>input_sequence_57889
--------------------------------------------------------------------------------
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--------------------------------------------------------------------ATGGATTACCAC
CACCATCACCAGCAGCAGCAG------------CAGTTCCTGATGCCTCCGCCGGCGTCGCTGCCGGC---GCAGCAGCA
GCTGTGCGCGCCGATGATGGGCATGGGCATGGAGATGGGCATGGAGATGGAGATGGAGATGGAGATGGAGATGGAGGAGC
AGCTGTGCTTCGTGGGGAGGGGCGGCGGGGGTCGGGGGGCGGAGAGGAAGCGGCGGTTCACGGAGGAGCAGACACGGTCG
CTGGAGTCCATGTTCCACGCGCACCACGCCAAGCTGGAGCCCCGGGAGAAGGCGGAGCTGGCGCGCGAGCTGGGCCTGCA
GCCGCGCCAGGTGGCCATCTGGTTCCAGAACAAGCGCGCGCGGTGGCGCTCCAAGCAGCTGGAGCACGACTTCGCCGCCC
TCCGCGCCGACTACGACGCCCTCCACTCCCGCGTCGAGTCCCTCAAGCACGAGAAGCTCGCCCTCGCCGCACAGGTA---
------------GCTAATCTAATCGCTGCGCACGTATTCTTAATCTCTTCTTGGCTTCTTGCCGATAGTACTTAATCCAG
CTGCTAACTGGAG--TACGTACGTACGTGTGTGCAGTTGCAGGAGCTGAGCGAGAGGCTGAGGGAGAGGGACGGCGGCGG
CGGTGGCGCGGCGACCGCCACCGCCAGCAGCAGCAGCTGCAACGGAGGCGGCCGGGAGCTGGACGACGACAAGAGGAACG
TCGTCG------------ACGTCGAGCCCCCCGAGAGCTGCGTGCTCGGCGGGACGGCGTGCGGCACGCCGGCGGACGTC
TCGGCGTCGGTGGAGTCCGAGTGCGACGACCACCTCCACTACGACGGGGCGGTCTTCCCGGAGTCCTTCTGCGCCACGCC
GGAGCTGTGGGAGCCGTGGCCGTGGCCGCCCGTCGAGTGGAACGCGGTGGCTTGAGGCCCTGGAGTAGTATATACATGTT
GTGAAC--------------------------------------------------------------------------
----------CCACGTAGGCGGCTTGTGTGTGTAGCTTCACGTACGTACGTGCATGTTGTGCTCGATTTCCCATCTGGTT
GGGGATACATGCGAG---------AGAGGCGAACGGGGGCGCGGCAATGACGGGTGGGTCCGTG------TAAGACAGAG
GGTGATGCACCTGAATA--CAGAGAAGTGACC-------TGAAACCATGGAGGCGACCGCCCAGCCAATGGGATCAGGGA
TTCGGATGCTGCTAAAATGTTGCGAGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TAGAGATCATTGGTGGAGTTTGCATCAGC---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-
>chr2A_1_TraesCS2A01G389400
CCTTCCTCTCTCTCTCTCTTTTTTCTTTCTTTTTTTGACATGGTGATGTCCCTTCCTGGTAAACGATCAATCGAGTGGTA
AACTGGGAGTAGTAGTAGAACGCACAGAGGCGCCAGGCGACAACAGGCGACAAGACCCGCCAACGCGCTAGCTGAGTGGC
GTGCTGCGTGCATCGGCCCGGCGAACGGGACAAACGCGGCGCGCCACCTCGACGCCCCTTCCGGCGGAAGCCCCCGCACA
CCTGGCGCCGCGACGGCGACGCGTGCAGCCCCCCGACGGA-------------GCGCGCACGGCCATTGGTCCTACCTGT
TCCTCCTCCCGCGCCCGTCCCCGTCTCCCCGTGGAACACCAAGGCGCACACCTTTCCACCACCCATTGGCCGGCAAGCCC
GCCCCATGATACACCACCGGAGTAGTACTACGTAGTGCTGATCCTTTCCCGTGCAGCCGATCGATCGATTCGT-------
-AGTAGATGAAAATGCAAGAGGTTCCGTGGCGTGGACAGACAGACATAGGCAGAGAGAAATAAACGAATGAAAATTACTC
GTCCGGTAGAGGC-----TTGCAATTCGTAGGCCGGAAGGAAGCCTTGAGTGAGCGGAAGGAGGAGGAGTAGAAGCAAGA
TCTTTGCACCCGTGGCCACGTTTCGGGTGCCGATCTCGAGGCGGGAGGATAGACATGGGGGCGCCGTGGTGGGCGCAGCC
TCTGGCGCCGCTGGATCCGCGACACTTGGCCCGGGGCGCGAAAGCGGCTTTCGCGCGGTGTCAGGCCGCGTGGGCCCGGA
-CGGGGAGGTTTCTTTATCCGCCGTCGCGAAGACCACATGTTCGCGTCTCGCGCAGCGCGGACACGTAACGCCGCCCGCC
GGTATAAAACGGGCCTCCCGGCGCCGAGAGACAGAGGAAGGAGGAAGGGACGGACGGCATAGCGTAGGGAGGGGATCCAT
CCAGCAGAG-CAGAGGAGAGCAGCGACCGGTCGGAGCAGAGCAGTGGCGGCCCACTGGGTCGGTCGGCATGGATTACCAC
CACCATCACCAGCAGCAGCAG------------CAGTTCCTGATGCCTCCGCCGGCGTCGCTGCCGGC---GCAGCAGCA
GCTGTGCGCGCCGATGATGGGCATGGGCATGGAGATGGGCATGGAGATGGAGATGGAGATGGAGATGGAGATGGAGGAGC
AGCTGTGCTTCGTGGGGAGGGGCGGCGGGGGTCGGGGGGCGGAGAGGAAGCGGCGGTTCACGGAGGAGCAGACACGGTCG
CTGGAGTCCATGTTCCACGCGCACCACGCCAAGCTGGAGCCCCGGGAGAAGGCGGAGCTGGCGCGCGAGCTGGGCCTGCA
GCCGCGCCAGGTGGCCATCTGGTTCCAGAACAAGCGCGCGCGGTGGCGCTCCAAGCAGCTGGAGCACGACTTCGCCGCCC
TCCGCGCCGACTACGACGCCCTCCACTCCCGCGTCGAGTCCCTCAAGCACGAGAAGCTCGCCCTCGCCGCACAGGTA---
------------GCTAATCTAATCGCTGCGCACGTATTCTTAATCTCTTCTTGGCTTCTTGCCGATAGTACTTAATCCAG
CTGCTAACTGGAG--TACGTACGTACGTGTGTGCAGTTGCAGGAGCTGAGCGAGAGGCTGAGGGAGAGGGACGGCGGCGG
CGGTGGCGCGGCGACCGCCACCGCCAGCAGCAGCAGCTGCAACGGAGGCGGCCGGGAGCTGGACGACGACAAGAGGAACG
TCGTCG------------ACGTCGAGCCCCCCGAGAGCTGCGTGCTCGGCGGGACGGCGTGCGGCACGCCGGCGGACGTC
TCGGCGTCGGTGGAGTCCGAGTGCGACGACCACCTCCACTACGACGGGGCGGTCTTCCCGGAGTCCTTCTGCGCCACGCC
GGAGCTGTGGGAGCCGTGGCCGTGGCCGCCCGTCGAGTGGAACGCGGTGGCTTGAGGCCCTGGAGTAGTATATACATGTT
GTGAAC--------------------------------------------------------------------------
----------CCACGTAGGCGGCTTGTGTGTGTAGCTTCACGTACGTACGTGCATGTTGTGCTCGATTTCCCATCTGGTT
GGGGATACATGCGAG---------AGAGGCGAACGGGGGCGCGGCAATGACGGGTGGGTCCGTG------TAAGACAGAG
GGTGATGCACCTGAATA--CAGAGAAGTGACC-------TGAAACCATGGAGGCGACCGCCCAGCCAATGGGATCAGGGA
TTCGGATGCTGCTAAAATGTTGCGAGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TAGAGATCATTGGTGGAGTTTGCATCAGCTGTTCTGTTTGTTGTTGCACCCGCTGTGAATTCAAATGTTGGAGGTAGGAC
CGATCCATCAATTGATAATACTACAAAATACTGCTTCTCAACTTTAGAATCTCGTGTGGAGCATCGGCAGTAGGTTCTTG
TCTAGGATTGTCCAAACGTTCATCATGGTTAGCCGTTTCGCTAAT-----------------------------------
--------------------------------------------------------------------------------
-----TAACTTTCTGCAGCCCGCTTCTAG------------------------------------AAAA-TCTTAACATT
AACGCCTAAAATTGCACTGTTTTAAGGTGTGCAACTTTAGAGGAAATTTGGTACAATATGTGGTT----------ATATA
GATCGACTTAAGAGATAAGTTTGGTTAAAGCCTGATTCAAAACCTAAGAAATGTGACCGATTTAAGCAAAGTTAAGACAA
CCGATGAATTGATACCCCTCGCTTAATTGGAGTTC---AAACTTTCAACTTTTTGATTGGTATGTTGATTGTTAGTGAAT
CACCCAAGGG-AAAAACATGCTGCTAATATGTTTTCCTTTACTCTTGCTCCCAATTTTATTTTATTTTTTGCTGATGTTA
GGGGAACTCTAGCGGATCCCTAGAAAACGGTTCATTCCTCAAGATATTCTCTTCCGAGACATTAACTGCACCTAGCTAAA
CTTCTATCCGGCTAACTCCT-AAAAAAGTTGAGGGGTTAACCCAAACAAATTCCCAACTCTCTCAGTTTTGAGAGGCCTC
ATAAGTTCACACCAATAATATTCCTTCTACTTTCAGCAAAATATTCCTTCTTCTCTCCCATGCACGACACTTCCTCCTTC
CGCCTTTGTTGCCACATATCGCCATCGCAGCCACCTACCACCTTAGGAATGGAACCCTCGGTCGCCTCCACACCCCGGCG
TCGACGCCCGTGCTGCCGCGCACAAAGATTTGGTTGGAGCTGTGGCAGATTTGACCGATCTGCGTGCTGTTCTGGGTCCT
TTGTCAGCACACGAGTACCTGGTGTCGAAAATCACCCGCAGCAACGACCATGGCAGCGCCGTCGACTGGTGGATGTCCGG
T
>chr2D_176
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GCCCGGCGAACGGGACAAACGCGGCGCGCCACCTCGACGCCCCTTCCGGCGGAAGCCCCCGCACA
CCTGGCGCCGCGACGGCGACGCGTGCAGCCCCCGACGGAGC-------------CGCGCACGGCCATTGGTCCTACCTGT
TCCTCCCCCCGCGCCCGTCCCCGTCTCCCCGTGGAACACCAAGGCGCACACCTTTCCACCACCCATTGGCGGGCAAGCCC
GCCCCATGATACACTACCGGAGTAGTACTACGTAGTGCTGATCCTTTCTCGTGCAGCCGATCGATCGGTTCGT-------
--GTACATGAAAACGCGAGAAGTGGACAG----------------------ACAGAGAAGAAAATAAACGAAAAGAACAC
GTCTGGTCGACTTATAATTTGCAATCCGTAGGCCGGAAGGAAGCCTTGAATGAGCGGGAGGAGGAGG---AGAAGCAAGA
TCTTTGCACCCGTGGCCACGTTTCGGGTGCGGATCTCGAGGCGGGAGGATAGACATGGGGGCGCCGTGGTGGGCACAGCC
TCTGGCGCCGCTGGATCCGCGACACTTGGCCCGGGGCACGAAAGCGGCTTTCGCTCGGTGTCAGGCCGCGTGGGCCCCGG
GCGGGGAGGTTTCTTTATCCGCCGTCGCGAAGACCACATGTTCGCATCTCGCGCAACGCGGACACGTAACGCCGTCCGCC
GGTATAAAACGGGCCTCCCGGCGCCGAGAGGCAGAGGAAG-AGGAAGGAACGGACGGCATAGCGTAGGGAGGGGATCCAT
CCAACAGAG-CAGAGCAGAGTAGCGACCGGTCGGAGCAGAGCAGT---GGCCCACCGGGTCGGTTGACATGGATTACCAC
CA------------GCAGCAG------------CAGTTCCTGATGCCCCCGCCCGCGTCGCTGCCGGCGCAGCAGCAGCA
GCTGTGCGCGCCGATGATGGGCATGGAC------------------------------ATGGAGATGGAGATGGAGGAGC
AGCTGTGCTTCGTGGGGAGGGGCGGCGGGGGTCGTGGGGCGGAGAGGAAGCGGCGGTTCACGGAGGAGCAGATACGGTCG
CTGGAGTCCATGTTCCACGCGCACCACGCCAAGCTGGAGCCCCGGGAGAAGGCGGAGCTGGCGCGCGAGCTGGGCCTGCA
GCCGCGCCAGGTGGCCATCTGGTTCCAGAACAAGCGCGCGCGGTGGCGCTCCAAGCAGCTGGAGCACGACTTCGCCGCCC
TCCGCGCCGACTACGACGCCCTCCACTCCCGCGTCGAGTCGCTCAAGCAAGAGAAGCTCGCCCTCGCCGCACAGGTAAAT
ATATCCGGCAAAG-----CTAATCGCTTCGCGCGTATTCTTAATTTGATCTTCCCGA-----------TACTTAATCCAG
CTGCTAACTG-----TACGTACGTACGTGTGTGCAGTTGCACGAGCTGAGCGAGAGGCTGAGGGAGAGGGACGGCGGCGG
CGGTGG---------CGCCACCGCCAGCAGCAGCAGCTGCAACGGAGGCGGCCAGGAGCTGGACGACGACAAGAGGAACG
TCGTCGCCGGGTGCGTCGACGTCGAGCCCCCAGAGAGCTGCGTGCTCGGCGGGACGGCGTGCGCCACGCCGGCGGACGTC
TCGGCGTCGGTGGAGTCCGAGTGCGACGACCACCTCCGCTACGACGGGGCGGTCTTCCCGGAGTCCTTCTGCGCCACGCC
GGAGCTGTGGGAGCCGTGGCCGTGGCCGCCCGTCGAGTGGAACGCGGTGGCTTGAAGCCGCGGAGTAGTATATACATGTT
GTGAAC--------------------------------------------------------------------------
----------CCACGTAGGCGGCTTGTGTGTGTAGCTTCACGTACGT----GCATGTTGTGCTCGATTTCTCATCTGGCT
GGGGATACATGT--G---------AGAGGCGAACGGGGACGCGGCAATGTCGGGTGGGTCCGTGTGAATGTAAGATAGAG
GATGATGCACCTGAATCGAAAGAGAAGTGACCGAAGTGATGAAACCATGGAGGCGACCACCCAGCCAATGGGATCAGTGA
TTCGGATGCTGCTAAAATGTTGCCACTTT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TAG
TAGAGATCATTGGTAGAGTTTGCATCAGCTCTTCTGTTTGTCGTTGCTCCCGCTGTGAATTCAAGTGTTGGAGGCAGGAT
CGATCCATCAATTGATAGTAATATAAAATACTGCTTCTCAATTTTAGGATCTTGCGTAGAGCATCGGCAGTAGGTTCTTG
TCTAGGAGTCTCCAAACGTTCATCATGGTTAGCCGTTTTGCTAAT-----------------------------------
--------------------------------------------------------------------------------
-----TAACTTTCTGCAGCCTGCTTTTAG------------------------------------AAAAAACTTAACATT
AACGCCTGAAATTGCACTATTTTAGGGTGTGCAACTTTAGACAAAATTTGCTACAATATGTGTTTTGTAGGTTATATGTA
GATCGACTT-AGAGATAAGTTTGGTTAAAGCCTGATTCAAAACCAAAGAAATGTGACTGATTTAAGCAAAGTTCAGACAC
CG-----------ACCCATCGTTTAATTTGAGTTC---AAATTTCAACGGTTTTGATTGGTTTGCTAATTGTTAGTAAAT
CATCCTGGAAAAACAACATGTTGCTATTATGTTTTCCGTCACTTTTGCTTCTAAT---------TTTTTTGCAAATGTTA
GGGCAACACTAGTCGGTCCCTCAAAAAGGGTTAACTACTCAAAATATCCTCTTTCAAGGAGTTAACTGCACCTAAACAAA
CTCCTATCCGGCTAACTCCT-AAAAAATTTCAGGAGTTAAGCCCAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr2B_176
GCCCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GAACGGGACAAACGCGGCGCGCCACCTCGACGCCCCTTCCGGCGGAAGCCCCCGCACA
CCTGGCGCCGCGACGGCGACGCGTGCAGCCCCCGACGGAGCTAGGCCCTCTGGGCGCGCACGGCCATTGGTCCTACCTGT
TCCTCCTCG---GCCCGTCCCCGTCTCCCCGTGGAACACCAAGGCGCACACCTTTCCACCACCCATTGGCCGGCAAGCCC
----CATGATACACTACTGAGGACTGGG---GTACTGCTGATCCTTTCTCGTGCAGCTGATCGATCGATTCGTAGAATCG
TAGTACATGAAAATGCGAGAAGTGGACAG----------------------ACAGAGAAGAAAATAAACGAAAAGAACAC
GTCCGGTCGACTTA--ATTTGCAATTCGTAGGCCGGAAGGAAGACTTGAATGAGCAGGAGGAGGAGG---AGAAGCAAGA
TCTTTGCACTCGTGGCCACGTTTCGGGTGCCGATCTCGAGGCTGGAGGATAGACATGGGGGCGCCGTGGTGGGCACAGCT
TCTGGCGCCGCTGGATGCGCGACACTTGGCCTGGCGGACGAAAGCGGCTTT-GCGCGGTGTCAGGCTGCGTGGGTCCCGC
CC-GGGAGGTTTCTTTATCCGCCATCGCGAAGACCACATGTTCGCATCTCGCGCAACGCGGACACGTAACGCCGTCCGCC
GGTATAAAACCGGCCTCCCGGCGCCGAGAGACAGAGGAAG-----AGGAACGGACGGCATAGCGTAGGGAGGGGATCCAT
CCAGATCCAACAGAGCAGAGGAGCGACCGGTCGGAGCAGAGCAGT---GGCCCACTGGGTCCGTCGACATGGATTACCAC
CA------------GCAACACCAGCAGCAGCACCAGTTCCTGATGCCCCCGCCCGCGTCGCTGCCGGCGCAGCAGCAGCA
GCTGTGCGCGCCGATGATGGGCATTGAC------------------------------ATGGACATGGACATGGACGAGC
AGCTGTGCTTCATGGGGAGGGGCGGCGTGGGGAGGGGGGCGGAGAGGAAGCGGCGGTTCACGGAGGAGCAGATACGGTCA
CTGGAGTCCATGTTCCACGCGCACCACGCCAAGCTGGAGCCCCGGGAGAAGGCGGAGCTGGCGCGCGAGCTGGGCCTGCA
GCCGCGCCAGGTGGCCATCTGGTTCCAGAACAAGCGCGCGCGGTGGCGCTCCAAGCAGCTCGAGCACGACTTCGCCGCCC
TCCGCGCCGACTACGACGCCCTCCACTCCCGCGTCGAGTCCCTCAAGCAGGAGAAGCTCGCCCTCGCCGCACAGGTA---
------------G-----CTAATCGCTGCGCACGTATTCTTAATCTCTTCTTCCCTGTACT-------TACTTGATCCAG
CTGCTAACTGGAGTGTACGTACGTACGTGTGTGCAGTTGCACGAGCTGAGCGAGAGGCTGAGGCAGAGGGACGGCGGCAG
CGGTGGCGCGGCGACCGCCACCGCCAGCAGCAGCAGCTGCAACGGAGGCGGGCAGGAGCTGGACGACGACAAGAGGAACG
TCGTCGCCGGGTGCGTCGACGTCGAGCCCCCCGAGAGCTGCGTGCTCGGCGGGACGACGTGCGCCACGCCGGCGGACGTC
TCGGTGTCGGTGGAGTCGGAGTGCGACGACCACCTCCACTACGACGGGGCGGTCTTCCCGGAGTCCTTCTGCGCCACGCC
CGAGCTGTGGGAGCCGTGGCCGTGGCCGCCCGTCGAGTGGAACGCGGTGGCTTGAAGCCGTGTAGTGTATACTCCCTCCG
TCTCAAAATGTCTTAAGTTTAGTATAAATTTATACTAAAATTAGTACAAACTTGAGACACTTATTTTGAAACGGAAGGAG
TACATAATAACCACGTAGGCGGCTTGTGTGTGTAGCTTCACGTACGT----GCATGTTGTGCTCGATTTCTCATCTGGTT
GGGGTCTTGGGGATACATGTGAGAAGAGGCGAATGGGGACGCGGCAATGTCGGGTGGGTCCGTG------TAAGATAGAG
GGTGATGCACCTGGATC--AAGAGAAGTGACCGAAGTGAT-AAACCATGGAGGCGACCACCCAGCCAATGGGATCAGTGA
TTCGGATGCTGCTAAAAATGTTGTTAGTTACTCCCTCCGTTATCAAATACTCCCTCCGTCCGGAAATACTTGTCATCAAA
ATGAATAAAAGGGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCTTTTTATCCATTTTGATGACAAGTATTTTCG
GACGGAGGGAGTAGTATTTGTCTTTCTAGATATTACAACAAATGACTACATACAAAGCAAAATAAACGAATGTACATTCT
AAAATATGTTTAAATACATCTGTATGTTGTAACCATTTGAAATGTATAGAGAGACAAATATTTGGGAACGGAGGGAGTAG
TAGAGATCGTTGGTAGAGTTTGCATCAGCTGTTCTGTTTGTTGTTGCTCCCACTGTGAATTCAAATGTTGGAGGCAGGAT
CGATCGTTCAATTGATAGTAATATAAAATACTGCTTCTCAACTTTAGGATCTTGTGTAGAGCATCATCAGTAGGTTCTTG
TCTAGGATTCTCCAAACGATCATCATGGTTAGCCGTTTTGCTAGGTGATCTACGGATCTGGATGTAATTTTTATTTCTGG
TATTCGTTGTACTGCCATGATTGAAGATGAATAGATTGAAAGTTTTTCCGCAAAAAAAAACTTTTCGCATGTTCAAAAAA
AAAAATAACTTTCCGCAGCCTGCTTCTTTTTTTTTTAAAAAAATTAACATTTATTTGCAGGTTAAAAAA-ACTTAACATT
AGCGCCTAAAATTGCACTATTTTAGGGTGTGCAACTTTAGAGAAAAATTGATACAACATGTGGTTTATAGGTTATATATA
GTTCAACTT-AGAGATAAGTTTGGTTAAAGCCTGATTCAAAACCTAAGAAATGTGACTGATTTAAGCAAAGTTAAGACAA
CCGATGAAATAATACCCATCGTTTTATATTGAAGTTCAAACTTTCAATGTTTTTTAGTGGTATGCTAACTGTTAATGAAT
CATCCTGAAAAAACAACATGCTGCAAATATGTTTTCTTTTACTTTTGCTCCTAAA---------ATTTTCGCAAATGTTA
GGGAAACTCTGACTGATCCCTCAAAAATGGTTAACTCCTCAAAACATTCTCTTTTAAGGCGTTCACCGCAC-------AA
CTCCTATCCGGCTAACTTAAAAAAGAACATGAGGAGTTAACTGAAACAAGATCCCAACTCTCTCAGTTTTAAGAGGCCCC
ATAAGTTCACTCAAAAAATACTCCTTCTACTCTCAGCAAAATATTCCTTCTTCTCTCCCGTGCACGACGCCTCCTCCTTC
TGCCTTCGTCGCCACAAATTGCTACCACAGTCACCGTCCACCTTGGGAATGAAC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
---------------------------------SSSS-SS----------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------S-------------------------------
-----S----------S---S--SSSSS-SSSSSSSSSSSSSSSSSSSSSS-S------SS---SS--S-----SS--S-
-------S--SSS------------------------------------S-------S---------SSS----------
--------------------------------------------------------------------------S-----
-------------------------------------S---------------------------------------S-S
---------------------------------------------S---------S------------------S-----
----------------------------------------S-------S-------------------------------
---------------S----S------------------------SSS------------------S-------------
--SSSSSSSSSSSS---------------------------------S-----S--------------------------
--------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------SSSSS----------------------------------SS--SSSSSSSSSSSS------------
-----------------------------------------S--------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---S--------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSS-------------------S---------
-----------SSS------------------------S----------S-------------------------S----
----------------S--S--------------------------------------S------------------S--
-----------------------S-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S--------------------------------S--------------------------S----S
-----------------S--S--S-----------------------S----S----S----------------------
---------S----------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------------------------S---------
------------------S-----S-----------------S-------S-----------------------------
---------S-----------------------------------------------S----------------------
--------S-S------S---S------S------------S--SS-SS---------------S-S-------------
--S--SS-SS---S-----------------------------S-------S---SSSSSSSSS--------SS------
---S---------S-------SS----S----S-S-------S----------S-S--S-S-------------SSS---
--S------------------------S------S--------------SS-------------------S-------S-
----------S-S--S----S----------S---------------------------S--------S-S---------
S-----S--S------S--S--S-S-S---S----SS-------S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_60
----------------------------------------TGGTGATGTCCCTTCCTGGT--------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>reverse_1151
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GGAGATGGGCATGGAGATGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_1053
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTACCAC
CACCATCACCAGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_3589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------ACTTCCTCCTTC
CGCCTTTG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
