Multiple sequence alignment - TraesCS2A01G389400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G389400 chr2A 100.000 3196 0 0 1 3196 637983504 637986699 0.000000e+00 5903.0
1 TraesCS2A01G389400 chr2D 87.858 2726 151 64 176 2840 492675555 492678161 0.000000e+00 3035.0
2 TraesCS2A01G389400 chr2B 88.358 1778 95 50 176 1920 578604314 578606012 0.000000e+00 2034.0
3 TraesCS2A01G389400 chr2B 80.915 634 84 21 2394 3010 578607031 578607644 1.740000e-127 466.0
4 TraesCS2A01G389400 chr2B 90.640 203 19 0 2168 2370 578606649 578606851 1.460000e-68 270.0
5 TraesCS2A01G389400 chr2B 86.853 251 13 6 1935 2169 578606112 578606358 2.440000e-66 263.0
6 TraesCS2A01G389400 chr6A 88.514 296 31 3 1179 1474 451660052 451660344 3.920000e-94 355.0
7 TraesCS2A01G389400 chr6D 89.531 277 29 0 1198 1474 314056259 314056535 5.070000e-93 351.0
8 TraesCS2A01G389400 chr6B 89.531 277 29 0 1198 1474 512448211 512447935 5.070000e-93 351.0
9 TraesCS2A01G389400 chr5B 83.043 230 32 5 1202 1429 501464953 501464729 5.410000e-48 202.0
10 TraesCS2A01G389400 chr5A 82.969 229 32 5 1203 1429 527905747 527905524 1.940000e-47 200.0
11 TraesCS2A01G389400 chr5D 82.684 231 31 7 1202 1429 415273199 415272975 2.520000e-46 196.0
12 TraesCS2A01G389400 chr4D 80.392 153 26 4 1267 1417 457075167 457075317 2.610000e-21 113.0
13 TraesCS2A01G389400 chr7A 85.000 60 5 3 1008 1066 231544716 231544772 1.240000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G389400 chr2A 637983504 637986699 3195 False 5903.00 5903 100.0000 1 3196 1 chr2A.!!$F1 3195
1 TraesCS2A01G389400 chr2D 492675555 492678161 2606 False 3035.00 3035 87.8580 176 2840 1 chr2D.!!$F1 2664
2 TraesCS2A01G389400 chr2B 578604314 578607644 3330 False 758.25 2034 86.6915 176 3010 4 chr2B.!!$F1 2834

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.475632 TGGTGATGTCCCTTCCTGGT 60.476 55.0 0.0 0.0 0.0 4.00 F
1024 1053 0.037590 TTACCACCACCATCACCAGC 59.962 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1107 1151 0.037877 CCATCTCCATGCCCATCTCC 59.962 60.0 0.0 0.0 0.0 3.71 R
2943 3589 0.036875 CAAAGGCGGAAGGAGGAAGT 59.963 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 1.673767 ACATGGTGATGTCCCTTCCT 58.326 50.000 0.00 0.00 38.53 3.36
57 58 1.283029 ACATGGTGATGTCCCTTCCTG 59.717 52.381 0.00 0.00 38.53 3.86
58 59 0.921896 ATGGTGATGTCCCTTCCTGG 59.078 55.000 0.00 0.00 0.00 4.45
59 60 0.475632 TGGTGATGTCCCTTCCTGGT 60.476 55.000 0.00 0.00 0.00 4.00
60 61 1.203376 TGGTGATGTCCCTTCCTGGTA 60.203 52.381 0.00 0.00 0.00 3.25
61 62 1.913419 GGTGATGTCCCTTCCTGGTAA 59.087 52.381 0.00 0.00 0.00 2.85
62 63 2.307686 GGTGATGTCCCTTCCTGGTAAA 59.692 50.000 0.00 0.00 0.00 2.01
63 64 3.344515 GTGATGTCCCTTCCTGGTAAAC 58.655 50.000 0.00 0.00 0.00 2.01
64 65 2.027561 TGATGTCCCTTCCTGGTAAACG 60.028 50.000 0.00 0.00 0.00 3.60
65 66 1.719529 TGTCCCTTCCTGGTAAACGA 58.280 50.000 0.00 0.00 0.00 3.85
66 67 2.262637 TGTCCCTTCCTGGTAAACGAT 58.737 47.619 0.00 0.00 0.00 3.73
67 68 2.235402 TGTCCCTTCCTGGTAAACGATC 59.765 50.000 0.00 0.00 0.00 3.69
68 69 2.235402 GTCCCTTCCTGGTAAACGATCA 59.765 50.000 0.00 0.00 0.00 2.92
69 70 2.907696 TCCCTTCCTGGTAAACGATCAA 59.092 45.455 0.00 0.00 0.00 2.57
70 71 3.521937 TCCCTTCCTGGTAAACGATCAAT 59.478 43.478 0.00 0.00 0.00 2.57
71 72 3.877508 CCCTTCCTGGTAAACGATCAATC 59.122 47.826 0.00 0.00 0.00 2.67
86 87 3.328382 TCAATCGAGTGGTAAACTGGG 57.672 47.619 13.59 0.00 40.07 4.45
87 88 2.901192 TCAATCGAGTGGTAAACTGGGA 59.099 45.455 13.59 0.00 40.07 4.37
88 89 3.056107 TCAATCGAGTGGTAAACTGGGAG 60.056 47.826 13.59 0.00 40.07 4.30
89 90 2.005370 TCGAGTGGTAAACTGGGAGT 57.995 50.000 0.00 0.00 40.07 3.85
90 91 3.159213 TCGAGTGGTAAACTGGGAGTA 57.841 47.619 0.00 0.00 40.07 2.59
91 92 3.087031 TCGAGTGGTAAACTGGGAGTAG 58.913 50.000 0.00 0.00 40.07 2.57
92 93 2.824341 CGAGTGGTAAACTGGGAGTAGT 59.176 50.000 0.00 0.00 40.07 2.73
93 94 4.012374 CGAGTGGTAAACTGGGAGTAGTA 58.988 47.826 0.00 0.00 40.07 1.82
94 95 4.096081 CGAGTGGTAAACTGGGAGTAGTAG 59.904 50.000 0.00 0.00 40.07 2.57
95 96 5.008165 AGTGGTAAACTGGGAGTAGTAGT 57.992 43.478 0.00 0.00 37.88 2.73
96 97 6.144845 AGTGGTAAACTGGGAGTAGTAGTA 57.855 41.667 0.00 0.00 37.88 1.82
97 98 6.186234 AGTGGTAAACTGGGAGTAGTAGTAG 58.814 44.000 0.00 0.00 37.88 2.57
98 99 6.012157 AGTGGTAAACTGGGAGTAGTAGTAGA 60.012 42.308 0.00 0.00 37.88 2.59
99 100 6.660949 GTGGTAAACTGGGAGTAGTAGTAGAA 59.339 42.308 0.00 0.00 0.00 2.10
100 101 6.660949 TGGTAAACTGGGAGTAGTAGTAGAAC 59.339 42.308 0.00 0.00 0.00 3.01
101 102 5.893897 AAACTGGGAGTAGTAGTAGAACG 57.106 43.478 0.00 0.00 0.00 3.95
102 103 3.277715 ACTGGGAGTAGTAGTAGAACGC 58.722 50.000 0.00 0.00 0.00 4.84
103 104 3.276857 CTGGGAGTAGTAGTAGAACGCA 58.723 50.000 0.00 0.00 0.00 5.24
104 105 3.012518 TGGGAGTAGTAGTAGAACGCAC 58.987 50.000 0.00 0.00 0.00 5.34
105 106 3.012518 GGGAGTAGTAGTAGAACGCACA 58.987 50.000 0.00 0.00 0.00 4.57
106 107 3.065095 GGGAGTAGTAGTAGAACGCACAG 59.935 52.174 0.00 0.00 0.00 3.66
107 108 3.937706 GGAGTAGTAGTAGAACGCACAGA 59.062 47.826 0.00 0.00 0.00 3.41
108 109 4.034279 GGAGTAGTAGTAGAACGCACAGAG 59.966 50.000 0.00 0.00 0.00 3.35
109 110 3.940221 AGTAGTAGTAGAACGCACAGAGG 59.060 47.826 0.00 0.00 0.00 3.69
110 111 1.473278 AGTAGTAGAACGCACAGAGGC 59.527 52.381 0.00 0.00 0.00 4.70
129 130 4.680237 CCAGGCGACAACAGGCGA 62.680 66.667 0.00 0.00 39.33 5.54
130 131 3.414700 CAGGCGACAACAGGCGAC 61.415 66.667 0.00 0.00 39.33 5.19
131 132 3.923864 AGGCGACAACAGGCGACA 61.924 61.111 0.00 0.00 38.18 4.35
132 133 2.970324 GGCGACAACAGGCGACAA 60.970 61.111 0.00 0.00 35.15 3.18
133 134 2.551270 GCGACAACAGGCGACAAG 59.449 61.111 0.00 0.00 0.00 3.16
134 135 1.954146 GCGACAACAGGCGACAAGA 60.954 57.895 0.00 0.00 0.00 3.02
135 136 1.853319 CGACAACAGGCGACAAGAC 59.147 57.895 0.00 0.00 0.00 3.01
136 137 1.557443 CGACAACAGGCGACAAGACC 61.557 60.000 0.00 0.00 0.00 3.85
137 138 1.227853 ACAACAGGCGACAAGACCC 60.228 57.895 0.00 0.00 0.00 4.46
138 139 2.030562 AACAGGCGACAAGACCCG 59.969 61.111 0.00 0.00 0.00 5.28
143 144 3.723348 GCGACAAGACCCGCCAAC 61.723 66.667 0.00 0.00 45.06 3.77
144 145 3.411351 CGACAAGACCCGCCAACG 61.411 66.667 0.00 0.00 39.67 4.10
145 146 3.723348 GACAAGACCCGCCAACGC 61.723 66.667 0.00 0.00 38.22 4.84
155 156 3.558411 GCCAACGCGCTAGCTGAG 61.558 66.667 13.93 10.61 42.32 3.35
156 157 2.125912 CCAACGCGCTAGCTGAGT 60.126 61.111 13.93 11.25 42.32 3.41
157 158 2.447887 CCAACGCGCTAGCTGAGTG 61.448 63.158 13.93 6.63 42.32 3.51
158 159 2.125912 AACGCGCTAGCTGAGTGG 60.126 61.111 13.93 0.00 42.32 4.00
159 160 4.803426 ACGCGCTAGCTGAGTGGC 62.803 66.667 13.93 6.56 42.32 5.01
162 163 2.882777 CGCTAGCTGAGTGGCGTG 60.883 66.667 13.93 0.00 42.23 5.34
163 164 3.191539 GCTAGCTGAGTGGCGTGC 61.192 66.667 7.70 0.00 37.29 5.34
164 165 2.575993 CTAGCTGAGTGGCGTGCT 59.424 61.111 0.00 0.00 39.30 4.40
165 166 1.808799 CTAGCTGAGTGGCGTGCTG 60.809 63.158 0.00 0.00 37.02 4.41
166 167 3.939837 TAGCTGAGTGGCGTGCTGC 62.940 63.158 0.00 0.00 45.38 5.25
401 415 2.113139 CCCGCCCCATGATACACC 59.887 66.667 0.00 0.00 0.00 4.16
435 449 2.674796 ACGTAGTGCTGATCCTTTCC 57.325 50.000 0.00 0.00 42.51 3.13
475 497 6.270064 TCGATTCGTAGTAGATGAAAATGCA 58.730 36.000 5.89 0.00 36.64 3.96
479 501 7.525688 TTCGTAGTAGATGAAAATGCAAGAG 57.474 36.000 0.00 0.00 29.73 2.85
482 504 6.313905 CGTAGTAGATGAAAATGCAAGAGGTT 59.686 38.462 0.00 0.00 0.00 3.50
483 505 6.749923 AGTAGATGAAAATGCAAGAGGTTC 57.250 37.500 0.00 0.00 0.00 3.62
484 506 5.649831 AGTAGATGAAAATGCAAGAGGTTCC 59.350 40.000 0.00 0.00 0.00 3.62
485 507 3.441572 AGATGAAAATGCAAGAGGTTCCG 59.558 43.478 0.00 0.00 0.00 4.30
486 508 2.582052 TGAAAATGCAAGAGGTTCCGT 58.418 42.857 0.00 0.00 0.00 4.69
488 510 1.247567 AAATGCAAGAGGTTCCGTGG 58.752 50.000 0.00 0.00 0.00 4.94
489 511 1.244019 AATGCAAGAGGTTCCGTGGC 61.244 55.000 0.00 0.00 0.00 5.01
490 512 3.423154 GCAAGAGGTTCCGTGGCG 61.423 66.667 0.00 0.00 0.00 5.69
491 513 2.030562 CAAGAGGTTCCGTGGCGT 59.969 61.111 0.00 0.00 0.00 5.68
492 514 2.030562 AAGAGGTTCCGTGGCGTG 59.969 61.111 0.00 0.00 0.00 5.34
493 515 3.530910 AAGAGGTTCCGTGGCGTGG 62.531 63.158 0.00 0.00 0.00 4.94
494 516 3.998672 GAGGTTCCGTGGCGTGGA 61.999 66.667 0.00 0.00 0.00 4.02
495 517 4.309950 AGGTTCCGTGGCGTGGAC 62.310 66.667 0.00 0.00 34.56 4.02
496 518 4.612412 GGTTCCGTGGCGTGGACA 62.612 66.667 0.00 0.00 34.56 4.02
497 519 3.041940 GTTCCGTGGCGTGGACAG 61.042 66.667 0.00 0.00 34.56 3.51
498 520 3.228017 TTCCGTGGCGTGGACAGA 61.228 61.111 0.00 0.00 34.56 3.41
499 521 3.509137 TTCCGTGGCGTGGACAGAC 62.509 63.158 0.00 0.00 34.56 3.51
500 522 4.293648 CCGTGGCGTGGACAGACA 62.294 66.667 0.00 0.00 0.00 3.41
501 523 2.734723 CGTGGCGTGGACAGACAG 60.735 66.667 0.00 0.00 0.00 3.51
502 524 2.734591 GTGGCGTGGACAGACAGA 59.265 61.111 0.00 0.00 0.00 3.41
503 525 1.664965 GTGGCGTGGACAGACAGAC 60.665 63.158 0.00 0.00 0.00 3.51
504 526 2.131067 TGGCGTGGACAGACAGACA 61.131 57.895 0.00 0.00 0.00 3.41
505 527 1.293498 GGCGTGGACAGACAGACAT 59.707 57.895 0.00 0.00 0.00 3.06
506 528 0.530744 GGCGTGGACAGACAGACATA 59.469 55.000 0.00 0.00 0.00 2.29
507 529 1.469940 GGCGTGGACAGACAGACATAG 60.470 57.143 0.00 0.00 0.00 2.23
508 530 1.469940 GCGTGGACAGACAGACATAGG 60.470 57.143 0.00 0.00 0.00 2.57
509 531 1.469940 CGTGGACAGACAGACATAGGC 60.470 57.143 0.00 0.00 0.00 3.93
511 533 1.827344 TGGACAGACAGACATAGGCAG 59.173 52.381 0.00 0.00 0.00 4.85
518 540 4.159321 CAGACAGACATAGGCAGAGAGAAA 59.841 45.833 0.00 0.00 0.00 2.52
519 541 4.961730 AGACAGACATAGGCAGAGAGAAAT 59.038 41.667 0.00 0.00 0.00 2.17
523 545 7.044798 ACAGACATAGGCAGAGAGAAATAAAC 58.955 38.462 0.00 0.00 0.00 2.01
524 546 6.199908 CAGACATAGGCAGAGAGAAATAAACG 59.800 42.308 0.00 0.00 0.00 3.60
527 549 7.275920 ACATAGGCAGAGAGAAATAAACGAAT 58.724 34.615 0.00 0.00 0.00 3.34
533 555 7.970614 GGCAGAGAGAAATAAACGAATGAAAAT 59.029 33.333 0.00 0.00 0.00 1.82
534 556 9.346725 GCAGAGAGAAATAAACGAATGAAAATT 57.653 29.630 0.00 0.00 0.00 1.82
546 568 4.799949 CGAATGAAAATTACTCGTCCGGTA 59.200 41.667 0.00 0.00 0.00 4.02
549 571 4.990257 TGAAAATTACTCGTCCGGTAGAG 58.010 43.478 21.38 21.38 40.16 2.43
550 572 4.142315 TGAAAATTACTCGTCCGGTAGAGG 60.142 45.833 24.77 12.41 38.72 3.69
551 573 1.316651 ATTACTCGTCCGGTAGAGGC 58.683 55.000 24.77 2.51 38.72 4.70
591 618 1.293498 GAAGCCTTGAGTGAGCGGA 59.707 57.895 0.00 0.00 0.00 5.54
601 628 1.682684 GTGAGCGGAAGGAGGAGGA 60.683 63.158 0.00 0.00 0.00 3.71
602 629 1.380515 TGAGCGGAAGGAGGAGGAG 60.381 63.158 0.00 0.00 0.00 3.69
603 630 1.380650 GAGCGGAAGGAGGAGGAGT 60.381 63.158 0.00 0.00 0.00 3.85
818 846 1.416049 CGAAGACCACATGTTCGCG 59.584 57.895 0.00 0.00 45.74 5.87
893 921 1.813192 GCCGAGAGACAGAGGAAGG 59.187 63.158 0.00 0.00 0.00 3.46
901 929 1.199615 GACAGAGGAAGGAGGAAGGG 58.800 60.000 0.00 0.00 0.00 3.95
947 976 1.146485 CCATCCAGCAGAGCAGAGG 59.854 63.158 0.00 0.00 0.00 3.69
952 981 1.142314 CAGCAGAGCAGAGGAGAGC 59.858 63.158 0.00 0.00 0.00 4.09
977 1006 2.125753 GGTCGGAGCAGAGCAGTG 60.126 66.667 1.64 0.00 38.41 3.66
978 1007 2.125753 GTCGGAGCAGAGCAGTGG 60.126 66.667 0.00 0.00 0.00 4.00
979 1008 4.074526 TCGGAGCAGAGCAGTGGC 62.075 66.667 0.00 0.00 41.61 5.01
1020 1049 2.799126 TGGATTACCACCACCATCAC 57.201 50.000 0.00 0.00 41.77 3.06
1021 1050 1.283613 TGGATTACCACCACCATCACC 59.716 52.381 0.00 0.00 41.77 4.02
1022 1051 1.283613 GGATTACCACCACCATCACCA 59.716 52.381 0.00 0.00 35.97 4.17
1023 1052 2.643551 GATTACCACCACCATCACCAG 58.356 52.381 0.00 0.00 0.00 4.00
1024 1053 0.037590 TTACCACCACCATCACCAGC 59.962 55.000 0.00 0.00 0.00 4.85
1025 1054 1.130678 TACCACCACCATCACCAGCA 61.131 55.000 0.00 0.00 0.00 4.41
1053 1094 4.161295 TTCCTGATGCCTCCGCCG 62.161 66.667 0.00 0.00 0.00 6.46
1105 1149 2.203379 CGATGATGGGCATGGGCA 60.203 61.111 0.00 0.00 43.71 5.36
1106 1150 1.605451 CGATGATGGGCATGGGCAT 60.605 57.895 0.00 0.00 43.71 4.40
1107 1151 1.873270 CGATGATGGGCATGGGCATG 61.873 60.000 0.00 0.00 43.71 4.06
1108 1152 1.535444 ATGATGGGCATGGGCATGG 60.535 57.895 0.00 0.00 43.71 3.66
1109 1153 2.026208 ATGATGGGCATGGGCATGGA 62.026 55.000 0.00 0.00 43.71 3.41
1110 1154 1.906824 GATGGGCATGGGCATGGAG 60.907 63.158 0.00 0.00 43.71 3.86
1111 1155 2.361865 GATGGGCATGGGCATGGAGA 62.362 60.000 0.00 0.00 43.71 3.71
1112 1156 1.736491 ATGGGCATGGGCATGGAGAT 61.736 55.000 0.00 0.00 43.71 2.75
1113 1157 1.906824 GGGCATGGGCATGGAGATG 60.907 63.158 0.00 0.00 43.71 2.90
1114 1158 1.906824 GGCATGGGCATGGAGATGG 60.907 63.158 0.00 0.00 43.71 3.51
1115 1159 1.906824 GCATGGGCATGGAGATGGG 60.907 63.158 0.00 0.00 40.72 4.00
1116 1160 1.906824 CATGGGCATGGAGATGGGC 60.907 63.158 0.00 0.00 35.24 5.36
1117 1161 2.397051 ATGGGCATGGAGATGGGCA 61.397 57.895 0.00 0.00 0.00 5.36
1118 1162 1.736491 ATGGGCATGGAGATGGGCAT 61.736 55.000 0.00 0.00 0.00 4.40
1119 1163 1.906824 GGGCATGGAGATGGGCATG 60.907 63.158 0.00 0.00 0.00 4.06
1120 1164 1.906824 GGCATGGAGATGGGCATGG 60.907 63.158 0.00 0.00 0.00 3.66
1121 1165 1.152138 GCATGGAGATGGGCATGGA 59.848 57.895 0.00 0.00 0.00 3.41
1122 1166 0.894184 GCATGGAGATGGGCATGGAG 60.894 60.000 0.00 0.00 0.00 3.86
1123 1167 0.769247 CATGGAGATGGGCATGGAGA 59.231 55.000 0.00 0.00 0.00 3.71
1124 1168 1.354705 CATGGAGATGGGCATGGAGAT 59.645 52.381 0.00 0.00 0.00 2.75
1125 1169 0.769247 TGGAGATGGGCATGGAGATG 59.231 55.000 0.00 0.00 0.00 2.90
1126 1170 0.037877 GGAGATGGGCATGGAGATGG 59.962 60.000 0.00 0.00 0.00 3.51
1127 1171 1.062364 GAGATGGGCATGGAGATGGA 58.938 55.000 0.00 0.00 0.00 3.41
1128 1172 1.003349 GAGATGGGCATGGAGATGGAG 59.997 57.143 0.00 0.00 0.00 3.86
1129 1173 1.062364 GATGGGCATGGAGATGGAGA 58.938 55.000 0.00 0.00 0.00 3.71
1130 1174 1.634459 GATGGGCATGGAGATGGAGAT 59.366 52.381 0.00 0.00 0.00 2.75
1131 1175 0.769247 TGGGCATGGAGATGGAGATG 59.231 55.000 0.00 0.00 0.00 2.90
1132 1176 0.037877 GGGCATGGAGATGGAGATGG 59.962 60.000 0.00 0.00 0.00 3.51
1133 1177 1.062364 GGCATGGAGATGGAGATGGA 58.938 55.000 0.00 0.00 0.00 3.41
1134 1178 1.003349 GGCATGGAGATGGAGATGGAG 59.997 57.143 0.00 0.00 0.00 3.86
1229 1273 1.079750 GGTTCACGGAGGAGCAGAC 60.080 63.158 0.00 0.00 0.00 3.51
1446 1490 1.444553 CGTCGAGTCCCTCAAGCAC 60.445 63.158 0.00 0.00 0.00 4.40
1476 1535 4.135153 CTCGCCGCACAGGTAGCT 62.135 66.667 0.00 0.00 43.70 3.32
1477 1536 2.752640 TCGCCGCACAGGTAGCTA 60.753 61.111 0.00 0.00 43.70 3.32
1478 1537 2.183300 CGCCGCACAGGTAGCTAA 59.817 61.111 0.00 0.00 43.70 3.09
1479 1538 1.227263 CGCCGCACAGGTAGCTAAT 60.227 57.895 0.00 0.00 43.70 1.73
1514 1573 6.631847 CGCACGTATTCTTAATCTCTTCTTG 58.368 40.000 0.00 0.00 0.00 3.02
1515 1574 6.291849 CGCACGTATTCTTAATCTCTTCTTGG 60.292 42.308 0.00 0.00 0.00 3.61
1518 1577 7.278868 CACGTATTCTTAATCTCTTCTTGGCTT 59.721 37.037 0.00 0.00 0.00 4.35
1519 1578 7.492994 ACGTATTCTTAATCTCTTCTTGGCTTC 59.507 37.037 0.00 0.00 0.00 3.86
1520 1579 7.708752 CGTATTCTTAATCTCTTCTTGGCTTCT 59.291 37.037 0.00 0.00 0.00 2.85
1521 1580 9.389755 GTATTCTTAATCTCTTCTTGGCTTCTT 57.610 33.333 0.00 0.00 0.00 2.52
1522 1581 7.678947 TTCTTAATCTCTTCTTGGCTTCTTG 57.321 36.000 0.00 0.00 0.00 3.02
1523 1582 5.645497 TCTTAATCTCTTCTTGGCTTCTTGC 59.355 40.000 0.00 0.00 41.94 4.01
1903 1976 3.423154 GGAACGCGGTGGCTTGAG 61.423 66.667 12.47 0.00 36.88 3.02
1971 2128 2.547634 TGTGTGTAGCTTCACGTACGTA 59.452 45.455 22.34 5.54 40.74 3.57
1972 2129 2.904932 GTGTGTAGCTTCACGTACGTAC 59.095 50.000 22.34 15.90 40.74 3.67
2015 2172 2.233271 CATCTGGTTGGGGATACATGC 58.767 52.381 0.00 0.00 39.74 4.06
2016 2173 0.180171 TCTGGTTGGGGATACATGCG 59.820 55.000 0.00 0.00 39.74 4.73
2017 2174 0.180171 CTGGTTGGGGATACATGCGA 59.820 55.000 0.00 0.00 39.74 5.10
2033 2199 3.839432 GAGAGAGGCGAACGGGGG 61.839 72.222 0.00 0.00 0.00 5.40
2064 2236 1.294459 GGGTGGGTCCGTGTAAGAC 59.706 63.158 0.00 0.00 37.00 3.01
2118 2299 2.046314 AAACCATGGAGGCGACCG 60.046 61.111 21.47 0.00 43.14 4.79
2137 2318 4.593033 CCAGCCAATGGGATCAGG 57.407 61.111 0.00 0.00 46.36 3.86
2163 2344 2.187707 GGATGCTGCTAAAATGTTGCG 58.812 47.619 0.00 0.00 0.00 4.85
2165 2346 2.617250 TGCTGCTAAAATGTTGCGAG 57.383 45.000 0.00 0.00 0.00 5.03
2181 2655 3.785486 TGCGAGTTAGAGATCATTGGTG 58.215 45.455 0.00 0.00 0.00 4.17
2214 2688 2.230992 AGCTGTTCTGTTTGTTGTTGCA 59.769 40.909 0.00 0.00 0.00 4.08
2241 2715 4.262164 GCTGTGAATTCAAATGTTGGAGGT 60.262 41.667 10.35 0.00 0.00 3.85
2246 2720 5.710099 TGAATTCAAATGTTGGAGGTAGGAC 59.290 40.000 5.45 0.00 0.00 3.85
2267 2741 7.308782 GGACCGATCCATCAATTGATAATAC 57.691 40.000 20.32 11.43 45.47 1.89
2270 2744 9.088512 GACCGATCCATCAATTGATAATACTAC 57.911 37.037 20.32 7.95 32.63 2.73
2294 2768 8.677148 ACAAAATACTGCTTCTCAACTTTAGA 57.323 30.769 0.00 0.00 0.00 2.10
2299 2773 8.940768 ATACTGCTTCTCAACTTTAGAATCTC 57.059 34.615 0.00 0.00 32.72 2.75
2304 2778 6.400515 GCTTCTCAACTTTAGAATCTCGTGTG 60.401 42.308 0.00 0.00 32.72 3.82
2336 2810 5.112686 GCAGTAGGTTCTTGTCTAGGATTG 58.887 45.833 0.00 0.00 0.00 2.67
2365 2839 3.485216 CGTTCATCATGGTTAGCCGTTTC 60.485 47.826 0.00 0.00 37.67 2.78
2387 2981 3.487544 CGCTAATTAACTTTCTGCAGCCC 60.488 47.826 9.47 0.00 0.00 5.19
2400 3031 1.340017 TGCAGCCCGCTTCTAGAAAAT 60.340 47.619 6.63 0.00 43.06 1.82
2428 3059 5.160641 ACATTAACGCCTAAAATTGCACTG 58.839 37.500 0.00 0.00 0.00 3.66
2434 3065 5.593010 ACGCCTAAAATTGCACTGTTTTAA 58.407 33.333 10.35 0.00 31.57 1.52
2452 3083 6.183360 TGTTTTAAGGTGTGCAACTTTAGAGG 60.183 38.462 7.84 0.00 39.43 3.69
2460 3091 5.691754 GTGTGCAACTTTAGAGGAAATTTGG 59.308 40.000 0.00 0.00 37.86 3.28
2537 3178 7.657336 TGATTCAAAACCTAAGAAATGTGACC 58.343 34.615 0.00 0.00 0.00 4.02
2568 3209 5.473504 AGCAAAGTTAAGACAACCGATGAAT 59.526 36.000 0.00 0.00 0.00 2.57
2570 3211 6.088085 GCAAAGTTAAGACAACCGATGAATTG 59.912 38.462 0.00 0.00 0.00 2.32
2577 3218 3.551846 ACAACCGATGAATTGATACCCC 58.448 45.455 0.00 0.00 0.00 4.95
2581 3222 2.069273 CGATGAATTGATACCCCTCGC 58.931 52.381 0.00 0.00 0.00 5.03
2588 3229 5.530915 TGAATTGATACCCCTCGCTTAATTG 59.469 40.000 0.00 0.00 0.00 2.32
2598 3242 4.379499 CCCTCGCTTAATTGGAGTTCAAAC 60.379 45.833 0.00 0.00 39.05 2.93
2601 3245 6.385649 TCGCTTAATTGGAGTTCAAACTTT 57.614 33.333 0.00 0.00 39.88 2.66
2602 3246 6.435428 TCGCTTAATTGGAGTTCAAACTTTC 58.565 36.000 0.00 0.00 39.88 2.62
2604 3248 6.695278 CGCTTAATTGGAGTTCAAACTTTCAA 59.305 34.615 11.97 11.97 39.88 2.69
2605 3249 7.305993 CGCTTAATTGGAGTTCAAACTTTCAAC 60.306 37.037 11.88 0.00 39.88 3.18
2621 3265 9.665719 AAACTTTCAACTTTTTGATTGGTATGT 57.334 25.926 0.00 0.00 41.50 2.29
2623 3267 9.097257 ACTTTCAACTTTTTGATTGGTATGTTG 57.903 29.630 0.00 0.00 41.50 3.33
2639 3283 8.039603 TGGTATGTTGATTGTTAGTGAATCAC 57.960 34.615 5.02 5.02 39.09 3.06
2642 3286 5.380900 TGTTGATTGTTAGTGAATCACCCA 58.619 37.500 10.12 1.91 39.09 4.51
2643 3287 5.830457 TGTTGATTGTTAGTGAATCACCCAA 59.170 36.000 10.12 10.87 39.09 4.12
2645 3289 5.009631 TGATTGTTAGTGAATCACCCAAGG 58.990 41.667 10.12 0.00 35.38 3.61
2646 3290 3.433306 TGTTAGTGAATCACCCAAGGG 57.567 47.619 10.12 2.91 42.03 3.95
2649 3294 4.141135 TGTTAGTGAATCACCCAAGGGAAA 60.141 41.667 13.15 0.00 38.96 3.13
2679 3324 7.985476 TGCTGCTAATATGTTTTCCTTTACTC 58.015 34.615 0.00 0.00 0.00 2.59
2687 3332 4.142038 TGTTTTCCTTTACTCTTGCTCCC 58.858 43.478 0.00 0.00 0.00 4.30
2691 3336 4.657814 TCCTTTACTCTTGCTCCCAATT 57.342 40.909 0.00 0.00 0.00 2.32
2692 3337 4.998051 TCCTTTACTCTTGCTCCCAATTT 58.002 39.130 0.00 0.00 0.00 1.82
2693 3338 5.393866 TCCTTTACTCTTGCTCCCAATTTT 58.606 37.500 0.00 0.00 0.00 1.82
2694 3339 6.548321 TCCTTTACTCTTGCTCCCAATTTTA 58.452 36.000 0.00 0.00 0.00 1.52
2695 3340 7.182060 TCCTTTACTCTTGCTCCCAATTTTAT 58.818 34.615 0.00 0.00 0.00 1.40
2696 3341 7.673926 TCCTTTACTCTTGCTCCCAATTTTATT 59.326 33.333 0.00 0.00 0.00 1.40
2697 3342 8.314021 CCTTTACTCTTGCTCCCAATTTTATTT 58.686 33.333 0.00 0.00 0.00 1.40
2698 3343 9.710900 CTTTACTCTTGCTCCCAATTTTATTTT 57.289 29.630 0.00 0.00 0.00 1.82
2729 3374 2.693591 TGATGTTAGGGGAACTCTAGCG 59.306 50.000 0.00 0.00 38.98 4.26
2737 3382 1.203025 GGGAACTCTAGCGGATCCCTA 60.203 57.143 15.19 7.89 45.21 3.53
2738 3383 2.164338 GGAACTCTAGCGGATCCCTAG 58.836 57.143 22.17 22.17 34.86 3.02
2743 3388 3.637694 ACTCTAGCGGATCCCTAGAAAAC 59.362 47.826 26.78 3.98 40.37 2.43
2748 3393 2.547826 CGGATCCCTAGAAAACGGTTC 58.452 52.381 6.06 0.00 0.00 3.62
2750 3395 3.431766 CGGATCCCTAGAAAACGGTTCAT 60.432 47.826 6.06 0.00 0.00 2.57
2758 3403 5.122396 CCTAGAAAACGGTTCATTCCTCAAG 59.878 44.000 0.00 0.00 0.00 3.02
2769 3414 7.170658 CGGTTCATTCCTCAAGATATTCTCTTC 59.829 40.741 0.00 0.00 42.48 2.87
2771 3416 6.753180 TCATTCCTCAAGATATTCTCTTCCG 58.247 40.000 0.00 0.00 42.48 4.30
2774 3419 5.696030 TCCTCAAGATATTCTCTTCCGAGA 58.304 41.667 0.00 0.00 42.48 4.04
2776 3421 5.300539 CCTCAAGATATTCTCTTCCGAGACA 59.699 44.000 0.00 0.00 45.61 3.41
2790 3435 3.130516 TCCGAGACATTAACTGCACCTAG 59.869 47.826 0.00 0.00 0.00 3.02
2791 3436 2.860735 CGAGACATTAACTGCACCTAGC 59.139 50.000 0.00 0.00 45.96 3.42
2792 3437 3.429547 CGAGACATTAACTGCACCTAGCT 60.430 47.826 0.00 0.00 45.94 3.32
2798 3443 6.238648 ACATTAACTGCACCTAGCTAAACTT 58.761 36.000 0.00 0.00 45.94 2.66
2865 3511 6.183360 ACAAATTCCCAACTCTCTCAGTTTTG 60.183 38.462 0.00 0.00 43.38 2.44
2885 3531 3.173151 TGAGAGGCCTCATAAGTTCACA 58.827 45.455 33.90 15.27 44.01 3.58
2887 3533 2.237392 AGAGGCCTCATAAGTTCACACC 59.763 50.000 33.90 2.59 0.00 4.16
2890 3536 3.010584 AGGCCTCATAAGTTCACACCAAT 59.989 43.478 0.00 0.00 0.00 3.16
2895 3541 7.448469 GGCCTCATAAGTTCACACCAATAATAT 59.552 37.037 0.00 0.00 0.00 1.28
2934 3580 5.888161 GCAAAATATTCCTTCTTCTCTCCCA 59.112 40.000 0.00 0.00 0.00 4.37
2943 3589 0.247460 CTTCTCTCCCATGCACGACA 59.753 55.000 0.00 0.00 0.00 4.35
2945 3591 0.900182 TCTCTCCCATGCACGACACT 60.900 55.000 0.00 0.00 0.00 3.55
2955 3601 0.670854 GCACGACACTTCCTCCTTCC 60.671 60.000 0.00 0.00 0.00 3.46
2961 3607 0.036875 CACTTCCTCCTTCCGCCTTT 59.963 55.000 0.00 0.00 0.00 3.11
2964 3610 0.476771 TTCCTCCTTCCGCCTTTGTT 59.523 50.000 0.00 0.00 0.00 2.83
2971 3617 1.112315 TTCCGCCTTTGTTGCCACAT 61.112 50.000 0.00 0.00 31.06 3.21
2974 3620 1.202290 CCGCCTTTGTTGCCACATATC 60.202 52.381 0.00 0.00 31.06 1.63
2977 3623 1.202290 CCTTTGTTGCCACATATCGCC 60.202 52.381 0.00 0.00 31.06 5.54
2979 3625 1.761449 TTGTTGCCACATATCGCCAT 58.239 45.000 0.00 0.00 31.06 4.40
2981 3627 0.235665 GTTGCCACATATCGCCATCG 59.764 55.000 0.00 0.00 0.00 3.84
2985 3631 1.494628 CACATATCGCCATCGCAGC 59.505 57.895 0.00 0.00 35.26 5.25
2991 3637 4.529219 CGCCATCGCAGCCACCTA 62.529 66.667 0.00 0.00 34.03 3.08
2999 3645 1.895020 CGCAGCCACCTACCACCTTA 61.895 60.000 0.00 0.00 0.00 2.69
3006 3652 2.172717 CCACCTACCACCTTAGGAATGG 59.827 54.545 4.77 5.74 41.29 3.16
3008 3654 3.521937 CACCTACCACCTTAGGAATGGAA 59.478 47.826 13.98 0.00 41.29 3.53
3009 3655 3.522343 ACCTACCACCTTAGGAATGGAAC 59.478 47.826 13.98 0.00 41.29 3.62
3010 3656 3.118000 CCTACCACCTTAGGAATGGAACC 60.118 52.174 13.98 0.00 41.29 3.62
3011 3657 1.639108 ACCACCTTAGGAATGGAACCC 59.361 52.381 13.98 0.00 36.94 4.11
3012 3658 1.923148 CCACCTTAGGAATGGAACCCT 59.077 52.381 4.77 0.00 35.33 4.34
3013 3659 2.092375 CCACCTTAGGAATGGAACCCTC 60.092 54.545 4.77 0.00 35.33 4.30
3014 3660 1.838077 ACCTTAGGAATGGAACCCTCG 59.162 52.381 4.77 0.00 34.11 4.63
3015 3661 1.141053 CCTTAGGAATGGAACCCTCGG 59.859 57.143 0.00 0.00 34.11 4.63
3016 3662 1.838077 CTTAGGAATGGAACCCTCGGT 59.162 52.381 0.00 0.00 37.65 4.69
3017 3663 1.492764 TAGGAATGGAACCCTCGGTC 58.507 55.000 0.00 0.00 33.12 4.79
3018 3664 1.153429 GGAATGGAACCCTCGGTCG 60.153 63.158 0.00 0.00 33.12 4.79
3019 3665 1.814169 GAATGGAACCCTCGGTCGC 60.814 63.158 0.00 0.00 33.12 5.19
3020 3666 3.325201 AATGGAACCCTCGGTCGCC 62.325 63.158 0.00 0.00 33.12 5.54
3022 3668 4.144703 GGAACCCTCGGTCGCCTC 62.145 72.222 0.00 0.00 33.12 4.70
3023 3669 4.144703 GAACCCTCGGTCGCCTCC 62.145 72.222 0.00 0.00 33.12 4.30
3027 3673 4.436998 CCTCGGTCGCCTCCACAC 62.437 72.222 0.00 0.00 0.00 3.82
3028 3674 4.436998 CTCGGTCGCCTCCACACC 62.437 72.222 0.00 0.00 0.00 4.16
3063 3709 4.107051 GCTGCCGCGCACAAAGAT 62.107 61.111 8.75 0.00 33.79 2.40
3064 3710 2.562912 CTGCCGCGCACAAAGATT 59.437 55.556 8.75 0.00 33.79 2.40
3065 3711 1.081242 CTGCCGCGCACAAAGATTT 60.081 52.632 8.75 0.00 33.79 2.17
3066 3712 1.339235 CTGCCGCGCACAAAGATTTG 61.339 55.000 8.75 3.79 43.62 2.32
3067 3713 2.088178 GCCGCGCACAAAGATTTGG 61.088 57.895 8.75 0.00 42.34 3.28
3068 3714 1.285641 CCGCGCACAAAGATTTGGT 59.714 52.632 8.75 0.00 42.34 3.67
3069 3715 0.318614 CCGCGCACAAAGATTTGGTT 60.319 50.000 8.75 0.00 42.34 3.67
3070 3716 0.777631 CGCGCACAAAGATTTGGTTG 59.222 50.000 8.75 1.67 42.34 3.77
3071 3717 1.139163 GCGCACAAAGATTTGGTTGG 58.861 50.000 0.30 0.00 42.34 3.77
3072 3718 1.269517 GCGCACAAAGATTTGGTTGGA 60.270 47.619 0.30 0.00 42.34 3.53
3073 3719 2.664916 CGCACAAAGATTTGGTTGGAG 58.335 47.619 9.91 0.00 42.34 3.86
3074 3720 2.407090 GCACAAAGATTTGGTTGGAGC 58.593 47.619 9.91 1.26 42.34 4.70
3075 3721 2.036346 GCACAAAGATTTGGTTGGAGCT 59.964 45.455 9.91 0.00 42.34 4.09
3076 3722 3.645884 CACAAAGATTTGGTTGGAGCTG 58.354 45.455 9.91 0.00 42.34 4.24
3077 3723 3.068590 CACAAAGATTTGGTTGGAGCTGT 59.931 43.478 9.91 0.00 42.34 4.40
3078 3724 3.068590 ACAAAGATTTGGTTGGAGCTGTG 59.931 43.478 9.91 0.00 42.34 3.66
3079 3725 1.915141 AGATTTGGTTGGAGCTGTGG 58.085 50.000 0.00 0.00 0.00 4.17
3080 3726 0.244721 GATTTGGTTGGAGCTGTGGC 59.755 55.000 0.00 0.00 39.06 5.01
3081 3727 0.469705 ATTTGGTTGGAGCTGTGGCA 60.470 50.000 0.00 0.00 41.70 4.92
3082 3728 1.108727 TTTGGTTGGAGCTGTGGCAG 61.109 55.000 0.00 0.00 41.70 4.85
3083 3729 1.993701 TTGGTTGGAGCTGTGGCAGA 61.994 55.000 0.00 0.00 41.70 4.26
3084 3730 1.001641 GGTTGGAGCTGTGGCAGAT 60.002 57.895 0.00 0.00 41.70 2.90
3085 3731 0.610232 GGTTGGAGCTGTGGCAGATT 60.610 55.000 0.00 0.00 41.70 2.40
3086 3732 1.251251 GTTGGAGCTGTGGCAGATTT 58.749 50.000 0.00 0.00 41.70 2.17
3087 3733 1.068055 GTTGGAGCTGTGGCAGATTTG 60.068 52.381 0.00 0.00 41.70 2.32
3088 3734 0.401356 TGGAGCTGTGGCAGATTTGA 59.599 50.000 0.00 0.00 41.70 2.69
3089 3735 0.807496 GGAGCTGTGGCAGATTTGAC 59.193 55.000 0.00 0.00 41.70 3.18
3090 3736 0.807496 GAGCTGTGGCAGATTTGACC 59.193 55.000 0.00 0.00 41.70 4.02
3091 3737 0.957395 AGCTGTGGCAGATTTGACCG 60.957 55.000 0.00 0.00 41.70 4.79
3092 3738 0.955428 GCTGTGGCAGATTTGACCGA 60.955 55.000 0.00 0.00 38.54 4.69
3093 3739 1.742761 CTGTGGCAGATTTGACCGAT 58.257 50.000 0.00 0.00 32.44 4.18
3094 3740 1.667724 CTGTGGCAGATTTGACCGATC 59.332 52.381 0.00 0.00 32.44 3.69
3095 3741 1.278985 TGTGGCAGATTTGACCGATCT 59.721 47.619 0.00 0.00 34.26 2.75
3099 3745 1.645034 CAGATTTGACCGATCTGCGT 58.355 50.000 1.63 0.00 42.68 5.24
3100 3746 1.325640 CAGATTTGACCGATCTGCGTG 59.674 52.381 1.63 0.00 42.68 5.34
3101 3747 0.026803 GATTTGACCGATCTGCGTGC 59.973 55.000 0.00 0.00 38.67 5.34
3102 3748 0.391661 ATTTGACCGATCTGCGTGCT 60.392 50.000 0.00 0.00 38.67 4.40
3103 3749 1.291184 TTTGACCGATCTGCGTGCTG 61.291 55.000 0.00 0.00 38.67 4.41
3104 3750 2.125912 GACCGATCTGCGTGCTGT 60.126 61.111 0.00 0.00 38.67 4.40
3105 3751 1.738099 GACCGATCTGCGTGCTGTT 60.738 57.895 0.00 0.00 38.67 3.16
3106 3752 1.687494 GACCGATCTGCGTGCTGTTC 61.687 60.000 0.00 0.00 38.67 3.18
3107 3753 1.446792 CCGATCTGCGTGCTGTTCT 60.447 57.895 7.79 0.00 38.67 3.01
3108 3754 1.690283 CCGATCTGCGTGCTGTTCTG 61.690 60.000 7.79 0.00 38.67 3.02
3109 3755 1.690283 CGATCTGCGTGCTGTTCTGG 61.690 60.000 7.79 0.00 34.64 3.86
3110 3756 1.364626 GATCTGCGTGCTGTTCTGGG 61.365 60.000 0.00 0.00 0.00 4.45
3111 3757 2.116983 ATCTGCGTGCTGTTCTGGGT 62.117 55.000 0.00 0.00 0.00 4.51
3112 3758 2.280797 TGCGTGCTGTTCTGGGTC 60.281 61.111 0.00 0.00 0.00 4.46
3113 3759 3.050275 GCGTGCTGTTCTGGGTCC 61.050 66.667 0.00 0.00 0.00 4.46
3114 3760 2.743718 CGTGCTGTTCTGGGTCCT 59.256 61.111 0.00 0.00 0.00 3.85
3115 3761 1.071471 CGTGCTGTTCTGGGTCCTT 59.929 57.895 0.00 0.00 0.00 3.36
3116 3762 0.535102 CGTGCTGTTCTGGGTCCTTT 60.535 55.000 0.00 0.00 0.00 3.11
3117 3763 0.954452 GTGCTGTTCTGGGTCCTTTG 59.046 55.000 0.00 0.00 0.00 2.77
3118 3764 0.550914 TGCTGTTCTGGGTCCTTTGT 59.449 50.000 0.00 0.00 0.00 2.83
3119 3765 1.239347 GCTGTTCTGGGTCCTTTGTC 58.761 55.000 0.00 0.00 0.00 3.18
3120 3766 1.476833 GCTGTTCTGGGTCCTTTGTCA 60.477 52.381 0.00 0.00 0.00 3.58
3121 3767 2.498167 CTGTTCTGGGTCCTTTGTCAG 58.502 52.381 0.00 0.00 0.00 3.51
3122 3768 1.239347 GTTCTGGGTCCTTTGTCAGC 58.761 55.000 0.00 0.00 0.00 4.26
3123 3769 0.843309 TTCTGGGTCCTTTGTCAGCA 59.157 50.000 0.00 0.00 0.00 4.41
3124 3770 0.108585 TCTGGGTCCTTTGTCAGCAC 59.891 55.000 0.00 0.00 0.00 4.40
3125 3771 0.179020 CTGGGTCCTTTGTCAGCACA 60.179 55.000 0.00 0.00 0.00 4.57
3126 3772 0.465460 TGGGTCCTTTGTCAGCACAC 60.465 55.000 0.00 0.00 29.76 3.82
3127 3773 1.507141 GGGTCCTTTGTCAGCACACG 61.507 60.000 0.00 0.00 29.76 4.49
3128 3774 0.531974 GGTCCTTTGTCAGCACACGA 60.532 55.000 0.00 0.00 29.76 4.35
3129 3775 0.861837 GTCCTTTGTCAGCACACGAG 59.138 55.000 0.00 0.00 29.76 4.18
3130 3776 0.464036 TCCTTTGTCAGCACACGAGT 59.536 50.000 0.00 0.00 29.76 4.18
3131 3777 1.684450 TCCTTTGTCAGCACACGAGTA 59.316 47.619 0.00 0.00 29.76 2.59
3132 3778 1.792949 CCTTTGTCAGCACACGAGTAC 59.207 52.381 0.00 0.00 29.76 2.73
3133 3779 1.792949 CTTTGTCAGCACACGAGTACC 59.207 52.381 0.00 0.00 29.76 3.34
3134 3780 1.037493 TTGTCAGCACACGAGTACCT 58.963 50.000 0.00 0.00 29.76 3.08
3135 3781 0.313987 TGTCAGCACACGAGTACCTG 59.686 55.000 0.00 0.00 0.00 4.00
3136 3782 0.388649 GTCAGCACACGAGTACCTGG 60.389 60.000 11.09 0.00 31.12 4.45
3137 3783 0.826256 TCAGCACACGAGTACCTGGT 60.826 55.000 4.05 4.05 31.12 4.00
3138 3784 0.667487 CAGCACACGAGTACCTGGTG 60.667 60.000 10.23 5.05 43.92 4.17
3141 3787 4.861883 CACGAGTACCTGGTGTCG 57.138 61.111 23.84 23.84 35.88 4.35
3142 3788 2.250646 CACGAGTACCTGGTGTCGA 58.749 57.895 29.16 1.92 35.88 4.20
3143 3789 0.594602 CACGAGTACCTGGTGTCGAA 59.405 55.000 29.16 1.55 35.88 3.71
3144 3790 1.001048 CACGAGTACCTGGTGTCGAAA 60.001 52.381 29.16 0.84 35.88 3.46
3145 3791 1.682854 ACGAGTACCTGGTGTCGAAAA 59.317 47.619 29.16 0.14 36.30 2.29
3146 3792 2.298163 ACGAGTACCTGGTGTCGAAAAT 59.702 45.455 29.16 12.21 36.30 1.82
3147 3793 2.921754 CGAGTACCTGGTGTCGAAAATC 59.078 50.000 22.09 5.24 34.28 2.17
3148 3794 3.613193 CGAGTACCTGGTGTCGAAAATCA 60.613 47.826 22.09 0.00 34.28 2.57
3149 3795 3.660865 AGTACCTGGTGTCGAAAATCAC 58.339 45.455 10.23 0.00 0.00 3.06
3153 3799 1.500396 GGTGTCGAAAATCACCCGC 59.500 57.895 10.99 0.00 45.70 6.13
3154 3800 1.231958 GGTGTCGAAAATCACCCGCA 61.232 55.000 10.99 0.00 45.70 5.69
3155 3801 0.165944 GTGTCGAAAATCACCCGCAG 59.834 55.000 0.00 0.00 0.00 5.18
3156 3802 1.134694 GTCGAAAATCACCCGCAGC 59.865 57.895 0.00 0.00 0.00 5.25
3157 3803 1.302112 TCGAAAATCACCCGCAGCA 60.302 52.632 0.00 0.00 0.00 4.41
3158 3804 0.886938 TCGAAAATCACCCGCAGCAA 60.887 50.000 0.00 0.00 0.00 3.91
3159 3805 0.729140 CGAAAATCACCCGCAGCAAC 60.729 55.000 0.00 0.00 0.00 4.17
3160 3806 0.729140 GAAAATCACCCGCAGCAACG 60.729 55.000 0.00 0.00 0.00 4.10
3161 3807 1.169661 AAAATCACCCGCAGCAACGA 61.170 50.000 0.00 0.00 34.06 3.85
3162 3808 1.852067 AAATCACCCGCAGCAACGAC 61.852 55.000 0.00 0.00 34.06 4.34
3163 3809 4.980805 TCACCCGCAGCAACGACC 62.981 66.667 0.00 0.00 34.06 4.79
3165 3811 4.329545 ACCCGCAGCAACGACCAT 62.330 61.111 0.00 0.00 34.06 3.55
3166 3812 3.803082 CCCGCAGCAACGACCATG 61.803 66.667 0.00 0.00 34.06 3.66
3167 3813 3.803082 CCGCAGCAACGACCATGG 61.803 66.667 11.19 11.19 34.06 3.66
3168 3814 4.465512 CGCAGCAACGACCATGGC 62.466 66.667 13.04 3.65 34.06 4.40
3169 3815 3.364441 GCAGCAACGACCATGGCA 61.364 61.111 13.04 0.00 0.00 4.92
3170 3816 2.872557 CAGCAACGACCATGGCAG 59.127 61.111 13.04 8.72 0.00 4.85
3171 3817 3.058160 AGCAACGACCATGGCAGC 61.058 61.111 13.04 8.98 0.00 5.25
3172 3818 4.465512 GCAACGACCATGGCAGCG 62.466 66.667 13.04 15.82 0.00 5.18
3173 3819 4.465512 CAACGACCATGGCAGCGC 62.466 66.667 13.04 0.00 0.00 5.92
3188 3834 4.129737 CGCCGTCGACTGGTGGAT 62.130 66.667 23.51 0.00 38.10 3.41
3189 3835 2.509336 GCCGTCGACTGGTGGATG 60.509 66.667 21.74 2.73 0.00 3.51
3190 3836 2.970639 CCGTCGACTGGTGGATGT 59.029 61.111 14.70 0.00 0.00 3.06
3191 3837 1.153823 CCGTCGACTGGTGGATGTC 60.154 63.158 14.70 0.00 0.00 3.06
3192 3838 1.153823 CGTCGACTGGTGGATGTCC 60.154 63.158 14.70 0.00 0.00 4.02
3193 3839 1.153823 GTCGACTGGTGGATGTCCG 60.154 63.158 8.70 0.00 39.43 4.79
3194 3840 2.184322 CGACTGGTGGATGTCCGG 59.816 66.667 0.00 0.00 39.43 5.14
3195 3841 2.646175 CGACTGGTGGATGTCCGGT 61.646 63.158 0.00 0.00 45.91 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.283029 CAGGAAGGGACATCACCATGT 59.717 52.381 0.00 0.00 46.64 3.21
38 39 1.409241 CCAGGAAGGGACATCACCATG 60.409 57.143 0.00 0.00 35.92 3.66
39 40 0.921896 CCAGGAAGGGACATCACCAT 59.078 55.000 0.00 0.00 0.00 3.55
40 41 0.475632 ACCAGGAAGGGACATCACCA 60.476 55.000 0.00 0.00 43.89 4.17
41 42 1.580059 TACCAGGAAGGGACATCACC 58.420 55.000 0.00 0.00 43.89 4.02
42 43 3.344515 GTTTACCAGGAAGGGACATCAC 58.655 50.000 0.00 0.00 43.89 3.06
43 44 2.027561 CGTTTACCAGGAAGGGACATCA 60.028 50.000 0.00 0.00 43.89 3.07
44 45 2.235402 TCGTTTACCAGGAAGGGACATC 59.765 50.000 0.00 0.00 43.89 3.06
45 46 2.262637 TCGTTTACCAGGAAGGGACAT 58.737 47.619 0.00 0.00 43.89 3.06
46 47 1.719529 TCGTTTACCAGGAAGGGACA 58.280 50.000 0.00 0.00 43.89 4.02
47 48 2.235402 TGATCGTTTACCAGGAAGGGAC 59.765 50.000 0.00 0.00 43.89 4.46
48 49 2.542550 TGATCGTTTACCAGGAAGGGA 58.457 47.619 0.00 0.00 43.89 4.20
49 50 3.343941 TTGATCGTTTACCAGGAAGGG 57.656 47.619 0.00 0.00 43.89 3.95
50 51 3.555956 CGATTGATCGTTTACCAGGAAGG 59.444 47.826 5.26 0.00 44.74 3.46
51 52 4.778842 CGATTGATCGTTTACCAGGAAG 57.221 45.455 5.26 0.00 44.74 3.46
64 65 3.871594 CCCAGTTTACCACTCGATTGATC 59.128 47.826 4.04 0.00 30.92 2.92
65 66 3.517901 TCCCAGTTTACCACTCGATTGAT 59.482 43.478 4.04 0.00 30.92 2.57
66 67 2.901192 TCCCAGTTTACCACTCGATTGA 59.099 45.455 4.04 0.00 30.92 2.57
67 68 3.262420 CTCCCAGTTTACCACTCGATTG 58.738 50.000 0.00 0.00 30.92 2.67
68 69 2.904434 ACTCCCAGTTTACCACTCGATT 59.096 45.455 0.00 0.00 30.92 3.34
69 70 2.537143 ACTCCCAGTTTACCACTCGAT 58.463 47.619 0.00 0.00 30.92 3.59
70 71 2.005370 ACTCCCAGTTTACCACTCGA 57.995 50.000 0.00 0.00 30.92 4.04
71 72 2.824341 ACTACTCCCAGTTTACCACTCG 59.176 50.000 0.00 0.00 30.92 4.18
72 73 5.015515 ACTACTACTCCCAGTTTACCACTC 58.984 45.833 0.00 0.00 30.92 3.51
73 74 5.008165 ACTACTACTCCCAGTTTACCACT 57.992 43.478 0.00 0.00 35.35 4.00
74 75 6.183347 TCTACTACTACTCCCAGTTTACCAC 58.817 44.000 0.00 0.00 0.00 4.16
75 76 6.392911 TCTACTACTACTCCCAGTTTACCA 57.607 41.667 0.00 0.00 0.00 3.25
76 77 6.183360 CGTTCTACTACTACTCCCAGTTTACC 60.183 46.154 0.00 0.00 0.00 2.85
77 78 6.676700 GCGTTCTACTACTACTCCCAGTTTAC 60.677 46.154 0.00 0.00 0.00 2.01
78 79 5.355350 GCGTTCTACTACTACTCCCAGTTTA 59.645 44.000 0.00 0.00 0.00 2.01
79 80 4.157472 GCGTTCTACTACTACTCCCAGTTT 59.843 45.833 0.00 0.00 0.00 2.66
80 81 3.693578 GCGTTCTACTACTACTCCCAGTT 59.306 47.826 0.00 0.00 0.00 3.16
81 82 3.277715 GCGTTCTACTACTACTCCCAGT 58.722 50.000 0.00 0.00 0.00 4.00
82 83 3.065095 GTGCGTTCTACTACTACTCCCAG 59.935 52.174 0.00 0.00 0.00 4.45
83 84 3.012518 GTGCGTTCTACTACTACTCCCA 58.987 50.000 0.00 0.00 0.00 4.37
84 85 3.012518 TGTGCGTTCTACTACTACTCCC 58.987 50.000 0.00 0.00 0.00 4.30
85 86 3.937706 TCTGTGCGTTCTACTACTACTCC 59.062 47.826 0.00 0.00 0.00 3.85
86 87 4.034279 CCTCTGTGCGTTCTACTACTACTC 59.966 50.000 0.00 0.00 0.00 2.59
87 88 3.940221 CCTCTGTGCGTTCTACTACTACT 59.060 47.826 0.00 0.00 0.00 2.57
88 89 3.487209 GCCTCTGTGCGTTCTACTACTAC 60.487 52.174 0.00 0.00 0.00 2.73
89 90 2.681848 GCCTCTGTGCGTTCTACTACTA 59.318 50.000 0.00 0.00 0.00 1.82
90 91 1.473278 GCCTCTGTGCGTTCTACTACT 59.527 52.381 0.00 0.00 0.00 2.57
91 92 1.910688 GCCTCTGTGCGTTCTACTAC 58.089 55.000 0.00 0.00 0.00 2.73
112 113 4.680237 TCGCCTGTTGTCGCCTGG 62.680 66.667 0.00 0.00 0.00 4.45
113 114 3.414700 GTCGCCTGTTGTCGCCTG 61.415 66.667 0.00 0.00 0.00 4.85
114 115 3.454587 TTGTCGCCTGTTGTCGCCT 62.455 57.895 0.00 0.00 0.00 5.52
115 116 2.954753 CTTGTCGCCTGTTGTCGCC 61.955 63.158 0.00 0.00 0.00 5.54
116 117 1.954146 TCTTGTCGCCTGTTGTCGC 60.954 57.895 0.00 0.00 0.00 5.19
117 118 1.557443 GGTCTTGTCGCCTGTTGTCG 61.557 60.000 0.00 0.00 0.00 4.35
118 119 1.228657 GGGTCTTGTCGCCTGTTGTC 61.229 60.000 0.00 0.00 0.00 3.18
119 120 1.227853 GGGTCTTGTCGCCTGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
120 121 2.317609 CGGGTCTTGTCGCCTGTTG 61.318 63.158 0.00 0.00 0.00 3.33
121 122 2.030562 CGGGTCTTGTCGCCTGTT 59.969 61.111 0.00 0.00 0.00 3.16
122 123 4.681978 GCGGGTCTTGTCGCCTGT 62.682 66.667 0.00 0.00 45.42 4.00
127 128 3.411351 CGTTGGCGGGTCTTGTCG 61.411 66.667 0.00 0.00 0.00 4.35
128 129 3.723348 GCGTTGGCGGGTCTTGTC 61.723 66.667 0.00 0.00 38.78 3.18
138 139 3.558411 CTCAGCTAGCGCGTTGGC 61.558 66.667 23.08 23.08 42.32 4.52
139 140 2.125912 ACTCAGCTAGCGCGTTGG 60.126 61.111 9.55 4.52 42.32 3.77
140 141 2.447887 CCACTCAGCTAGCGCGTTG 61.448 63.158 9.55 1.81 42.32 4.10
141 142 2.125912 CCACTCAGCTAGCGCGTT 60.126 61.111 9.55 3.54 42.32 4.84
142 143 4.803426 GCCACTCAGCTAGCGCGT 62.803 66.667 9.55 4.91 42.32 6.01
146 147 3.191539 GCACGCCACTCAGCTAGC 61.192 66.667 6.62 6.62 0.00 3.42
147 148 1.808799 CAGCACGCCACTCAGCTAG 60.809 63.158 0.00 0.00 35.19 3.42
148 149 2.262603 CAGCACGCCACTCAGCTA 59.737 61.111 0.00 0.00 35.19 3.32
401 415 3.553511 CACTACGTAGTACTACTCCGGTG 59.446 52.174 26.95 22.62 45.11 4.94
435 449 3.032609 GATCGATCGGCTGCACGG 61.033 66.667 16.41 0.00 0.00 4.94
464 486 3.191371 ACGGAACCTCTTGCATTTTCATC 59.809 43.478 0.00 0.00 0.00 2.92
475 497 2.030562 CACGCCACGGAACCTCTT 59.969 61.111 0.00 0.00 0.00 2.85
479 501 4.612412 TGTCCACGCCACGGAACC 62.612 66.667 0.00 0.00 33.29 3.62
482 504 3.986006 GTCTGTCCACGCCACGGA 61.986 66.667 0.00 0.00 0.00 4.69
483 505 4.293648 TGTCTGTCCACGCCACGG 62.294 66.667 0.00 0.00 0.00 4.94
484 506 2.734723 CTGTCTGTCCACGCCACG 60.735 66.667 0.00 0.00 0.00 4.94
485 507 1.664965 GTCTGTCTGTCCACGCCAC 60.665 63.158 0.00 0.00 0.00 5.01
486 508 1.471829 ATGTCTGTCTGTCCACGCCA 61.472 55.000 0.00 0.00 0.00 5.69
488 510 1.469940 CCTATGTCTGTCTGTCCACGC 60.470 57.143 0.00 0.00 0.00 5.34
489 511 1.469940 GCCTATGTCTGTCTGTCCACG 60.470 57.143 0.00 0.00 0.00 4.94
490 512 1.550524 TGCCTATGTCTGTCTGTCCAC 59.449 52.381 0.00 0.00 0.00 4.02
491 513 1.827344 CTGCCTATGTCTGTCTGTCCA 59.173 52.381 0.00 0.00 0.00 4.02
492 514 2.100584 CTCTGCCTATGTCTGTCTGTCC 59.899 54.545 0.00 0.00 0.00 4.02
493 515 3.020274 TCTCTGCCTATGTCTGTCTGTC 58.980 50.000 0.00 0.00 0.00 3.51
494 516 3.023119 CTCTCTGCCTATGTCTGTCTGT 58.977 50.000 0.00 0.00 0.00 3.41
495 517 3.286353 TCTCTCTGCCTATGTCTGTCTG 58.714 50.000 0.00 0.00 0.00 3.51
496 518 3.660970 TCTCTCTGCCTATGTCTGTCT 57.339 47.619 0.00 0.00 0.00 3.41
497 519 4.727507 TTTCTCTCTGCCTATGTCTGTC 57.272 45.455 0.00 0.00 0.00 3.51
498 520 6.798427 TTATTTCTCTCTGCCTATGTCTGT 57.202 37.500 0.00 0.00 0.00 3.41
499 521 6.199908 CGTTTATTTCTCTCTGCCTATGTCTG 59.800 42.308 0.00 0.00 0.00 3.51
500 522 6.096987 TCGTTTATTTCTCTCTGCCTATGTCT 59.903 38.462 0.00 0.00 0.00 3.41
501 523 6.273825 TCGTTTATTTCTCTCTGCCTATGTC 58.726 40.000 0.00 0.00 0.00 3.06
502 524 6.222038 TCGTTTATTTCTCTCTGCCTATGT 57.778 37.500 0.00 0.00 0.00 2.29
503 525 7.439356 TCATTCGTTTATTTCTCTCTGCCTATG 59.561 37.037 0.00 0.00 0.00 2.23
504 526 7.500992 TCATTCGTTTATTTCTCTCTGCCTAT 58.499 34.615 0.00 0.00 0.00 2.57
505 527 6.873997 TCATTCGTTTATTTCTCTCTGCCTA 58.126 36.000 0.00 0.00 0.00 3.93
506 528 5.734720 TCATTCGTTTATTTCTCTCTGCCT 58.265 37.500 0.00 0.00 0.00 4.75
507 529 6.422776 TTCATTCGTTTATTTCTCTCTGCC 57.577 37.500 0.00 0.00 0.00 4.85
508 530 8.902040 ATTTTCATTCGTTTATTTCTCTCTGC 57.098 30.769 0.00 0.00 0.00 4.26
518 540 7.396419 CGGACGAGTAATTTTCATTCGTTTAT 58.604 34.615 0.00 0.00 43.65 1.40
519 541 6.183360 CCGGACGAGTAATTTTCATTCGTTTA 60.183 38.462 0.00 0.00 43.65 2.01
523 545 3.615496 ACCGGACGAGTAATTTTCATTCG 59.385 43.478 9.46 0.00 37.31 3.34
524 546 6.038356 TCTACCGGACGAGTAATTTTCATTC 58.962 40.000 9.46 0.00 0.00 2.67
527 549 4.142315 CCTCTACCGGACGAGTAATTTTCA 60.142 45.833 9.46 0.00 0.00 2.69
533 555 0.254178 AGCCTCTACCGGACGAGTAA 59.746 55.000 9.46 0.00 0.00 2.24
534 556 0.254178 AAGCCTCTACCGGACGAGTA 59.746 55.000 9.46 0.00 0.00 2.59
537 559 2.707849 GCAAGCCTCTACCGGACGA 61.708 63.158 9.46 2.32 0.00 4.20
546 568 2.014068 GCCTACGAATTGCAAGCCTCT 61.014 52.381 4.94 0.00 0.00 3.69
549 571 1.433471 GGCCTACGAATTGCAAGCC 59.567 57.895 4.94 6.57 0.00 4.35
583 610 1.671901 CTCCTCCTCCTTCCGCTCAC 61.672 65.000 0.00 0.00 0.00 3.51
591 618 2.930109 TGCTTCTACTCCTCCTCCTT 57.070 50.000 0.00 0.00 0.00 3.36
601 628 4.006319 GGTGCAAAGATCTTGCTTCTACT 58.994 43.478 22.12 0.05 45.13 2.57
602 629 3.127721 GGGTGCAAAGATCTTGCTTCTAC 59.872 47.826 22.12 15.07 45.13 2.59
603 630 3.347216 GGGTGCAAAGATCTTGCTTCTA 58.653 45.455 22.12 7.21 45.13 2.10
771 798 2.421107 GGATAAAGAAACCTCCCCGTCC 60.421 54.545 0.00 0.00 0.00 4.79
773 800 1.208776 CGGATAAAGAAACCTCCCCGT 59.791 52.381 0.00 0.00 0.00 5.28
847 875 3.721851 CCGTTTTATACCGGCGGG 58.278 61.111 31.78 12.53 38.86 6.13
893 921 4.144703 GCCGTCCGTCCCTTCCTC 62.145 72.222 0.00 0.00 0.00 3.71
901 929 1.370172 CTACGCTATGCCGTCCGTC 60.370 63.158 0.00 0.00 42.20 4.79
947 976 4.838486 CGACCGGTCGCTGCTCTC 62.838 72.222 40.78 9.16 46.50 3.20
998 1027 1.956477 GATGGTGGTGGTAATCCATGC 59.044 52.381 0.00 0.00 46.20 4.06
1014 1043 2.360726 TGCTGCTGCTGGTGATGG 60.361 61.111 17.00 0.00 40.48 3.51
1015 1044 3.052620 GCTGCTGCTGCTGGTGATG 62.053 63.158 22.10 3.73 40.48 3.07
1016 1045 2.750637 GCTGCTGCTGCTGGTGAT 60.751 61.111 22.10 0.00 40.48 3.06
1017 1046 4.259131 TGCTGCTGCTGCTGGTGA 62.259 61.111 27.67 8.50 40.48 4.02
1018 1047 3.738246 CTGCTGCTGCTGCTGGTG 61.738 66.667 27.67 13.98 40.48 4.17
1019 1048 3.786884 AACTGCTGCTGCTGCTGGT 62.787 57.895 30.69 25.97 41.07 4.00
1020 1049 2.979197 GAACTGCTGCTGCTGCTGG 61.979 63.158 30.69 24.00 41.07 4.85
1021 1050 2.561885 GAACTGCTGCTGCTGCTG 59.438 61.111 27.75 27.75 41.07 4.41
1022 1051 2.672307 GGAACTGCTGCTGCTGCT 60.672 61.111 27.67 11.62 41.07 4.24
1023 1052 2.672307 AGGAACTGCTGCTGCTGC 60.672 61.111 22.51 22.51 41.07 5.25
1103 1147 0.894184 CTCCATGCCCATCTCCATGC 60.894 60.000 0.00 0.00 37.96 4.06
1105 1149 1.354705 CATCTCCATGCCCATCTCCAT 59.645 52.381 0.00 0.00 0.00 3.41
1106 1150 0.769247 CATCTCCATGCCCATCTCCA 59.231 55.000 0.00 0.00 0.00 3.86
1107 1151 0.037877 CCATCTCCATGCCCATCTCC 59.962 60.000 0.00 0.00 0.00 3.71
1108 1152 1.003349 CTCCATCTCCATGCCCATCTC 59.997 57.143 0.00 0.00 0.00 2.75
1109 1153 1.065647 CTCCATCTCCATGCCCATCT 58.934 55.000 0.00 0.00 0.00 2.90
1110 1154 1.062364 TCTCCATCTCCATGCCCATC 58.938 55.000 0.00 0.00 0.00 3.51
1111 1155 1.354705 CATCTCCATCTCCATGCCCAT 59.645 52.381 0.00 0.00 0.00 4.00
1112 1156 0.769247 CATCTCCATCTCCATGCCCA 59.231 55.000 0.00 0.00 0.00 5.36
1113 1157 0.037877 CCATCTCCATCTCCATGCCC 59.962 60.000 0.00 0.00 0.00 5.36
1114 1158 1.003349 CTCCATCTCCATCTCCATGCC 59.997 57.143 0.00 0.00 0.00 4.40
1115 1159 1.976404 TCTCCATCTCCATCTCCATGC 59.024 52.381 0.00 0.00 0.00 4.06
1116 1160 3.055021 CCATCTCCATCTCCATCTCCATG 60.055 52.174 0.00 0.00 0.00 3.66
1117 1161 3.181398 TCCATCTCCATCTCCATCTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
1118 1162 2.180751 TCCATCTCCATCTCCATCTCCA 59.819 50.000 0.00 0.00 0.00 3.86
1119 1163 2.833338 CTCCATCTCCATCTCCATCTCC 59.167 54.545 0.00 0.00 0.00 3.71
1120 1164 3.777087 TCTCCATCTCCATCTCCATCTC 58.223 50.000 0.00 0.00 0.00 2.75
1121 1165 3.919304 TCTCCATCTCCATCTCCATCT 57.081 47.619 0.00 0.00 0.00 2.90
1122 1166 3.198200 CCATCTCCATCTCCATCTCCATC 59.802 52.174 0.00 0.00 0.00 3.51
1123 1167 3.181398 TCCATCTCCATCTCCATCTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
1124 1168 2.180751 TCCATCTCCATCTCCATCTCCA 59.819 50.000 0.00 0.00 0.00 3.86
1125 1169 2.833338 CTCCATCTCCATCTCCATCTCC 59.167 54.545 0.00 0.00 0.00 3.71
1126 1170 3.777087 TCTCCATCTCCATCTCCATCTC 58.223 50.000 0.00 0.00 0.00 2.75
1127 1171 3.919304 TCTCCATCTCCATCTCCATCT 57.081 47.619 0.00 0.00 0.00 2.90
1128 1172 3.198200 CCATCTCCATCTCCATCTCCATC 59.802 52.174 0.00 0.00 0.00 3.51
1129 1173 3.181398 TCCATCTCCATCTCCATCTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
1130 1174 2.180751 TCCATCTCCATCTCCATCTCCA 59.819 50.000 0.00 0.00 0.00 3.86
1131 1175 2.833338 CTCCATCTCCATCTCCATCTCC 59.167 54.545 0.00 0.00 0.00 3.71
1132 1176 2.833338 CCTCCATCTCCATCTCCATCTC 59.167 54.545 0.00 0.00 0.00 2.75
1133 1177 2.453991 TCCTCCATCTCCATCTCCATCT 59.546 50.000 0.00 0.00 0.00 2.90
1134 1178 2.833338 CTCCTCCATCTCCATCTCCATC 59.167 54.545 0.00 0.00 0.00 3.51
1229 1273 3.006756 ATGGACTCCAGCGACCGTG 62.007 63.158 3.62 0.00 36.75 4.94
1515 1574 5.405873 GGATTAAGTACTATCGGCAAGAAGC 59.594 44.000 0.00 0.00 44.65 3.86
1518 1577 5.509163 GCTGGATTAAGTACTATCGGCAAGA 60.509 44.000 0.00 0.00 0.00 3.02
1519 1578 4.686554 GCTGGATTAAGTACTATCGGCAAG 59.313 45.833 0.00 0.00 0.00 4.01
1520 1579 4.344102 AGCTGGATTAAGTACTATCGGCAA 59.656 41.667 17.02 1.14 0.00 4.52
1521 1580 3.895656 AGCTGGATTAAGTACTATCGGCA 59.104 43.478 17.02 5.38 0.00 5.69
1522 1581 4.238514 CAGCTGGATTAAGTACTATCGGC 58.761 47.826 5.57 5.16 0.00 5.54
1523 1582 4.021894 AGCAGCTGGATTAAGTACTATCGG 60.022 45.833 17.12 0.00 0.00 4.18
1524 1583 5.127693 AGCAGCTGGATTAAGTACTATCG 57.872 43.478 17.12 0.00 0.00 2.92
1525 1584 7.596995 CAGTTAGCAGCTGGATTAAGTACTATC 59.403 40.741 17.12 0.00 0.00 2.08
1526 1585 7.437748 CAGTTAGCAGCTGGATTAAGTACTAT 58.562 38.462 17.12 0.00 0.00 2.12
1527 1586 6.806751 CAGTTAGCAGCTGGATTAAGTACTA 58.193 40.000 17.12 1.77 0.00 1.82
1528 1587 5.665459 CAGTTAGCAGCTGGATTAAGTACT 58.335 41.667 17.12 2.81 0.00 2.73
1529 1588 5.975410 CAGTTAGCAGCTGGATTAAGTAC 57.025 43.478 17.12 0.00 0.00 2.73
1673 1734 2.820767 CTTGTCGTCGTCCAGCTCCC 62.821 65.000 0.00 0.00 0.00 4.30
1903 1976 5.024118 ACATGTATATACTACTCCAGGGCC 58.976 45.833 13.89 0.00 0.00 5.80
1907 1980 9.464714 GTTCACAACATGTATATACTACTCCAG 57.535 37.037 13.89 0.84 0.00 3.86
1994 2151 2.867624 CATGTATCCCCAACCAGATGG 58.132 52.381 0.00 0.00 40.35 3.51
2015 2172 4.194720 CCCCGTTCGCCTCTCTCG 62.195 72.222 0.00 0.00 0.00 4.04
2016 2173 3.839432 CCCCCGTTCGCCTCTCTC 61.839 72.222 0.00 0.00 0.00 3.20
2085 2257 2.771943 TGGTTTCAGGTCACTTCTCTGT 59.228 45.455 0.00 0.00 0.00 3.41
2086 2260 3.475566 TGGTTTCAGGTCACTTCTCTG 57.524 47.619 0.00 0.00 0.00 3.35
2137 2318 3.316308 ACATTTTAGCAGCATCCGAATCC 59.684 43.478 0.00 0.00 0.00 3.01
2163 2344 5.606348 ACTCCACCAATGATCTCTAACTC 57.394 43.478 0.00 0.00 0.00 3.01
2165 2346 5.163713 GCAAACTCCACCAATGATCTCTAAC 60.164 44.000 0.00 0.00 0.00 2.34
2181 2655 2.157738 AGAACAGCTGATGCAAACTCC 58.842 47.619 23.35 0.00 42.74 3.85
2214 2688 2.238521 ACATTTGAATTCACAGCGGGT 58.761 42.857 7.89 0.00 0.00 5.28
2241 2715 6.680148 TTATCAATTGATGGATCGGTCCTA 57.320 37.500 27.59 2.50 45.32 2.94
2246 2720 9.435688 TTGTAGTATTATCAATTGATGGATCGG 57.564 33.333 27.59 0.00 36.05 4.18
2264 2738 9.726438 AAGTTGAGAAGCAGTATTTTGTAGTAT 57.274 29.630 0.00 0.00 0.00 2.12
2294 2768 0.179100 CCGATGCTCCACACGAGATT 60.179 55.000 0.00 0.00 41.63 2.40
2299 2773 2.557059 TACTGCCGATGCTCCACACG 62.557 60.000 0.00 0.00 38.71 4.49
2304 2778 0.530870 GAACCTACTGCCGATGCTCC 60.531 60.000 0.00 0.00 38.71 4.70
2336 2810 3.915437 AACCATGATGAACGTTTGGAC 57.085 42.857 20.08 0.51 0.00 4.02
2365 2839 3.487544 GGGCTGCAGAAAGTTAATTAGCG 60.488 47.826 20.43 0.00 0.00 4.26
2387 2981 9.409949 CGTTAATGTTAAGATTTTCTAGAAGCG 57.590 33.333 5.12 0.00 0.00 4.68
2400 3031 7.539366 GTGCAATTTTAGGCGTTAATGTTAAGA 59.461 33.333 0.00 0.00 0.00 2.10
2428 3059 6.038936 TCCTCTAAAGTTGCACACCTTAAAAC 59.961 38.462 0.00 0.00 0.00 2.43
2434 3065 3.857157 TTCCTCTAAAGTTGCACACCT 57.143 42.857 0.00 0.00 0.00 4.00
2489 3130 7.231467 TCAGGCTTTAACCAAACTTATCTCTT 58.769 34.615 0.00 0.00 0.00 2.85
2537 3178 6.302313 CGGTTGTCTTAACTTTGCTTAAATCG 59.698 38.462 0.00 0.00 0.00 3.34
2568 3209 3.456644 TCCAATTAAGCGAGGGGTATCAA 59.543 43.478 0.00 0.00 0.00 2.57
2570 3211 3.071167 ACTCCAATTAAGCGAGGGGTATC 59.929 47.826 0.00 0.00 31.77 2.24
2577 3218 5.613358 AGTTTGAACTCCAATTAAGCGAG 57.387 39.130 0.00 0.00 32.86 5.03
2581 3222 9.586435 AAGTTGAAAGTTTGAACTCCAATTAAG 57.414 29.630 18.88 0.00 38.57 1.85
2588 3229 7.883229 TCAAAAAGTTGAAAGTTTGAACTCC 57.117 32.000 18.88 0.00 40.87 3.85
2598 3242 9.311916 TCAACATACCAATCAAAAAGTTGAAAG 57.688 29.630 0.00 0.00 46.66 2.62
2602 3246 9.044150 ACAATCAACATACCAATCAAAAAGTTG 57.956 29.630 0.00 0.00 37.15 3.16
2621 3265 5.476599 CCTTGGGTGATTCACTAACAATCAA 59.523 40.000 16.02 8.63 40.99 2.57
2623 3267 4.399303 CCCTTGGGTGATTCACTAACAATC 59.601 45.833 16.02 0.00 34.40 2.67
2639 3283 1.608801 GCAGCATGTTTTTCCCTTGGG 60.609 52.381 0.00 0.00 39.31 4.12
2642 3286 6.155049 ACATATTAGCAGCATGTTTTTCCCTT 59.845 34.615 0.00 0.00 39.31 3.95
2643 3287 5.658190 ACATATTAGCAGCATGTTTTTCCCT 59.342 36.000 0.00 0.00 39.31 4.20
2645 3289 7.832503 AAACATATTAGCAGCATGTTTTTCC 57.167 32.000 13.30 0.00 45.78 3.13
2708 3353 2.693591 CGCTAGAGTTCCCCTAACATCA 59.306 50.000 0.00 0.00 40.83 3.07
2709 3354 2.036089 CCGCTAGAGTTCCCCTAACATC 59.964 54.545 0.00 0.00 40.83 3.06
2719 3364 3.143211 TCTAGGGATCCGCTAGAGTTC 57.857 52.381 24.82 3.91 46.22 3.01
2729 3374 3.622166 TGAACCGTTTTCTAGGGATCC 57.378 47.619 1.92 1.92 33.88 3.36
2737 3382 4.714632 TCTTGAGGAATGAACCGTTTTCT 58.285 39.130 0.00 0.00 34.73 2.52
2738 3383 5.629079 ATCTTGAGGAATGAACCGTTTTC 57.371 39.130 0.00 0.00 34.73 2.29
2743 3388 6.520272 AGAGAATATCTTGAGGAATGAACCG 58.480 40.000 0.00 0.00 32.99 4.44
2769 3414 2.386661 AGGTGCAGTTAATGTCTCGG 57.613 50.000 0.00 0.00 0.00 4.63
2771 3416 4.130286 AGCTAGGTGCAGTTAATGTCTC 57.870 45.455 0.00 0.00 45.94 3.36
2774 3419 5.805728 AGTTTAGCTAGGTGCAGTTAATGT 58.194 37.500 4.27 0.00 45.94 2.71
2776 3421 6.712276 AGAAGTTTAGCTAGGTGCAGTTAAT 58.288 36.000 4.27 0.00 45.94 1.40
2790 3435 4.946445 AGTTAGCCGGATAGAAGTTTAGC 58.054 43.478 5.05 0.00 0.00 3.09
2791 3436 5.302313 AGGAGTTAGCCGGATAGAAGTTTAG 59.698 44.000 5.05 0.00 0.00 1.85
2792 3437 5.206587 AGGAGTTAGCCGGATAGAAGTTTA 58.793 41.667 5.05 0.00 0.00 2.01
2829 3475 4.691326 TGGGAATTTGTTTGGGTTAACC 57.309 40.909 16.85 16.85 40.81 2.85
2844 3490 5.072329 TCTCAAAACTGAGAGAGTTGGGAAT 59.928 40.000 0.68 0.00 44.68 3.01
2845 3491 4.408921 TCTCAAAACTGAGAGAGTTGGGAA 59.591 41.667 0.68 0.00 44.68 3.97
2865 3511 3.526534 GTGTGAACTTATGAGGCCTCTC 58.473 50.000 32.28 20.54 40.36 3.20
2885 3531 9.343539 GCTGAAAGTAGAAGGAATATTATTGGT 57.656 33.333 0.00 0.00 35.30 3.67
2895 3541 8.739972 GGAATATTTTGCTGAAAGTAGAAGGAA 58.260 33.333 0.00 0.00 35.30 3.36
2906 3552 7.337942 GGAGAGAAGAAGGAATATTTTGCTGAA 59.662 37.037 0.00 0.00 33.29 3.02
2934 3580 0.687354 AAGGAGGAAGTGTCGTGCAT 59.313 50.000 0.00 0.00 32.87 3.96
2943 3589 0.036875 CAAAGGCGGAAGGAGGAAGT 59.963 55.000 0.00 0.00 0.00 3.01
2945 3591 0.476771 AACAAAGGCGGAAGGAGGAA 59.523 50.000 0.00 0.00 0.00 3.36
2961 3607 2.405717 CGATGGCGATATGTGGCAACA 61.406 52.381 0.00 0.00 45.55 3.33
2964 3610 1.960763 GCGATGGCGATATGTGGCA 60.961 57.895 0.00 3.64 46.52 4.92
2971 3617 2.280119 GTGGCTGCGATGGCGATA 60.280 61.111 0.00 0.00 44.10 2.92
2974 3620 4.529219 TAGGTGGCTGCGATGGCG 62.529 66.667 0.00 0.00 44.10 5.69
2977 3623 1.815421 GTGGTAGGTGGCTGCGATG 60.815 63.158 0.00 0.00 0.00 3.84
2979 3625 3.702048 GGTGGTAGGTGGCTGCGA 61.702 66.667 0.00 0.00 0.00 5.10
2981 3627 0.107654 CTAAGGTGGTAGGTGGCTGC 60.108 60.000 0.00 0.00 0.00 5.25
2985 3631 2.172717 CCATTCCTAAGGTGGTAGGTGG 59.827 54.545 0.00 0.00 41.40 4.61
2990 3636 2.848071 GGGTTCCATTCCTAAGGTGGTA 59.152 50.000 0.00 0.00 34.61 3.25
2991 3637 1.639108 GGGTTCCATTCCTAAGGTGGT 59.361 52.381 0.00 0.00 34.61 4.16
2999 3645 1.614241 CGACCGAGGGTTCCATTCCT 61.614 60.000 0.00 0.00 35.25 3.36
3006 3652 4.144703 GGAGGCGACCGAGGGTTC 62.145 72.222 0.00 0.00 35.25 3.62
3010 3656 4.436998 GTGTGGAGGCGACCGAGG 62.437 72.222 0.00 0.00 0.00 4.63
3011 3657 4.436998 GGTGTGGAGGCGACCGAG 62.437 72.222 0.00 0.00 0.00 4.63
3046 3692 3.615536 AATCTTTGTGCGCGGCAGC 62.616 57.895 8.83 0.00 40.08 5.25
3047 3693 1.081242 AAATCTTTGTGCGCGGCAG 60.081 52.632 8.83 0.00 40.08 4.85
3048 3694 1.371512 CAAATCTTTGTGCGCGGCA 60.372 52.632 8.83 3.20 35.60 5.69
3049 3695 2.088178 CCAAATCTTTGTGCGCGGC 61.088 57.895 8.83 0.00 36.45 6.53
3050 3696 0.318614 AACCAAATCTTTGTGCGCGG 60.319 50.000 8.83 0.00 36.45 6.46
3051 3697 0.777631 CAACCAAATCTTTGTGCGCG 59.222 50.000 0.00 0.00 36.45 6.86
3052 3698 1.139163 CCAACCAAATCTTTGTGCGC 58.861 50.000 0.00 0.00 36.45 6.09
3053 3699 2.664916 CTCCAACCAAATCTTTGTGCG 58.335 47.619 2.29 0.00 36.45 5.34
3054 3700 2.036346 AGCTCCAACCAAATCTTTGTGC 59.964 45.455 2.29 0.00 36.45 4.57
3055 3701 3.068590 ACAGCTCCAACCAAATCTTTGTG 59.931 43.478 2.29 0.00 36.45 3.33
3056 3702 3.068590 CACAGCTCCAACCAAATCTTTGT 59.931 43.478 2.29 0.00 36.45 2.83
3057 3703 3.553508 CCACAGCTCCAACCAAATCTTTG 60.554 47.826 0.00 0.00 37.90 2.77
3058 3704 2.629617 CCACAGCTCCAACCAAATCTTT 59.370 45.455 0.00 0.00 0.00 2.52
3059 3705 2.242043 CCACAGCTCCAACCAAATCTT 58.758 47.619 0.00 0.00 0.00 2.40
3060 3706 1.915141 CCACAGCTCCAACCAAATCT 58.085 50.000 0.00 0.00 0.00 2.40
3061 3707 0.244721 GCCACAGCTCCAACCAAATC 59.755 55.000 0.00 0.00 35.50 2.17
3062 3708 0.469705 TGCCACAGCTCCAACCAAAT 60.470 50.000 0.00 0.00 40.80 2.32
3063 3709 1.076412 TGCCACAGCTCCAACCAAA 60.076 52.632 0.00 0.00 40.80 3.28
3064 3710 1.529010 CTGCCACAGCTCCAACCAA 60.529 57.895 0.00 0.00 40.80 3.67
3065 3711 1.782201 ATCTGCCACAGCTCCAACCA 61.782 55.000 0.00 0.00 40.80 3.67
3066 3712 0.610232 AATCTGCCACAGCTCCAACC 60.610 55.000 0.00 0.00 40.80 3.77
3067 3713 1.068055 CAAATCTGCCACAGCTCCAAC 60.068 52.381 0.00 0.00 40.80 3.77
3068 3714 1.202915 TCAAATCTGCCACAGCTCCAA 60.203 47.619 0.00 0.00 40.80 3.53
3069 3715 0.401356 TCAAATCTGCCACAGCTCCA 59.599 50.000 0.00 0.00 40.80 3.86
3070 3716 0.807496 GTCAAATCTGCCACAGCTCC 59.193 55.000 0.00 0.00 40.80 4.70
3071 3717 0.807496 GGTCAAATCTGCCACAGCTC 59.193 55.000 0.00 0.00 40.80 4.09
3072 3718 0.957395 CGGTCAAATCTGCCACAGCT 60.957 55.000 0.00 0.00 40.80 4.24
3073 3719 0.955428 TCGGTCAAATCTGCCACAGC 60.955 55.000 0.00 0.00 40.48 4.40
3074 3720 1.667724 GATCGGTCAAATCTGCCACAG 59.332 52.381 0.00 0.00 0.00 3.66
3075 3721 1.278985 AGATCGGTCAAATCTGCCACA 59.721 47.619 0.00 0.00 32.27 4.17
3076 3722 1.667724 CAGATCGGTCAAATCTGCCAC 59.332 52.381 0.00 0.00 42.54 5.01
3077 3723 2.028420 CAGATCGGTCAAATCTGCCA 57.972 50.000 0.00 0.00 42.54 4.92
3081 3727 1.645034 CACGCAGATCGGTCAAATCT 58.355 50.000 0.00 0.00 43.86 2.40
3082 3728 0.026803 GCACGCAGATCGGTCAAATC 59.973 55.000 0.00 0.00 43.86 2.17
3083 3729 0.391661 AGCACGCAGATCGGTCAAAT 60.392 50.000 0.00 0.00 43.86 2.32
3084 3730 1.005037 AGCACGCAGATCGGTCAAA 60.005 52.632 0.00 0.00 43.86 2.69
3085 3731 1.737735 CAGCACGCAGATCGGTCAA 60.738 57.895 0.00 0.00 43.86 3.18
3086 3732 2.125952 CAGCACGCAGATCGGTCA 60.126 61.111 0.00 0.00 43.86 4.02
3087 3733 1.687494 GAACAGCACGCAGATCGGTC 61.687 60.000 0.00 0.00 43.86 4.79
3088 3734 1.738099 GAACAGCACGCAGATCGGT 60.738 57.895 0.00 0.00 43.86 4.69
3089 3735 1.446792 AGAACAGCACGCAGATCGG 60.447 57.895 0.00 0.00 43.86 4.18
3090 3736 1.690283 CCAGAACAGCACGCAGATCG 61.690 60.000 0.00 0.00 45.38 3.69
3091 3737 1.364626 CCCAGAACAGCACGCAGATC 61.365 60.000 0.00 0.00 0.00 2.75
3092 3738 1.376424 CCCAGAACAGCACGCAGAT 60.376 57.895 0.00 0.00 0.00 2.90
3093 3739 2.031012 CCCAGAACAGCACGCAGA 59.969 61.111 0.00 0.00 0.00 4.26
3094 3740 2.281070 ACCCAGAACAGCACGCAG 60.281 61.111 0.00 0.00 0.00 5.18
3095 3741 2.280797 GACCCAGAACAGCACGCA 60.281 61.111 0.00 0.00 0.00 5.24
3096 3742 3.050275 GGACCCAGAACAGCACGC 61.050 66.667 0.00 0.00 0.00 5.34
3097 3743 0.535102 AAAGGACCCAGAACAGCACG 60.535 55.000 0.00 0.00 0.00 5.34
3098 3744 0.954452 CAAAGGACCCAGAACAGCAC 59.046 55.000 0.00 0.00 0.00 4.40
3099 3745 0.550914 ACAAAGGACCCAGAACAGCA 59.449 50.000 0.00 0.00 0.00 4.41
3100 3746 1.239347 GACAAAGGACCCAGAACAGC 58.761 55.000 0.00 0.00 0.00 4.40
3101 3747 2.498167 CTGACAAAGGACCCAGAACAG 58.502 52.381 0.00 0.00 0.00 3.16
3102 3748 1.476833 GCTGACAAAGGACCCAGAACA 60.477 52.381 0.00 0.00 0.00 3.18
3103 3749 1.239347 GCTGACAAAGGACCCAGAAC 58.761 55.000 0.00 0.00 0.00 3.01
3104 3750 0.843309 TGCTGACAAAGGACCCAGAA 59.157 50.000 0.00 0.00 0.00 3.02
3105 3751 0.108585 GTGCTGACAAAGGACCCAGA 59.891 55.000 0.00 0.00 41.20 3.86
3106 3752 0.179020 TGTGCTGACAAAGGACCCAG 60.179 55.000 0.00 0.00 46.22 4.45
3107 3753 0.465460 GTGTGCTGACAAAGGACCCA 60.465 55.000 0.00 0.00 46.22 4.51
3108 3754 1.507141 CGTGTGCTGACAAAGGACCC 61.507 60.000 0.00 0.00 46.22 4.46
3109 3755 0.531974 TCGTGTGCTGACAAAGGACC 60.532 55.000 0.00 0.00 46.22 4.46
3110 3756 0.861837 CTCGTGTGCTGACAAAGGAC 59.138 55.000 0.00 0.00 46.91 3.85
3111 3757 0.464036 ACTCGTGTGCTGACAAAGGA 59.536 50.000 0.00 0.00 32.49 3.36
3112 3758 1.792949 GTACTCGTGTGCTGACAAAGG 59.207 52.381 0.00 0.00 32.49 3.11
3113 3759 1.792949 GGTACTCGTGTGCTGACAAAG 59.207 52.381 5.71 0.00 32.49 2.77
3114 3760 1.411246 AGGTACTCGTGTGCTGACAAA 59.589 47.619 5.71 0.00 32.49 2.83
3115 3761 1.037493 AGGTACTCGTGTGCTGACAA 58.963 50.000 5.71 0.00 32.49 3.18
3116 3762 0.313987 CAGGTACTCGTGTGCTGACA 59.686 55.000 5.71 0.00 34.60 3.58
3117 3763 0.388649 CCAGGTACTCGTGTGCTGAC 60.389 60.000 5.71 0.00 34.60 3.51
3118 3764 0.826256 ACCAGGTACTCGTGTGCTGA 60.826 55.000 5.71 0.00 34.60 4.26
3119 3765 0.667487 CACCAGGTACTCGTGTGCTG 60.667 60.000 5.71 2.81 42.54 4.41
3120 3766 1.666011 CACCAGGTACTCGTGTGCT 59.334 57.895 5.71 0.00 42.54 4.40
3121 3767 4.261888 CACCAGGTACTCGTGTGC 57.738 61.111 0.00 0.00 42.54 4.57
3125 3771 1.321474 TTTCGACACCAGGTACTCGT 58.679 50.000 15.44 0.00 34.60 4.18
3126 3772 2.427232 TTTTCGACACCAGGTACTCG 57.573 50.000 11.28 11.28 34.60 4.18
3127 3773 3.678548 GTGATTTTCGACACCAGGTACTC 59.321 47.826 0.00 0.00 34.60 2.59
3128 3774 3.660865 GTGATTTTCGACACCAGGTACT 58.339 45.455 0.00 0.00 43.88 2.73
3136 3782 0.165944 CTGCGGGTGATTTTCGACAC 59.834 55.000 0.00 0.00 36.44 3.67
3137 3783 1.573829 GCTGCGGGTGATTTTCGACA 61.574 55.000 0.00 0.00 0.00 4.35
3138 3784 1.134694 GCTGCGGGTGATTTTCGAC 59.865 57.895 0.00 0.00 0.00 4.20
3139 3785 0.886938 TTGCTGCGGGTGATTTTCGA 60.887 50.000 0.00 0.00 0.00 3.71
3140 3786 0.729140 GTTGCTGCGGGTGATTTTCG 60.729 55.000 0.00 0.00 0.00 3.46
3141 3787 0.729140 CGTTGCTGCGGGTGATTTTC 60.729 55.000 0.00 0.00 0.00 2.29
3142 3788 1.169661 TCGTTGCTGCGGGTGATTTT 61.170 50.000 0.00 0.00 0.00 1.82
3143 3789 1.599518 TCGTTGCTGCGGGTGATTT 60.600 52.632 0.00 0.00 0.00 2.17
3144 3790 2.031919 TCGTTGCTGCGGGTGATT 59.968 55.556 0.00 0.00 0.00 2.57
3145 3791 2.742372 GTCGTTGCTGCGGGTGAT 60.742 61.111 0.00 0.00 0.00 3.06
3146 3792 4.980805 GGTCGTTGCTGCGGGTGA 62.981 66.667 0.00 0.00 0.00 4.02
3148 3794 4.329545 ATGGTCGTTGCTGCGGGT 62.330 61.111 0.00 0.00 0.00 5.28
3149 3795 3.803082 CATGGTCGTTGCTGCGGG 61.803 66.667 0.00 0.00 0.00 6.13
3150 3796 3.803082 CCATGGTCGTTGCTGCGG 61.803 66.667 2.57 0.00 0.00 5.69
3151 3797 4.465512 GCCATGGTCGTTGCTGCG 62.466 66.667 14.67 0.00 0.00 5.18
3152 3798 3.332493 CTGCCATGGTCGTTGCTGC 62.332 63.158 14.67 0.00 0.00 5.25
3153 3799 2.872557 CTGCCATGGTCGTTGCTG 59.127 61.111 14.67 0.00 0.00 4.41
3154 3800 3.058160 GCTGCCATGGTCGTTGCT 61.058 61.111 14.67 0.00 0.00 3.91
3155 3801 4.465512 CGCTGCCATGGTCGTTGC 62.466 66.667 14.67 9.66 0.00 4.17
3156 3802 4.465512 GCGCTGCCATGGTCGTTG 62.466 66.667 14.67 1.15 0.00 4.10
3171 3817 4.129737 ATCCACCAGTCGACGGCG 62.130 66.667 21.23 2.87 39.35 6.46
3172 3818 2.509336 CATCCACCAGTCGACGGC 60.509 66.667 21.23 0.00 0.00 5.68
3173 3819 1.153823 GACATCCACCAGTCGACGG 60.154 63.158 20.16 20.16 0.00 4.79
3174 3820 1.153823 GGACATCCACCAGTCGACG 60.154 63.158 10.46 5.16 35.63 5.12
3175 3821 1.153823 CGGACATCCACCAGTCGAC 60.154 63.158 7.70 7.70 35.63 4.20
3176 3822 2.348104 CCGGACATCCACCAGTCGA 61.348 63.158 0.00 0.00 35.63 4.20
3177 3823 2.184322 CCGGACATCCACCAGTCG 59.816 66.667 0.00 0.00 35.63 4.18
3178 3824 3.388841 ACCGGACATCCACCAGTC 58.611 61.111 9.46 0.00 35.14 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.