Multiple sequence alignment - TraesCS2A01G391800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G391800 | chr2A | 100.000 | 2452 | 0 | 0 | 1 | 2452 | 642198346 | 642200797 | 0.000000e+00 | 4529 |
1 | TraesCS2A01G391800 | chr2A | 90.578 | 329 | 23 | 5 | 2105 | 2426 | 745402974 | 745402647 | 1.740000e-116 | 429 |
2 | TraesCS2A01G391800 | chr2B | 87.628 | 1956 | 97 | 59 | 218 | 2105 | 583768476 | 583770354 | 0.000000e+00 | 2137 |
3 | TraesCS2A01G391800 | chr2B | 90.222 | 225 | 11 | 2 | 1 | 224 | 583767529 | 583767743 | 1.440000e-72 | 283 |
4 | TraesCS2A01G391800 | chr2D | 91.222 | 1367 | 56 | 22 | 1 | 1355 | 497900275 | 497901589 | 0.000000e+00 | 1801 |
5 | TraesCS2A01G391800 | chr2D | 89.542 | 765 | 35 | 16 | 1354 | 2105 | 497901762 | 497902494 | 0.000000e+00 | 928 |
6 | TraesCS2A01G391800 | chr2D | 89.024 | 328 | 28 | 7 | 2093 | 2414 | 36275102 | 36275427 | 1.370000e-107 | 399 |
7 | TraesCS2A01G391800 | chr7A | 92.114 | 317 | 20 | 2 | 2105 | 2416 | 690129123 | 690128807 | 2.240000e-120 | 442 |
8 | TraesCS2A01G391800 | chr5A | 91.195 | 318 | 21 | 4 | 2105 | 2416 | 26956987 | 26956671 | 2.250000e-115 | 425 |
9 | TraesCS2A01G391800 | chr5A | 90.625 | 320 | 24 | 3 | 2103 | 2416 | 228894950 | 228895269 | 1.050000e-113 | 420 |
10 | TraesCS2A01G391800 | chr3A | 91.167 | 317 | 23 | 3 | 2105 | 2416 | 690436418 | 690436734 | 2.250000e-115 | 425 |
11 | TraesCS2A01G391800 | chr3A | 89.655 | 319 | 27 | 4 | 2104 | 2416 | 338489990 | 338490308 | 3.800000e-108 | 401 |
12 | TraesCS2A01G391800 | chr6A | 90.343 | 321 | 21 | 7 | 2095 | 2407 | 420569667 | 420569985 | 1.750000e-111 | 412 |
13 | TraesCS2A01G391800 | chr1A | 90.764 | 314 | 22 | 4 | 2107 | 2414 | 396864002 | 396863690 | 1.750000e-111 | 412 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G391800 | chr2A | 642198346 | 642200797 | 2451 | False | 4529.0 | 4529 | 100.000 | 1 | 2452 | 1 | chr2A.!!$F1 | 2451 |
1 | TraesCS2A01G391800 | chr2B | 583767529 | 583770354 | 2825 | False | 1210.0 | 2137 | 88.925 | 1 | 2105 | 2 | chr2B.!!$F1 | 2104 |
2 | TraesCS2A01G391800 | chr2D | 497900275 | 497902494 | 2219 | False | 1364.5 | 1801 | 90.382 | 1 | 2105 | 2 | chr2D.!!$F2 | 2104 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
455 | 1203 | 0.179092 | CTCGGCATCATGTCTGCAGA | 60.179 | 55.0 | 13.74 | 13.74 | 40.68 | 4.26 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1674 | 2652 | 0.03582 | GCCGTTGGTTCACCCTCATA | 60.036 | 55.0 | 0.0 | 0.0 | 34.29 | 2.15 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
78 | 79 | 1.305930 | GCCTCGCCTCGGACAAATTT | 61.306 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
88 | 89 | 5.563867 | GCCTCGGACAAATTTTGACACATAA | 60.564 | 40.000 | 15.81 | 0.00 | 0.00 | 1.90 |
141 | 142 | 1.080995 | CAGCGCTCAACCTCTAGTGC | 61.081 | 60.000 | 7.13 | 0.00 | 47.00 | 4.40 |
170 | 172 | 1.662629 | CATACTTGGCAGAACTGAGCG | 59.337 | 52.381 | 5.97 | 0.00 | 0.00 | 5.03 |
181 | 183 | 4.645956 | CAGAACTGAGCGATCACATTTTC | 58.354 | 43.478 | 0.00 | 0.41 | 0.00 | 2.29 |
213 | 215 | 0.940126 | AGAGCAACTGAGCAAACACG | 59.060 | 50.000 | 0.00 | 0.00 | 36.85 | 4.49 |
254 | 996 | 6.105333 | GTGAATGATAAACAGACAGAGCTCT | 58.895 | 40.000 | 11.45 | 11.45 | 0.00 | 4.09 |
255 | 997 | 6.593382 | GTGAATGATAAACAGACAGAGCTCTT | 59.407 | 38.462 | 15.27 | 5.77 | 0.00 | 2.85 |
256 | 998 | 7.118971 | GTGAATGATAAACAGACAGAGCTCTTT | 59.881 | 37.037 | 15.27 | 8.10 | 0.00 | 2.52 |
257 | 999 | 7.663081 | TGAATGATAAACAGACAGAGCTCTTTT | 59.337 | 33.333 | 15.27 | 14.10 | 0.00 | 2.27 |
258 | 1000 | 7.992754 | ATGATAAACAGACAGAGCTCTTTTT | 57.007 | 32.000 | 15.27 | 10.72 | 0.00 | 1.94 |
259 | 1001 | 7.426929 | TGATAAACAGACAGAGCTCTTTTTC | 57.573 | 36.000 | 15.27 | 10.94 | 0.00 | 2.29 |
260 | 1002 | 7.220030 | TGATAAACAGACAGAGCTCTTTTTCT | 58.780 | 34.615 | 15.27 | 13.14 | 0.00 | 2.52 |
266 | 1008 | 7.275920 | ACAGACAGAGCTCTTTTTCTTTTCTA | 58.724 | 34.615 | 15.27 | 0.00 | 0.00 | 2.10 |
285 | 1027 | 5.692115 | TCTATTCTAAGAACATGGTGGCA | 57.308 | 39.130 | 0.00 | 0.00 | 0.00 | 4.92 |
321 | 1063 | 3.893521 | ACCGAAAAGAAGGGAAAAGTCA | 58.106 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
416 | 1164 | 4.973168 | TGTTGCTGATTAGACTTCCAACT | 58.027 | 39.130 | 0.00 | 0.00 | 34.01 | 3.16 |
417 | 1165 | 4.756642 | TGTTGCTGATTAGACTTCCAACTG | 59.243 | 41.667 | 0.00 | 0.00 | 34.01 | 3.16 |
455 | 1203 | 0.179092 | CTCGGCATCATGTCTGCAGA | 60.179 | 55.000 | 13.74 | 13.74 | 40.68 | 4.26 |
456 | 1204 | 0.460811 | TCGGCATCATGTCTGCAGAC | 60.461 | 55.000 | 35.04 | 35.04 | 44.97 | 3.51 |
457 | 1205 | 0.461516 | CGGCATCATGTCTGCAGACT | 60.462 | 55.000 | 38.81 | 25.24 | 44.99 | 3.24 |
458 | 1206 | 1.015109 | GGCATCATGTCTGCAGACTG | 58.985 | 55.000 | 38.81 | 32.21 | 44.99 | 3.51 |
459 | 1207 | 0.377554 | GCATCATGTCTGCAGACTGC | 59.622 | 55.000 | 38.81 | 34.58 | 44.99 | 4.40 |
479 | 1227 | 1.823899 | GCTATGGGTTTGGCTCCGG | 60.824 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
512 | 1260 | 3.694734 | TCGACGTATATTTGGTTCCGTC | 58.305 | 45.455 | 0.00 | 0.00 | 40.75 | 4.79 |
515 | 1263 | 3.699067 | ACGTATATTTGGTTCCGTCTCG | 58.301 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
536 | 1284 | 1.342082 | CGCTGTCTTTGGACGTACGG | 61.342 | 60.000 | 21.06 | 0.00 | 44.83 | 4.02 |
539 | 1287 | 1.081242 | GTCTTTGGACGTACGGCGA | 60.081 | 57.895 | 21.06 | 11.81 | 44.77 | 5.54 |
590 | 1339 | 1.641123 | CGTGGGGGTTCGTATTGTGC | 61.641 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
597 | 1349 | 2.671396 | GGGTTCGTATTGTGCACTACTG | 59.329 | 50.000 | 19.41 | 9.45 | 0.00 | 2.74 |
652 | 1404 | 3.495670 | AAACTCGAGCAGCAGTACTAG | 57.504 | 47.619 | 13.61 | 0.00 | 0.00 | 2.57 |
653 | 1405 | 2.116827 | ACTCGAGCAGCAGTACTAGT | 57.883 | 50.000 | 13.61 | 0.00 | 0.00 | 2.57 |
654 | 1406 | 3.263489 | ACTCGAGCAGCAGTACTAGTA | 57.737 | 47.619 | 13.61 | 0.00 | 0.00 | 1.82 |
655 | 1407 | 2.937799 | ACTCGAGCAGCAGTACTAGTAC | 59.062 | 50.000 | 23.03 | 23.03 | 36.35 | 2.73 |
656 | 1408 | 2.286872 | TCGAGCAGCAGTACTAGTACC | 58.713 | 52.381 | 25.97 | 13.92 | 36.75 | 3.34 |
657 | 1409 | 1.334243 | CGAGCAGCAGTACTAGTACCC | 59.666 | 57.143 | 25.97 | 18.20 | 36.75 | 3.69 |
658 | 1410 | 1.334243 | GAGCAGCAGTACTAGTACCCG | 59.666 | 57.143 | 25.97 | 19.22 | 36.75 | 5.28 |
659 | 1411 | 0.384669 | GCAGCAGTACTAGTACCCGG | 59.615 | 60.000 | 25.97 | 18.90 | 36.75 | 5.73 |
697 | 1449 | 3.994392 | GTGGAGTTACCGTATATGCCATG | 59.006 | 47.826 | 0.00 | 0.00 | 42.61 | 3.66 |
702 | 1454 | 0.472044 | ACCGTATATGCCATGCACCA | 59.528 | 50.000 | 0.00 | 0.00 | 43.04 | 4.17 |
929 | 1687 | 2.030628 | GCCGCTGGATTACTCTACTCTC | 60.031 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
930 | 1688 | 3.482436 | CCGCTGGATTACTCTACTCTCT | 58.518 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
992 | 1750 | 1.002430 | CTGCAGACAGTTAGGCTTGGA | 59.998 | 52.381 | 8.42 | 0.00 | 39.22 | 3.53 |
1050 | 1814 | 4.703379 | AATGGTGCCCAAAGAATTGAAA | 57.297 | 36.364 | 0.00 | 0.00 | 38.94 | 2.69 |
1052 | 1816 | 2.368221 | TGGTGCCCAAAGAATTGAAAGG | 59.632 | 45.455 | 0.00 | 0.00 | 38.94 | 3.11 |
1118 | 1885 | 1.004918 | GTCGTACTTGTGCTGCCCT | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1119 | 1886 | 1.014564 | GTCGTACTTGTGCTGCCCTC | 61.015 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1120 | 1887 | 1.741770 | CGTACTTGTGCTGCCCTCC | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
1138 | 1905 | 0.741221 | CCTGCCTTTACTCGGTGCTC | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1146 | 1913 | 2.180159 | TACTCGGTGCTCCTTTGCCC | 62.180 | 60.000 | 2.85 | 0.00 | 0.00 | 5.36 |
1147 | 1914 | 3.249189 | TCGGTGCTCCTTTGCCCT | 61.249 | 61.111 | 2.85 | 0.00 | 0.00 | 5.19 |
1148 | 1915 | 2.282462 | CGGTGCTCCTTTGCCCTT | 60.282 | 61.111 | 2.85 | 0.00 | 0.00 | 3.95 |
1149 | 1916 | 1.903404 | CGGTGCTCCTTTGCCCTTT | 60.903 | 57.895 | 2.85 | 0.00 | 0.00 | 3.11 |
1150 | 1917 | 1.667722 | GGTGCTCCTTTGCCCTTTG | 59.332 | 57.895 | 0.00 | 0.00 | 0.00 | 2.77 |
1151 | 1918 | 1.667722 | GTGCTCCTTTGCCCTTTGG | 59.332 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
1193 | 1968 | 4.023980 | TGACCATGACCTTGTCCTAGTAG | 58.976 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
1194 | 1969 | 3.375699 | ACCATGACCTTGTCCTAGTAGG | 58.624 | 50.000 | 10.24 | 10.24 | 36.46 | 3.18 |
1195 | 1970 | 3.012502 | ACCATGACCTTGTCCTAGTAGGA | 59.987 | 47.826 | 15.33 | 15.33 | 43.43 | 2.94 |
1294 | 2072 | 2.125512 | CTCGACTTCCAAGGGCGG | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
1378 | 2330 | 2.997897 | GAGTCCTGGCGTGGTCCT | 60.998 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1435 | 2395 | 3.352524 | GTCTGACCGACCGACAGT | 58.647 | 61.111 | 0.00 | 0.00 | 36.62 | 3.55 |
1659 | 2637 | 3.082579 | GCTCGCTCCATCGGGAACT | 62.083 | 63.158 | 0.00 | 0.00 | 44.38 | 3.01 |
1689 | 2670 | 0.981183 | AGCGTATGAGGGTGAACCAA | 59.019 | 50.000 | 1.16 | 0.00 | 43.89 | 3.67 |
1795 | 2776 | 1.217882 | CCGTGTCAACTGTCAACTCC | 58.782 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1864 | 2845 | 3.891400 | CGATTGGCGGCACATGGG | 61.891 | 66.667 | 12.92 | 0.00 | 36.03 | 4.00 |
1980 | 2961 | 2.263852 | GTCGTCCCCCGTTCCTTC | 59.736 | 66.667 | 0.00 | 0.00 | 37.94 | 3.46 |
1991 | 2972 | 3.558321 | CCCCGTTCCTTCATTTGTCTACA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
2058 | 3039 | 4.424626 | AGCTCGTTGTACACACATAGATG | 58.575 | 43.478 | 0.00 | 0.00 | 33.76 | 2.90 |
2094 | 3079 | 2.049433 | CTCCGGACTGCGACGTTT | 60.049 | 61.111 | 0.00 | 0.00 | 0.00 | 3.60 |
2105 | 3090 | 6.237648 | CGGACTGCGACGTTTTAATAGTATTT | 60.238 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
2106 | 3091 | 7.044117 | CGGACTGCGACGTTTTAATAGTATTTA | 60.044 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2107 | 3092 | 8.264632 | GGACTGCGACGTTTTAATAGTATTTAG | 58.735 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
2108 | 3093 | 8.123445 | ACTGCGACGTTTTAATAGTATTTAGG | 57.877 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2109 | 3094 | 7.223387 | ACTGCGACGTTTTAATAGTATTTAGGG | 59.777 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
2110 | 3095 | 7.041107 | TGCGACGTTTTAATAGTATTTAGGGT | 58.959 | 34.615 | 0.00 | 0.00 | 0.00 | 4.34 |
2111 | 3096 | 7.222611 | TGCGACGTTTTAATAGTATTTAGGGTC | 59.777 | 37.037 | 0.00 | 3.02 | 0.00 | 4.46 |
2112 | 3097 | 7.436376 | GCGACGTTTTAATAGTATTTAGGGTCT | 59.564 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2113 | 3098 | 9.950680 | CGACGTTTTAATAGTATTTAGGGTCTA | 57.049 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2132 | 3117 | 9.668497 | AGGGTCTATTTAATTTCAGTAAGTCAC | 57.332 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2133 | 3118 | 8.890718 | GGGTCTATTTAATTTCAGTAAGTCACC | 58.109 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
2134 | 3119 | 9.668497 | GGTCTATTTAATTTCAGTAAGTCACCT | 57.332 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
2168 | 3153 | 7.964604 | GTCAGGTGACTTAAAATCAGTAACT | 57.035 | 36.000 | 2.72 | 0.00 | 41.65 | 2.24 |
2169 | 3154 | 8.379457 | GTCAGGTGACTTAAAATCAGTAACTT | 57.621 | 34.615 | 2.72 | 0.00 | 41.65 | 2.66 |
2170 | 3155 | 9.485206 | GTCAGGTGACTTAAAATCAGTAACTTA | 57.515 | 33.333 | 2.72 | 0.00 | 41.65 | 2.24 |
2181 | 3166 | 7.535489 | AAATCAGTAACTTATAAGTCACGCC | 57.465 | 36.000 | 18.28 | 5.45 | 38.57 | 5.68 |
2182 | 3167 | 4.665212 | TCAGTAACTTATAAGTCACGCCG | 58.335 | 43.478 | 18.28 | 8.71 | 38.57 | 6.46 |
2183 | 3168 | 3.795101 | CAGTAACTTATAAGTCACGCCGG | 59.205 | 47.826 | 18.28 | 0.00 | 38.57 | 6.13 |
2184 | 3169 | 3.445096 | AGTAACTTATAAGTCACGCCGGT | 59.555 | 43.478 | 18.28 | 3.27 | 38.57 | 5.28 |
2185 | 3170 | 3.323751 | AACTTATAAGTCACGCCGGTT | 57.676 | 42.857 | 18.28 | 0.00 | 38.57 | 4.44 |
2186 | 3171 | 3.323751 | ACTTATAAGTCACGCCGGTTT | 57.676 | 42.857 | 12.50 | 0.00 | 32.86 | 3.27 |
2187 | 3172 | 4.454728 | ACTTATAAGTCACGCCGGTTTA | 57.545 | 40.909 | 12.50 | 0.00 | 32.86 | 2.01 |
2188 | 3173 | 4.819769 | ACTTATAAGTCACGCCGGTTTAA | 58.180 | 39.130 | 12.50 | 0.00 | 32.86 | 1.52 |
2189 | 3174 | 5.422145 | ACTTATAAGTCACGCCGGTTTAAT | 58.578 | 37.500 | 12.50 | 0.00 | 32.86 | 1.40 |
2190 | 3175 | 5.876460 | ACTTATAAGTCACGCCGGTTTAATT | 59.124 | 36.000 | 12.50 | 0.00 | 32.86 | 1.40 |
2191 | 3176 | 7.041107 | ACTTATAAGTCACGCCGGTTTAATTA | 58.959 | 34.615 | 12.50 | 0.00 | 32.86 | 1.40 |
2192 | 3177 | 5.723492 | ATAAGTCACGCCGGTTTAATTAC | 57.277 | 39.130 | 1.90 | 0.00 | 0.00 | 1.89 |
2193 | 3178 | 2.349590 | AGTCACGCCGGTTTAATTACC | 58.650 | 47.619 | 1.90 | 0.00 | 34.72 | 2.85 |
2194 | 3179 | 2.075338 | GTCACGCCGGTTTAATTACCA | 58.925 | 47.619 | 1.90 | 0.00 | 38.12 | 3.25 |
2195 | 3180 | 2.075338 | TCACGCCGGTTTAATTACCAC | 58.925 | 47.619 | 1.90 | 0.00 | 38.12 | 4.16 |
2196 | 3181 | 1.130938 | CACGCCGGTTTAATTACCACC | 59.869 | 52.381 | 1.90 | 3.66 | 38.12 | 4.61 |
2197 | 3182 | 1.271271 | ACGCCGGTTTAATTACCACCA | 60.271 | 47.619 | 1.90 | 0.00 | 38.12 | 4.17 |
2198 | 3183 | 1.811359 | CGCCGGTTTAATTACCACCAA | 59.189 | 47.619 | 1.90 | 0.00 | 38.12 | 3.67 |
2199 | 3184 | 2.424246 | CGCCGGTTTAATTACCACCAAT | 59.576 | 45.455 | 1.90 | 0.00 | 38.12 | 3.16 |
2200 | 3185 | 3.626670 | CGCCGGTTTAATTACCACCAATA | 59.373 | 43.478 | 1.90 | 0.00 | 38.12 | 1.90 |
2201 | 3186 | 4.096081 | CGCCGGTTTAATTACCACCAATAA | 59.904 | 41.667 | 1.90 | 0.00 | 38.12 | 1.40 |
2202 | 3187 | 5.584442 | GCCGGTTTAATTACCACCAATAAG | 58.416 | 41.667 | 1.90 | 0.00 | 38.12 | 1.73 |
2203 | 3188 | 5.125900 | GCCGGTTTAATTACCACCAATAAGT | 59.874 | 40.000 | 1.90 | 0.00 | 38.12 | 2.24 |
2204 | 3189 | 6.678655 | GCCGGTTTAATTACCACCAATAAGTC | 60.679 | 42.308 | 1.90 | 0.00 | 38.12 | 3.01 |
2205 | 3190 | 6.374894 | CCGGTTTAATTACCACCAATAAGTCA | 59.625 | 38.462 | 11.83 | 0.00 | 38.12 | 3.41 |
2206 | 3191 | 7.067737 | CCGGTTTAATTACCACCAATAAGTCAT | 59.932 | 37.037 | 11.83 | 0.00 | 38.12 | 3.06 |
2207 | 3192 | 8.126700 | CGGTTTAATTACCACCAATAAGTCATC | 58.873 | 37.037 | 11.83 | 0.00 | 38.12 | 2.92 |
2208 | 3193 | 9.185680 | GGTTTAATTACCACCAATAAGTCATCT | 57.814 | 33.333 | 7.81 | 0.00 | 38.12 | 2.90 |
2210 | 3195 | 9.967451 | TTTAATTACCACCAATAAGTCATCTGA | 57.033 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
2211 | 3196 | 7.865706 | AATTACCACCAATAAGTCATCTGAC | 57.134 | 36.000 | 2.01 | 2.01 | 45.08 | 3.51 |
2212 | 3197 | 4.222124 | ACCACCAATAAGTCATCTGACC | 57.778 | 45.455 | 6.71 | 0.00 | 45.85 | 4.02 |
2213 | 3198 | 3.587061 | ACCACCAATAAGTCATCTGACCA | 59.413 | 43.478 | 6.71 | 0.00 | 45.85 | 4.02 |
2214 | 3199 | 3.941483 | CCACCAATAAGTCATCTGACCAC | 59.059 | 47.826 | 6.71 | 0.00 | 45.85 | 4.16 |
2215 | 3200 | 4.565444 | CCACCAATAAGTCATCTGACCACA | 60.565 | 45.833 | 6.71 | 0.00 | 45.85 | 4.17 |
2216 | 3201 | 4.393062 | CACCAATAAGTCATCTGACCACAC | 59.607 | 45.833 | 6.71 | 0.00 | 45.85 | 3.82 |
2217 | 3202 | 3.941483 | CCAATAAGTCATCTGACCACACC | 59.059 | 47.826 | 6.71 | 0.00 | 45.85 | 4.16 |
2218 | 3203 | 4.323792 | CCAATAAGTCATCTGACCACACCT | 60.324 | 45.833 | 6.71 | 0.00 | 45.85 | 4.00 |
2219 | 3204 | 5.248640 | CAATAAGTCATCTGACCACACCTT | 58.751 | 41.667 | 6.71 | 0.00 | 45.85 | 3.50 |
2220 | 3205 | 3.864789 | AAGTCATCTGACCACACCTTT | 57.135 | 42.857 | 6.71 | 0.00 | 45.85 | 3.11 |
2221 | 3206 | 3.409026 | AGTCATCTGACCACACCTTTC | 57.591 | 47.619 | 6.71 | 0.00 | 45.85 | 2.62 |
2222 | 3207 | 2.975489 | AGTCATCTGACCACACCTTTCT | 59.025 | 45.455 | 6.71 | 0.00 | 45.85 | 2.52 |
2223 | 3208 | 4.160329 | AGTCATCTGACCACACCTTTCTA | 58.840 | 43.478 | 6.71 | 0.00 | 45.85 | 2.10 |
2224 | 3209 | 4.021016 | AGTCATCTGACCACACCTTTCTAC | 60.021 | 45.833 | 6.71 | 0.00 | 45.85 | 2.59 |
2225 | 3210 | 3.260884 | TCATCTGACCACACCTTTCTACC | 59.739 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
2226 | 3211 | 2.972348 | TCTGACCACACCTTTCTACCT | 58.028 | 47.619 | 0.00 | 0.00 | 0.00 | 3.08 |
2227 | 3212 | 3.314693 | TCTGACCACACCTTTCTACCTT | 58.685 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
2228 | 3213 | 3.071023 | TCTGACCACACCTTTCTACCTTG | 59.929 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
2229 | 3214 | 2.775384 | TGACCACACCTTTCTACCTTGT | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2230 | 3215 | 3.201266 | TGACCACACCTTTCTACCTTGTT | 59.799 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2231 | 3216 | 4.204799 | GACCACACCTTTCTACCTTGTTT | 58.795 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2232 | 3217 | 4.606210 | ACCACACCTTTCTACCTTGTTTT | 58.394 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
2233 | 3218 | 5.020795 | ACCACACCTTTCTACCTTGTTTTT | 58.979 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
2254 | 3239 | 3.724732 | TTATGTAAAGGTGGTGGGACC | 57.275 | 47.619 | 0.00 | 0.00 | 39.22 | 4.46 |
2255 | 3240 | 0.702316 | ATGTAAAGGTGGTGGGACCC | 59.298 | 55.000 | 2.45 | 2.45 | 37.50 | 4.46 |
2256 | 3241 | 0.698198 | TGTAAAGGTGGTGGGACCCA | 60.698 | 55.000 | 9.95 | 9.95 | 37.50 | 4.51 |
2257 | 3242 | 0.702316 | GTAAAGGTGGTGGGACCCAT | 59.298 | 55.000 | 18.51 | 0.32 | 37.50 | 4.00 |
2258 | 3243 | 0.701731 | TAAAGGTGGTGGGACCCATG | 59.298 | 55.000 | 18.51 | 0.00 | 37.50 | 3.66 |
2259 | 3244 | 2.730129 | AAAGGTGGTGGGACCCATGC | 62.730 | 60.000 | 18.51 | 9.82 | 37.50 | 4.06 |
2260 | 3245 | 3.978193 | GGTGGTGGGACCCATGCA | 61.978 | 66.667 | 18.51 | 0.00 | 37.50 | 3.96 |
2261 | 3246 | 2.117206 | GTGGTGGGACCCATGCAA | 59.883 | 61.111 | 18.51 | 0.00 | 37.50 | 4.08 |
2262 | 3247 | 1.532794 | GTGGTGGGACCCATGCAAA | 60.533 | 57.895 | 18.51 | 0.00 | 37.50 | 3.68 |
2263 | 3248 | 1.118356 | GTGGTGGGACCCATGCAAAA | 61.118 | 55.000 | 18.51 | 0.00 | 37.50 | 2.44 |
2264 | 3249 | 0.831288 | TGGTGGGACCCATGCAAAAG | 60.831 | 55.000 | 18.51 | 0.00 | 37.50 | 2.27 |
2265 | 3250 | 1.543944 | GGTGGGACCCATGCAAAAGG | 61.544 | 60.000 | 18.51 | 0.00 | 35.28 | 3.11 |
2270 | 3255 | 4.537260 | CCCATGCAAAAGGGGTGA | 57.463 | 55.556 | 13.05 | 0.00 | 45.54 | 4.02 |
2271 | 3256 | 1.974543 | CCCATGCAAAAGGGGTGAC | 59.025 | 57.895 | 13.05 | 0.00 | 45.54 | 3.67 |
2272 | 3257 | 0.542702 | CCCATGCAAAAGGGGTGACT | 60.543 | 55.000 | 13.05 | 0.00 | 45.54 | 3.41 |
2273 | 3258 | 1.341080 | CCATGCAAAAGGGGTGACTT | 58.659 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2274 | 3259 | 2.524306 | CCATGCAAAAGGGGTGACTTA | 58.476 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2275 | 3260 | 3.099141 | CCATGCAAAAGGGGTGACTTAT | 58.901 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
2276 | 3261 | 4.277476 | CCATGCAAAAGGGGTGACTTATA | 58.723 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
2277 | 3262 | 4.709397 | CCATGCAAAAGGGGTGACTTATAA | 59.291 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
2278 | 3263 | 5.163519 | CCATGCAAAAGGGGTGACTTATAAG | 60.164 | 44.000 | 11.05 | 11.05 | 0.00 | 1.73 |
2279 | 3264 | 4.993028 | TGCAAAAGGGGTGACTTATAAGT | 58.007 | 39.130 | 18.05 | 18.05 | 43.16 | 2.24 |
2280 | 3265 | 5.390387 | TGCAAAAGGGGTGACTTATAAGTT | 58.610 | 37.500 | 18.96 | 3.63 | 39.88 | 2.66 |
2281 | 3266 | 5.836358 | TGCAAAAGGGGTGACTTATAAGTTT | 59.164 | 36.000 | 18.96 | 5.93 | 39.88 | 2.66 |
2282 | 3267 | 6.325286 | TGCAAAAGGGGTGACTTATAAGTTTT | 59.675 | 34.615 | 18.96 | 11.32 | 39.88 | 2.43 |
2283 | 3268 | 7.506261 | TGCAAAAGGGGTGACTTATAAGTTTTA | 59.494 | 33.333 | 18.96 | 6.80 | 39.88 | 1.52 |
2284 | 3269 | 8.361889 | GCAAAAGGGGTGACTTATAAGTTTTAA | 58.638 | 33.333 | 18.96 | 3.77 | 39.88 | 1.52 |
2285 | 3270 | 9.908152 | CAAAAGGGGTGACTTATAAGTTTTAAG | 57.092 | 33.333 | 18.96 | 10.49 | 39.88 | 1.85 |
2286 | 3271 | 9.650714 | AAAAGGGGTGACTTATAAGTTTTAAGT | 57.349 | 29.630 | 18.96 | 15.86 | 41.41 | 2.24 |
2287 | 3272 | 9.650714 | AAAGGGGTGACTTATAAGTTTTAAGTT | 57.349 | 29.630 | 18.96 | 7.30 | 39.40 | 2.66 |
2288 | 3273 | 8.631480 | AGGGGTGACTTATAAGTTTTAAGTTG | 57.369 | 34.615 | 18.96 | 0.00 | 39.40 | 3.16 |
2289 | 3274 | 7.668469 | AGGGGTGACTTATAAGTTTTAAGTTGG | 59.332 | 37.037 | 18.96 | 0.00 | 39.40 | 3.77 |
2290 | 3275 | 7.666804 | GGGGTGACTTATAAGTTTTAAGTTGGA | 59.333 | 37.037 | 18.96 | 5.34 | 39.40 | 3.53 |
2291 | 3276 | 8.727910 | GGGTGACTTATAAGTTTTAAGTTGGAG | 58.272 | 37.037 | 18.96 | 0.00 | 39.40 | 3.86 |
2292 | 3277 | 9.281371 | GGTGACTTATAAGTTTTAAGTTGGAGT | 57.719 | 33.333 | 18.96 | 0.00 | 39.40 | 3.85 |
2294 | 3279 | 9.280174 | TGACTTATAAGTTTTAAGTTGGAGTGG | 57.720 | 33.333 | 18.96 | 0.00 | 39.40 | 4.00 |
2295 | 3280 | 9.498176 | GACTTATAAGTTTTAAGTTGGAGTGGA | 57.502 | 33.333 | 18.96 | 0.00 | 39.40 | 4.02 |
2296 | 3281 | 9.503399 | ACTTATAAGTTTTAAGTTGGAGTGGAG | 57.497 | 33.333 | 12.50 | 0.00 | 36.70 | 3.86 |
2297 | 3282 | 6.819397 | ATAAGTTTTAAGTTGGAGTGGAGC | 57.181 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
2298 | 3283 | 4.164843 | AGTTTTAAGTTGGAGTGGAGCA | 57.835 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
2299 | 3284 | 4.532834 | AGTTTTAAGTTGGAGTGGAGCAA | 58.467 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
2300 | 3285 | 4.338400 | AGTTTTAAGTTGGAGTGGAGCAAC | 59.662 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
2301 | 3286 | 3.857157 | TTAAGTTGGAGTGGAGCAACT | 57.143 | 42.857 | 0.00 | 0.00 | 39.27 | 3.16 |
2302 | 3287 | 2.736670 | AAGTTGGAGTGGAGCAACTT | 57.263 | 45.000 | 0.00 | 0.00 | 41.36 | 2.66 |
2303 | 3288 | 3.857157 | AAGTTGGAGTGGAGCAACTTA | 57.143 | 42.857 | 0.32 | 0.00 | 43.44 | 2.24 |
2304 | 3289 | 4.373156 | AAGTTGGAGTGGAGCAACTTAT | 57.627 | 40.909 | 0.32 | 0.00 | 43.44 | 1.73 |
2305 | 3290 | 3.679389 | AGTTGGAGTGGAGCAACTTATG | 58.321 | 45.455 | 0.00 | 0.00 | 34.63 | 1.90 |
2306 | 3291 | 3.327757 | AGTTGGAGTGGAGCAACTTATGA | 59.672 | 43.478 | 0.00 | 0.00 | 34.63 | 2.15 |
2307 | 3292 | 3.334583 | TGGAGTGGAGCAACTTATGAC | 57.665 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
2308 | 3293 | 2.906389 | TGGAGTGGAGCAACTTATGACT | 59.094 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2309 | 3294 | 3.327757 | TGGAGTGGAGCAACTTATGACTT | 59.672 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2310 | 3295 | 4.530553 | TGGAGTGGAGCAACTTATGACTTA | 59.469 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2311 | 3296 | 5.189736 | TGGAGTGGAGCAACTTATGACTTAT | 59.810 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2312 | 3297 | 6.382859 | TGGAGTGGAGCAACTTATGACTTATA | 59.617 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
2313 | 3298 | 7.093068 | TGGAGTGGAGCAACTTATGACTTATAA | 60.093 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2336 | 3321 | 7.563724 | AAGTTAGGGTGACTTATAAGTTGGA | 57.436 | 36.000 | 18.96 | 4.47 | 39.88 | 3.53 |
2337 | 3322 | 7.750947 | AGTTAGGGTGACTTATAAGTTGGAT | 57.249 | 36.000 | 18.96 | 7.78 | 39.88 | 3.41 |
2338 | 3323 | 7.793036 | AGTTAGGGTGACTTATAAGTTGGATC | 58.207 | 38.462 | 18.96 | 6.91 | 39.88 | 3.36 |
2339 | 3324 | 5.632034 | AGGGTGACTTATAAGTTGGATCC | 57.368 | 43.478 | 18.96 | 14.76 | 39.88 | 3.36 |
2340 | 3325 | 4.101119 | AGGGTGACTTATAAGTTGGATCCG | 59.899 | 45.833 | 18.96 | 0.00 | 39.88 | 4.18 |
2341 | 3326 | 4.141779 | GGGTGACTTATAAGTTGGATCCGT | 60.142 | 45.833 | 18.96 | 0.00 | 39.88 | 4.69 |
2342 | 3327 | 5.425630 | GGTGACTTATAAGTTGGATCCGTT | 58.574 | 41.667 | 18.96 | 3.14 | 39.88 | 4.44 |
2343 | 3328 | 5.878669 | GGTGACTTATAAGTTGGATCCGTTT | 59.121 | 40.000 | 18.96 | 3.92 | 39.88 | 3.60 |
2344 | 3329 | 6.183360 | GGTGACTTATAAGTTGGATCCGTTTG | 60.183 | 42.308 | 18.96 | 0.00 | 39.88 | 2.93 |
2345 | 3330 | 6.592607 | GTGACTTATAAGTTGGATCCGTTTGA | 59.407 | 38.462 | 18.96 | 0.00 | 39.88 | 2.69 |
2346 | 3331 | 6.592607 | TGACTTATAAGTTGGATCCGTTTGAC | 59.407 | 38.462 | 18.96 | 2.46 | 39.88 | 3.18 |
2347 | 3332 | 6.469410 | ACTTATAAGTTGGATCCGTTTGACA | 58.531 | 36.000 | 12.50 | 0.00 | 35.21 | 3.58 |
2348 | 3333 | 6.938030 | ACTTATAAGTTGGATCCGTTTGACAA | 59.062 | 34.615 | 12.50 | 0.00 | 35.21 | 3.18 |
2349 | 3334 | 7.446013 | ACTTATAAGTTGGATCCGTTTGACAAA | 59.554 | 33.333 | 12.50 | 0.00 | 35.21 | 2.83 |
2350 | 3335 | 4.993029 | AAGTTGGATCCGTTTGACAAAA | 57.007 | 36.364 | 7.39 | 0.00 | 0.00 | 2.44 |
2351 | 3336 | 5.529581 | AAGTTGGATCCGTTTGACAAAAT | 57.470 | 34.783 | 7.39 | 0.00 | 0.00 | 1.82 |
2352 | 3337 | 6.642707 | AAGTTGGATCCGTTTGACAAAATA | 57.357 | 33.333 | 7.39 | 0.00 | 0.00 | 1.40 |
2353 | 3338 | 6.642707 | AGTTGGATCCGTTTGACAAAATAA | 57.357 | 33.333 | 7.39 | 0.00 | 0.00 | 1.40 |
2354 | 3339 | 6.677913 | AGTTGGATCCGTTTGACAAAATAAG | 58.322 | 36.000 | 7.39 | 0.00 | 0.00 | 1.73 |
2355 | 3340 | 6.264518 | AGTTGGATCCGTTTGACAAAATAAGT | 59.735 | 34.615 | 7.39 | 0.00 | 0.00 | 2.24 |
2356 | 3341 | 6.249035 | TGGATCCGTTTGACAAAATAAGTC | 57.751 | 37.500 | 7.39 | 0.00 | 36.55 | 3.01 |
2357 | 3342 | 5.765677 | TGGATCCGTTTGACAAAATAAGTCA | 59.234 | 36.000 | 7.39 | 0.00 | 43.72 | 3.41 |
2358 | 3343 | 6.084277 | GGATCCGTTTGACAAAATAAGTCAC | 58.916 | 40.000 | 1.27 | 0.00 | 44.95 | 3.67 |
2359 | 3344 | 6.072673 | GGATCCGTTTGACAAAATAAGTCACT | 60.073 | 38.462 | 1.27 | 0.00 | 44.95 | 3.41 |
2360 | 3345 | 6.687081 | TCCGTTTGACAAAATAAGTCACTT | 57.313 | 33.333 | 1.27 | 0.00 | 44.95 | 3.16 |
2361 | 3346 | 7.090953 | TCCGTTTGACAAAATAAGTCACTTT | 57.909 | 32.000 | 1.27 | 0.00 | 44.95 | 2.66 |
2362 | 3347 | 7.540299 | TCCGTTTGACAAAATAAGTCACTTTT | 58.460 | 30.769 | 1.27 | 0.00 | 44.95 | 2.27 |
2363 | 3348 | 8.030106 | TCCGTTTGACAAAATAAGTCACTTTTT | 58.970 | 29.630 | 1.27 | 0.00 | 44.95 | 1.94 |
2364 | 3349 | 8.107564 | CCGTTTGACAAAATAAGTCACTTTTTG | 58.892 | 33.333 | 11.60 | 11.60 | 44.95 | 2.44 |
2365 | 3350 | 7.630606 | CGTTTGACAAAATAAGTCACTTTTTGC | 59.369 | 33.333 | 12.71 | 7.83 | 44.95 | 3.68 |
2366 | 3351 | 8.439286 | GTTTGACAAAATAAGTCACTTTTTGCA | 58.561 | 29.630 | 12.71 | 9.71 | 44.95 | 4.08 |
2367 | 3352 | 7.518731 | TGACAAAATAAGTCACTTTTTGCAC | 57.481 | 32.000 | 12.71 | 8.96 | 41.69 | 4.57 |
2368 | 3353 | 7.319646 | TGACAAAATAAGTCACTTTTTGCACT | 58.680 | 30.769 | 12.71 | 0.00 | 41.69 | 4.40 |
2369 | 3354 | 7.816995 | TGACAAAATAAGTCACTTTTTGCACTT | 59.183 | 29.630 | 12.71 | 0.00 | 41.69 | 3.16 |
2370 | 3355 | 8.546597 | ACAAAATAAGTCACTTTTTGCACTTT | 57.453 | 26.923 | 12.71 | 0.00 | 41.69 | 2.66 |
2371 | 3356 | 8.998377 | ACAAAATAAGTCACTTTTTGCACTTTT | 58.002 | 25.926 | 12.71 | 0.24 | 41.69 | 2.27 |
2372 | 3357 | 9.476761 | CAAAATAAGTCACTTTTTGCACTTTTC | 57.523 | 29.630 | 0.00 | 0.00 | 34.64 | 2.29 |
2373 | 3358 | 7.449934 | AATAAGTCACTTTTTGCACTTTTCG | 57.550 | 32.000 | 0.00 | 0.00 | 31.80 | 3.46 |
2374 | 3359 | 4.695217 | AGTCACTTTTTGCACTTTTCGA | 57.305 | 36.364 | 0.00 | 0.00 | 0.00 | 3.71 |
2375 | 3360 | 4.412207 | AGTCACTTTTTGCACTTTTCGAC | 58.588 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
2376 | 3361 | 4.156008 | AGTCACTTTTTGCACTTTTCGACT | 59.844 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
2377 | 3362 | 4.857037 | GTCACTTTTTGCACTTTTCGACTT | 59.143 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
2378 | 3363 | 6.025280 | GTCACTTTTTGCACTTTTCGACTTA | 58.975 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2379 | 3364 | 6.691388 | GTCACTTTTTGCACTTTTCGACTTAT | 59.309 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
2380 | 3365 | 7.853929 | GTCACTTTTTGCACTTTTCGACTTATA | 59.146 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2381 | 3366 | 8.399425 | TCACTTTTTGCACTTTTCGACTTATAA | 58.601 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2382 | 3367 | 8.682016 | CACTTTTTGCACTTTTCGACTTATAAG | 58.318 | 33.333 | 11.05 | 11.05 | 0.00 | 1.73 |
2383 | 3368 | 8.403236 | ACTTTTTGCACTTTTCGACTTATAAGT | 58.597 | 29.630 | 18.05 | 18.05 | 43.16 | 2.24 |
2384 | 3369 | 9.233232 | CTTTTTGCACTTTTCGACTTATAAGTT | 57.767 | 29.630 | 18.96 | 3.63 | 39.88 | 2.66 |
2385 | 3370 | 8.555166 | TTTTGCACTTTTCGACTTATAAGTTG | 57.445 | 30.769 | 22.32 | 22.32 | 39.88 | 3.16 |
2386 | 3371 | 6.236017 | TGCACTTTTCGACTTATAAGTTGG | 57.764 | 37.500 | 25.99 | 17.93 | 39.88 | 3.77 |
2387 | 3372 | 5.761234 | TGCACTTTTCGACTTATAAGTTGGT | 59.239 | 36.000 | 25.99 | 16.17 | 39.88 | 3.67 |
2388 | 3373 | 6.077838 | GCACTTTTCGACTTATAAGTTGGTG | 58.922 | 40.000 | 25.99 | 24.24 | 39.88 | 4.17 |
2389 | 3374 | 6.073440 | GCACTTTTCGACTTATAAGTTGGTGA | 60.073 | 38.462 | 27.32 | 18.11 | 39.88 | 4.02 |
2390 | 3375 | 7.288672 | CACTTTTCGACTTATAAGTTGGTGAC | 58.711 | 38.462 | 25.99 | 10.35 | 39.88 | 3.67 |
2391 | 3376 | 7.170998 | CACTTTTCGACTTATAAGTTGGTGACT | 59.829 | 37.037 | 25.99 | 9.24 | 39.88 | 3.41 |
2403 | 3388 | 6.783708 | AAGTTGGTGACTTATTTGAAACCA | 57.216 | 33.333 | 0.00 | 0.00 | 46.61 | 3.67 |
2404 | 3389 | 6.783708 | AGTTGGTGACTTATTTGAAACCAA | 57.216 | 33.333 | 1.07 | 1.07 | 43.50 | 3.67 |
2405 | 3390 | 7.176589 | AGTTGGTGACTTATTTGAAACCAAA | 57.823 | 32.000 | 6.65 | 0.00 | 46.21 | 3.28 |
2406 | 3391 | 7.039270 | AGTTGGTGACTTATTTGAAACCAAAC | 58.961 | 34.615 | 6.65 | 2.75 | 46.21 | 2.93 |
2407 | 3392 | 6.531503 | TGGTGACTTATTTGAAACCAAACA | 57.468 | 33.333 | 0.00 | 0.00 | 36.48 | 2.83 |
2408 | 3393 | 6.568869 | TGGTGACTTATTTGAAACCAAACAG | 58.431 | 36.000 | 0.00 | 0.00 | 36.48 | 3.16 |
2409 | 3394 | 5.983118 | GGTGACTTATTTGAAACCAAACAGG | 59.017 | 40.000 | 0.00 | 0.00 | 45.67 | 4.00 |
2410 | 3395 | 5.983118 | GTGACTTATTTGAAACCAAACAGGG | 59.017 | 40.000 | 0.00 | 0.00 | 43.89 | 4.45 |
2411 | 3396 | 4.956085 | ACTTATTTGAAACCAAACAGGGC | 58.044 | 39.130 | 0.00 | 0.00 | 43.89 | 5.19 |
2412 | 3397 | 2.928801 | ATTTGAAACCAAACAGGGCC | 57.071 | 45.000 | 0.00 | 0.00 | 43.89 | 5.80 |
2413 | 3398 | 1.872773 | TTTGAAACCAAACAGGGCCT | 58.127 | 45.000 | 0.00 | 0.00 | 43.89 | 5.19 |
2414 | 3399 | 1.872773 | TTGAAACCAAACAGGGCCTT | 58.127 | 45.000 | 1.32 | 0.00 | 43.89 | 4.35 |
2415 | 3400 | 2.757894 | TGAAACCAAACAGGGCCTTA | 57.242 | 45.000 | 1.32 | 0.00 | 43.89 | 2.69 |
2416 | 3401 | 3.033659 | TGAAACCAAACAGGGCCTTAA | 57.966 | 42.857 | 1.32 | 0.00 | 43.89 | 1.85 |
2417 | 3402 | 2.696187 | TGAAACCAAACAGGGCCTTAAC | 59.304 | 45.455 | 1.32 | 0.00 | 43.89 | 2.01 |
2418 | 3403 | 1.712056 | AACCAAACAGGGCCTTAACC | 58.288 | 50.000 | 1.32 | 0.00 | 43.89 | 2.85 |
2419 | 3404 | 0.857675 | ACCAAACAGGGCCTTAACCT | 59.142 | 50.000 | 1.32 | 0.00 | 43.89 | 3.50 |
2420 | 3405 | 1.219469 | ACCAAACAGGGCCTTAACCTT | 59.781 | 47.619 | 1.32 | 0.00 | 43.89 | 3.50 |
2421 | 3406 | 2.447811 | ACCAAACAGGGCCTTAACCTTA | 59.552 | 45.455 | 1.32 | 0.00 | 43.89 | 2.69 |
2422 | 3407 | 2.823747 | CCAAACAGGGCCTTAACCTTAC | 59.176 | 50.000 | 1.32 | 0.00 | 35.78 | 2.34 |
2423 | 3408 | 3.492337 | CAAACAGGGCCTTAACCTTACA | 58.508 | 45.455 | 1.32 | 0.00 | 35.78 | 2.41 |
2424 | 3409 | 3.887916 | AACAGGGCCTTAACCTTACAA | 57.112 | 42.857 | 1.32 | 0.00 | 35.78 | 2.41 |
2425 | 3410 | 3.887916 | ACAGGGCCTTAACCTTACAAA | 57.112 | 42.857 | 1.32 | 0.00 | 35.78 | 2.83 |
2426 | 3411 | 3.493334 | ACAGGGCCTTAACCTTACAAAC | 58.507 | 45.455 | 1.32 | 0.00 | 35.78 | 2.93 |
2427 | 3412 | 3.117436 | ACAGGGCCTTAACCTTACAAACA | 60.117 | 43.478 | 1.32 | 0.00 | 35.78 | 2.83 |
2428 | 3413 | 4.086457 | CAGGGCCTTAACCTTACAAACAT | 58.914 | 43.478 | 1.32 | 0.00 | 35.78 | 2.71 |
2429 | 3414 | 4.082245 | CAGGGCCTTAACCTTACAAACATG | 60.082 | 45.833 | 1.32 | 0.00 | 35.78 | 3.21 |
2430 | 3415 | 3.368013 | GGGCCTTAACCTTACAAACATGC | 60.368 | 47.826 | 0.84 | 0.00 | 0.00 | 4.06 |
2431 | 3416 | 3.368013 | GGCCTTAACCTTACAAACATGCC | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 4.40 |
2432 | 3417 | 3.257127 | GCCTTAACCTTACAAACATGCCA | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 4.92 |
2433 | 3418 | 4.805219 | CCTTAACCTTACAAACATGCCAC | 58.195 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
2434 | 3419 | 4.472286 | CTTAACCTTACAAACATGCCACG | 58.528 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
2435 | 3420 | 0.596082 | ACCTTACAAACATGCCACGC | 59.404 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2436 | 3421 | 0.595588 | CCTTACAAACATGCCACGCA | 59.404 | 50.000 | 0.00 | 0.00 | 44.86 | 5.24 |
2437 | 3422 | 1.665735 | CCTTACAAACATGCCACGCAC | 60.666 | 52.381 | 0.00 | 0.00 | 43.04 | 5.34 |
2438 | 3423 | 0.040870 | TTACAAACATGCCACGCACG | 60.041 | 50.000 | 0.00 | 0.00 | 43.04 | 5.34 |
2439 | 3424 | 2.450960 | TACAAACATGCCACGCACGC | 62.451 | 55.000 | 0.00 | 0.00 | 43.04 | 5.34 |
2440 | 3425 | 3.286751 | AAACATGCCACGCACGCT | 61.287 | 55.556 | 0.00 | 0.00 | 43.04 | 5.07 |
2441 | 3426 | 2.844451 | AAACATGCCACGCACGCTT | 61.844 | 52.632 | 0.00 | 0.00 | 43.04 | 4.68 |
2442 | 3427 | 2.731587 | AAACATGCCACGCACGCTTC | 62.732 | 55.000 | 0.00 | 0.00 | 43.04 | 3.86 |
2443 | 3428 | 4.465512 | CATGCCACGCACGCTTCC | 62.466 | 66.667 | 0.00 | 0.00 | 43.04 | 3.46 |
2448 | 3433 | 4.505217 | CACGCACGCTTCCGCATC | 62.505 | 66.667 | 0.00 | 0.00 | 38.22 | 3.91 |
2451 | 3436 | 3.567797 | GCACGCTTCCGCATCCTC | 61.568 | 66.667 | 0.00 | 0.00 | 38.22 | 3.71 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
65 | 66 | 3.980646 | TGTGTCAAAATTTGTCCGAGG | 57.019 | 42.857 | 5.56 | 0.00 | 0.00 | 4.63 |
66 | 67 | 6.797033 | GTCTTATGTGTCAAAATTTGTCCGAG | 59.203 | 38.462 | 5.56 | 0.00 | 0.00 | 4.63 |
67 | 68 | 6.293735 | GGTCTTATGTGTCAAAATTTGTCCGA | 60.294 | 38.462 | 5.56 | 0.00 | 0.00 | 4.55 |
68 | 69 | 5.856455 | GGTCTTATGTGTCAAAATTTGTCCG | 59.144 | 40.000 | 5.56 | 0.00 | 0.00 | 4.79 |
69 | 70 | 6.156519 | GGGTCTTATGTGTCAAAATTTGTCC | 58.843 | 40.000 | 5.56 | 0.00 | 0.00 | 4.02 |
78 | 79 | 2.232941 | GACGAGGGGTCTTATGTGTCAA | 59.767 | 50.000 | 0.00 | 0.00 | 42.62 | 3.18 |
141 | 142 | 2.103094 | TCTGCCAAGTATGAATCCGGAG | 59.897 | 50.000 | 11.34 | 0.00 | 0.00 | 4.63 |
170 | 172 | 7.496529 | TTCCTATCGGAATGAAAATGTGATC | 57.503 | 36.000 | 0.00 | 0.00 | 44.28 | 2.92 |
213 | 215 | 0.247655 | CACGCATCGCATGTAACCAC | 60.248 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
257 | 999 | 9.231297 | CCACCATGTTCTTAGAATAGAAAAGAA | 57.769 | 33.333 | 0.00 | 0.00 | 36.01 | 2.52 |
258 | 1000 | 7.336931 | GCCACCATGTTCTTAGAATAGAAAAGA | 59.663 | 37.037 | 0.00 | 0.00 | 36.01 | 2.52 |
259 | 1001 | 7.121168 | TGCCACCATGTTCTTAGAATAGAAAAG | 59.879 | 37.037 | 0.00 | 0.00 | 36.01 | 2.27 |
260 | 1002 | 6.945435 | TGCCACCATGTTCTTAGAATAGAAAA | 59.055 | 34.615 | 0.00 | 0.00 | 36.01 | 2.29 |
266 | 1008 | 3.445096 | GCTTGCCACCATGTTCTTAGAAT | 59.555 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
298 | 1040 | 5.061179 | TGACTTTTCCCTTCTTTTCGGTAG | 58.939 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
299 | 1041 | 5.038651 | TGACTTTTCCCTTCTTTTCGGTA | 57.961 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
300 | 1042 | 3.893521 | TGACTTTTCCCTTCTTTTCGGT | 58.106 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
301 | 1043 | 4.798574 | CATGACTTTTCCCTTCTTTTCGG | 58.201 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
302 | 1044 | 4.022849 | AGCATGACTTTTCCCTTCTTTTCG | 60.023 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
308 | 1050 | 1.740025 | CGGAGCATGACTTTTCCCTTC | 59.260 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
387 | 1135 | 4.428209 | AGTCTAATCAGCAACATCTCACG | 58.572 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
416 | 1164 | 2.910319 | AGTGACACATAAACTAGGGGCA | 59.090 | 45.455 | 8.59 | 0.00 | 0.00 | 5.36 |
417 | 1165 | 3.532542 | GAGTGACACATAAACTAGGGGC | 58.467 | 50.000 | 8.59 | 0.00 | 0.00 | 5.80 |
455 | 1203 | 0.967380 | GCCAAACCCATAGCTGCAGT | 60.967 | 55.000 | 16.64 | 4.79 | 0.00 | 4.40 |
456 | 1204 | 0.682209 | AGCCAAACCCATAGCTGCAG | 60.682 | 55.000 | 10.11 | 10.11 | 33.41 | 4.41 |
457 | 1205 | 0.680921 | GAGCCAAACCCATAGCTGCA | 60.681 | 55.000 | 1.02 | 0.00 | 35.23 | 4.41 |
458 | 1206 | 1.387295 | GGAGCCAAACCCATAGCTGC | 61.387 | 60.000 | 0.00 | 0.00 | 35.23 | 5.25 |
459 | 1207 | 1.097547 | CGGAGCCAAACCCATAGCTG | 61.098 | 60.000 | 0.00 | 0.00 | 35.23 | 4.24 |
460 | 1208 | 1.224592 | CGGAGCCAAACCCATAGCT | 59.775 | 57.895 | 0.00 | 0.00 | 38.56 | 3.32 |
461 | 1209 | 1.823899 | CCGGAGCCAAACCCATAGC | 60.824 | 63.158 | 0.00 | 0.00 | 0.00 | 2.97 |
479 | 1227 | 8.995906 | CCAAATATACGTCGAAAATGAAAGAAC | 58.004 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
512 | 1260 | 2.435741 | GTCCAAAGACAGCGACGAG | 58.564 | 57.895 | 0.00 | 0.00 | 42.99 | 4.18 |
515 | 1263 | 1.058404 | GTACGTCCAAAGACAGCGAC | 58.942 | 55.000 | 0.00 | 0.00 | 43.73 | 5.19 |
590 | 1339 | 2.449548 | CGCAAGTGGAGCAGTAGTG | 58.550 | 57.895 | 0.00 | 0.00 | 0.00 | 2.74 |
652 | 1404 | 3.352648 | TGTGTTAGGTACTACCGGGTAC | 58.647 | 50.000 | 6.32 | 9.53 | 44.90 | 3.34 |
653 | 1405 | 3.730215 | TGTGTTAGGTACTACCGGGTA | 57.270 | 47.619 | 6.32 | 6.73 | 44.90 | 3.69 |
654 | 1406 | 2.603075 | TGTGTTAGGTACTACCGGGT | 57.397 | 50.000 | 6.32 | 4.46 | 44.90 | 5.28 |
655 | 1407 | 2.827921 | ACTTGTGTTAGGTACTACCGGG | 59.172 | 50.000 | 6.32 | 0.00 | 44.90 | 5.73 |
656 | 1408 | 3.367703 | CCACTTGTGTTAGGTACTACCGG | 60.368 | 52.174 | 0.00 | 0.00 | 44.90 | 5.28 |
657 | 1409 | 3.507233 | TCCACTTGTGTTAGGTACTACCG | 59.493 | 47.826 | 0.00 | 0.00 | 44.90 | 4.02 |
658 | 1410 | 4.525874 | ACTCCACTTGTGTTAGGTACTACC | 59.474 | 45.833 | 0.00 | 0.00 | 42.67 | 3.18 |
659 | 1411 | 5.718724 | ACTCCACTTGTGTTAGGTACTAC | 57.281 | 43.478 | 0.00 | 0.00 | 42.67 | 2.73 |
697 | 1449 | 2.658268 | GCTTTGTGGCGTTGGTGC | 60.658 | 61.111 | 0.00 | 0.00 | 0.00 | 5.01 |
702 | 1454 | 1.066257 | CTGCTTGCTTTGTGGCGTT | 59.934 | 52.632 | 0.00 | 0.00 | 34.52 | 4.84 |
752 | 1506 | 2.182537 | GGCTGCAAAAGGCCATCG | 59.817 | 61.111 | 5.01 | 0.00 | 46.84 | 3.84 |
915 | 1673 | 7.179694 | TCCTAGAGGCTAGAGAGTAGAGTAATC | 59.820 | 44.444 | 0.00 | 0.00 | 34.44 | 1.75 |
929 | 1687 | 6.894654 | TGATCTAATCCAATCCTAGAGGCTAG | 59.105 | 42.308 | 0.00 | 0.00 | 34.44 | 3.42 |
930 | 1688 | 6.805150 | TGATCTAATCCAATCCTAGAGGCTA | 58.195 | 40.000 | 0.00 | 0.00 | 34.44 | 3.93 |
992 | 1750 | 1.822371 | GGTCGGTGGCCATTTGTTTAT | 59.178 | 47.619 | 9.72 | 0.00 | 0.00 | 1.40 |
1050 | 1814 | 2.915659 | TCCGTCGTTGCACCTCCT | 60.916 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
1052 | 1816 | 3.112709 | GCTCCGTCGTTGCACCTC | 61.113 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1118 | 1885 | 1.192146 | AGCACCGAGTAAAGGCAGGA | 61.192 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1119 | 1886 | 0.741221 | GAGCACCGAGTAAAGGCAGG | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1120 | 1887 | 0.741221 | GGAGCACCGAGTAAAGGCAG | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1193 | 1968 | 2.100418 | GTCGTCCAGGGTATTGTAGTCC | 59.900 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
1194 | 1969 | 2.223433 | CGTCGTCCAGGGTATTGTAGTC | 60.223 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
1195 | 1970 | 1.747355 | CGTCGTCCAGGGTATTGTAGT | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
1196 | 1971 | 2.019249 | TCGTCGTCCAGGGTATTGTAG | 58.981 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
1197 | 1972 | 1.745087 | GTCGTCGTCCAGGGTATTGTA | 59.255 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
1198 | 1973 | 0.529378 | GTCGTCGTCCAGGGTATTGT | 59.471 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1347 | 2125 | 1.520342 | GACTCGAGTGCCTGCATCC | 60.520 | 63.158 | 25.58 | 0.40 | 0.00 | 3.51 |
1348 | 2126 | 1.520342 | GGACTCGAGTGCCTGCATC | 60.520 | 63.158 | 25.58 | 5.36 | 0.00 | 3.91 |
1378 | 2330 | 2.033911 | TGCCGCTGCATTTGAGGA | 59.966 | 55.556 | 0.00 | 0.00 | 44.23 | 3.71 |
1435 | 2395 | 1.965930 | GGTCAGTCGCCATGCAACA | 60.966 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
1493 | 2459 | 2.833582 | CTCCTCCTTCCGCGGCTA | 60.834 | 66.667 | 23.51 | 10.22 | 0.00 | 3.93 |
1650 | 2628 | 3.376935 | CTGCTCGCCAGTTCCCGAT | 62.377 | 63.158 | 0.00 | 0.00 | 36.79 | 4.18 |
1659 | 2637 | 4.147449 | ATACGCTGCTGCTCGCCA | 62.147 | 61.111 | 14.03 | 4.23 | 38.05 | 5.69 |
1674 | 2652 | 0.035820 | GCCGTTGGTTCACCCTCATA | 60.036 | 55.000 | 0.00 | 0.00 | 34.29 | 2.15 |
1675 | 2653 | 1.303317 | GCCGTTGGTTCACCCTCAT | 60.303 | 57.895 | 0.00 | 0.00 | 34.29 | 2.90 |
1676 | 2654 | 2.112297 | GCCGTTGGTTCACCCTCA | 59.888 | 61.111 | 0.00 | 0.00 | 34.29 | 3.86 |
1734 | 2715 | 3.673484 | CACCAAACCAGGCCAGCG | 61.673 | 66.667 | 5.01 | 0.00 | 0.00 | 5.18 |
1785 | 2766 | 1.444553 | GCGAGTCGGGAGTTGACAG | 60.445 | 63.158 | 15.52 | 0.00 | 38.83 | 3.51 |
1813 | 2794 | 2.802667 | CGGATTGCTCGCGGACAAG | 61.803 | 63.158 | 17.35 | 4.70 | 0.00 | 3.16 |
1864 | 2845 | 1.810030 | CGTCCGCTGCCTAAAGTCC | 60.810 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
1972 | 2953 | 4.566004 | TCCTGTAGACAAATGAAGGAACG | 58.434 | 43.478 | 0.00 | 0.00 | 30.97 | 3.95 |
1980 | 2961 | 5.152623 | TCTGGTTCTCCTGTAGACAAATG | 57.847 | 43.478 | 0.00 | 0.00 | 32.51 | 2.32 |
1991 | 2972 | 2.769095 | GCTGTCCTTATCTGGTTCTCCT | 59.231 | 50.000 | 0.00 | 0.00 | 34.23 | 3.69 |
2030 | 3011 | 0.941542 | GTGTACAACGAGCTTTGGCA | 59.058 | 50.000 | 0.00 | 0.00 | 41.70 | 4.92 |
2058 | 3039 | 2.875317 | GAGCCAGAAAAATCGAGGATCC | 59.125 | 50.000 | 2.48 | 2.48 | 0.00 | 3.36 |
2106 | 3091 | 9.668497 | GTGACTTACTGAAATTAAATAGACCCT | 57.332 | 33.333 | 0.00 | 0.00 | 0.00 | 4.34 |
2107 | 3092 | 8.890718 | GGTGACTTACTGAAATTAAATAGACCC | 58.109 | 37.037 | 0.00 | 0.00 | 0.00 | 4.46 |
2108 | 3093 | 9.668497 | AGGTGACTTACTGAAATTAAATAGACC | 57.332 | 33.333 | 0.00 | 0.00 | 37.44 | 3.85 |
2144 | 3129 | 7.964604 | AGTTACTGATTTTAAGTCACCTGAC | 57.035 | 36.000 | 0.00 | 0.00 | 45.08 | 3.51 |
2155 | 3140 | 9.090692 | GGCGTGACTTATAAGTTACTGATTTTA | 57.909 | 33.333 | 27.98 | 0.00 | 41.71 | 1.52 |
2156 | 3141 | 7.201496 | CGGCGTGACTTATAAGTTACTGATTTT | 60.201 | 37.037 | 27.98 | 2.53 | 41.71 | 1.82 |
2157 | 3142 | 6.255020 | CGGCGTGACTTATAAGTTACTGATTT | 59.745 | 38.462 | 27.98 | 3.18 | 41.71 | 2.17 |
2158 | 3143 | 5.747197 | CGGCGTGACTTATAAGTTACTGATT | 59.253 | 40.000 | 27.98 | 3.81 | 41.71 | 2.57 |
2159 | 3144 | 5.279384 | CGGCGTGACTTATAAGTTACTGAT | 58.721 | 41.667 | 27.98 | 4.46 | 41.71 | 2.90 |
2160 | 3145 | 4.439153 | CCGGCGTGACTTATAAGTTACTGA | 60.439 | 45.833 | 27.98 | 8.02 | 41.71 | 3.41 |
2161 | 3146 | 3.795101 | CCGGCGTGACTTATAAGTTACTG | 59.205 | 47.826 | 27.98 | 23.08 | 41.71 | 2.74 |
2162 | 3147 | 3.445096 | ACCGGCGTGACTTATAAGTTACT | 59.555 | 43.478 | 27.98 | 13.50 | 41.71 | 2.24 |
2163 | 3148 | 3.774066 | ACCGGCGTGACTTATAAGTTAC | 58.226 | 45.455 | 23.81 | 23.81 | 40.82 | 2.50 |
2164 | 3149 | 4.454728 | AACCGGCGTGACTTATAAGTTA | 57.545 | 40.909 | 18.96 | 12.54 | 39.88 | 2.24 |
2165 | 3150 | 3.323751 | AACCGGCGTGACTTATAAGTT | 57.676 | 42.857 | 18.96 | 3.63 | 39.88 | 2.66 |
2166 | 3151 | 3.323751 | AAACCGGCGTGACTTATAAGT | 57.676 | 42.857 | 18.05 | 18.05 | 43.16 | 2.24 |
2167 | 3152 | 5.978934 | ATTAAACCGGCGTGACTTATAAG | 57.021 | 39.130 | 11.05 | 11.05 | 0.00 | 1.73 |
2168 | 3153 | 6.257630 | GGTAATTAAACCGGCGTGACTTATAA | 59.742 | 38.462 | 6.01 | 0.00 | 0.00 | 0.98 |
2169 | 3154 | 5.752955 | GGTAATTAAACCGGCGTGACTTATA | 59.247 | 40.000 | 6.01 | 0.00 | 0.00 | 0.98 |
2170 | 3155 | 4.571984 | GGTAATTAAACCGGCGTGACTTAT | 59.428 | 41.667 | 6.01 | 0.00 | 0.00 | 1.73 |
2171 | 3156 | 3.932089 | GGTAATTAAACCGGCGTGACTTA | 59.068 | 43.478 | 6.01 | 0.00 | 0.00 | 2.24 |
2172 | 3157 | 2.743664 | GGTAATTAAACCGGCGTGACTT | 59.256 | 45.455 | 6.01 | 0.00 | 0.00 | 3.01 |
2173 | 3158 | 2.289569 | TGGTAATTAAACCGGCGTGACT | 60.290 | 45.455 | 6.01 | 0.00 | 42.91 | 3.41 |
2174 | 3159 | 2.075338 | TGGTAATTAAACCGGCGTGAC | 58.925 | 47.619 | 6.01 | 0.00 | 42.91 | 3.67 |
2175 | 3160 | 2.075338 | GTGGTAATTAAACCGGCGTGA | 58.925 | 47.619 | 6.01 | 0.00 | 42.91 | 4.35 |
2176 | 3161 | 1.130938 | GGTGGTAATTAAACCGGCGTG | 59.869 | 52.381 | 6.01 | 0.00 | 42.91 | 5.34 |
2177 | 3162 | 1.271271 | TGGTGGTAATTAAACCGGCGT | 60.271 | 47.619 | 6.01 | 0.00 | 42.91 | 5.68 |
2178 | 3163 | 1.451067 | TGGTGGTAATTAAACCGGCG | 58.549 | 50.000 | 0.00 | 0.00 | 42.91 | 6.46 |
2179 | 3164 | 5.125900 | ACTTATTGGTGGTAATTAAACCGGC | 59.874 | 40.000 | 0.00 | 0.53 | 42.91 | 6.13 |
2180 | 3165 | 6.374894 | TGACTTATTGGTGGTAATTAAACCGG | 59.625 | 38.462 | 0.00 | 0.00 | 42.91 | 5.28 |
2181 | 3166 | 7.380431 | TGACTTATTGGTGGTAATTAAACCG | 57.620 | 36.000 | 11.93 | 3.02 | 42.91 | 4.44 |
2182 | 3167 | 9.185680 | AGATGACTTATTGGTGGTAATTAAACC | 57.814 | 33.333 | 10.42 | 10.42 | 40.19 | 3.27 |
2184 | 3169 | 9.967451 | TCAGATGACTTATTGGTGGTAATTAAA | 57.033 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
2185 | 3170 | 9.391006 | GTCAGATGACTTATTGGTGGTAATTAA | 57.609 | 33.333 | 5.72 | 0.00 | 41.65 | 1.40 |
2186 | 3171 | 7.990886 | GGTCAGATGACTTATTGGTGGTAATTA | 59.009 | 37.037 | 12.43 | 0.00 | 44.20 | 1.40 |
2187 | 3172 | 6.828785 | GGTCAGATGACTTATTGGTGGTAATT | 59.171 | 38.462 | 12.43 | 0.00 | 44.20 | 1.40 |
2188 | 3173 | 6.069673 | TGGTCAGATGACTTATTGGTGGTAAT | 60.070 | 38.462 | 12.43 | 0.00 | 44.20 | 1.89 |
2189 | 3174 | 5.249622 | TGGTCAGATGACTTATTGGTGGTAA | 59.750 | 40.000 | 12.43 | 0.00 | 44.20 | 2.85 |
2190 | 3175 | 4.780554 | TGGTCAGATGACTTATTGGTGGTA | 59.219 | 41.667 | 12.43 | 0.00 | 44.20 | 3.25 |
2191 | 3176 | 3.587061 | TGGTCAGATGACTTATTGGTGGT | 59.413 | 43.478 | 12.43 | 0.00 | 44.20 | 4.16 |
2192 | 3177 | 3.941483 | GTGGTCAGATGACTTATTGGTGG | 59.059 | 47.826 | 12.43 | 0.00 | 44.20 | 4.61 |
2193 | 3178 | 4.393062 | GTGTGGTCAGATGACTTATTGGTG | 59.607 | 45.833 | 12.43 | 0.00 | 44.20 | 4.17 |
2194 | 3179 | 4.565652 | GGTGTGGTCAGATGACTTATTGGT | 60.566 | 45.833 | 12.43 | 0.00 | 44.20 | 3.67 |
2195 | 3180 | 3.941483 | GGTGTGGTCAGATGACTTATTGG | 59.059 | 47.826 | 12.43 | 0.00 | 44.20 | 3.16 |
2196 | 3181 | 4.836825 | AGGTGTGGTCAGATGACTTATTG | 58.163 | 43.478 | 12.43 | 0.00 | 44.20 | 1.90 |
2197 | 3182 | 5.505181 | AAGGTGTGGTCAGATGACTTATT | 57.495 | 39.130 | 12.43 | 0.00 | 44.20 | 1.40 |
2198 | 3183 | 5.249393 | AGAAAGGTGTGGTCAGATGACTTAT | 59.751 | 40.000 | 12.43 | 0.00 | 44.20 | 1.73 |
2199 | 3184 | 4.593206 | AGAAAGGTGTGGTCAGATGACTTA | 59.407 | 41.667 | 12.43 | 0.40 | 44.20 | 2.24 |
2200 | 3185 | 3.392616 | AGAAAGGTGTGGTCAGATGACTT | 59.607 | 43.478 | 12.43 | 0.00 | 44.20 | 3.01 |
2201 | 3186 | 2.975489 | AGAAAGGTGTGGTCAGATGACT | 59.025 | 45.455 | 12.43 | 0.00 | 44.20 | 3.41 |
2202 | 3187 | 3.409026 | AGAAAGGTGTGGTCAGATGAC | 57.591 | 47.619 | 4.33 | 4.33 | 44.04 | 3.06 |
2203 | 3188 | 3.260884 | GGTAGAAAGGTGTGGTCAGATGA | 59.739 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
2204 | 3189 | 3.261897 | AGGTAGAAAGGTGTGGTCAGATG | 59.738 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2205 | 3190 | 3.521727 | AGGTAGAAAGGTGTGGTCAGAT | 58.478 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2206 | 3191 | 2.972348 | AGGTAGAAAGGTGTGGTCAGA | 58.028 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
2207 | 3192 | 3.181454 | ACAAGGTAGAAAGGTGTGGTCAG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2208 | 3193 | 2.775384 | ACAAGGTAGAAAGGTGTGGTCA | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2209 | 3194 | 3.487120 | ACAAGGTAGAAAGGTGTGGTC | 57.513 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
2210 | 3195 | 3.945640 | AACAAGGTAGAAAGGTGTGGT | 57.054 | 42.857 | 0.00 | 0.00 | 0.00 | 4.16 |
2211 | 3196 | 5.592104 | AAAAACAAGGTAGAAAGGTGTGG | 57.408 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
2231 | 3216 | 4.833938 | GGTCCCACCACCTTTACATAAAAA | 59.166 | 41.667 | 0.00 | 0.00 | 38.42 | 1.94 |
2232 | 3217 | 4.409187 | GGTCCCACCACCTTTACATAAAA | 58.591 | 43.478 | 0.00 | 0.00 | 38.42 | 1.52 |
2233 | 3218 | 3.245336 | GGGTCCCACCACCTTTACATAAA | 60.245 | 47.826 | 1.78 | 0.00 | 41.02 | 1.40 |
2234 | 3219 | 2.309458 | GGGTCCCACCACCTTTACATAA | 59.691 | 50.000 | 1.78 | 0.00 | 41.02 | 1.90 |
2235 | 3220 | 1.917568 | GGGTCCCACCACCTTTACATA | 59.082 | 52.381 | 1.78 | 0.00 | 41.02 | 2.29 |
2236 | 3221 | 0.702316 | GGGTCCCACCACCTTTACAT | 59.298 | 55.000 | 1.78 | 0.00 | 41.02 | 2.29 |
2237 | 3222 | 0.698198 | TGGGTCCCACCACCTTTACA | 60.698 | 55.000 | 6.47 | 0.00 | 41.02 | 2.41 |
2238 | 3223 | 0.702316 | ATGGGTCCCACCACCTTTAC | 59.298 | 55.000 | 14.57 | 0.00 | 44.72 | 2.01 |
2239 | 3224 | 0.701731 | CATGGGTCCCACCACCTTTA | 59.298 | 55.000 | 14.57 | 0.00 | 44.72 | 1.85 |
2240 | 3225 | 1.464722 | CATGGGTCCCACCACCTTT | 59.535 | 57.895 | 14.57 | 0.00 | 44.72 | 3.11 |
2241 | 3226 | 3.180282 | CATGGGTCCCACCACCTT | 58.820 | 61.111 | 14.57 | 0.00 | 44.72 | 3.50 |
2242 | 3227 | 3.661648 | GCATGGGTCCCACCACCT | 61.662 | 66.667 | 14.57 | 0.00 | 44.72 | 4.00 |
2243 | 3228 | 3.521765 | TTGCATGGGTCCCACCACC | 62.522 | 63.158 | 14.57 | 2.26 | 44.72 | 4.61 |
2244 | 3229 | 1.118356 | TTTTGCATGGGTCCCACCAC | 61.118 | 55.000 | 14.57 | 6.21 | 44.72 | 4.16 |
2245 | 3230 | 0.831288 | CTTTTGCATGGGTCCCACCA | 60.831 | 55.000 | 14.57 | 11.02 | 46.24 | 4.17 |
2246 | 3231 | 1.543944 | CCTTTTGCATGGGTCCCACC | 61.544 | 60.000 | 14.57 | 8.17 | 35.80 | 4.61 |
2247 | 3232 | 1.543944 | CCCTTTTGCATGGGTCCCAC | 61.544 | 60.000 | 14.57 | 1.42 | 35.80 | 4.61 |
2248 | 3233 | 1.229145 | CCCTTTTGCATGGGTCCCA | 60.229 | 57.895 | 14.64 | 14.64 | 38.65 | 4.37 |
2249 | 3234 | 1.989508 | CCCCTTTTGCATGGGTCCC | 60.990 | 63.158 | 15.82 | 0.00 | 41.82 | 4.46 |
2250 | 3235 | 3.712287 | CCCCTTTTGCATGGGTCC | 58.288 | 61.111 | 15.82 | 0.00 | 41.82 | 4.46 |
2253 | 3238 | 0.542702 | AGTCACCCCTTTTGCATGGG | 60.543 | 55.000 | 11.68 | 11.68 | 45.34 | 4.00 |
2254 | 3239 | 1.341080 | AAGTCACCCCTTTTGCATGG | 58.659 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2255 | 3240 | 5.418840 | ACTTATAAGTCACCCCTTTTGCATG | 59.581 | 40.000 | 12.50 | 0.00 | 32.86 | 4.06 |
2256 | 3241 | 5.580022 | ACTTATAAGTCACCCCTTTTGCAT | 58.420 | 37.500 | 12.50 | 0.00 | 32.86 | 3.96 |
2257 | 3242 | 4.993028 | ACTTATAAGTCACCCCTTTTGCA | 58.007 | 39.130 | 12.50 | 0.00 | 32.86 | 4.08 |
2258 | 3243 | 5.977489 | AACTTATAAGTCACCCCTTTTGC | 57.023 | 39.130 | 18.28 | 0.00 | 38.57 | 3.68 |
2259 | 3244 | 9.908152 | CTTAAAACTTATAAGTCACCCCTTTTG | 57.092 | 33.333 | 18.28 | 7.29 | 38.57 | 2.44 |
2260 | 3245 | 9.650714 | ACTTAAAACTTATAAGTCACCCCTTTT | 57.349 | 29.630 | 18.28 | 14.40 | 38.85 | 2.27 |
2261 | 3246 | 9.650714 | AACTTAAAACTTATAAGTCACCCCTTT | 57.349 | 29.630 | 18.28 | 15.02 | 41.49 | 3.11 |
2262 | 3247 | 9.074576 | CAACTTAAAACTTATAAGTCACCCCTT | 57.925 | 33.333 | 18.28 | 5.47 | 41.49 | 3.95 |
2263 | 3248 | 7.668469 | CCAACTTAAAACTTATAAGTCACCCCT | 59.332 | 37.037 | 18.28 | 0.00 | 41.49 | 4.79 |
2264 | 3249 | 7.666804 | TCCAACTTAAAACTTATAAGTCACCCC | 59.333 | 37.037 | 18.28 | 0.00 | 41.49 | 4.95 |
2265 | 3250 | 8.625786 | TCCAACTTAAAACTTATAAGTCACCC | 57.374 | 34.615 | 18.28 | 0.00 | 41.49 | 4.61 |
2266 | 3251 | 9.281371 | ACTCCAACTTAAAACTTATAAGTCACC | 57.719 | 33.333 | 18.28 | 0.00 | 41.49 | 4.02 |
2268 | 3253 | 9.280174 | CCACTCCAACTTAAAACTTATAAGTCA | 57.720 | 33.333 | 18.28 | 4.72 | 41.49 | 3.41 |
2269 | 3254 | 9.498176 | TCCACTCCAACTTAAAACTTATAAGTC | 57.502 | 33.333 | 18.28 | 0.00 | 41.49 | 3.01 |
2270 | 3255 | 9.503399 | CTCCACTCCAACTTAAAACTTATAAGT | 57.497 | 33.333 | 12.50 | 12.50 | 43.57 | 2.24 |
2271 | 3256 | 8.451748 | GCTCCACTCCAACTTAAAACTTATAAG | 58.548 | 37.037 | 11.05 | 11.05 | 36.62 | 1.73 |
2272 | 3257 | 7.940137 | TGCTCCACTCCAACTTAAAACTTATAA | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2273 | 3258 | 7.455058 | TGCTCCACTCCAACTTAAAACTTATA | 58.545 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
2274 | 3259 | 6.303839 | TGCTCCACTCCAACTTAAAACTTAT | 58.696 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2275 | 3260 | 5.686753 | TGCTCCACTCCAACTTAAAACTTA | 58.313 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
2276 | 3261 | 4.532834 | TGCTCCACTCCAACTTAAAACTT | 58.467 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
2277 | 3262 | 4.164843 | TGCTCCACTCCAACTTAAAACT | 57.835 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
2278 | 3263 | 4.338400 | AGTTGCTCCACTCCAACTTAAAAC | 59.662 | 41.667 | 0.56 | 0.00 | 46.86 | 2.43 |
2279 | 3264 | 4.532834 | AGTTGCTCCACTCCAACTTAAAA | 58.467 | 39.130 | 0.56 | 0.00 | 46.86 | 1.52 |
2280 | 3265 | 4.164843 | AGTTGCTCCACTCCAACTTAAA | 57.835 | 40.909 | 0.56 | 0.00 | 46.86 | 1.52 |
2281 | 3266 | 3.857157 | AGTTGCTCCACTCCAACTTAA | 57.143 | 42.857 | 0.56 | 0.00 | 46.86 | 1.85 |
2285 | 3270 | 3.437049 | GTCATAAGTTGCTCCACTCCAAC | 59.563 | 47.826 | 0.00 | 0.00 | 41.13 | 3.77 |
2286 | 3271 | 3.327757 | AGTCATAAGTTGCTCCACTCCAA | 59.672 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
2287 | 3272 | 2.906389 | AGTCATAAGTTGCTCCACTCCA | 59.094 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2288 | 3273 | 3.618690 | AGTCATAAGTTGCTCCACTCC | 57.381 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2289 | 3274 | 8.359060 | CTTATAAGTCATAAGTTGCTCCACTC | 57.641 | 38.462 | 4.18 | 0.00 | 40.84 | 3.51 |
2310 | 3295 | 9.275572 | TCCAACTTATAAGTCACCCTAACTTAT | 57.724 | 33.333 | 18.28 | 11.86 | 46.48 | 1.73 |
2311 | 3296 | 8.669055 | TCCAACTTATAAGTCACCCTAACTTA | 57.331 | 34.615 | 18.28 | 0.00 | 41.91 | 2.24 |
2312 | 3297 | 7.563724 | TCCAACTTATAAGTCACCCTAACTT | 57.436 | 36.000 | 18.28 | 0.00 | 38.57 | 2.66 |
2313 | 3298 | 7.147532 | GGATCCAACTTATAAGTCACCCTAACT | 60.148 | 40.741 | 18.28 | 0.00 | 38.57 | 2.24 |
2314 | 3299 | 6.990939 | GGATCCAACTTATAAGTCACCCTAAC | 59.009 | 42.308 | 18.28 | 6.14 | 38.57 | 2.34 |
2315 | 3300 | 6.183360 | CGGATCCAACTTATAAGTCACCCTAA | 60.183 | 42.308 | 18.28 | 1.76 | 38.57 | 2.69 |
2316 | 3301 | 5.303589 | CGGATCCAACTTATAAGTCACCCTA | 59.696 | 44.000 | 18.28 | 2.70 | 38.57 | 3.53 |
2317 | 3302 | 4.101119 | CGGATCCAACTTATAAGTCACCCT | 59.899 | 45.833 | 18.28 | 0.00 | 38.57 | 4.34 |
2318 | 3303 | 4.141779 | ACGGATCCAACTTATAAGTCACCC | 60.142 | 45.833 | 18.28 | 13.30 | 38.57 | 4.61 |
2319 | 3304 | 5.019785 | ACGGATCCAACTTATAAGTCACC | 57.980 | 43.478 | 18.28 | 14.59 | 38.57 | 4.02 |
2320 | 3305 | 6.592607 | TCAAACGGATCCAACTTATAAGTCAC | 59.407 | 38.462 | 18.28 | 8.29 | 38.57 | 3.67 |
2321 | 3306 | 6.592607 | GTCAAACGGATCCAACTTATAAGTCA | 59.407 | 38.462 | 18.28 | 6.48 | 38.57 | 3.41 |
2322 | 3307 | 6.592607 | TGTCAAACGGATCCAACTTATAAGTC | 59.407 | 38.462 | 18.28 | 5.73 | 38.57 | 3.01 |
2323 | 3308 | 6.469410 | TGTCAAACGGATCCAACTTATAAGT | 58.531 | 36.000 | 12.50 | 12.50 | 42.04 | 2.24 |
2324 | 3309 | 6.978343 | TGTCAAACGGATCCAACTTATAAG | 57.022 | 37.500 | 13.41 | 11.05 | 0.00 | 1.73 |
2325 | 3310 | 7.747155 | TTTGTCAAACGGATCCAACTTATAA | 57.253 | 32.000 | 13.41 | 0.00 | 0.00 | 0.98 |
2326 | 3311 | 7.747155 | TTTTGTCAAACGGATCCAACTTATA | 57.253 | 32.000 | 13.41 | 0.00 | 0.00 | 0.98 |
2327 | 3312 | 6.642707 | TTTTGTCAAACGGATCCAACTTAT | 57.357 | 33.333 | 13.41 | 0.00 | 0.00 | 1.73 |
2328 | 3313 | 6.642707 | ATTTTGTCAAACGGATCCAACTTA | 57.357 | 33.333 | 13.41 | 0.00 | 0.00 | 2.24 |
2329 | 3314 | 4.993029 | TTTTGTCAAACGGATCCAACTT | 57.007 | 36.364 | 13.41 | 0.00 | 0.00 | 2.66 |
2330 | 3315 | 6.264518 | ACTTATTTTGTCAAACGGATCCAACT | 59.735 | 34.615 | 13.41 | 0.00 | 0.00 | 3.16 |
2331 | 3316 | 6.443792 | ACTTATTTTGTCAAACGGATCCAAC | 58.556 | 36.000 | 13.41 | 2.12 | 0.00 | 3.77 |
2332 | 3317 | 6.263392 | TGACTTATTTTGTCAAACGGATCCAA | 59.737 | 34.615 | 13.41 | 0.00 | 40.89 | 3.53 |
2333 | 3318 | 5.765677 | TGACTTATTTTGTCAAACGGATCCA | 59.234 | 36.000 | 13.41 | 0.00 | 40.89 | 3.41 |
2334 | 3319 | 6.072673 | AGTGACTTATTTTGTCAAACGGATCC | 60.073 | 38.462 | 0.00 | 0.00 | 44.63 | 3.36 |
2335 | 3320 | 6.899114 | AGTGACTTATTTTGTCAAACGGATC | 58.101 | 36.000 | 0.00 | 0.00 | 44.63 | 3.36 |
2336 | 3321 | 6.877611 | AGTGACTTATTTTGTCAAACGGAT | 57.122 | 33.333 | 0.00 | 0.00 | 44.63 | 4.18 |
2337 | 3322 | 6.687081 | AAGTGACTTATTTTGTCAAACGGA | 57.313 | 33.333 | 0.00 | 0.00 | 44.63 | 4.69 |
2338 | 3323 | 7.749539 | AAAAGTGACTTATTTTGTCAAACGG | 57.250 | 32.000 | 0.00 | 0.00 | 44.63 | 4.44 |
2339 | 3324 | 7.630606 | GCAAAAAGTGACTTATTTTGTCAAACG | 59.369 | 33.333 | 18.40 | 0.00 | 44.63 | 3.60 |
2340 | 3325 | 8.439286 | TGCAAAAAGTGACTTATTTTGTCAAAC | 58.561 | 29.630 | 18.40 | 7.02 | 44.63 | 2.93 |
2341 | 3326 | 8.439286 | GTGCAAAAAGTGACTTATTTTGTCAAA | 58.561 | 29.630 | 18.40 | 0.00 | 44.63 | 2.69 |
2342 | 3327 | 7.816995 | AGTGCAAAAAGTGACTTATTTTGTCAA | 59.183 | 29.630 | 18.40 | 7.17 | 44.63 | 3.18 |
2343 | 3328 | 7.319646 | AGTGCAAAAAGTGACTTATTTTGTCA | 58.680 | 30.769 | 18.40 | 14.83 | 42.89 | 3.58 |
2344 | 3329 | 7.755582 | AGTGCAAAAAGTGACTTATTTTGTC | 57.244 | 32.000 | 18.40 | 13.16 | 42.89 | 3.18 |
2345 | 3330 | 8.546597 | AAAGTGCAAAAAGTGACTTATTTTGT | 57.453 | 26.923 | 18.40 | 2.76 | 42.89 | 2.83 |
2346 | 3331 | 9.476761 | GAAAAGTGCAAAAAGTGACTTATTTTG | 57.523 | 29.630 | 14.87 | 14.87 | 43.47 | 2.44 |
2347 | 3332 | 8.379902 | CGAAAAGTGCAAAAAGTGACTTATTTT | 58.620 | 29.630 | 0.00 | 0.00 | 31.47 | 1.82 |
2348 | 3333 | 7.757624 | TCGAAAAGTGCAAAAAGTGACTTATTT | 59.242 | 29.630 | 0.00 | 0.00 | 31.47 | 1.40 |
2349 | 3334 | 7.220108 | GTCGAAAAGTGCAAAAAGTGACTTATT | 59.780 | 33.333 | 0.00 | 0.00 | 31.47 | 1.40 |
2350 | 3335 | 6.691388 | GTCGAAAAGTGCAAAAAGTGACTTAT | 59.309 | 34.615 | 0.00 | 0.00 | 31.47 | 1.73 |
2351 | 3336 | 6.025280 | GTCGAAAAGTGCAAAAAGTGACTTA | 58.975 | 36.000 | 0.00 | 0.00 | 31.47 | 2.24 |
2352 | 3337 | 4.857037 | GTCGAAAAGTGCAAAAAGTGACTT | 59.143 | 37.500 | 0.00 | 0.00 | 32.40 | 3.01 |
2353 | 3338 | 4.156008 | AGTCGAAAAGTGCAAAAAGTGACT | 59.844 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
2354 | 3339 | 4.412207 | AGTCGAAAAGTGCAAAAAGTGAC | 58.588 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
2355 | 3340 | 4.695217 | AGTCGAAAAGTGCAAAAAGTGA | 57.305 | 36.364 | 0.00 | 0.00 | 0.00 | 3.41 |
2356 | 3341 | 8.555166 | TTATAAGTCGAAAAGTGCAAAAAGTG | 57.445 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
2357 | 3342 | 8.403236 | ACTTATAAGTCGAAAAGTGCAAAAAGT | 58.597 | 29.630 | 12.50 | 0.00 | 32.86 | 2.66 |
2358 | 3343 | 8.782533 | ACTTATAAGTCGAAAAGTGCAAAAAG | 57.217 | 30.769 | 12.50 | 0.00 | 32.86 | 2.27 |
2359 | 3344 | 9.015577 | CAACTTATAAGTCGAAAAGTGCAAAAA | 57.984 | 29.630 | 18.28 | 0.00 | 38.57 | 1.94 |
2360 | 3345 | 7.646130 | CCAACTTATAAGTCGAAAAGTGCAAAA | 59.354 | 33.333 | 18.28 | 0.00 | 38.57 | 2.44 |
2361 | 3346 | 7.136119 | CCAACTTATAAGTCGAAAAGTGCAAA | 58.864 | 34.615 | 18.28 | 0.00 | 38.57 | 3.68 |
2362 | 3347 | 6.261381 | ACCAACTTATAAGTCGAAAAGTGCAA | 59.739 | 34.615 | 18.28 | 0.00 | 38.57 | 4.08 |
2363 | 3348 | 5.761234 | ACCAACTTATAAGTCGAAAAGTGCA | 59.239 | 36.000 | 18.28 | 0.00 | 38.57 | 4.57 |
2364 | 3349 | 6.073440 | TCACCAACTTATAAGTCGAAAAGTGC | 60.073 | 38.462 | 18.28 | 0.00 | 38.57 | 4.40 |
2365 | 3350 | 7.170998 | AGTCACCAACTTATAAGTCGAAAAGTG | 59.829 | 37.037 | 18.28 | 16.78 | 38.57 | 3.16 |
2366 | 3351 | 7.215085 | AGTCACCAACTTATAAGTCGAAAAGT | 58.785 | 34.615 | 18.28 | 7.29 | 38.57 | 2.66 |
2367 | 3352 | 7.653767 | AGTCACCAACTTATAAGTCGAAAAG | 57.346 | 36.000 | 18.28 | 7.33 | 38.57 | 2.27 |
2380 | 3365 | 7.547722 | GTTTGGTTTCAAATAAGTCACCAACTT | 59.452 | 33.333 | 1.03 | 0.00 | 42.59 | 2.66 |
2381 | 3366 | 6.783708 | TTGGTTTCAAATAAGTCACCAACT | 57.216 | 33.333 | 0.00 | 0.00 | 38.97 | 3.16 |
2382 | 3367 | 6.814146 | TGTTTGGTTTCAAATAAGTCACCAAC | 59.186 | 34.615 | 1.03 | 0.00 | 42.59 | 3.77 |
2383 | 3368 | 6.936279 | TGTTTGGTTTCAAATAAGTCACCAA | 58.064 | 32.000 | 0.00 | 0.00 | 43.73 | 3.67 |
2384 | 3369 | 6.406400 | CCTGTTTGGTTTCAAATAAGTCACCA | 60.406 | 38.462 | 0.00 | 0.00 | 43.73 | 4.17 |
2385 | 3370 | 5.983118 | CCTGTTTGGTTTCAAATAAGTCACC | 59.017 | 40.000 | 0.00 | 0.00 | 43.73 | 4.02 |
2386 | 3371 | 5.983118 | CCCTGTTTGGTTTCAAATAAGTCAC | 59.017 | 40.000 | 0.00 | 0.00 | 43.73 | 3.67 |
2387 | 3372 | 5.452636 | GCCCTGTTTGGTTTCAAATAAGTCA | 60.453 | 40.000 | 0.00 | 0.00 | 43.73 | 3.41 |
2388 | 3373 | 4.988540 | GCCCTGTTTGGTTTCAAATAAGTC | 59.011 | 41.667 | 0.00 | 0.00 | 43.73 | 3.01 |
2389 | 3374 | 4.202315 | GGCCCTGTTTGGTTTCAAATAAGT | 60.202 | 41.667 | 0.00 | 0.00 | 43.73 | 2.24 |
2390 | 3375 | 4.040339 | AGGCCCTGTTTGGTTTCAAATAAG | 59.960 | 41.667 | 0.00 | 0.00 | 43.73 | 1.73 |
2391 | 3376 | 3.970640 | AGGCCCTGTTTGGTTTCAAATAA | 59.029 | 39.130 | 0.00 | 0.00 | 43.73 | 1.40 |
2392 | 3377 | 3.582164 | AGGCCCTGTTTGGTTTCAAATA | 58.418 | 40.909 | 0.00 | 0.00 | 43.73 | 1.40 |
2393 | 3378 | 2.407562 | AGGCCCTGTTTGGTTTCAAAT | 58.592 | 42.857 | 0.00 | 0.00 | 43.73 | 2.32 |
2394 | 3379 | 1.872773 | AGGCCCTGTTTGGTTTCAAA | 58.127 | 45.000 | 0.00 | 0.00 | 40.23 | 2.69 |
2395 | 3380 | 1.872773 | AAGGCCCTGTTTGGTTTCAA | 58.127 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2396 | 3381 | 2.696187 | GTTAAGGCCCTGTTTGGTTTCA | 59.304 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2397 | 3382 | 2.036733 | GGTTAAGGCCCTGTTTGGTTTC | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
2398 | 3383 | 2.043992 | GGTTAAGGCCCTGTTTGGTTT | 58.956 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
2399 | 3384 | 1.219469 | AGGTTAAGGCCCTGTTTGGTT | 59.781 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
2400 | 3385 | 0.857675 | AGGTTAAGGCCCTGTTTGGT | 59.142 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2401 | 3386 | 2.009681 | AAGGTTAAGGCCCTGTTTGG | 57.990 | 50.000 | 0.00 | 0.00 | 30.99 | 3.28 |
2402 | 3387 | 3.492337 | TGTAAGGTTAAGGCCCTGTTTG | 58.508 | 45.455 | 0.00 | 0.00 | 30.99 | 2.93 |
2403 | 3388 | 3.887916 | TGTAAGGTTAAGGCCCTGTTT | 57.112 | 42.857 | 0.00 | 0.00 | 30.99 | 2.83 |
2404 | 3389 | 3.887916 | TTGTAAGGTTAAGGCCCTGTT | 57.112 | 42.857 | 0.00 | 0.00 | 30.99 | 3.16 |
2405 | 3390 | 3.117436 | TGTTTGTAAGGTTAAGGCCCTGT | 60.117 | 43.478 | 0.00 | 0.00 | 30.99 | 4.00 |
2406 | 3391 | 3.492337 | TGTTTGTAAGGTTAAGGCCCTG | 58.508 | 45.455 | 0.00 | 0.00 | 30.99 | 4.45 |
2407 | 3392 | 3.887916 | TGTTTGTAAGGTTAAGGCCCT | 57.112 | 42.857 | 0.00 | 0.00 | 0.00 | 5.19 |
2408 | 3393 | 3.368013 | GCATGTTTGTAAGGTTAAGGCCC | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
2409 | 3394 | 3.368013 | GGCATGTTTGTAAGGTTAAGGCC | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
2410 | 3395 | 3.257127 | TGGCATGTTTGTAAGGTTAAGGC | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
2411 | 3396 | 4.614993 | CGTGGCATGTTTGTAAGGTTAAGG | 60.615 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
2412 | 3397 | 4.472286 | CGTGGCATGTTTGTAAGGTTAAG | 58.528 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2413 | 3398 | 3.304794 | GCGTGGCATGTTTGTAAGGTTAA | 60.305 | 43.478 | 8.75 | 0.00 | 0.00 | 2.01 |
2414 | 3399 | 2.226912 | GCGTGGCATGTTTGTAAGGTTA | 59.773 | 45.455 | 8.75 | 0.00 | 0.00 | 2.85 |
2415 | 3400 | 1.000717 | GCGTGGCATGTTTGTAAGGTT | 60.001 | 47.619 | 8.75 | 0.00 | 0.00 | 3.50 |
2416 | 3401 | 0.596082 | GCGTGGCATGTTTGTAAGGT | 59.404 | 50.000 | 8.75 | 0.00 | 0.00 | 3.50 |
2417 | 3402 | 0.595588 | TGCGTGGCATGTTTGTAAGG | 59.404 | 50.000 | 8.75 | 0.00 | 31.71 | 2.69 |
2418 | 3403 | 1.685302 | GTGCGTGGCATGTTTGTAAG | 58.315 | 50.000 | 8.75 | 0.00 | 41.91 | 2.34 |
2419 | 3404 | 0.040870 | CGTGCGTGGCATGTTTGTAA | 60.041 | 50.000 | 8.75 | 0.00 | 41.91 | 2.41 |
2420 | 3405 | 1.571953 | CGTGCGTGGCATGTTTGTA | 59.428 | 52.632 | 8.75 | 0.00 | 41.91 | 2.41 |
2421 | 3406 | 2.331098 | CGTGCGTGGCATGTTTGT | 59.669 | 55.556 | 8.75 | 0.00 | 41.91 | 2.83 |
2422 | 3407 | 3.098958 | GCGTGCGTGGCATGTTTG | 61.099 | 61.111 | 8.75 | 0.00 | 46.10 | 2.93 |
2423 | 3408 | 2.844451 | AAGCGTGCGTGGCATGTTT | 61.844 | 52.632 | 8.75 | 8.60 | 46.10 | 2.83 |
2424 | 3409 | 3.254014 | GAAGCGTGCGTGGCATGTT | 62.254 | 57.895 | 8.75 | 2.68 | 46.10 | 2.71 |
2425 | 3410 | 3.726517 | GAAGCGTGCGTGGCATGT | 61.727 | 61.111 | 8.75 | 0.00 | 46.10 | 3.21 |
2426 | 3411 | 4.465512 | GGAAGCGTGCGTGGCATG | 62.466 | 66.667 | 1.31 | 1.31 | 46.98 | 4.06 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.