56
856 1100 3.200825 ACTTATCATAGGCCAGTTGCACT 59.799 43.478 5.01 0.00 43.89 4.40
865 1109 5.476091 AACTCTAGCACTTATCATAGGCC 57.524 43.478 0.00 0.00 0.00 5.19
866 1110 6.422400 GTCAAACTCTAGCACTTATCATAGGC 59.578 42.308 0.00 0.00 0.00 3.93
867 1111 6.638873 CGTCAAACTCTAGCACTTATCATAGG 59.361 42.308 0.00 0.00 0.00 2.57
868 1112 6.638873 CCGTCAAACTCTAGCACTTATCATAG 59.361 42.308 0.00 0.00 0.00 2.23
869 1113 6.461092 CCCGTCAAACTCTAGCACTTATCATA 60.461 42.308 0.00 0.00 0.00 2.15
878 1122 1.295423 GGCCCGTCAAACTCTAGCA 59.705 57.895 0.00 0.00 0.00 3.49
884 1128 1.004200 CTTACCGGCCCGTCAAACT 60.004 57.895 0.00 0.00 0.00 2.66
885 1129 1.004679 TCTTACCGGCCCGTCAAAC 60.005 57.895 0.00 0.00 0.00 2.93
887 1131 1.474332 AAGTCTTACCGGCCCGTCAA 61.474 55.000 0.00 0.00 0.00 3.18
889 1133 0.749049 ATAAGTCTTACCGGCCCGTC 59.251 55.000 0.00 0.00 0.00 4.79
906 1150 6.501805 AGTCTGGCCCATATCATACTGAAATA 59.498 38.462 0.00 0.00 0.00 1.40
915 1159 8.860088 GTTTAAAATAAGTCTGGCCCATATCAT 58.140 33.333 0.00 0.00 0.00 2.45
916 1160 7.012894 CGTTTAAAATAAGTCTGGCCCATATCA 59.987 37.037 0.00 0.00 0.00 2.15
922 1166 4.095932 CCTCGTTTAAAATAAGTCTGGCCC 59.904 45.833 0.00 0.00 0.00 5.80
923 1167 4.095932 CCCTCGTTTAAAATAAGTCTGGCC 59.904 45.833 0.00 0.00 0.00 5.36
925 1169 6.018994 CGATCCCTCGTTTAAAATAAGTCTGG 60.019 42.308 0.00 0.00 40.07 3.86
927 1171 6.047231 CCGATCCCTCGTTTAAAATAAGTCT 58.953 40.000 0.00 0.00 43.49 3.24
929 1173 5.121105 CCCGATCCCTCGTTTAAAATAAGT 58.879 41.667 0.00 0.00 43.49 2.24
931 1175 3.878699 GCCCGATCCCTCGTTTAAAATAA 59.121 43.478 0.00 0.00 43.49 1.40
932 1176 3.135167 AGCCCGATCCCTCGTTTAAAATA 59.865 43.478 0.00 0.00 43.49 1.40
933 1177 2.092592 AGCCCGATCCCTCGTTTAAAAT 60.093 45.455 0.00 0.00 43.49 1.82
934 1178 1.279846 AGCCCGATCCCTCGTTTAAAA 59.720 47.619 0.00 0.00 43.49 1.52
935 1179 0.906775 AGCCCGATCCCTCGTTTAAA 59.093 50.000 0.00 0.00 43.49 1.52
936 1180 0.462789 GAGCCCGATCCCTCGTTTAA 59.537 55.000 0.00 0.00 43.49 1.52
937 1181 0.396695 AGAGCCCGATCCCTCGTTTA 60.397 55.000 0.00 0.00 43.49 2.01
938 1182 1.265454 AAGAGCCCGATCCCTCGTTT 61.265 55.000 0.00 0.00 43.49 3.60
939 1183 1.677637 GAAGAGCCCGATCCCTCGTT 61.678 60.000 0.00 0.00 43.49 3.85
940 1184 2.042843 AAGAGCCCGATCCCTCGT 60.043 61.111 0.00 0.00 43.49 4.18
941 1185 2.731374 GAAGAGCCCGATCCCTCG 59.269 66.667 0.00 0.00 44.62 4.63
942 1186 1.124477 ATGGAAGAGCCCGATCCCTC 61.124 60.000 0.00 0.00 34.97 4.30
943 1187 0.695803 AATGGAAGAGCCCGATCCCT 60.696 55.000 0.00 0.00 34.97 4.20
944 1188 0.250510 GAATGGAAGAGCCCGATCCC 60.251 60.000 0.00 0.00 34.97 3.85
945 1189 0.469917 TGAATGGAAGAGCCCGATCC 59.530 55.000 0.00 0.00 34.97 3.36
950 1194 4.102367 AGACTTATCTGAATGGAAGAGCCC 59.898 45.833 0.00 0.00 32.29 5.19
963 1207 3.328931 ACCATATGGGCCAGACTTATCTG 59.671 47.826 25.55 0.69 45.45 2.90
1150 1394 2.140839 ACCGGACCTACAACTAGGAG 57.859 55.000 9.46 0.00 42.34 3.69
1153 1397 5.240403 GGTTAGATACCGGACCTACAACTAG 59.760 48.000 9.46 0.00 37.12 2.57
1173 1425 1.736645 GCGCGAGAGTTGCAGGTTA 60.737 57.895 12.10 0.00 35.23 2.85
1174 1426 3.044305 GCGCGAGAGTTGCAGGTT 61.044 61.111 12.10 0.00 35.23 3.50
1187 1439 1.008995 CAAATTAATCCCCCGCGCG 60.009 57.895 25.67 25.67 0.00 6.86
1238 1492 5.048852 TGCGTCTCAAATGAACAATCAATCA 60.049 36.000 0.00 0.00 39.49 2.57
1240 1494 5.375417 TGCGTCTCAAATGAACAATCAAT 57.625 34.783 0.00 0.00 39.49 2.57
1273 1527 5.353400 CAGTCTCATTTCCATGCGCATATAT 59.647 40.000 24.84 10.91 0.00 0.86
1275 1529 3.501062 CAGTCTCATTTCCATGCGCATAT 59.499 43.478 24.84 10.33 0.00 1.78
1277 1531 1.674441 CAGTCTCATTTCCATGCGCAT 59.326 47.619 19.28 19.28 0.00 4.73
1297 1551 5.701290 CACCGTCCCTTCATATATTTTCCTC 59.299 44.000 0.00 0.00 0.00 3.71
1298 1552 5.132144 ACACCGTCCCTTCATATATTTTCCT 59.868 40.000 0.00 0.00 0.00 3.36
1306 1560 4.040461 CCTTATCACACCGTCCCTTCATAT 59.960 45.833 0.00 0.00 0.00 1.78
1307 1561 3.386726 CCTTATCACACCGTCCCTTCATA 59.613 47.826 0.00 0.00 0.00 2.15
1321 1575 6.321435 CACCCCTTCCTAAAATTCCTTATCAC 59.679 42.308 0.00 0.00 0.00 3.06
1323 1577 6.321435 CACACCCCTTCCTAAAATTCCTTATC 59.679 42.308 0.00 0.00 0.00 1.75
1326 1580 4.416516 CACACCCCTTCCTAAAATTCCTT 58.583 43.478 0.00 0.00 0.00 3.36
1327 1581 3.817931 GCACACCCCTTCCTAAAATTCCT 60.818 47.826 0.00 0.00 0.00 3.36
1328 1582 2.496070 GCACACCCCTTCCTAAAATTCC 59.504 50.000 0.00 0.00 0.00 3.01
1329 1583 3.431415 AGCACACCCCTTCCTAAAATTC 58.569 45.455 0.00 0.00 0.00 2.17
1330 1584 3.542969 AGCACACCCCTTCCTAAAATT 57.457 42.857 0.00 0.00 0.00 1.82
1331 1585 3.591977 ACTAGCACACCCCTTCCTAAAAT 59.408 43.478 0.00 0.00 0.00 1.82
1340 1594 0.620556 CCATGAACTAGCACACCCCT 59.379 55.000 0.00 0.00 0.00 4.79
1396 1650 1.286880 CAAGAAACGGGCCAAGCTG 59.713 57.895 4.39 0.00 0.00 4.24
1398 1652 0.597377 CAACAAGAAACGGGCCAAGC 60.597 55.000 4.39 0.00 0.00 4.01
1420 1674 6.899393 TTAACCTTGCACAGAAATTCAGAT 57.101 33.333 0.00 0.00 0.00 2.90
1429 1683 6.321181 AGAAAGAACAATTAACCTTGCACAGA 59.679 34.615 0.00 0.00 0.00 3.41
1513 1792 5.251764 ACTCAAAGAACAGATTCATGGGAG 58.748 41.667 0.00 0.00 37.29 4.30
1553 1832 0.302890 CTCATGGAATTCGTGCGCTC 59.697 55.000 9.73 3.51 32.54 5.03
1576 1855 0.736053 CCACTAGAGACCTCGCACTC 59.264 60.000 0.00 0.00 34.09 3.51
1579 1858 1.544691 GTTTCCACTAGAGACCTCGCA 59.455 52.381 0.00 0.00 34.09 5.10
1636 1915 3.769844 TGAGGGTGGATCTTGACTTACTC 59.230 47.826 0.00 0.00 0.00 2.59
1641 1920 4.338879 CAAATTGAGGGTGGATCTTGACT 58.661 43.478 0.00 0.00 0.00 3.41
1692 1971 1.439679 GGTGAAGAAGTAAGGCACCG 58.560 55.000 0.00 0.00 39.53 4.94
1695 1974 3.391296 ACAGAAGGTGAAGAAGTAAGGCA 59.609 43.478 0.00 0.00 0.00 4.75
1756 2035 2.246067 AGTAGGGCTGATCTCCTTCTCA 59.754 50.000 7.85 0.00 34.75 3.27
1831 2110 4.344865 GGTGGCAAAGGAGGCGGA 62.345 66.667 0.00 0.00 36.77 5.54
1954 2233 0.865769 CACTACGCTGCGGAAAAACT 59.134 50.000 26.95 5.61 0.00 2.66
1966 2245 9.341899 AGAATTTTGAATTTTATGTCACTACGC 57.658 29.630 0.00 0.00 0.00 4.42
1986 2276 1.348696 CAAGCCCCCTGCAAAGAATTT 59.651 47.619 0.00 0.00 44.83 1.82
1993 2283 2.918802 CAAGCAAGCCCCCTGCAA 60.919 61.111 0.00 0.00 44.83 4.08
2046 2336 7.440556 GTCTACAACCTCTGACTATATACACGA 59.559 40.741 0.00 0.00 0.00 4.35
2142 2432 8.026607 ACTTCGAAATTTGTTCAGTCTGAAAAA 58.973 29.630 16.86 14.98 38.22 1.94
2218 2508 0.925267 CACGTTTGCTGCAACTCGTG 60.925 55.000 34.44 34.44 41.34 4.35
2221 2511 3.907893 GCACGTTTGCTGCAACTC 58.092 55.556 15.72 10.28 46.17 3.01
2282 2572 6.214399 CGTTGTAAGTATAGCTTTCTAGGGG 58.786 44.000 0.00 0.00 38.57 4.79
2283 2573 6.040166 TCCGTTGTAAGTATAGCTTTCTAGGG 59.960 42.308 0.00 0.00 36.97 3.53
2297 2587 9.551734 AACTAGAAATTTTACTCCGTTGTAAGT 57.448 29.630 0.00 0.00 34.43 2.24
2317 2607 3.515104 CCGGTTTAGTGGGGTAAACTAGA 59.485 47.826 0.00 0.00 41.03 2.43
2346 2636 7.037586 ACTCCCTTATCAGATTTGGTACTTCAA 60.038 37.037 0.00 0.00 0.00 2.69
2380 2670 3.950397 TCTCACATAAGCGGGAACAAAT 58.050 40.909 0.00 0.00 0.00 2.32
2382 2672 3.055458 TGATCTCACATAAGCGGGAACAA 60.055 43.478 0.00 0.00 0.00 2.83
2383 2673 2.499693 TGATCTCACATAAGCGGGAACA 59.500 45.455 0.00 0.00 0.00 3.18
2384 2674 3.126831 CTGATCTCACATAAGCGGGAAC 58.873 50.000 0.00 0.00 0.00 3.62
2385 2675 2.483714 GCTGATCTCACATAAGCGGGAA 60.484 50.000 0.00 0.00 0.00 3.97
2386 2676 1.069204 GCTGATCTCACATAAGCGGGA 59.931 52.381 0.00 0.00 0.00 5.14
2387 2677 1.069823 AGCTGATCTCACATAAGCGGG 59.930 52.381 0.00 0.00 38.90 6.13
2392 2682 7.609097 AGGATCTTTAGCTGATCTCACATAA 57.391 36.000 11.18 0.00 39.95 1.90
2393 2683 7.225784 GAGGATCTTTAGCTGATCTCACATA 57.774 40.000 11.18 0.00 39.95 2.29
2394 2684 6.100404 GAGGATCTTTAGCTGATCTCACAT 57.900 41.667 11.18 0.00 39.95 3.21
2395 2685 5.528043 GAGGATCTTTAGCTGATCTCACA 57.472 43.478 11.18 0.00 39.95 3.58
2410 2700 7.234577 GAGGAAATACATCACCTTAGAGGATCT 59.765 40.741 0.07 0.00 40.19 2.75
2411 2701 7.234577 AGAGGAAATACATCACCTTAGAGGATC 59.765 40.741 0.07 0.00 37.67 3.36
2412 2702 7.079048 AGAGGAAATACATCACCTTAGAGGAT 58.921 38.462 0.07 0.00 37.67 3.24
2413 2703 6.444704 AGAGGAAATACATCACCTTAGAGGA 58.555 40.000 0.07 0.00 37.67 3.71
2414 2704 6.239458 GGAGAGGAAATACATCACCTTAGAGG 60.239 46.154 0.00 0.00 42.49 3.69
2415 2705 6.239458 GGGAGAGGAAATACATCACCTTAGAG 60.239 46.154 0.00 0.00 39.34 2.43
2416 2706 5.602978 GGGAGAGGAAATACATCACCTTAGA 59.397 44.000 0.00 0.00 39.34 2.10
2417 2707 5.509840 CGGGAGAGGAAATACATCACCTTAG 60.510 48.000 0.00 0.00 39.34 2.18
2418 2708 4.344102 CGGGAGAGGAAATACATCACCTTA 59.656 45.833 0.00 0.00 39.34 2.69
2419 2709 3.134804 CGGGAGAGGAAATACATCACCTT 59.865 47.826 0.00 0.00 39.34 3.50
2420 2710 2.700897 CGGGAGAGGAAATACATCACCT 59.299 50.000 0.00 0.00 39.34 4.00
2421 2711 2.807108 GCGGGAGAGGAAATACATCACC 60.807 54.545 0.00 0.00 38.83 4.02
2422 2712 2.103263 AGCGGGAGAGGAAATACATCAC 59.897 50.000 0.00 0.00 0.00 3.06
2423 2713 2.398588 AGCGGGAGAGGAAATACATCA 58.601 47.619 0.00 0.00 0.00 3.07
2424 2714 3.181465 TGAAGCGGGAGAGGAAATACATC 60.181 47.826 0.00 0.00 0.00 3.06
2425 2715 2.771943 TGAAGCGGGAGAGGAAATACAT 59.228 45.455 0.00 0.00 0.00 2.29
2426 2716 2.184533 TGAAGCGGGAGAGGAAATACA 58.815 47.619 0.00 0.00 0.00 2.29
2427 2717 2.981859 TGAAGCGGGAGAGGAAATAC 57.018 50.000 0.00 0.00 0.00 1.89
2428 2718 3.808728 CAATGAAGCGGGAGAGGAAATA 58.191 45.455 0.00 0.00 0.00 1.40
2429 2719 2.648059 CAATGAAGCGGGAGAGGAAAT 58.352 47.619 0.00 0.00 0.00 2.17
2430 2720 1.950484 GCAATGAAGCGGGAGAGGAAA 60.950 52.381 0.00 0.00 0.00 3.13
2431 2721 0.392998 GCAATGAAGCGGGAGAGGAA 60.393 55.000 0.00 0.00 0.00 3.36
2432 2722 1.221840 GCAATGAAGCGGGAGAGGA 59.778 57.895 0.00 0.00 0.00 3.71
2433 2723 1.821332 GGCAATGAAGCGGGAGAGG 60.821 63.158 0.00 0.00 34.64 3.69
2434 2724 0.813210 GAGGCAATGAAGCGGGAGAG 60.813 60.000 0.00 0.00 34.64 3.20
2435 2725 1.221840 GAGGCAATGAAGCGGGAGA 59.778 57.895 0.00 0.00 34.64 3.71
2436 2726 0.677731 TTGAGGCAATGAAGCGGGAG 60.678 55.000 0.00 0.00 34.64 4.30
2437 2727 0.251121 TTTGAGGCAATGAAGCGGGA 60.251 50.000 0.00 0.00 34.64 5.14
2438 2728 0.602562 TTTTGAGGCAATGAAGCGGG 59.397 50.000 0.00 0.00 34.64 6.13
2439 2729 2.264813 CATTTTGAGGCAATGAAGCGG 58.735 47.619 0.00 0.00 34.05 5.52
2440 2730 2.264813 CCATTTTGAGGCAATGAAGCG 58.735 47.619 0.00 0.00 34.05 4.68
2471 2761 1.965643 GGAAAAAGGGGTGTACCAACC 59.034 52.381 3.11 0.00 41.21 3.77
2472 2762 2.668625 TGGAAAAAGGGGTGTACCAAC 58.331 47.619 3.11 0.00 42.91 3.77
2473 2763 3.117093 TGATGGAAAAAGGGGTGTACCAA 60.117 43.478 3.11 0.00 42.91 3.67
2474 2764 2.447429 TGATGGAAAAAGGGGTGTACCA 59.553 45.455 3.11 0.00 42.91 3.25
2475 2765 3.163616 TGATGGAAAAAGGGGTGTACC 57.836 47.619 0.00 0.00 39.11 3.34
2476 2766 5.538849 TTTTGATGGAAAAAGGGGTGTAC 57.461 39.130 0.00 0.00 30.25 2.90
2477 2767 5.012561 CCATTTTGATGGAAAAAGGGGTGTA 59.987 40.000 5.43 0.00 43.78 2.90
2478 2768 4.202451 CCATTTTGATGGAAAAAGGGGTGT 60.202 41.667 5.43 0.00 43.78 4.16
2479 2769 4.325972 CCATTTTGATGGAAAAAGGGGTG 58.674 43.478 5.43 0.00 43.78 4.61
2480 2770 3.244875 GCCATTTTGATGGAAAAAGGGGT 60.245 43.478 13.17 0.00 46.24 4.95
2481 2771 3.009363 AGCCATTTTGATGGAAAAAGGGG 59.991 43.478 13.17 6.81 46.24 4.79
2483 2773 4.897140 TGAGCCATTTTGATGGAAAAAGG 58.103 39.130 9.52 0.00 44.39 3.11
2484 2774 4.390909 GCTGAGCCATTTTGATGGAAAAAG 59.609 41.667 9.52 2.55 44.39 2.27
2485 2775 4.317488 GCTGAGCCATTTTGATGGAAAAA 58.683 39.130 9.52 0.00 44.39 1.94
2486 2776 3.929094 GCTGAGCCATTTTGATGGAAAA 58.071 40.909 9.52 0.00 44.39 2.29
2487 2777 3.598019 GCTGAGCCATTTTGATGGAAA 57.402 42.857 9.52 0.00 44.39 3.13
2512 2802 0.109153 ACGGAAAGGGTGTACCAACC 59.891 55.000 3.11 0.00 42.50 3.77
2513 2803 1.971481 AACGGAAAGGGTGTACCAAC 58.029 50.000 3.11 0.00 43.89 3.77
2514 2804 2.092538 TGAAACGGAAAGGGTGTACCAA 60.093 45.455 3.11 0.00 43.89 3.67
2515 2805 1.489649 TGAAACGGAAAGGGTGTACCA 59.510 47.619 3.11 0.00 43.89 3.25
2516 2806 1.875514 GTGAAACGGAAAGGGTGTACC 59.124 52.381 0.00 0.00 40.67 3.34
2530 2820 1.966451 CCCTGGCACTCCGTGAAAC 60.966 63.158 0.00 0.00 35.23 2.78
2531 2821 1.990160 AACCCTGGCACTCCGTGAAA 61.990 55.000 0.00 0.00 35.23 2.69
2532 2822 1.122632 TAACCCTGGCACTCCGTGAA 61.123 55.000 0.00 0.00 35.23 3.18
2533 2823 0.907704 ATAACCCTGGCACTCCGTGA 60.908 55.000 0.00 0.00 35.23 4.35
2534 2824 0.462047 GATAACCCTGGCACTCCGTG 60.462 60.000 0.00 0.00 36.51 4.94
2535 2825 0.617820 AGATAACCCTGGCACTCCGT 60.618 55.000 0.00 0.00 34.14 4.69
2536 2826 0.541863 AAGATAACCCTGGCACTCCG 59.458 55.000 0.00 0.00 34.14 4.63
2537 2827 2.369394 CAAAGATAACCCTGGCACTCC 58.631 52.381 0.00 0.00 0.00 3.85
2538 2828 1.745653 GCAAAGATAACCCTGGCACTC 59.254 52.381 0.00 0.00 0.00 3.51
2539 2829 1.839424 GCAAAGATAACCCTGGCACT 58.161 50.000 0.00 0.00 0.00 4.40
2540 2830 0.451783 CGCAAAGATAACCCTGGCAC 59.548 55.000 0.00 0.00 0.00 5.01
2541 2831 0.679640 CCGCAAAGATAACCCTGGCA 60.680 55.000 0.00 0.00 0.00 4.92
2542 2832 2.004808 GCCGCAAAGATAACCCTGGC 62.005 60.000 0.00 0.00 0.00 4.85
2543 2833 1.384222 GGCCGCAAAGATAACCCTGG 61.384 60.000 0.00 0.00 0.00 4.45
2544 2834 0.394352 AGGCCGCAAAGATAACCCTG 60.394 55.000 0.00 0.00 0.00 4.45
2545 2835 0.394352 CAGGCCGCAAAGATAACCCT 60.394 55.000 0.00 0.00 0.00 4.34
2546 2836 2.004808 GCAGGCCGCAAAGATAACCC 62.005 60.000 13.61 0.00 41.79 4.11
2547 2837 1.433471 GCAGGCCGCAAAGATAACC 59.567 57.895 13.61 0.00 41.79 2.85
2558 2848 4.147449 TGATCTCCGTGCAGGCCG 62.147 66.667 0.00 0.00 40.77 6.13
2559 2849 2.512515 GTGATCTCCGTGCAGGCC 60.513 66.667 0.00 0.00 40.77 5.19
2560 2850 2.887568 CGTGATCTCCGTGCAGGC 60.888 66.667 0.00 0.00 40.77 4.85
2561 2851 2.842394 AAGCGTGATCTCCGTGCAGG 62.842 60.000 0.00 0.00 42.97 4.85
2562 2852 1.446792 AAGCGTGATCTCCGTGCAG 60.447 57.895 0.00 0.00 0.00 4.41
2563 2853 1.737735 CAAGCGTGATCTCCGTGCA 60.738 57.895 0.00 0.00 0.00 4.57
2564 2854 2.456119 CCAAGCGTGATCTCCGTGC 61.456 63.158 0.00 0.00 0.00 5.34
2565 2855 1.079819 ACCAAGCGTGATCTCCGTG 60.080 57.895 0.00 1.37 0.00 4.94
2566 2856 1.079819 CACCAAGCGTGATCTCCGT 60.080 57.895 0.00 0.00 46.20 4.69
2567 2857 1.215382 TCACCAAGCGTGATCTCCG 59.785 57.895 0.00 0.00 46.80 4.63
2574 2864 3.443045 GGCCCATCACCAAGCGTG 61.443 66.667 0.00 0.00 44.50 5.34
2575 2865 3.286694 ATGGCCCATCACCAAGCGT 62.287 57.895 0.00 0.00 41.49 5.07
2576 2866 2.440796 ATGGCCCATCACCAAGCG 60.441 61.111 0.00 0.00 41.49 4.68
2577 2867 2.428925 CCATGGCCCATCACCAAGC 61.429 63.158 0.00 0.00 41.49 4.01
2578 2868 2.428925 GCCATGGCCCATCACCAAG 61.429 63.158 27.24 0.00 41.49 3.61
2579 2869 1.579140 TAGCCATGGCCCATCACCAA 61.579 55.000 33.14 4.77 41.49 3.67
2580 2870 1.579140 TTAGCCATGGCCCATCACCA 61.579 55.000 33.14 5.41 43.17 4.17
2581 2871 0.825010 CTTAGCCATGGCCCATCACC 60.825 60.000 33.14 3.07 43.17 4.02
2582 2872 0.106519 ACTTAGCCATGGCCCATCAC 60.107 55.000 33.14 3.90 43.17 3.06
2583 2873 0.630673 AACTTAGCCATGGCCCATCA 59.369 50.000 33.14 11.63 43.17 3.07
2584 2874 1.780503 AAACTTAGCCATGGCCCATC 58.219 50.000 33.14 5.56 43.17 3.51
2585 2875 1.832998 CAAAACTTAGCCATGGCCCAT 59.167 47.619 33.14 17.69 43.17 4.00
2586 2876 1.265236 CAAAACTTAGCCATGGCCCA 58.735 50.000 33.14 18.86 43.17 5.36
2587 2877 0.536724 CCAAAACTTAGCCATGGCCC 59.463 55.000 33.14 7.24 43.17 5.80
2590 2880 0.887933 ACGCCAAAACTTAGCCATGG 59.112 50.000 7.63 7.63 0.00 3.66
2591 2881 2.228822 AGAACGCCAAAACTTAGCCATG 59.771 45.455 0.00 0.00 0.00 3.66
2592 2882 2.514803 AGAACGCCAAAACTTAGCCAT 58.485 42.857 0.00 0.00 0.00 4.40
2593 2883 1.975660 AGAACGCCAAAACTTAGCCA 58.024 45.000 0.00 0.00 0.00 4.75
2594 2884 3.332034 TCTAGAACGCCAAAACTTAGCC 58.668 45.455 0.00 0.00 0.00 3.93
2595 2885 6.657836 TTATCTAGAACGCCAAAACTTAGC 57.342 37.500 0.00 0.00 0.00 3.09
2602 2892 9.204570 GCTCTAATTATTATCTAGAACGCCAAA 57.795 33.333 0.00 0.00 0.00 3.28
2603 2893 8.364894 TGCTCTAATTATTATCTAGAACGCCAA 58.635 33.333 0.00 0.00 0.00 4.52
2604 2894 7.892609 TGCTCTAATTATTATCTAGAACGCCA 58.107 34.615 0.00 0.00 0.00 5.69
2605 2895 8.934507 ATGCTCTAATTATTATCTAGAACGCC 57.065 34.615 0.00 0.00 0.00 5.68
2606 2896 9.574458 TGATGCTCTAATTATTATCTAGAACGC 57.426 33.333 0.00 0.00 0.00 4.84
2615 2905 9.624373 CCCAGCTATTGATGCTCTAATTATTAT 57.376 33.333 0.00 0.00 38.92 1.28
2616 2906 7.554118 GCCCAGCTATTGATGCTCTAATTATTA 59.446 37.037 0.00 0.00 38.92 0.98
2617 2907 6.376581 GCCCAGCTATTGATGCTCTAATTATT 59.623 38.462 0.00 0.00 38.92 1.40
2618 2908 5.884792 GCCCAGCTATTGATGCTCTAATTAT 59.115 40.000 0.00 0.00 38.92 1.28
2619 2909 5.221904 TGCCCAGCTATTGATGCTCTAATTA 60.222 40.000 0.00 0.00 38.92 1.40
2620 2910 4.077822 GCCCAGCTATTGATGCTCTAATT 58.922 43.478 0.00 0.00 38.92 1.40
2621 2911 3.073503 TGCCCAGCTATTGATGCTCTAAT 59.926 43.478 0.00 0.00 38.92 1.73
2622 2912 2.439135 TGCCCAGCTATTGATGCTCTAA 59.561 45.455 0.00 0.00 38.92 2.10
2623 2913 2.049372 TGCCCAGCTATTGATGCTCTA 58.951 47.619 0.00 0.00 38.92 2.43
2624 2914 0.841961 TGCCCAGCTATTGATGCTCT 59.158 50.000 0.00 0.00 38.92 4.09
2625 2915 0.950116 GTGCCCAGCTATTGATGCTC 59.050 55.000 0.00 0.00 38.92 4.26
2626 2916 0.466922 GGTGCCCAGCTATTGATGCT 60.467 55.000 0.00 0.00 42.06 3.79
2627 2917 1.458639 GGGTGCCCAGCTATTGATGC 61.459 60.000 1.66 0.00 35.81 3.91
2628 2918 0.184451 AGGGTGCCCAGCTATTGATG 59.816 55.000 10.26 0.00 38.92 3.07
2629 2919 1.819753 TAGGGTGCCCAGCTATTGAT 58.180 50.000 10.26 0.00 38.92 2.57
2630 2920 1.590591 TTAGGGTGCCCAGCTATTGA 58.409 50.000 10.26 0.00 38.92 2.57
2631 2921 2.435372 TTTAGGGTGCCCAGCTATTG 57.565 50.000 10.26 0.00 38.92 1.90
2632 2922 2.785857 AGATTTAGGGTGCCCAGCTATT 59.214 45.455 10.26 0.00 38.92 1.73
2633 2923 2.107204 CAGATTTAGGGTGCCCAGCTAT 59.893 50.000 10.26 0.00 38.92 2.97
2634 2924 1.490490 CAGATTTAGGGTGCCCAGCTA 59.510 52.381 10.26 0.00 38.92 3.32
2635 2925 0.257039 CAGATTTAGGGTGCCCAGCT 59.743 55.000 10.26 0.00 38.92 4.24
2636 2926 0.034089 ACAGATTTAGGGTGCCCAGC 60.034 55.000 10.26 0.00 38.92 4.85
2637 2927 1.561542 AGACAGATTTAGGGTGCCCAG 59.438 52.381 10.26 0.00 38.92 4.45
2638 2928 1.668826 AGACAGATTTAGGGTGCCCA 58.331 50.000 10.26 0.00 38.92 5.36
2639 2929 2.808906 AAGACAGATTTAGGGTGCCC 57.191 50.000 0.00 0.00 0.00 5.36
2640 2930 4.094442 CGTTTAAGACAGATTTAGGGTGCC 59.906 45.833 0.00 0.00 0.00 5.01
2641 2931 4.694037 ACGTTTAAGACAGATTTAGGGTGC 59.306 41.667 0.00 0.00 0.00 5.01
2642 2932 5.350640 GGACGTTTAAGACAGATTTAGGGTG 59.649 44.000 0.00 0.00 0.00 4.61
2643 2933 5.012354 TGGACGTTTAAGACAGATTTAGGGT 59.988 40.000 0.00 0.00 0.00 4.34
2644 2934 5.484715 TGGACGTTTAAGACAGATTTAGGG 58.515 41.667 0.00 0.00 0.00 3.53
2645 2935 5.063564 GCTGGACGTTTAAGACAGATTTAGG 59.936 44.000 0.00 0.00 0.00 2.69
2646 2936 5.220228 CGCTGGACGTTTAAGACAGATTTAG 60.220 44.000 0.00 0.00 36.87 1.85
2647 2937 4.624024 CGCTGGACGTTTAAGACAGATTTA 59.376 41.667 0.00 0.00 36.87 1.40
2648 2938 3.432252 CGCTGGACGTTTAAGACAGATTT 59.568 43.478 0.00 0.00 36.87 2.17
2649 2939 2.993899 CGCTGGACGTTTAAGACAGATT 59.006 45.455 0.00 0.00 36.87 2.40
2650 2940 2.607187 CGCTGGACGTTTAAGACAGAT 58.393 47.619 0.00 0.00 36.87 2.90
2651 2941 1.336517 CCGCTGGACGTTTAAGACAGA 60.337 52.381 0.00 0.00 41.42 3.41
2652 2942 1.068474 CCGCTGGACGTTTAAGACAG 58.932 55.000 0.00 0.00 41.42 3.51
2653 2943 0.947180 GCCGCTGGACGTTTAAGACA 60.947 55.000 0.00 0.00 41.42 3.41
2654 2944 1.632948 GGCCGCTGGACGTTTAAGAC 61.633 60.000 0.00 0.00 41.42 3.01
2655 2945 1.375013 GGCCGCTGGACGTTTAAGA 60.375 57.895 0.00 0.00 41.42 2.10
2656 2946 1.375523 AGGCCGCTGGACGTTTAAG 60.376 57.895 0.00 0.00 41.42 1.85
2657 2947 1.669760 CAGGCCGCTGGACGTTTAA 60.670 57.895 0.00 0.00 41.42 1.52
2658 2948 2.047655 CAGGCCGCTGGACGTTTA 60.048 61.111 0.00 0.00 41.42 2.01
2680 2970 1.504359 TTGTTTGATCGGTCGGTGAC 58.496 50.000 0.00 0.00 0.00 3.67
2681 2971 2.242047 TTTGTTTGATCGGTCGGTGA 57.758 45.000 0.00 0.00 0.00 4.02
2682 2972 3.552604 ATTTTGTTTGATCGGTCGGTG 57.447 42.857 0.00 0.00 0.00 4.94
2683 2973 3.566322 TCAATTTTGTTTGATCGGTCGGT 59.434 39.130 0.00 0.00 30.82 4.69
2684 2974 3.911964 GTCAATTTTGTTTGATCGGTCGG 59.088 43.478 0.00 0.00 37.88 4.79
2685 2975 4.783242 AGTCAATTTTGTTTGATCGGTCG 58.217 39.130 0.00 0.00 37.88 4.79
2686 2976 5.757886 TGAGTCAATTTTGTTTGATCGGTC 58.242 37.500 0.00 0.00 37.88 4.79
2687 2977 5.530915 TCTGAGTCAATTTTGTTTGATCGGT 59.469 36.000 0.00 0.00 37.88 4.69
2688 2978 6.000891 TCTGAGTCAATTTTGTTTGATCGG 57.999 37.500 0.00 0.00 37.88 4.18
2689 2979 6.525628 CCATCTGAGTCAATTTTGTTTGATCG 59.474 38.462 0.00 0.00 37.88 3.69
2690 2980 6.810182 CCCATCTGAGTCAATTTTGTTTGATC 59.190 38.462 0.00 0.00 37.88 2.92
2691 2981 6.694447 CCCATCTGAGTCAATTTTGTTTGAT 58.306 36.000 0.00 0.00 37.88 2.57
2692 2982 5.509501 GCCCATCTGAGTCAATTTTGTTTGA 60.510 40.000 0.00 0.00 33.32 2.69
2693 2983 4.687483 GCCCATCTGAGTCAATTTTGTTTG 59.313 41.667 0.00 0.00 0.00 2.93
2694 2984 4.559300 CGCCCATCTGAGTCAATTTTGTTT 60.559 41.667 0.00 0.00 0.00 2.83
2695 2985 3.057315 CGCCCATCTGAGTCAATTTTGTT 60.057 43.478 0.00 0.00 0.00 2.83
2696 2986 2.489329 CGCCCATCTGAGTCAATTTTGT 59.511 45.455 0.00 0.00 0.00 2.83
2697 2987 2.489329 ACGCCCATCTGAGTCAATTTTG 59.511 45.455 0.00 0.00 0.00 2.44
2698 2988 2.749621 GACGCCCATCTGAGTCAATTTT 59.250 45.455 0.00 0.00 34.09 1.82
2699 2989 2.026822 AGACGCCCATCTGAGTCAATTT 60.027 45.455 0.00 0.00 36.18 1.82
2700 2990 1.556911 AGACGCCCATCTGAGTCAATT 59.443 47.619 0.00 0.00 36.18 2.32
2701 2991 1.198713 AGACGCCCATCTGAGTCAAT 58.801 50.000 0.00 0.00 36.18 2.57
2702 2992 0.976641 AAGACGCCCATCTGAGTCAA 59.023 50.000 0.00 0.00 36.18 3.18
2703 2993 1.847328 TAAGACGCCCATCTGAGTCA 58.153 50.000 0.00 0.00 36.18 3.41
2704 2994 2.930682 GTTTAAGACGCCCATCTGAGTC 59.069 50.000 0.00 0.00 0.00 3.36
2705 2995 2.674177 CGTTTAAGACGCCCATCTGAGT 60.674 50.000 0.00 0.00 45.86 3.41
2706 2996 1.927174 CGTTTAAGACGCCCATCTGAG 59.073 52.381 0.00 0.00 45.86 3.35
2707 2997 2.004583 CGTTTAAGACGCCCATCTGA 57.995 50.000 0.00 0.00 45.86 3.27
2717 3007 3.420839 CATTGGATGCCCGTTTAAGAC 57.579 47.619 0.00 0.00 34.29 3.01
2729 3019 1.153107 TCAGCTCGGGCATTGGATG 60.153 57.895 11.40 0.00 41.70 3.51
2730 3020 1.153086 GTCAGCTCGGGCATTGGAT 60.153 57.895 11.40 0.00 41.70 3.41
2731 3021 2.268920 GTCAGCTCGGGCATTGGA 59.731 61.111 11.40 0.00 41.70 3.53
2732 3022 2.825836 GGTCAGCTCGGGCATTGG 60.826 66.667 11.40 0.00 41.70 3.16
2733 3023 3.197790 CGGTCAGCTCGGGCATTG 61.198 66.667 11.40 0.00 41.70 2.82
2734 3024 4.473520 CCGGTCAGCTCGGGCATT 62.474 66.667 11.40 0.00 43.45 3.56
2741 3031 3.112709 GACGTTGCCGGTCAGCTC 61.113 66.667 1.90 0.69 38.78 4.09
2742 3032 1.884075 TATGACGTTGCCGGTCAGCT 61.884 55.000 1.90 0.00 38.78 4.24
2743 3033 0.810031 ATATGACGTTGCCGGTCAGC 60.810 55.000 1.90 2.78 38.78 4.26
2744 3034 1.209128 GATATGACGTTGCCGGTCAG 58.791 55.000 1.90 0.00 38.78 3.51
2745 3035 0.179094 GGATATGACGTTGCCGGTCA 60.179 55.000 1.90 0.00 38.78 4.02
2746 3036 0.179094 TGGATATGACGTTGCCGGTC 60.179 55.000 1.90 0.00 38.78 4.79
2747 3037 0.179084 CTGGATATGACGTTGCCGGT 60.179 55.000 1.90 0.00 38.78 5.28
2748 3038 1.498865 GCTGGATATGACGTTGCCGG 61.499 60.000 0.00 0.00 38.78 6.13
2749 3039 1.498865 GGCTGGATATGACGTTGCCG 61.499 60.000 0.00 0.00 40.83 5.69
2750 3040 1.166531 GGGCTGGATATGACGTTGCC 61.167 60.000 0.00 0.00 38.28 4.52
2751 3041 0.463654 TGGGCTGGATATGACGTTGC 60.464 55.000 0.00 0.00 0.00 4.17
2752 3042 2.036958 TTGGGCTGGATATGACGTTG 57.963 50.000 0.00 0.00 0.00 4.10
2753 3043 2.799126 TTTGGGCTGGATATGACGTT 57.201 45.000 0.00 0.00 0.00 3.99
2754 3044 2.799126 TTTTGGGCTGGATATGACGT 57.201 45.000 0.00 0.00 0.00 4.34
2755 3045 3.381272 ACATTTTTGGGCTGGATATGACG 59.619 43.478 0.00 0.00 0.00 4.35
2756 3046 4.685924 CACATTTTTGGGCTGGATATGAC 58.314 43.478 0.00 0.00 0.00 3.06
2757 3047 3.132646 GCACATTTTTGGGCTGGATATGA 59.867 43.478 0.00 0.00 34.89 2.15
2758 3048 3.460103 GCACATTTTTGGGCTGGATATG 58.540 45.455 0.00 0.00 34.89 1.78
2759 3049 2.435437 GGCACATTTTTGGGCTGGATAT 59.565 45.455 0.00 0.00 38.48 1.63
2760 3050 1.830477 GGCACATTTTTGGGCTGGATA 59.170 47.619 0.00 0.00 38.48 2.59
2761 3051 0.614812 GGCACATTTTTGGGCTGGAT 59.385 50.000 0.00 0.00 38.48 3.41
2762 3052 0.762082 TGGCACATTTTTGGGCTGGA 60.762 50.000 0.00 0.00 38.48 3.86
2763 3053 0.320946 CTGGCACATTTTTGGGCTGG 60.321 55.000 0.00 0.00 38.20 4.85
2764 3054 0.680618 TCTGGCACATTTTTGGGCTG 59.319 50.000 0.00 0.00 38.20 4.85
2765 3055 1.648116 ATCTGGCACATTTTTGGGCT 58.352 45.000 0.00 0.00 38.20 5.19
2766 3056 3.460103 CATATCTGGCACATTTTTGGGC 58.540 45.455 0.00 0.00 38.20 5.36
2767 3057 3.181463 CCCATATCTGGCACATTTTTGGG 60.181 47.826 4.52 4.52 41.64 4.12
2768 3058 3.181463 CCCCATATCTGGCACATTTTTGG 60.181 47.826 0.00 0.00 41.64 3.28
2769 3059 3.181463 CCCCCATATCTGGCACATTTTTG 60.181 47.826 0.00 0.00 41.64 2.44
2770 3060 3.040477 CCCCCATATCTGGCACATTTTT 58.960 45.455 0.00 0.00 41.64 1.94
2771 3061 2.681422 CCCCCATATCTGGCACATTTT 58.319 47.619 0.00 0.00 41.64 1.82
2772 3062 1.758841 GCCCCCATATCTGGCACATTT 60.759 52.381 0.00 0.00 44.70 2.32
2773 3063 0.178953 GCCCCCATATCTGGCACATT 60.179 55.000 0.00 0.00 44.70 2.71
2774 3064 1.462035 GCCCCCATATCTGGCACAT 59.538 57.895 0.00 0.00 44.70 3.21
2775 3065 2.926250 GCCCCCATATCTGGCACA 59.074 61.111 0.00 0.00 44.70 4.57
2776 3066 2.281761 CGCCCCCATATCTGGCAC 60.282 66.667 7.29 0.00 45.63 5.01
2777 3067 4.269523 GCGCCCCCATATCTGGCA 62.270 66.667 0.00 0.00 45.63 4.92
2788 3078 2.047370 CACATTTTTGGGCGCCCC 60.047 61.111 41.75 24.44 45.71 5.80
2789 3079 2.741985 GCACATTTTTGGGCGCCC 60.742 61.111 39.40 39.40 0.00 6.13
2790 3080 2.741985 GGCACATTTTTGGGCGCC 60.742 61.111 21.18 21.18 39.54 6.53
2791 3081 2.028733 CTGGCACATTTTTGGGCGC 61.029 57.895 0.00 0.00 39.54 6.53
2792 3082 0.247185 ATCTGGCACATTTTTGGGCG 59.753 50.000 0.00 0.00 39.54 6.13
2793 3083 3.460103 CATATCTGGCACATTTTTGGGC 58.540 45.455 0.00 0.00 38.20 5.36
2794 3084 3.181463 CCCATATCTGGCACATTTTTGGG 60.181 47.826 4.52 4.52 41.64 4.12
2795 3085 3.181463 CCCCATATCTGGCACATTTTTGG 60.181 47.826 0.00 0.00 41.64 3.28
2796 3086 3.181463 CCCCCATATCTGGCACATTTTTG 60.181 47.826 0.00 0.00 41.64 2.44
2797 3087 3.040477 CCCCCATATCTGGCACATTTTT 58.960 45.455 0.00 0.00 41.64 1.94
2798 3088 2.681422 CCCCCATATCTGGCACATTTT 58.319 47.619 0.00 0.00 41.64 1.82
2799 3089 1.758841 GCCCCCATATCTGGCACATTT 60.759 52.381 0.00 0.00 44.70 2.32
2800 3090 0.178953 GCCCCCATATCTGGCACATT 60.179 55.000 0.00 0.00 44.70 2.71
2801 3091 1.462035 GCCCCCATATCTGGCACAT 59.538 57.895 0.00 0.00 44.70 3.21
2802 3092 2.926250 GCCCCCATATCTGGCACA 59.074 61.111 0.00 0.00 44.70 4.57
2803 3093 2.281761 CGCCCCCATATCTGGCAC 60.282 66.667 7.29 0.00 45.63 5.01
2804 3094 4.269523 GCGCCCCCATATCTGGCA 62.270 66.667 0.00 0.00 45.63 4.92
2837 3127 3.583276 TACGACCTGCAACGGGCTG 62.583 63.158 11.18 0.00 45.15 4.85
2838 3128 3.296709 CTACGACCTGCAACGGGCT 62.297 63.158 11.18 0.00 45.15 5.19
2839 3129 2.813908 CTACGACCTGCAACGGGC 60.814 66.667 11.18 0.39 45.13 6.13
2840 3130 2.813908 GCTACGACCTGCAACGGG 60.814 66.667 11.18 1.11 35.68 5.28
2841 3131 2.884087 ATCGCTACGACCTGCAACGG 62.884 60.000 11.18 1.81 39.18 4.44
2842 3132 1.472276 GATCGCTACGACCTGCAACG 61.472 60.000 0.00 6.16 39.18 4.10
2843 3133 0.179134 AGATCGCTACGACCTGCAAC 60.179 55.000 0.00 0.00 39.18 4.17
2844 3134 0.100682 GAGATCGCTACGACCTGCAA 59.899 55.000 0.00 0.00 39.18 4.08
2845 3135 1.029947 TGAGATCGCTACGACCTGCA 61.030 55.000 0.00 0.00 39.18 4.41
2846 3136 0.592754 GTGAGATCGCTACGACCTGC 60.593 60.000 0.00 0.00 39.18 4.85
2847 3137 0.029567 GGTGAGATCGCTACGACCTG 59.970 60.000 0.00 0.00 39.18 4.00
2848 3138 0.107116 AGGTGAGATCGCTACGACCT 60.107 55.000 1.02 1.02 39.18 3.85
2849 3139 0.029567 CAGGTGAGATCGCTACGACC 59.970 60.000 0.00 0.00 39.18 4.79
2850 3140 0.592754 GCAGGTGAGATCGCTACGAC 60.593 60.000 0.00 0.00 39.18 4.34
2851 3141 1.728069 GCAGGTGAGATCGCTACGA 59.272 57.895 0.00 0.00 41.13 3.43
2852 3142 1.655654 CGCAGGTGAGATCGCTACG 60.656 63.158 0.00 0.00 0.00 3.51
2853 3143 4.310672 CGCAGGTGAGATCGCTAC 57.689 61.111 0.00 0.00 0.00 3.58
2866 3156 0.165944 CAAACCTTTAGTCGCCGCAG 59.834 55.000 0.00 0.00 0.00 5.18
2867 3157 0.533308 ACAAACCTTTAGTCGCCGCA 60.533 50.000 0.00 0.00 0.00 5.69
2868 3158 0.589708 AACAAACCTTTAGTCGCCGC 59.410 50.000 0.00 0.00 0.00 6.53
2869 3159 2.140717 AGAACAAACCTTTAGTCGCCG 58.859 47.619 0.00 0.00 0.00 6.46
2870 3160 4.201980 ACAAAGAACAAACCTTTAGTCGCC 60.202 41.667 0.00 0.00 33.03 5.54
2871 3161 4.916870 ACAAAGAACAAACCTTTAGTCGC 58.083 39.130 0.00 0.00 33.03 5.19
2872 3162 6.114221 TGACAAAGAACAAACCTTTAGTCG 57.886 37.500 0.00 0.00 36.12 4.18
2873 3163 6.851330 CGATGACAAAGAACAAACCTTTAGTC 59.149 38.462 0.00 0.00 35.18 2.59
2874 3164 6.238648 CCGATGACAAAGAACAAACCTTTAGT 60.239 38.462 0.00 0.00 33.03 2.24
2875 3165 6.142817 CCGATGACAAAGAACAAACCTTTAG 58.857 40.000 0.00 0.00 33.03 1.85
2876 3166 5.591067 ACCGATGACAAAGAACAAACCTTTA 59.409 36.000 0.00 0.00 33.03 1.85
2877 3167 4.401202 ACCGATGACAAAGAACAAACCTTT 59.599 37.500 0.00 0.00 34.46 3.11
2878 3168 3.951680 ACCGATGACAAAGAACAAACCTT 59.048 39.130 0.00 0.00 0.00 3.50
2879 3169 3.315191 CACCGATGACAAAGAACAAACCT 59.685 43.478 0.00 0.00 0.00 3.50
2880 3170 3.066203 ACACCGATGACAAAGAACAAACC 59.934 43.478 0.00 0.00 0.00 3.27
2881 3171 4.287238 ACACCGATGACAAAGAACAAAC 57.713 40.909 0.00 0.00 0.00 2.93
2882 3172 5.180492 GGATACACCGATGACAAAGAACAAA 59.820 40.000 0.00 0.00 0.00 2.83
2883 3173 4.693566 GGATACACCGATGACAAAGAACAA 59.306 41.667 0.00 0.00 0.00 2.83
2884 3174 4.250464 GGATACACCGATGACAAAGAACA 58.750 43.478 0.00 0.00 0.00 3.18
2885 3175 4.250464 TGGATACACCGATGACAAAGAAC 58.750 43.478 0.00 0.00 46.17 3.01
2886 3176 4.545208 TGGATACACCGATGACAAAGAA 57.455 40.909 0.00 0.00 46.17 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.