Multiple sequence alignment - TraesCS2A01G374400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G374400 chr2A 100.000 3258 0 0 1 3258 617443438 617440181 0.000000e+00 6017.0
1 TraesCS2A01G374400 chr2A 83.838 396 26 13 2398 2756 180100248 180100642 3.110000e-90 342.0
2 TraesCS2A01G374400 chr2A 90.952 210 15 2 2395 2600 65197183 65197392 2.480000e-71 279.0
3 TraesCS2A01G374400 chr2A 90.066 151 12 2 2609 2756 57461543 57461693 3.320000e-45 193.0
4 TraesCS2A01G374400 chr2A 88.333 60 5 2 30 87 612839283 612839224 1.620000e-08 71.3
5 TraesCS2A01G374400 chr2A 84.722 72 5 6 44 113 16012060 16012127 2.100000e-07 67.6
6 TraesCS2A01G374400 chr2D 91.162 1437 75 32 996 2401 474899756 474898341 0.000000e+00 1903.0
7 TraesCS2A01G374400 chr2D 95.652 253 11 0 2845 3097 474898226 474897974 1.090000e-109 407.0
8 TraesCS2A01G374400 chr2D 93.820 178 6 2 779 956 474899923 474899751 2.490000e-66 263.0
9 TraesCS2A01G374400 chr2B 89.093 926 51 23 708 1601 555855561 555854654 0.000000e+00 1105.0
10 TraesCS2A01G374400 chr2B 91.892 629 33 8 1680 2301 555854647 555854030 0.000000e+00 863.0
11 TraesCS2A01G374400 chr2B 95.652 253 11 0 2845 3097 555853830 555853578 1.090000e-109 407.0
12 TraesCS2A01G374400 chr2B 92.593 81 5 1 2322 2401 555854033 555853953 7.390000e-22 115.0
13 TraesCS2A01G374400 chr7A 83.960 505 57 14 210 710 696086325 696086809 2.290000e-126 462.0
14 TraesCS2A01G374400 chr7A 89.239 381 20 12 2400 2760 47937702 47937323 1.070000e-124 457.0
15 TraesCS2A01G374400 chr7A 89.252 214 18 3 2397 2605 663176134 663176347 2.490000e-66 263.0
16 TraesCS2A01G374400 chr7A 89.655 145 15 0 2616 2760 55368614 55368758 5.550000e-43 185.0
17 TraesCS2A01G374400 chr4A 91.905 210 13 2 2400 2605 626007214 626007005 1.140000e-74 291.0
18 TraesCS2A01G374400 chr4A 92.195 205 12 2 2400 2600 640181605 640181809 1.480000e-73 287.0
19 TraesCS2A01G374400 chr4A 89.671 213 17 3 2398 2605 164519225 164519437 1.930000e-67 267.0
20 TraesCS2A01G374400 chr4A 90.196 153 13 2 2609 2760 428261671 428261520 7.130000e-47 198.0
21 TraesCS2A01G374400 chr4A 90.845 142 12 1 2622 2763 6479810 6479670 4.290000e-44 189.0
22 TraesCS2A01G374400 chr5A 89.069 247 7 7 2396 2622 493182586 493182832 4.110000e-74 289.0
23 TraesCS2A01G374400 chr5A 91.787 207 15 2 2396 2600 95561797 95562003 1.480000e-73 287.0
24 TraesCS2A01G374400 chr5A 90.995 211 14 3 2400 2605 85777714 85777924 2.480000e-71 279.0
25 TraesCS2A01G374400 chr5A 91.489 141 12 0 2616 2756 680715802 680715942 9.220000e-46 195.0
26 TraesCS2A01G374400 chr1A 93.525 139 7 2 2624 2761 540414979 540414842 4.260000e-49 206.0
27 TraesCS2A01G374400 chrUn 90.071 141 14 0 2616 2756 1923034 1923174 2.000000e-42 183.0
28 TraesCS2A01G374400 chr7B 89.655 145 14 1 2616 2760 261997922 261998065 2.000000e-42 183.0
29 TraesCS2A01G374400 chr3D 76.978 139 30 2 2009 2146 134832171 134832308 9.690000e-11 78.7
30 TraesCS2A01G374400 chr3A 76.978 139 30 2 2009 2146 149565681 149565818 9.690000e-11 78.7
31 TraesCS2A01G374400 chr4D 97.222 36 1 0 2119 2154 499618404 499618369 9.760000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G374400 chr2A 617440181 617443438 3257 True 6017.000000 6017 100.000000 1 3258 1 chr2A.!!$R2 3257
1 TraesCS2A01G374400 chr2D 474897974 474899923 1949 True 857.666667 1903 93.544667 779 3097 3 chr2D.!!$R1 2318
2 TraesCS2A01G374400 chr2B 555853578 555855561 1983 True 622.500000 1105 92.307500 708 3097 4 chr2B.!!$R1 2389

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 532 0.104487 TCGACAAACACGCCCACTAA 59.896 50.0 0.0 0.0 0.0 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2465 2548 0.107654 GCTGGAGCAACTATTCCGGT 60.108 55.0 0.0 0.0 41.13 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.911788 AAGATAGAATCAATTAGTGACATTGGT 57.088 29.630 0.00 0.00 39.72 3.67
78 79 8.691661 ATCAATTAGTGACATTGGTATTACCC 57.308 34.615 10.37 0.00 39.72 3.69
79 80 7.867921 TCAATTAGTGACATTGGTATTACCCT 58.132 34.615 10.37 1.22 37.50 4.34
80 81 8.333235 TCAATTAGTGACATTGGTATTACCCTT 58.667 33.333 10.37 0.00 37.50 3.95
81 82 9.621629 CAATTAGTGACATTGGTATTACCCTTA 57.378 33.333 10.37 0.00 37.50 2.69
82 83 9.847224 AATTAGTGACATTGGTATTACCCTTAG 57.153 33.333 10.37 1.05 37.50 2.18
83 84 6.248569 AGTGACATTGGTATTACCCTTAGG 57.751 41.667 10.37 0.00 37.50 2.69
136 137 9.934190 AAACAAATGATTAAAAATCTTGCACAC 57.066 25.926 0.00 0.00 0.00 3.82
137 138 8.659925 ACAAATGATTAAAAATCTTGCACACA 57.340 26.923 0.00 0.00 0.00 3.72
138 139 9.107177 ACAAATGATTAAAAATCTTGCACACAA 57.893 25.926 0.00 0.00 0.00 3.33
143 144 9.107177 TGATTAAAAATCTTGCACACAATTTGT 57.893 25.926 0.00 0.00 39.97 2.83
146 147 9.809096 TTAAAAATCTTGCACACAATTTGTAGA 57.191 25.926 0.86 1.74 35.67 2.59
147 148 8.715191 AAAAATCTTGCACACAATTTGTAGAA 57.285 26.923 0.86 0.00 35.67 2.10
148 149 8.715191 AAAATCTTGCACACAATTTGTAGAAA 57.285 26.923 0.86 0.00 35.67 2.52
149 150 8.715191 AAATCTTGCACACAATTTGTAGAAAA 57.285 26.923 0.86 0.00 35.67 2.29
150 151 8.715191 AATCTTGCACACAATTTGTAGAAAAA 57.285 26.923 0.86 0.00 35.67 1.94
151 152 8.891671 ATCTTGCACACAATTTGTAGAAAAAT 57.108 26.923 0.86 0.00 35.67 1.82
152 153 8.129161 TCTTGCACACAATTTGTAGAAAAATG 57.871 30.769 0.86 0.00 35.67 2.32
153 154 6.284475 TGCACACAATTTGTAGAAAAATGC 57.716 33.333 0.86 4.94 35.67 3.56
154 155 5.814188 TGCACACAATTTGTAGAAAAATGCA 59.186 32.000 0.86 7.14 35.67 3.96
155 156 6.128729 GCACACAATTTGTAGAAAAATGCAC 58.871 36.000 0.86 0.00 35.67 4.57
156 157 6.238049 GCACACAATTTGTAGAAAAATGCACA 60.238 34.615 0.86 0.00 35.67 4.57
157 158 7.518689 GCACACAATTTGTAGAAAAATGCACAT 60.519 33.333 0.86 0.00 35.67 3.21
158 159 8.336806 CACACAATTTGTAGAAAAATGCACATT 58.663 29.630 0.86 0.00 35.67 2.71
159 160 8.891720 ACACAATTTGTAGAAAAATGCACATTT 58.108 25.926 0.86 2.77 38.51 2.32
160 161 9.372541 CACAATTTGTAGAAAAATGCACATTTC 57.627 29.630 15.00 15.00 39.88 2.17
161 162 9.328845 ACAATTTGTAGAAAAATGCACATTTCT 57.671 25.926 24.04 24.04 45.29 2.52
162 163 9.588774 CAATTTGTAGAAAAATGCACATTTCTG 57.411 29.630 26.86 13.19 43.67 3.02
163 164 8.891671 ATTTGTAGAAAAATGCACATTTCTGT 57.108 26.923 26.86 12.83 43.67 3.41
164 165 9.979578 ATTTGTAGAAAAATGCACATTTCTGTA 57.020 25.926 26.86 17.51 43.67 2.74
165 166 9.809096 TTTGTAGAAAAATGCACATTTCTGTAA 57.191 25.926 26.86 20.59 43.67 2.41
166 167 9.809096 TTGTAGAAAAATGCACATTTCTGTAAA 57.191 25.926 26.86 18.66 43.67 2.01
167 168 9.979578 TGTAGAAAAATGCACATTTCTGTAAAT 57.020 25.926 26.86 11.28 43.67 1.40
215 216 8.841444 GTGCATTTCACAGTTCGATATAATTT 57.159 30.769 0.00 0.00 44.98 1.82
216 217 9.929722 GTGCATTTCACAGTTCGATATAATTTA 57.070 29.630 0.00 0.00 44.98 1.40
260 261 9.150028 ACATATGTATATACTAACACACACCCA 57.850 33.333 6.56 0.00 0.00 4.51
261 262 9.990360 CATATGTATATACTAACACACACCCAA 57.010 33.333 13.89 0.00 0.00 4.12
262 263 9.991906 ATATGTATATACTAACACACACCCAAC 57.008 33.333 13.89 0.00 0.00 3.77
263 264 7.242322 TGTATATACTAACACACACCCAACA 57.758 36.000 13.89 0.00 0.00 3.33
264 265 7.853299 TGTATATACTAACACACACCCAACAT 58.147 34.615 13.89 0.00 0.00 2.71
265 266 8.322828 TGTATATACTAACACACACCCAACATT 58.677 33.333 13.89 0.00 0.00 2.71
266 267 9.169592 GTATATACTAACACACACCCAACATTT 57.830 33.333 5.58 0.00 0.00 2.32
268 269 5.761165 ACTAACACACACCCAACATTTAC 57.239 39.130 0.00 0.00 0.00 2.01
269 270 5.194432 ACTAACACACACCCAACATTTACA 58.806 37.500 0.00 0.00 0.00 2.41
270 271 4.379339 AACACACACCCAACATTTACAC 57.621 40.909 0.00 0.00 0.00 2.90
271 272 3.357203 ACACACACCCAACATTTACACA 58.643 40.909 0.00 0.00 0.00 3.72
272 273 3.957497 ACACACACCCAACATTTACACAT 59.043 39.130 0.00 0.00 0.00 3.21
273 274 5.133941 ACACACACCCAACATTTACACATA 58.866 37.500 0.00 0.00 0.00 2.29
274 275 5.772672 ACACACACCCAACATTTACACATAT 59.227 36.000 0.00 0.00 0.00 1.78
275 276 6.092092 CACACACCCAACATTTACACATATG 58.908 40.000 0.00 0.00 0.00 1.78
276 277 5.101628 CACACCCAACATTTACACATATGC 58.898 41.667 1.58 0.00 0.00 3.14
277 278 4.769488 ACACCCAACATTTACACATATGCA 59.231 37.500 1.58 0.00 0.00 3.96
278 279 5.421693 ACACCCAACATTTACACATATGCAT 59.578 36.000 3.79 3.79 0.00 3.96
279 280 6.605194 ACACCCAACATTTACACATATGCATA 59.395 34.615 9.27 9.27 0.00 3.14
280 281 6.917477 CACCCAACATTTACACATATGCATAC 59.083 38.462 8.99 0.00 0.00 2.39
281 282 6.605194 ACCCAACATTTACACATATGCATACA 59.395 34.615 8.99 0.00 0.00 2.29
282 283 6.917477 CCCAACATTTACACATATGCATACAC 59.083 38.462 8.99 0.00 0.00 2.90
283 284 7.416101 CCCAACATTTACACATATGCATACACA 60.416 37.037 8.99 0.00 0.00 3.72
284 285 8.136800 CCAACATTTACACATATGCATACACAT 58.863 33.333 8.99 0.00 0.00 3.21
293 294 9.394767 ACACATATGCATACACATAAAAGAAGA 57.605 29.630 8.99 0.00 36.17 2.87
294 295 9.655769 CACATATGCATACACATAAAAGAAGAC 57.344 33.333 8.99 0.00 36.17 3.01
295 296 9.618890 ACATATGCATACACATAAAAGAAGACT 57.381 29.630 8.99 0.00 36.17 3.24
297 298 9.836864 ATATGCATACACATAAAAGAAGACTCA 57.163 29.630 8.99 0.00 36.17 3.41
298 299 7.977789 TGCATACACATAAAAGAAGACTCAA 57.022 32.000 0.00 0.00 0.00 3.02
299 300 8.032952 TGCATACACATAAAAGAAGACTCAAG 57.967 34.615 0.00 0.00 0.00 3.02
300 301 7.877612 TGCATACACATAAAAGAAGACTCAAGA 59.122 33.333 0.00 0.00 0.00 3.02
301 302 8.887717 GCATACACATAAAAGAAGACTCAAGAT 58.112 33.333 0.00 0.00 0.00 2.40
336 337 8.825667 AACAGAAACAAACACACATAAAAAGT 57.174 26.923 0.00 0.00 0.00 2.66
337 338 9.915629 AACAGAAACAAACACACATAAAAAGTA 57.084 25.926 0.00 0.00 0.00 2.24
338 339 9.915629 ACAGAAACAAACACACATAAAAAGTAA 57.084 25.926 0.00 0.00 0.00 2.24
362 363 3.802948 AAAACGCACCCAACATTTACA 57.197 38.095 0.00 0.00 0.00 2.41
363 364 2.785713 AACGCACCCAACATTTACAC 57.214 45.000 0.00 0.00 0.00 2.90
364 365 1.681538 ACGCACCCAACATTTACACA 58.318 45.000 0.00 0.00 0.00 3.72
365 366 2.235016 ACGCACCCAACATTTACACAT 58.765 42.857 0.00 0.00 0.00 3.21
366 367 3.413327 ACGCACCCAACATTTACACATA 58.587 40.909 0.00 0.00 0.00 2.29
367 368 3.821600 ACGCACCCAACATTTACACATAA 59.178 39.130 0.00 0.00 0.00 1.90
368 369 4.278669 ACGCACCCAACATTTACACATAAA 59.721 37.500 0.00 0.00 34.78 1.40
369 370 4.619336 CGCACCCAACATTTACACATAAAC 59.381 41.667 0.00 0.00 33.09 2.01
370 371 5.533482 GCACCCAACATTTACACATAAACA 58.467 37.500 0.00 0.00 33.09 2.83
371 372 6.162777 GCACCCAACATTTACACATAAACAT 58.837 36.000 0.00 0.00 33.09 2.71
372 373 7.316640 GCACCCAACATTTACACATAAACATA 58.683 34.615 0.00 0.00 33.09 2.29
373 374 7.815068 GCACCCAACATTTACACATAAACATAA 59.185 33.333 0.00 0.00 33.09 1.90
374 375 9.698309 CACCCAACATTTACACATAAACATAAA 57.302 29.630 0.00 0.00 33.09 1.40
418 419 5.413309 AAAATCCCAGAAACAAACACACA 57.587 34.783 0.00 0.00 0.00 3.72
419 420 5.612725 AAATCCCAGAAACAAACACACAT 57.387 34.783 0.00 0.00 0.00 3.21
420 421 6.723298 AAATCCCAGAAACAAACACACATA 57.277 33.333 0.00 0.00 0.00 2.29
421 422 6.723298 AATCCCAGAAACAAACACACATAA 57.277 33.333 0.00 0.00 0.00 1.90
422 423 6.723298 ATCCCAGAAACAAACACACATAAA 57.277 33.333 0.00 0.00 0.00 1.40
423 424 6.531503 TCCCAGAAACAAACACACATAAAA 57.468 33.333 0.00 0.00 0.00 1.52
424 425 6.936279 TCCCAGAAACAAACACACATAAAAA 58.064 32.000 0.00 0.00 0.00 1.94
425 426 7.038659 TCCCAGAAACAAACACACATAAAAAG 58.961 34.615 0.00 0.00 0.00 2.27
426 427 7.038659 CCCAGAAACAAACACACATAAAAAGA 58.961 34.615 0.00 0.00 0.00 2.52
427 428 7.547370 CCCAGAAACAAACACACATAAAAAGAA 59.453 33.333 0.00 0.00 0.00 2.52
428 429 8.930760 CCAGAAACAAACACACATAAAAAGAAA 58.069 29.630 0.00 0.00 0.00 2.52
448 449 4.400529 AAAAAGCATGAACCGGTTTTCT 57.599 36.364 23.22 12.87 41.73 2.52
449 450 4.400529 AAAAGCATGAACCGGTTTTCTT 57.599 36.364 23.22 17.67 39.21 2.52
450 451 4.400529 AAAGCATGAACCGGTTTTCTTT 57.599 36.364 23.22 21.76 30.22 2.52
451 452 5.523438 AAAGCATGAACCGGTTTTCTTTA 57.477 34.783 23.22 4.63 30.22 1.85
452 453 5.722021 AAGCATGAACCGGTTTTCTTTAT 57.278 34.783 23.22 6.78 0.00 1.40
453 454 6.827586 AAGCATGAACCGGTTTTCTTTATA 57.172 33.333 23.22 1.42 0.00 0.98
454 455 7.404671 AAGCATGAACCGGTTTTCTTTATAT 57.595 32.000 23.22 0.00 0.00 0.86
455 456 7.404671 AGCATGAACCGGTTTTCTTTATATT 57.595 32.000 23.22 0.00 0.00 1.28
456 457 8.514330 AGCATGAACCGGTTTTCTTTATATTA 57.486 30.769 23.22 0.00 0.00 0.98
457 458 8.403236 AGCATGAACCGGTTTTCTTTATATTAC 58.597 33.333 23.22 3.98 0.00 1.89
458 459 8.403236 GCATGAACCGGTTTTCTTTATATTACT 58.597 33.333 23.22 0.00 0.00 2.24
459 460 9.716507 CATGAACCGGTTTTCTTTATATTACTG 57.283 33.333 23.22 0.94 0.00 2.74
460 461 8.851541 TGAACCGGTTTTCTTTATATTACTGT 57.148 30.769 23.22 0.00 0.00 3.55
461 462 8.938906 TGAACCGGTTTTCTTTATATTACTGTC 58.061 33.333 23.22 2.02 0.00 3.51
462 463 8.851541 AACCGGTTTTCTTTATATTACTGTCA 57.148 30.769 15.86 0.00 0.00 3.58
463 464 8.851541 ACCGGTTTTCTTTATATTACTGTCAA 57.148 30.769 0.00 0.00 0.00 3.18
464 465 9.287373 ACCGGTTTTCTTTATATTACTGTCAAA 57.713 29.630 0.00 0.00 0.00 2.69
482 483 9.399797 ACTGTCAAATATCAAAAGCATCATAGA 57.600 29.630 0.00 0.00 0.00 1.98
492 493 9.798994 ATCAAAAGCATCATAGAATTTGTCTTC 57.201 29.630 0.00 0.00 37.84 2.87
493 494 7.964559 TCAAAAGCATCATAGAATTTGTCTTCG 59.035 33.333 0.00 0.00 37.84 3.79
494 495 7.615582 AAAGCATCATAGAATTTGTCTTCGA 57.384 32.000 0.00 0.00 37.84 3.71
495 496 7.615582 AAGCATCATAGAATTTGTCTTCGAA 57.384 32.000 0.00 0.00 37.84 3.71
496 497 7.798596 AGCATCATAGAATTTGTCTTCGAAT 57.201 32.000 0.00 0.00 37.84 3.34
497 498 8.218338 AGCATCATAGAATTTGTCTTCGAATT 57.782 30.769 0.00 0.00 39.53 2.17
498 499 8.680903 AGCATCATAGAATTTGTCTTCGAATTT 58.319 29.630 0.00 0.00 37.66 1.82
499 500 9.935682 GCATCATAGAATTTGTCTTCGAATTTA 57.064 29.630 0.00 0.00 37.66 1.40
510 511 9.932699 TTTGTCTTCGAATTTAAATTAACACGA 57.067 25.926 13.34 14.19 0.00 4.35
511 512 8.922738 TGTCTTCGAATTTAAATTAACACGAC 57.077 30.769 17.18 16.30 0.00 4.34
512 513 8.767085 TGTCTTCGAATTTAAATTAACACGACT 58.233 29.630 17.18 0.00 0.00 4.18
513 514 9.247562 GTCTTCGAATTTAAATTAACACGACTC 57.752 33.333 17.18 9.97 0.00 3.36
514 515 8.157813 TCTTCGAATTTAAATTAACACGACTCG 58.842 33.333 17.18 12.13 0.00 4.18
515 516 7.565450 TCGAATTTAAATTAACACGACTCGA 57.435 32.000 13.34 11.55 0.00 4.04
516 517 7.439490 TCGAATTTAAATTAACACGACTCGAC 58.561 34.615 13.34 0.00 0.00 4.20
517 518 7.114670 TCGAATTTAAATTAACACGACTCGACA 59.885 33.333 13.34 0.00 0.00 4.35
518 519 7.736880 CGAATTTAAATTAACACGACTCGACAA 59.263 33.333 13.34 0.00 0.00 3.18
519 520 9.372541 GAATTTAAATTAACACGACTCGACAAA 57.627 29.630 13.34 0.00 0.00 2.83
520 521 8.703823 ATTTAAATTAACACGACTCGACAAAC 57.296 30.769 5.20 0.00 0.00 2.93
521 522 5.721876 AAATTAACACGACTCGACAAACA 57.278 34.783 5.20 0.00 0.00 2.83
522 523 4.703899 ATTAACACGACTCGACAAACAC 57.296 40.909 5.20 0.00 0.00 3.32
523 524 0.918619 AACACGACTCGACAAACACG 59.081 50.000 5.20 0.00 0.00 4.49
524 525 1.198397 CACGACTCGACAAACACGC 59.802 57.895 5.20 0.00 0.00 5.34
525 526 1.947642 ACGACTCGACAAACACGCC 60.948 57.895 5.20 0.00 0.00 5.68
526 527 2.654912 CGACTCGACAAACACGCCC 61.655 63.158 0.00 0.00 0.00 6.13
527 528 1.593209 GACTCGACAAACACGCCCA 60.593 57.895 0.00 0.00 0.00 5.36
528 529 1.828331 GACTCGACAAACACGCCCAC 61.828 60.000 0.00 0.00 0.00 4.61
529 530 1.594293 CTCGACAAACACGCCCACT 60.594 57.895 0.00 0.00 0.00 4.00
530 531 0.319211 CTCGACAAACACGCCCACTA 60.319 55.000 0.00 0.00 0.00 2.74
531 532 0.104487 TCGACAAACACGCCCACTAA 59.896 50.000 0.00 0.00 0.00 2.24
532 533 0.938713 CGACAAACACGCCCACTAAA 59.061 50.000 0.00 0.00 0.00 1.85
533 534 1.331138 CGACAAACACGCCCACTAAAA 59.669 47.619 0.00 0.00 0.00 1.52
534 535 2.031508 CGACAAACACGCCCACTAAAAT 60.032 45.455 0.00 0.00 0.00 1.82
535 536 3.186817 CGACAAACACGCCCACTAAAATA 59.813 43.478 0.00 0.00 0.00 1.40
536 537 4.469552 GACAAACACGCCCACTAAAATAC 58.530 43.478 0.00 0.00 0.00 1.89
537 538 4.139038 ACAAACACGCCCACTAAAATACT 58.861 39.130 0.00 0.00 0.00 2.12
538 539 4.214758 ACAAACACGCCCACTAAAATACTC 59.785 41.667 0.00 0.00 0.00 2.59
539 540 2.613691 ACACGCCCACTAAAATACTCG 58.386 47.619 0.00 0.00 0.00 4.18
540 541 1.931172 CACGCCCACTAAAATACTCGG 59.069 52.381 0.00 0.00 0.00 4.63
541 542 0.935196 CGCCCACTAAAATACTCGGC 59.065 55.000 0.00 0.00 0.00 5.54
542 543 1.306148 GCCCACTAAAATACTCGGCC 58.694 55.000 0.00 0.00 0.00 6.13
543 544 1.578583 CCCACTAAAATACTCGGCCG 58.421 55.000 22.12 22.12 0.00 6.13
544 545 0.935196 CCACTAAAATACTCGGCCGC 59.065 55.000 23.51 0.00 0.00 6.53
545 546 0.935196 CACTAAAATACTCGGCCGCC 59.065 55.000 23.51 0.00 0.00 6.13
546 547 0.828677 ACTAAAATACTCGGCCGCCT 59.171 50.000 23.51 10.25 0.00 5.52
547 548 1.217882 CTAAAATACTCGGCCGCCTG 58.782 55.000 23.51 15.56 0.00 4.85
548 549 0.538118 TAAAATACTCGGCCGCCTGT 59.462 50.000 23.51 20.58 0.00 4.00
549 550 0.743345 AAAATACTCGGCCGCCTGTC 60.743 55.000 23.51 0.00 0.00 3.51
550 551 1.895020 AAATACTCGGCCGCCTGTCA 61.895 55.000 23.51 0.00 0.00 3.58
551 552 2.298158 AATACTCGGCCGCCTGTCAG 62.298 60.000 23.51 14.50 0.00 3.51
552 553 3.931190 TACTCGGCCGCCTGTCAGA 62.931 63.158 23.51 0.00 0.00 3.27
553 554 4.803426 CTCGGCCGCCTGTCAGAC 62.803 72.222 23.51 0.00 0.00 3.51
557 558 4.057428 GCCGCCTGTCAGACGTCT 62.057 66.667 13.58 13.58 0.00 4.18
558 559 2.697761 GCCGCCTGTCAGACGTCTA 61.698 63.158 19.57 1.41 0.00 2.59
559 560 1.880894 CCGCCTGTCAGACGTCTAA 59.119 57.895 19.57 0.00 0.00 2.10
560 561 0.456221 CCGCCTGTCAGACGTCTAAT 59.544 55.000 19.57 0.00 0.00 1.73
561 562 1.550065 CGCCTGTCAGACGTCTAATG 58.450 55.000 19.57 7.41 0.00 1.90
562 563 1.132453 CGCCTGTCAGACGTCTAATGA 59.868 52.381 19.57 9.97 0.00 2.57
563 564 2.223595 CGCCTGTCAGACGTCTAATGAT 60.224 50.000 19.57 0.00 0.00 2.45
564 565 3.735208 CGCCTGTCAGACGTCTAATGATT 60.735 47.826 19.57 0.00 0.00 2.57
565 566 4.497507 CGCCTGTCAGACGTCTAATGATTA 60.498 45.833 19.57 5.55 0.00 1.75
566 567 5.348986 GCCTGTCAGACGTCTAATGATTAA 58.651 41.667 19.57 2.49 0.00 1.40
567 568 5.986135 GCCTGTCAGACGTCTAATGATTAAT 59.014 40.000 19.57 0.00 0.00 1.40
568 569 7.145985 GCCTGTCAGACGTCTAATGATTAATA 58.854 38.462 19.57 0.00 0.00 0.98
569 570 7.115095 GCCTGTCAGACGTCTAATGATTAATAC 59.885 40.741 19.57 1.04 0.00 1.89
570 571 8.353684 CCTGTCAGACGTCTAATGATTAATACT 58.646 37.037 19.57 0.00 0.00 2.12
571 572 9.388346 CTGTCAGACGTCTAATGATTAATACTC 57.612 37.037 19.57 0.00 0.00 2.59
572 573 8.899771 TGTCAGACGTCTAATGATTAATACTCA 58.100 33.333 19.57 1.70 0.00 3.41
573 574 9.171701 GTCAGACGTCTAATGATTAATACTCAC 57.828 37.037 19.57 0.00 0.00 3.51
574 575 8.068380 TCAGACGTCTAATGATTAATACTCACG 58.932 37.037 19.57 0.00 0.00 4.35
575 576 6.856938 AGACGTCTAATGATTAATACTCACGC 59.143 38.462 18.46 0.00 0.00 5.34
576 577 6.736123 ACGTCTAATGATTAATACTCACGCT 58.264 36.000 0.00 0.00 0.00 5.07
577 578 7.868775 ACGTCTAATGATTAATACTCACGCTA 58.131 34.615 0.00 0.00 0.00 4.26
578 579 8.347771 ACGTCTAATGATTAATACTCACGCTAA 58.652 33.333 0.00 0.00 0.00 3.09
579 580 9.343103 CGTCTAATGATTAATACTCACGCTAAT 57.657 33.333 0.00 0.00 0.00 1.73
592 593 6.371389 ACTCACGCTAATTAAGAAAGTTTGC 58.629 36.000 0.00 0.00 0.00 3.68
593 594 6.017440 ACTCACGCTAATTAAGAAAGTTTGCA 60.017 34.615 0.00 0.00 0.00 4.08
594 595 6.908825 TCACGCTAATTAAGAAAGTTTGCAT 58.091 32.000 0.00 0.00 0.00 3.96
595 596 6.801377 TCACGCTAATTAAGAAAGTTTGCATG 59.199 34.615 0.00 0.00 0.00 4.06
596 597 5.572896 ACGCTAATTAAGAAAGTTTGCATGC 59.427 36.000 11.82 11.82 0.00 4.06
597 598 5.572511 CGCTAATTAAGAAAGTTTGCATGCA 59.427 36.000 18.46 18.46 0.00 3.96
598 599 6.254157 CGCTAATTAAGAAAGTTTGCATGCAT 59.746 34.615 23.37 5.68 0.00 3.96
599 600 7.514125 CGCTAATTAAGAAAGTTTGCATGCATC 60.514 37.037 23.37 15.65 0.00 3.91
600 601 6.636666 AATTAAGAAAGTTTGCATGCATCG 57.363 33.333 23.37 0.00 0.00 3.84
601 602 2.642139 AGAAAGTTTGCATGCATCGG 57.358 45.000 23.37 0.00 0.00 4.18
602 603 0.994263 GAAAGTTTGCATGCATCGGC 59.006 50.000 23.37 11.78 41.68 5.54
619 620 2.713770 CAGATCGGCTGCATGCAC 59.286 61.111 18.46 13.69 45.15 4.57
620 621 2.110352 CAGATCGGCTGCATGCACA 61.110 57.895 18.46 0.89 45.15 4.57
621 622 1.153025 AGATCGGCTGCATGCACAT 60.153 52.632 18.46 6.33 45.15 3.21
622 623 1.008881 GATCGGCTGCATGCACATG 60.009 57.895 18.46 8.85 45.15 3.21
623 624 2.402282 GATCGGCTGCATGCACATGG 62.402 60.000 18.46 8.43 45.15 3.66
624 625 3.445687 CGGCTGCATGCACATGGT 61.446 61.111 18.46 0.00 45.15 3.55
625 626 2.114051 CGGCTGCATGCACATGGTA 61.114 57.895 18.46 0.00 45.15 3.25
626 627 1.731700 GGCTGCATGCACATGGTAG 59.268 57.895 18.46 6.37 45.15 3.18
627 628 1.065273 GCTGCATGCACATGGTAGC 59.935 57.895 18.46 13.34 42.31 3.58
628 629 1.354155 CTGCATGCACATGGTAGCG 59.646 57.895 18.46 0.00 39.16 4.26
629 630 2.025156 GCATGCACATGGTAGCGC 59.975 61.111 14.21 0.00 39.16 5.92
630 631 2.475466 GCATGCACATGGTAGCGCT 61.475 57.895 17.26 17.26 39.16 5.92
631 632 1.645455 CATGCACATGGTAGCGCTC 59.355 57.895 16.34 5.63 35.24 5.03
632 633 1.884464 ATGCACATGGTAGCGCTCG 60.884 57.895 16.34 0.48 0.00 5.03
633 634 2.509336 GCACATGGTAGCGCTCGT 60.509 61.111 16.34 0.00 0.00 4.18
634 635 2.517450 GCACATGGTAGCGCTCGTC 61.517 63.158 16.34 5.83 0.00 4.20
635 636 1.153842 CACATGGTAGCGCTCGTCA 60.154 57.895 16.34 11.76 0.00 4.35
636 637 1.153823 ACATGGTAGCGCTCGTCAC 60.154 57.895 16.34 6.28 0.00 3.67
637 638 2.102357 ATGGTAGCGCTCGTCACG 59.898 61.111 16.34 0.00 0.00 4.35
638 639 2.697761 ATGGTAGCGCTCGTCACGT 61.698 57.895 16.34 0.00 0.00 4.49
639 640 2.867333 ATGGTAGCGCTCGTCACGTG 62.867 60.000 16.34 9.94 0.00 4.49
640 641 3.533691 GTAGCGCTCGTCACGTGC 61.534 66.667 16.34 14.20 41.87 5.34
641 642 4.032987 TAGCGCTCGTCACGTGCA 62.033 61.111 22.84 1.87 44.82 4.57
642 643 3.336715 TAGCGCTCGTCACGTGCAT 62.337 57.895 22.84 13.45 44.82 3.96
643 644 4.489795 GCGCTCGTCACGTGCATG 62.490 66.667 22.84 9.57 44.82 4.06
644 645 2.804931 CGCTCGTCACGTGCATGA 60.805 61.111 22.84 9.86 44.82 3.07
645 646 2.371923 CGCTCGTCACGTGCATGAA 61.372 57.895 22.84 0.00 44.82 2.57
646 647 1.417592 GCTCGTCACGTGCATGAAG 59.582 57.895 18.93 4.83 44.15 3.02
647 648 1.284982 GCTCGTCACGTGCATGAAGT 61.285 55.000 18.93 0.00 44.15 3.01
648 649 0.436150 CTCGTCACGTGCATGAAGTG 59.564 55.000 14.17 10.30 35.54 3.16
685 686 8.748380 GGACTGATCCTAAATTGTTTTTCAAG 57.252 34.615 0.00 0.00 42.45 3.02
686 687 7.329471 GGACTGATCCTAAATTGTTTTTCAAGC 59.671 37.037 0.00 0.00 42.45 4.01
687 688 6.863126 ACTGATCCTAAATTGTTTTTCAAGCG 59.137 34.615 0.00 0.00 39.55 4.68
688 689 6.976088 TGATCCTAAATTGTTTTTCAAGCGA 58.024 32.000 0.00 0.00 39.55 4.93
689 690 6.861055 TGATCCTAAATTGTTTTTCAAGCGAC 59.139 34.615 0.00 0.00 39.55 5.19
690 691 6.385649 TCCTAAATTGTTTTTCAAGCGACT 57.614 33.333 0.00 0.00 39.55 4.18
691 692 6.205784 TCCTAAATTGTTTTTCAAGCGACTG 58.794 36.000 0.00 0.00 39.55 3.51
692 693 6.038825 TCCTAAATTGTTTTTCAAGCGACTGA 59.961 34.615 0.00 0.00 39.55 3.41
693 694 6.695278 CCTAAATTGTTTTTCAAGCGACTGAA 59.305 34.615 0.00 0.00 39.55 3.02
694 695 6.573617 AAATTGTTTTTCAAGCGACTGAAG 57.426 33.333 0.00 0.00 39.55 3.02
695 696 4.955925 TTGTTTTTCAAGCGACTGAAGA 57.044 36.364 0.00 0.00 36.69 2.87
696 697 4.536364 TGTTTTTCAAGCGACTGAAGAG 57.464 40.909 0.00 0.00 36.69 2.85
697 698 3.938963 TGTTTTTCAAGCGACTGAAGAGT 59.061 39.130 0.00 0.00 36.69 3.24
698 699 5.113383 TGTTTTTCAAGCGACTGAAGAGTA 58.887 37.500 0.00 0.00 36.69 2.59
699 700 5.234329 TGTTTTTCAAGCGACTGAAGAGTAG 59.766 40.000 0.00 0.00 36.69 2.57
706 707 4.099380 GCGACTGAAGAGTAGCTAAAGT 57.901 45.455 0.00 0.00 44.87 2.66
707 708 3.854809 GCGACTGAAGAGTAGCTAAAGTG 59.145 47.826 0.00 0.00 44.87 3.16
708 709 4.379603 GCGACTGAAGAGTAGCTAAAGTGA 60.380 45.833 0.00 0.00 44.87 3.41
709 710 5.700846 CGACTGAAGAGTAGCTAAAGTGAA 58.299 41.667 0.00 0.00 30.16 3.18
710 711 5.797934 CGACTGAAGAGTAGCTAAAGTGAAG 59.202 44.000 0.00 0.00 30.16 3.02
711 712 6.348622 CGACTGAAGAGTAGCTAAAGTGAAGA 60.349 42.308 0.00 0.00 30.16 2.87
712 713 7.291411 ACTGAAGAGTAGCTAAAGTGAAGAA 57.709 36.000 0.00 0.00 0.00 2.52
733 739 0.534877 AAACACTGCATGCGTCTCCA 60.535 50.000 14.09 0.00 0.00 3.86
792 798 3.673594 CGGAACCGTATATCTCCAGATGC 60.674 52.174 4.99 0.00 33.96 3.91
847 853 3.391382 GACCACCTGTCCCCTCCG 61.391 72.222 0.00 0.00 38.09 4.63
909 922 4.785453 CCCAACTCCAGCCGCTCC 62.785 72.222 0.00 0.00 0.00 4.70
934 947 2.866028 CTTGCGGAAGAGTGCAGC 59.134 61.111 11.79 0.00 42.89 5.25
982 995 1.899142 AGACAGAGGAGAAAGTCAGCC 59.101 52.381 0.00 0.00 33.56 4.85
990 1003 2.354604 GGAGAAAGTCAGCCTCTTGGAG 60.355 54.545 0.00 0.00 34.57 3.86
991 1004 2.564947 GAGAAAGTCAGCCTCTTGGAGA 59.435 50.000 0.00 0.00 34.57 3.71
992 1005 2.301583 AGAAAGTCAGCCTCTTGGAGAC 59.698 50.000 0.00 0.00 39.00 3.36
993 1006 0.980423 AAGTCAGCCTCTTGGAGACC 59.020 55.000 0.00 0.00 39.30 3.85
994 1007 0.116143 AGTCAGCCTCTTGGAGACCT 59.884 55.000 0.00 0.00 39.30 3.85
995 1008 0.248843 GTCAGCCTCTTGGAGACCTG 59.751 60.000 0.00 3.27 35.35 4.00
996 1009 0.906756 TCAGCCTCTTGGAGACCTGG 60.907 60.000 0.00 0.00 33.21 4.45
997 1010 0.906756 CAGCCTCTTGGAGACCTGGA 60.907 60.000 0.00 0.00 34.57 3.86
1168 1181 1.067776 GTACGTGAACCTGCTAGCACT 60.068 52.381 14.93 0.46 0.00 4.40
1176 1212 1.065345 ACCTGCTAGCACTCTCTCGTA 60.065 52.381 14.93 0.00 0.00 3.43
1183 1219 4.452795 GCTAGCACTCTCTCGTATACATGA 59.547 45.833 10.63 0.00 0.00 3.07
1184 1220 5.123186 GCTAGCACTCTCTCGTATACATGAT 59.877 44.000 10.63 0.00 0.00 2.45
1188 1224 6.027131 GCACTCTCTCGTATACATGATCATC 58.973 44.000 4.86 0.00 0.00 2.92
1191 1227 6.312672 ACTCTCTCGTATACATGATCATCTCG 59.687 42.308 4.86 6.69 0.00 4.04
1207 1243 3.268603 CGCGGTGCTGTGTGTGAA 61.269 61.111 0.00 0.00 0.00 3.18
1214 1258 3.489059 CGGTGCTGTGTGTGAAGAATTTT 60.489 43.478 0.00 0.00 0.00 1.82
1218 1262 5.348451 GTGCTGTGTGTGAAGAATTTTGTTT 59.652 36.000 0.00 0.00 0.00 2.83
1219 1263 5.348179 TGCTGTGTGTGAAGAATTTTGTTTG 59.652 36.000 0.00 0.00 0.00 2.93
1396 1440 2.899339 GGCAGGCGCATCTCCTTC 60.899 66.667 10.83 0.00 41.24 3.46
1540 1608 3.435590 TGCACTGCAGTTGCCTTC 58.564 55.556 27.26 11.77 41.18 3.46
1555 1623 5.531287 AGTTGCCTTCGATTAAGTTGTTTCT 59.469 36.000 0.00 0.00 32.89 2.52
1590 1658 2.285083 TGTCTGAAAAAGTCACCACGG 58.715 47.619 0.00 0.00 31.13 4.94
1594 1662 2.011222 TGAAAAAGTCACCACGGTCAC 58.989 47.619 0.00 0.00 0.00 3.67
1596 1664 2.116827 AAAAGTCACCACGGTCACAA 57.883 45.000 0.00 0.00 0.00 3.33
1597 1665 1.663695 AAAGTCACCACGGTCACAAG 58.336 50.000 0.00 0.00 0.00 3.16
1598 1666 0.539986 AAGTCACCACGGTCACAAGT 59.460 50.000 0.00 0.00 0.00 3.16
1599 1667 0.539986 AGTCACCACGGTCACAAGTT 59.460 50.000 0.00 0.00 0.00 2.66
1600 1668 0.935196 GTCACCACGGTCACAAGTTC 59.065 55.000 0.00 0.00 0.00 3.01
1601 1669 0.537653 TCACCACGGTCACAAGTTCA 59.462 50.000 0.00 0.00 0.00 3.18
1602 1670 1.066071 TCACCACGGTCACAAGTTCAA 60.066 47.619 0.00 0.00 0.00 2.69
1603 1671 1.946768 CACCACGGTCACAAGTTCAAT 59.053 47.619 0.00 0.00 0.00 2.57
1625 1694 1.482593 AGCTCAGCGCCTATTGTTACT 59.517 47.619 2.29 0.00 40.39 2.24
1639 1708 7.144661 CCTATTGTTACTGTTGCACAAATTGA 58.855 34.615 0.00 0.00 34.19 2.57
1665 1734 4.574013 CAGTTTCAGAGCCATCAGGTATTC 59.426 45.833 0.00 0.00 37.19 1.75
1692 1761 5.103000 TCGCAGAGCTAGAAACATTTACTC 58.897 41.667 0.00 0.00 0.00 2.59
1775 1845 1.084289 GCGGTTGCGTATTTCCTCTT 58.916 50.000 0.00 0.00 0.00 2.85
2109 2189 4.803426 GGCACTCGTCGGCTGGAG 62.803 72.222 0.00 0.00 36.36 3.86
2260 2340 1.658717 CGCCGAGGATTACTGAGCG 60.659 63.158 0.00 0.00 0.00 5.03
2263 2343 1.437573 CGAGGATTACTGAGCGGCA 59.562 57.895 1.45 0.00 0.00 5.69
2264 2344 0.032678 CGAGGATTACTGAGCGGCAT 59.967 55.000 1.45 0.00 0.00 4.40
2265 2345 1.506493 GAGGATTACTGAGCGGCATG 58.494 55.000 1.45 0.00 0.00 4.06
2309 2389 2.577059 GCACCTGCATGCAAGCAT 59.423 55.556 22.88 0.00 44.68 3.79
2310 2390 1.811195 GCACCTGCATGCAAGCATA 59.189 52.632 22.88 0.00 44.68 3.14
2311 2391 0.526954 GCACCTGCATGCAAGCATAC 60.527 55.000 22.88 5.62 44.68 2.39
2312 2392 1.100510 CACCTGCATGCAAGCATACT 58.899 50.000 22.88 0.00 44.68 2.12
2318 2398 4.287720 CTGCATGCAAGCATACTATGTTG 58.712 43.478 22.88 0.26 44.68 3.33
2319 2399 3.067040 TGCATGCAAGCATACTATGTTGG 59.933 43.478 20.30 0.00 40.11 3.77
2378 2461 8.820831 TCAAATAAAGAAGAGAGAAGGAGTCAT 58.179 33.333 0.00 0.00 0.00 3.06
2383 2466 6.327386 AGAAGAGAGAAGGAGTCATAGTCT 57.673 41.667 0.00 0.00 0.00 3.24
2395 2478 5.983540 GAGTCATAGTCTGATTCCAAACCT 58.016 41.667 0.00 0.00 35.22 3.50
2401 2484 5.825593 AGTCTGATTCCAAACCTGTTAGA 57.174 39.130 0.00 0.00 0.00 2.10
2402 2485 5.799213 AGTCTGATTCCAAACCTGTTAGAG 58.201 41.667 0.00 0.00 0.00 2.43
2403 2486 4.393371 GTCTGATTCCAAACCTGTTAGAGC 59.607 45.833 0.00 0.00 0.00 4.09
2404 2487 4.041567 TCTGATTCCAAACCTGTTAGAGCA 59.958 41.667 0.00 0.00 0.00 4.26
2405 2488 4.922206 TGATTCCAAACCTGTTAGAGCAT 58.078 39.130 0.00 0.00 0.00 3.79
2406 2489 4.943705 TGATTCCAAACCTGTTAGAGCATC 59.056 41.667 0.00 0.00 0.00 3.91
2417 2500 3.805267 GAGCATCTCCAACAGGCG 58.195 61.111 0.00 0.00 0.00 5.52
2418 2501 2.437359 AGCATCTCCAACAGGCGC 60.437 61.111 0.00 0.00 0.00 6.53
2419 2502 3.869272 GCATCTCCAACAGGCGCG 61.869 66.667 0.00 0.00 0.00 6.86
2420 2503 3.869272 CATCTCCAACAGGCGCGC 61.869 66.667 25.94 25.94 0.00 6.86
2452 2535 3.378602 GCCGCAAAATCCCCCGTT 61.379 61.111 0.00 0.00 0.00 4.44
2453 2536 2.938086 GCCGCAAAATCCCCCGTTT 61.938 57.895 0.00 0.00 0.00 3.60
2454 2537 1.668867 CCGCAAAATCCCCCGTTTT 59.331 52.632 0.00 0.00 0.00 2.43
2455 2538 0.889306 CCGCAAAATCCCCCGTTTTA 59.111 50.000 0.00 0.00 0.00 1.52
2456 2539 1.272769 CCGCAAAATCCCCCGTTTTAA 59.727 47.619 0.00 0.00 0.00 1.52
2457 2540 2.330286 CGCAAAATCCCCCGTTTTAAC 58.670 47.619 0.00 0.00 0.00 2.01
2466 2549 2.745860 CGTTTTAACGCGCGCAAC 59.254 55.556 32.58 24.47 46.06 4.17
2467 2550 2.689871 CGTTTTAACGCGCGCAACC 61.690 57.895 32.58 12.06 46.06 3.77
2468 2551 2.425448 TTTTAACGCGCGCAACCG 60.425 55.556 32.58 17.34 37.57 4.44
2469 2552 3.858632 TTTTAACGCGCGCAACCGG 62.859 57.895 32.58 16.92 34.32 5.28
2474 2557 4.279535 CGCGCGCAACCGGAATAG 62.280 66.667 32.61 6.38 34.32 1.73
2475 2558 3.192922 GCGCGCAACCGGAATAGT 61.193 61.111 29.10 0.00 34.32 2.12
2476 2559 2.746803 GCGCGCAACCGGAATAGTT 61.747 57.895 29.10 0.00 34.32 2.24
2477 2560 1.060308 CGCGCAACCGGAATAGTTG 59.940 57.895 9.46 2.17 45.92 3.16
2482 2565 2.107950 CAACCGGAATAGTTGCTCCA 57.892 50.000 9.46 0.00 38.31 3.86
2483 2566 2.009774 CAACCGGAATAGTTGCTCCAG 58.990 52.381 9.46 0.00 38.31 3.86
2484 2567 0.107654 ACCGGAATAGTTGCTCCAGC 60.108 55.000 9.46 0.00 42.50 4.85
2485 2568 1.154205 CCGGAATAGTTGCTCCAGCG 61.154 60.000 0.00 0.00 45.83 5.18
2486 2569 1.154205 CGGAATAGTTGCTCCAGCGG 61.154 60.000 0.00 0.00 45.83 5.52
2487 2570 0.815615 GGAATAGTTGCTCCAGCGGG 60.816 60.000 0.00 0.00 45.83 6.13
2488 2571 1.440145 GAATAGTTGCTCCAGCGGGC 61.440 60.000 0.00 0.00 45.83 6.13
2489 2572 3.740128 ATAGTTGCTCCAGCGGGCG 62.740 63.158 0.00 0.00 45.83 6.13
2509 2592 4.947278 CGAAAACAACGCGCGGCA 62.947 61.111 35.22 0.00 0.00 5.69
2510 2593 2.428403 GAAAACAACGCGCGGCAT 60.428 55.556 35.22 17.23 0.00 4.40
2511 2594 1.154376 GAAAACAACGCGCGGCATA 60.154 52.632 35.22 0.00 0.00 3.14
2512 2595 1.392862 GAAAACAACGCGCGGCATAC 61.393 55.000 35.22 14.62 0.00 2.39
2515 2598 3.248887 CAACGCGCGGCATACGTA 61.249 61.111 35.22 0.00 46.52 3.57
2516 2599 2.952783 AACGCGCGGCATACGTAG 60.953 61.111 35.22 1.83 46.52 3.51
2517 2600 3.688475 AACGCGCGGCATACGTAGT 62.688 57.895 35.22 5.42 46.52 2.73
2518 2601 3.384399 CGCGCGGCATACGTAGTC 61.384 66.667 24.84 0.00 43.93 2.59
2519 2602 3.028590 GCGCGGCATACGTAGTCC 61.029 66.667 8.83 3.64 43.93 3.85
2520 2603 2.410060 CGCGGCATACGTAGTCCA 59.590 61.111 14.03 0.00 43.93 4.02
2521 2604 1.657487 CGCGGCATACGTAGTCCAG 60.657 63.158 14.03 8.94 43.93 3.86
2522 2605 1.949631 GCGGCATACGTAGTCCAGC 60.950 63.158 14.03 13.34 43.93 4.85
2523 2606 1.435925 CGGCATACGTAGTCCAGCA 59.564 57.895 14.03 0.00 43.93 4.41
2524 2607 0.870307 CGGCATACGTAGTCCAGCAC 60.870 60.000 14.03 2.74 43.93 4.40
2525 2608 0.870307 GGCATACGTAGTCCAGCACG 60.870 60.000 0.08 0.00 43.93 5.34
2526 2609 1.480219 GCATACGTAGTCCAGCACGC 61.480 60.000 0.08 0.00 43.93 5.34
2527 2610 1.063649 ATACGTAGTCCAGCACGCG 59.936 57.895 3.53 3.53 43.93 6.01
2528 2611 2.332362 ATACGTAGTCCAGCACGCGG 62.332 60.000 12.47 0.00 43.93 6.46
2543 2626 4.514569 CGGGCCGAAACGCAATCG 62.515 66.667 24.41 0.00 42.43 3.34
2544 2627 4.829518 GGGCCGAAACGCAATCGC 62.830 66.667 0.00 0.00 38.93 4.58
2569 2652 2.549633 GCATATTTGCTGCGTTCACT 57.450 45.000 0.35 0.00 45.77 3.41
2570 2653 2.867429 GCATATTTGCTGCGTTCACTT 58.133 42.857 0.35 0.00 45.77 3.16
2571 2654 2.848302 GCATATTTGCTGCGTTCACTTC 59.152 45.455 0.35 0.00 45.77 3.01
2572 2655 3.429085 CATATTTGCTGCGTTCACTTCC 58.571 45.455 0.00 0.00 0.00 3.46
2573 2656 0.238289 ATTTGCTGCGTTCACTTCCG 59.762 50.000 0.00 0.00 0.00 4.30
2580 2663 4.135493 GTTCACTTCCGCGCGCTC 62.135 66.667 30.48 0.59 0.00 5.03
2595 2678 4.803426 CTCGCTCGCACCTCCCAC 62.803 72.222 0.00 0.00 0.00 4.61
2602 2685 4.129148 GCACCTCCCACCCCCATC 62.129 72.222 0.00 0.00 0.00 3.51
2603 2686 3.420482 CACCTCCCACCCCCATCC 61.420 72.222 0.00 0.00 0.00 3.51
2604 2687 3.967024 ACCTCCCACCCCCATCCA 61.967 66.667 0.00 0.00 0.00 3.41
2605 2688 2.370123 CCTCCCACCCCCATCCAT 60.370 66.667 0.00 0.00 0.00 3.41
2606 2689 1.073008 CCTCCCACCCCCATCCATA 60.073 63.158 0.00 0.00 0.00 2.74
2607 2690 1.427072 CCTCCCACCCCCATCCATAC 61.427 65.000 0.00 0.00 0.00 2.39
2608 2691 1.768482 TCCCACCCCCATCCATACG 60.768 63.158 0.00 0.00 0.00 3.06
2609 2692 2.076184 CCCACCCCCATCCATACGT 61.076 63.158 0.00 0.00 0.00 3.57
2610 2693 1.148273 CCACCCCCATCCATACGTG 59.852 63.158 0.00 0.00 0.00 4.49
2611 2694 1.632018 CCACCCCCATCCATACGTGT 61.632 60.000 0.00 0.00 0.00 4.49
2612 2695 0.179056 CACCCCCATCCATACGTGTC 60.179 60.000 0.00 0.00 0.00 3.67
2613 2696 1.069090 CCCCCATCCATACGTGTCG 59.931 63.158 0.00 0.00 0.00 4.35
2614 2697 1.594293 CCCCATCCATACGTGTCGC 60.594 63.158 0.00 0.00 0.00 5.19
2616 2699 2.585869 CCATCCATACGTGTCGCGC 61.586 63.158 0.00 0.00 46.11 6.86
2617 2700 2.654085 ATCCATACGTGTCGCGCG 60.654 61.111 26.76 26.76 46.11 6.86
2649 2732 2.202285 CACGCGCGCTGCATTTTA 60.202 55.556 32.58 0.00 46.97 1.52
2650 2733 2.098298 ACGCGCGCTGCATTTTAG 59.902 55.556 32.58 12.54 46.97 1.85
2651 2734 3.307262 CGCGCGCTGCATTTTAGC 61.307 61.111 30.48 6.56 46.97 3.09
2656 2739 2.485122 GCTGCATTTTAGCGCGGT 59.515 55.556 17.70 17.70 36.85 5.68
2657 2740 1.154035 GCTGCATTTTAGCGCGGTT 60.154 52.632 19.09 0.00 36.85 4.44
2658 2741 1.405469 GCTGCATTTTAGCGCGGTTG 61.405 55.000 19.09 10.09 36.85 3.77
2659 2742 1.405469 CTGCATTTTAGCGCGGTTGC 61.405 55.000 22.01 22.01 37.31 4.17
2661 2744 1.405469 GCATTTTAGCGCGGTTGCTG 61.405 55.000 19.09 10.63 46.70 4.41
2662 2745 0.798009 CATTTTAGCGCGGTTGCTGG 60.798 55.000 19.09 0.00 46.70 4.85
2663 2746 0.958382 ATTTTAGCGCGGTTGCTGGA 60.958 50.000 19.09 0.00 46.70 3.86
2664 2747 1.573829 TTTTAGCGCGGTTGCTGGAG 61.574 55.000 19.09 0.00 46.70 3.86
2694 2777 4.481112 GCCGCGCCAAACCAGATG 62.481 66.667 0.00 0.00 0.00 2.90
2695 2778 2.745884 CCGCGCCAAACCAGATGA 60.746 61.111 0.00 0.00 0.00 2.92
2696 2779 2.114670 CCGCGCCAAACCAGATGAT 61.115 57.895 0.00 0.00 0.00 2.45
2697 2780 1.063006 CGCGCCAAACCAGATGATG 59.937 57.895 0.00 0.00 0.00 3.07
2706 2789 3.009140 CAGATGATGGACGCACGC 58.991 61.111 0.00 0.00 0.00 5.34
2707 2790 1.520120 CAGATGATGGACGCACGCT 60.520 57.895 0.00 0.00 0.00 5.07
2708 2791 0.249031 CAGATGATGGACGCACGCTA 60.249 55.000 0.00 0.00 0.00 4.26
2709 2792 0.676184 AGATGATGGACGCACGCTAT 59.324 50.000 0.00 0.00 0.00 2.97
2710 2793 1.886542 AGATGATGGACGCACGCTATA 59.113 47.619 0.00 0.00 0.00 1.31
2711 2794 2.296190 AGATGATGGACGCACGCTATAA 59.704 45.455 0.00 0.00 0.00 0.98
2712 2795 1.847818 TGATGGACGCACGCTATAAC 58.152 50.000 0.00 0.00 0.00 1.89
2713 2796 1.407618 TGATGGACGCACGCTATAACT 59.592 47.619 0.00 0.00 0.00 2.24
2714 2797 1.787155 GATGGACGCACGCTATAACTG 59.213 52.381 0.00 0.00 0.00 3.16
2715 2798 0.528924 TGGACGCACGCTATAACTGT 59.471 50.000 0.00 0.00 0.00 3.55
2716 2799 1.067425 TGGACGCACGCTATAACTGTT 60.067 47.619 0.00 0.00 0.00 3.16
2717 2800 1.997606 GGACGCACGCTATAACTGTTT 59.002 47.619 0.00 0.00 0.00 2.83
2718 2801 2.414138 GGACGCACGCTATAACTGTTTT 59.586 45.455 0.00 0.00 0.00 2.43
2719 2802 3.120442 GGACGCACGCTATAACTGTTTTT 60.120 43.478 0.00 0.00 0.00 1.94
2748 2831 3.418913 CGTTCGGCGCATGTTGGA 61.419 61.111 10.83 0.00 0.00 3.53
2749 2832 2.480555 GTTCGGCGCATGTTGGAG 59.519 61.111 10.83 0.00 0.00 3.86
2750 2833 2.032634 GTTCGGCGCATGTTGGAGA 61.033 57.895 10.83 0.00 0.00 3.71
2751 2834 1.078497 TTCGGCGCATGTTGGAGAT 60.078 52.632 10.83 0.00 0.00 2.75
2752 2835 1.368345 TTCGGCGCATGTTGGAGATG 61.368 55.000 10.83 0.00 0.00 2.90
2753 2836 2.410469 GGCGCATGTTGGAGATGC 59.590 61.111 10.83 0.00 42.41 3.91
2754 2837 2.117156 GGCGCATGTTGGAGATGCT 61.117 57.895 10.83 0.00 43.45 3.79
2755 2838 1.354506 GCGCATGTTGGAGATGCTC 59.645 57.895 0.30 0.00 43.45 4.26
2756 2839 1.640069 CGCATGTTGGAGATGCTCG 59.360 57.895 8.18 0.00 43.45 5.03
2760 2843 2.286294 GCATGTTGGAGATGCTCGTAAG 59.714 50.000 3.13 0.00 42.52 2.34
2763 2846 1.207329 GTTGGAGATGCTCGTAAGGGT 59.793 52.381 0.00 0.00 42.80 4.34
2774 2857 3.496155 CTCGTAAGGGTACTTCGTGTTC 58.504 50.000 0.00 0.00 38.14 3.18
2786 2869 2.022129 CGTGTTCGAGTCCAGCACC 61.022 63.158 0.00 0.00 39.71 5.01
2790 2873 3.858868 TTCGAGTCCAGCACCGTGC 62.859 63.158 16.04 16.04 45.46 5.34
2800 2883 2.791256 CACCGTGCGGGCAATAAG 59.209 61.111 15.44 0.00 40.62 1.73
2802 2885 0.741574 CACCGTGCGGGCAATAAGTA 60.742 55.000 15.44 0.00 40.62 2.24
2804 2887 1.157870 CCGTGCGGGCAATAAGTAGG 61.158 60.000 2.15 0.00 0.00 3.18
2805 2888 0.179094 CGTGCGGGCAATAAGTAGGA 60.179 55.000 0.00 0.00 0.00 2.94
2806 2889 1.583054 GTGCGGGCAATAAGTAGGAG 58.417 55.000 0.00 0.00 0.00 3.69
2809 2892 2.364324 TGCGGGCAATAAGTAGGAGTAG 59.636 50.000 0.00 0.00 0.00 2.57
2810 2893 2.364647 GCGGGCAATAAGTAGGAGTAGT 59.635 50.000 0.00 0.00 0.00 2.73
2811 2894 3.552478 GCGGGCAATAAGTAGGAGTAGTC 60.552 52.174 0.00 0.00 0.00 2.59
2812 2895 3.890147 CGGGCAATAAGTAGGAGTAGTCT 59.110 47.826 0.00 0.00 0.00 3.24
2813 2896 5.068636 CGGGCAATAAGTAGGAGTAGTCTA 58.931 45.833 0.00 0.00 0.00 2.59
2814 2897 5.181622 CGGGCAATAAGTAGGAGTAGTCTAG 59.818 48.000 0.00 0.00 0.00 2.43
2815 2898 6.305411 GGGCAATAAGTAGGAGTAGTCTAGA 58.695 44.000 0.00 0.00 0.00 2.43
2816 2899 6.949463 GGGCAATAAGTAGGAGTAGTCTAGAT 59.051 42.308 0.00 0.00 0.00 1.98
2817 2900 8.108364 GGGCAATAAGTAGGAGTAGTCTAGATA 58.892 40.741 0.00 0.00 0.00 1.98
2819 2902 8.949177 GCAATAAGTAGGAGTAGTCTAGATACC 58.051 40.741 0.00 0.00 0.00 2.73
2823 2906 6.536447 AGTAGGAGTAGTCTAGATACCAAGC 58.464 44.000 0.00 0.00 0.00 4.01
2824 2907 4.732065 AGGAGTAGTCTAGATACCAAGCC 58.268 47.826 0.00 0.89 0.00 4.35
2825 2908 4.417518 AGGAGTAGTCTAGATACCAAGCCT 59.582 45.833 0.00 2.85 0.00 4.58
2827 2910 4.391155 AGTAGTCTAGATACCAAGCCTCG 58.609 47.826 0.00 0.00 0.00 4.63
2829 2912 3.215975 AGTCTAGATACCAAGCCTCGAC 58.784 50.000 0.00 0.00 0.00 4.20
2833 2916 1.957877 AGATACCAAGCCTCGACTAGC 59.042 52.381 0.00 0.00 0.00 3.42
2834 2917 0.669077 ATACCAAGCCTCGACTAGCG 59.331 55.000 0.00 0.00 42.69 4.26
2835 2918 2.001361 TACCAAGCCTCGACTAGCGC 62.001 60.000 0.00 0.00 40.61 5.92
2836 2919 2.951745 CAAGCCTCGACTAGCGCG 60.952 66.667 0.00 0.00 40.61 6.86
2837 2920 4.856607 AAGCCTCGACTAGCGCGC 62.857 66.667 26.66 26.66 40.61 6.86
2866 2985 0.471780 TGTCTTGGTCTGAGCTCCCA 60.472 55.000 12.15 8.78 0.00 4.37
2893 3012 2.900838 GGCGACTCGATCCTCCGA 60.901 66.667 1.63 0.00 37.03 4.55
2997 3116 4.681978 GCAGTTCCCGTGGCTCGT 62.682 66.667 8.25 0.00 37.94 4.18
3032 3151 0.521735 CTTTTACAGCTTGCCCGACC 59.478 55.000 0.00 0.00 0.00 4.79
3097 3216 4.478371 CCGCATGCCCAGAGCTCA 62.478 66.667 17.77 0.00 44.23 4.26
3098 3217 2.437180 CGCATGCCCAGAGCTCAA 60.437 61.111 17.77 0.00 44.23 3.02
3099 3218 2.042259 CGCATGCCCAGAGCTCAAA 61.042 57.895 17.77 0.00 44.23 2.69
3100 3219 1.588824 CGCATGCCCAGAGCTCAAAA 61.589 55.000 17.77 0.00 44.23 2.44
3101 3220 0.172803 GCATGCCCAGAGCTCAAAAG 59.827 55.000 17.77 2.48 44.23 2.27
3102 3221 1.830279 CATGCCCAGAGCTCAAAAGA 58.170 50.000 17.77 0.00 44.23 2.52
3103 3222 2.165167 CATGCCCAGAGCTCAAAAGAA 58.835 47.619 17.77 0.00 44.23 2.52
3104 3223 2.363306 TGCCCAGAGCTCAAAAGAAA 57.637 45.000 17.77 0.00 44.23 2.52
3105 3224 1.956477 TGCCCAGAGCTCAAAAGAAAC 59.044 47.619 17.77 0.00 44.23 2.78
3106 3225 1.956477 GCCCAGAGCTCAAAAGAAACA 59.044 47.619 17.77 0.00 38.99 2.83
3107 3226 2.362077 GCCCAGAGCTCAAAAGAAACAA 59.638 45.455 17.77 0.00 38.99 2.83
3108 3227 3.181476 GCCCAGAGCTCAAAAGAAACAAA 60.181 43.478 17.77 0.00 38.99 2.83
3109 3228 4.614946 CCCAGAGCTCAAAAGAAACAAAG 58.385 43.478 17.77 0.00 0.00 2.77
3110 3229 4.339247 CCCAGAGCTCAAAAGAAACAAAGA 59.661 41.667 17.77 0.00 0.00 2.52
3111 3230 5.163519 CCCAGAGCTCAAAAGAAACAAAGAA 60.164 40.000 17.77 0.00 0.00 2.52
3112 3231 6.332630 CCAGAGCTCAAAAGAAACAAAGAAA 58.667 36.000 17.77 0.00 0.00 2.52
3113 3232 6.254373 CCAGAGCTCAAAAGAAACAAAGAAAC 59.746 38.462 17.77 0.00 0.00 2.78
3114 3233 6.808212 CAGAGCTCAAAAGAAACAAAGAAACA 59.192 34.615 17.77 0.00 0.00 2.83
3115 3234 7.490402 CAGAGCTCAAAAGAAACAAAGAAACAT 59.510 33.333 17.77 0.00 0.00 2.71
3116 3235 7.490402 AGAGCTCAAAAGAAACAAAGAAACATG 59.510 33.333 17.77 0.00 0.00 3.21
3117 3236 7.322664 AGCTCAAAAGAAACAAAGAAACATGA 58.677 30.769 0.00 0.00 0.00 3.07
3118 3237 7.818930 AGCTCAAAAGAAACAAAGAAACATGAA 59.181 29.630 0.00 0.00 0.00 2.57
3119 3238 8.442384 GCTCAAAAGAAACAAAGAAACATGAAA 58.558 29.630 0.00 0.00 0.00 2.69
3125 3244 9.447157 AAGAAACAAAGAAACATGAAAAATCCA 57.553 25.926 0.00 0.00 0.00 3.41
3126 3245 9.447157 AGAAACAAAGAAACATGAAAAATCCAA 57.553 25.926 0.00 0.00 0.00 3.53
3129 3248 8.961294 ACAAAGAAACATGAAAAATCCAATGA 57.039 26.923 0.00 0.00 0.00 2.57
3130 3249 9.393512 ACAAAGAAACATGAAAAATCCAATGAA 57.606 25.926 0.00 0.00 0.00 2.57
3134 3253 8.839343 AGAAACATGAAAAATCCAATGAAAACC 58.161 29.630 0.00 0.00 0.00 3.27
3135 3254 7.509141 AACATGAAAAATCCAATGAAAACCC 57.491 32.000 0.00 0.00 0.00 4.11
3136 3255 6.840527 ACATGAAAAATCCAATGAAAACCCT 58.159 32.000 0.00 0.00 0.00 4.34
3137 3256 7.972301 ACATGAAAAATCCAATGAAAACCCTA 58.028 30.769 0.00 0.00 0.00 3.53
3138 3257 8.435982 ACATGAAAAATCCAATGAAAACCCTAA 58.564 29.630 0.00 0.00 0.00 2.69
3139 3258 9.452287 CATGAAAAATCCAATGAAAACCCTAAT 57.548 29.630 0.00 0.00 0.00 1.73
3147 3266 8.713708 TCCAATGAAAACCCTAATAAGAAACA 57.286 30.769 0.00 0.00 0.00 2.83
3148 3267 9.148879 TCCAATGAAAACCCTAATAAGAAACAA 57.851 29.630 0.00 0.00 0.00 2.83
3149 3268 9.942850 CCAATGAAAACCCTAATAAGAAACAAT 57.057 29.630 0.00 0.00 0.00 2.71
3151 3270 9.942850 AATGAAAACCCTAATAAGAAACAATGG 57.057 29.630 0.00 0.00 0.00 3.16
3152 3271 8.713708 TGAAAACCCTAATAAGAAACAATGGA 57.286 30.769 0.00 0.00 0.00 3.41
3153 3272 9.148879 TGAAAACCCTAATAAGAAACAATGGAA 57.851 29.630 0.00 0.00 0.00 3.53
3154 3273 9.990360 GAAAACCCTAATAAGAAACAATGGAAA 57.010 29.630 0.00 0.00 0.00 3.13
3155 3274 9.772973 AAAACCCTAATAAGAAACAATGGAAAC 57.227 29.630 0.00 0.00 0.00 2.78
3156 3275 7.476540 ACCCTAATAAGAAACAATGGAAACC 57.523 36.000 0.00 0.00 0.00 3.27
3157 3276 7.013834 ACCCTAATAAGAAACAATGGAAACCA 58.986 34.615 0.00 0.00 38.19 3.67
3158 3277 7.511028 ACCCTAATAAGAAACAATGGAAACCAA 59.489 33.333 0.00 0.00 36.95 3.67
3159 3278 8.371699 CCCTAATAAGAAACAATGGAAACCAAA 58.628 33.333 0.00 0.00 36.95 3.28
3160 3279 9.423061 CCTAATAAGAAACAATGGAAACCAAAG 57.577 33.333 0.00 0.00 36.95 2.77
3163 3282 9.898152 AATAAGAAACAATGGAAACCAAAGAAA 57.102 25.926 0.00 0.00 36.95 2.52
3164 3283 9.898152 ATAAGAAACAATGGAAACCAAAGAAAA 57.102 25.926 0.00 0.00 36.95 2.29
3165 3284 8.628630 AAGAAACAATGGAAACCAAAGAAAAA 57.371 26.923 0.00 0.00 36.95 1.94
3197 3316 3.859411 AAAACCGAAGAAACAAGTGCA 57.141 38.095 0.00 0.00 0.00 4.57
3198 3317 3.859411 AAACCGAAGAAACAAGTGCAA 57.141 38.095 0.00 0.00 0.00 4.08
3199 3318 3.859411 AACCGAAGAAACAAGTGCAAA 57.141 38.095 0.00 0.00 0.00 3.68
3200 3319 3.859411 ACCGAAGAAACAAGTGCAAAA 57.141 38.095 0.00 0.00 0.00 2.44
3201 3320 3.769536 ACCGAAGAAACAAGTGCAAAAG 58.230 40.909 0.00 0.00 0.00 2.27
3202 3321 3.442273 ACCGAAGAAACAAGTGCAAAAGA 59.558 39.130 0.00 0.00 0.00 2.52
3203 3322 4.082463 ACCGAAGAAACAAGTGCAAAAGAA 60.082 37.500 0.00 0.00 0.00 2.52
3204 3323 5.043248 CCGAAGAAACAAGTGCAAAAGAAT 58.957 37.500 0.00 0.00 0.00 2.40
3205 3324 5.051508 CCGAAGAAACAAGTGCAAAAGAATG 60.052 40.000 0.00 0.00 0.00 2.67
3206 3325 5.743398 CGAAGAAACAAGTGCAAAAGAATGA 59.257 36.000 0.00 0.00 0.00 2.57
3207 3326 6.253298 CGAAGAAACAAGTGCAAAAGAATGAA 59.747 34.615 0.00 0.00 0.00 2.57
3208 3327 7.201427 CGAAGAAACAAGTGCAAAAGAATGAAA 60.201 33.333 0.00 0.00 0.00 2.69
3209 3328 7.903995 AGAAACAAGTGCAAAAGAATGAAAA 57.096 28.000 0.00 0.00 0.00 2.29
3210 3329 8.321650 AGAAACAAGTGCAAAAGAATGAAAAA 57.678 26.923 0.00 0.00 0.00 1.94
3211 3330 8.949177 AGAAACAAGTGCAAAAGAATGAAAAAT 58.051 25.926 0.00 0.00 0.00 1.82
3214 3333 8.947055 ACAAGTGCAAAAGAATGAAAAATAGT 57.053 26.923 0.00 0.00 0.00 2.12
3215 3334 8.819974 ACAAGTGCAAAAGAATGAAAAATAGTG 58.180 29.630 0.00 0.00 0.00 2.74
3216 3335 9.033481 CAAGTGCAAAAGAATGAAAAATAGTGA 57.967 29.630 0.00 0.00 0.00 3.41
3217 3336 9.598517 AAGTGCAAAAGAATGAAAAATAGTGAA 57.401 25.926 0.00 0.00 0.00 3.18
3218 3337 9.598517 AGTGCAAAAGAATGAAAAATAGTGAAA 57.401 25.926 0.00 0.00 0.00 2.69
3221 3340 9.650371 GCAAAAGAATGAAAAATAGTGAAAACC 57.350 29.630 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.896645 TGAGAAAATTTCACTATTAGATGCTCT 57.103 29.630 8.55 0.00 0.00 4.09
45 46 9.911788 ACCAATGTCACTAATTGATTCTATCTT 57.088 29.630 0.00 0.00 37.22 2.40
52 53 9.131791 GGGTAATACCAATGTCACTAATTGATT 57.868 33.333 12.03 0.00 41.02 2.57
53 54 8.502738 AGGGTAATACCAATGTCACTAATTGAT 58.497 33.333 12.03 0.00 41.02 2.57
54 55 7.867921 AGGGTAATACCAATGTCACTAATTGA 58.132 34.615 12.03 0.00 41.02 2.57
55 56 8.519799 AAGGGTAATACCAATGTCACTAATTG 57.480 34.615 12.03 0.00 41.02 2.32
56 57 9.847224 CTAAGGGTAATACCAATGTCACTAATT 57.153 33.333 12.03 0.00 41.02 1.40
57 58 8.437575 CCTAAGGGTAATACCAATGTCACTAAT 58.562 37.037 12.03 0.00 41.02 1.73
58 59 7.147444 CCCTAAGGGTAATACCAATGTCACTAA 60.147 40.741 12.03 0.00 41.02 2.24
59 60 6.328148 CCCTAAGGGTAATACCAATGTCACTA 59.672 42.308 12.03 0.00 41.02 2.74
60 61 5.132144 CCCTAAGGGTAATACCAATGTCACT 59.868 44.000 12.03 0.00 41.02 3.41
61 62 5.131475 TCCCTAAGGGTAATACCAATGTCAC 59.869 44.000 12.03 0.00 44.74 3.67
62 63 5.290335 TCCCTAAGGGTAATACCAATGTCA 58.710 41.667 12.03 0.00 44.74 3.58
63 64 5.899631 TCCCTAAGGGTAATACCAATGTC 57.100 43.478 12.03 0.00 44.74 3.06
64 65 5.974370 TCTTCCCTAAGGGTAATACCAATGT 59.026 40.000 12.03 0.00 44.74 2.71
65 66 6.509523 TCTTCCCTAAGGGTAATACCAATG 57.490 41.667 12.03 0.00 44.74 2.82
66 67 8.246615 TCTATCTTCCCTAAGGGTAATACCAAT 58.753 37.037 12.03 1.71 44.74 3.16
67 68 7.607511 TCTATCTTCCCTAAGGGTAATACCAA 58.392 38.462 12.03 0.00 44.74 3.67
68 69 7.183298 TCTATCTTCCCTAAGGGTAATACCA 57.817 40.000 12.03 0.00 44.74 3.25
69 70 8.502047 TTTCTATCTTCCCTAAGGGTAATACC 57.498 38.462 0.00 0.00 44.74 2.73
73 74 9.962835 TCTATTTTCTATCTTCCCTAAGGGTAA 57.037 33.333 0.00 0.00 44.74 2.85
74 75 9.962835 TTCTATTTTCTATCTTCCCTAAGGGTA 57.037 33.333 0.00 0.00 44.74 3.69
75 76 8.871570 TTCTATTTTCTATCTTCCCTAAGGGT 57.128 34.615 0.00 0.00 44.74 4.34
110 111 9.934190 GTGTGCAAGATTTTTAATCATTTGTTT 57.066 25.926 0.00 0.00 0.00 2.83
111 112 9.107177 TGTGTGCAAGATTTTTAATCATTTGTT 57.893 25.926 0.00 0.00 0.00 2.83
112 113 8.659925 TGTGTGCAAGATTTTTAATCATTTGT 57.340 26.923 0.00 0.00 0.00 2.83
117 118 9.107177 ACAAATTGTGTGCAAGATTTTTAATCA 57.893 25.926 0.00 0.00 39.72 2.57
120 121 9.809096 TCTACAAATTGTGTGCAAGATTTTTAA 57.191 25.926 9.15 0.00 41.89 1.52
121 122 9.809096 TTCTACAAATTGTGTGCAAGATTTTTA 57.191 25.926 9.15 0.00 41.89 1.52
122 123 8.715191 TTCTACAAATTGTGTGCAAGATTTTT 57.285 26.923 9.15 0.00 41.89 1.94
123 124 8.715191 TTTCTACAAATTGTGTGCAAGATTTT 57.285 26.923 9.15 0.00 41.89 1.82
124 125 8.715191 TTTTCTACAAATTGTGTGCAAGATTT 57.285 26.923 9.15 0.00 41.89 2.17
125 126 8.715191 TTTTTCTACAAATTGTGTGCAAGATT 57.285 26.923 9.15 0.00 41.89 2.40
126 127 8.767085 CATTTTTCTACAAATTGTGTGCAAGAT 58.233 29.630 9.15 0.00 41.89 2.40
127 128 7.254387 GCATTTTTCTACAAATTGTGTGCAAGA 60.254 33.333 9.15 0.00 41.89 3.02
128 129 6.847289 GCATTTTTCTACAAATTGTGTGCAAG 59.153 34.615 9.15 0.00 41.89 4.01
129 130 6.314648 TGCATTTTTCTACAAATTGTGTGCAA 59.685 30.769 9.15 0.00 41.89 4.08
130 131 5.814188 TGCATTTTTCTACAAATTGTGTGCA 59.186 32.000 9.15 10.09 41.89 4.57
131 132 6.128729 GTGCATTTTTCTACAAATTGTGTGC 58.871 36.000 9.15 7.93 41.89 4.57
132 133 7.231705 TGTGCATTTTTCTACAAATTGTGTG 57.768 32.000 9.15 1.92 41.89 3.82
133 134 8.436046 AATGTGCATTTTTCTACAAATTGTGT 57.564 26.923 9.15 0.00 44.82 3.72
134 135 9.372541 GAAATGTGCATTTTTCTACAAATTGTG 57.627 29.630 9.15 0.00 40.77 3.33
135 136 9.328845 AGAAATGTGCATTTTTCTACAAATTGT 57.671 25.926 19.48 3.43 40.77 2.71
136 137 9.588774 CAGAAATGTGCATTTTTCTACAAATTG 57.411 29.630 20.09 8.72 39.53 2.32
137 138 9.328845 ACAGAAATGTGCATTTTTCTACAAATT 57.671 25.926 20.09 0.47 39.53 1.82
138 139 8.891671 ACAGAAATGTGCATTTTTCTACAAAT 57.108 26.923 20.09 7.15 39.53 2.32
139 140 9.809096 TTACAGAAATGTGCATTTTTCTACAAA 57.191 25.926 20.09 13.95 39.53 2.83
140 141 9.809096 TTTACAGAAATGTGCATTTTTCTACAA 57.191 25.926 20.09 15.39 39.53 2.41
141 142 9.979578 ATTTACAGAAATGTGCATTTTTCTACA 57.020 25.926 20.09 11.84 39.53 2.74
234 235 9.150028 TGGGTGTGTGTTAGTATATACATATGT 57.850 33.333 13.93 13.93 0.00 2.29
235 236 9.990360 TTGGGTGTGTGTTAGTATATACATATG 57.010 33.333 15.18 0.00 0.00 1.78
236 237 9.991906 GTTGGGTGTGTGTTAGTATATACATAT 57.008 33.333 15.18 0.00 0.00 1.78
237 238 8.979534 TGTTGGGTGTGTGTTAGTATATACATA 58.020 33.333 15.18 2.44 0.00 2.29
238 239 7.853299 TGTTGGGTGTGTGTTAGTATATACAT 58.147 34.615 15.18 3.33 0.00 2.29
239 240 7.242322 TGTTGGGTGTGTGTTAGTATATACA 57.758 36.000 15.18 0.00 0.00 2.29
240 241 8.726870 AATGTTGGGTGTGTGTTAGTATATAC 57.273 34.615 4.60 4.60 0.00 1.47
242 243 9.169592 GTAAATGTTGGGTGTGTGTTAGTATAT 57.830 33.333 0.00 0.00 0.00 0.86
243 244 8.155510 TGTAAATGTTGGGTGTGTGTTAGTATA 58.844 33.333 0.00 0.00 0.00 1.47
244 245 6.999272 TGTAAATGTTGGGTGTGTGTTAGTAT 59.001 34.615 0.00 0.00 0.00 2.12
245 246 6.260493 GTGTAAATGTTGGGTGTGTGTTAGTA 59.740 38.462 0.00 0.00 0.00 1.82
246 247 5.066764 GTGTAAATGTTGGGTGTGTGTTAGT 59.933 40.000 0.00 0.00 0.00 2.24
247 248 5.066634 TGTGTAAATGTTGGGTGTGTGTTAG 59.933 40.000 0.00 0.00 0.00 2.34
248 249 4.948004 TGTGTAAATGTTGGGTGTGTGTTA 59.052 37.500 0.00 0.00 0.00 2.41
249 250 3.764434 TGTGTAAATGTTGGGTGTGTGTT 59.236 39.130 0.00 0.00 0.00 3.32
250 251 3.357203 TGTGTAAATGTTGGGTGTGTGT 58.643 40.909 0.00 0.00 0.00 3.72
251 252 4.582701 ATGTGTAAATGTTGGGTGTGTG 57.417 40.909 0.00 0.00 0.00 3.82
252 253 5.336372 GCATATGTGTAAATGTTGGGTGTGT 60.336 40.000 4.29 0.00 0.00 3.72
253 254 5.101628 GCATATGTGTAAATGTTGGGTGTG 58.898 41.667 4.29 0.00 0.00 3.82
254 255 4.769488 TGCATATGTGTAAATGTTGGGTGT 59.231 37.500 4.29 0.00 0.00 4.16
255 256 5.321959 TGCATATGTGTAAATGTTGGGTG 57.678 39.130 4.29 0.00 0.00 4.61
256 257 6.605194 TGTATGCATATGTGTAAATGTTGGGT 59.395 34.615 10.16 0.00 0.00 4.51
257 258 6.917477 GTGTATGCATATGTGTAAATGTTGGG 59.083 38.462 10.16 0.00 0.00 4.12
258 259 7.479150 TGTGTATGCATATGTGTAAATGTTGG 58.521 34.615 10.16 0.00 0.00 3.77
267 268 9.394767 TCTTCTTTTATGTGTATGCATATGTGT 57.605 29.630 10.16 0.17 32.16 3.72
268 269 9.655769 GTCTTCTTTTATGTGTATGCATATGTG 57.344 33.333 10.16 0.00 32.16 3.21
269 270 9.618890 AGTCTTCTTTTATGTGTATGCATATGT 57.381 29.630 10.16 0.00 32.16 2.29
271 272 9.836864 TGAGTCTTCTTTTATGTGTATGCATAT 57.163 29.630 10.16 0.00 32.16 1.78
272 273 9.665719 TTGAGTCTTCTTTTATGTGTATGCATA 57.334 29.630 1.16 1.16 0.00 3.14
273 274 8.565896 TTGAGTCTTCTTTTATGTGTATGCAT 57.434 30.769 3.79 3.79 0.00 3.96
274 275 7.877612 TCTTGAGTCTTCTTTTATGTGTATGCA 59.122 33.333 0.00 0.00 0.00 3.96
275 276 8.256611 TCTTGAGTCTTCTTTTATGTGTATGC 57.743 34.615 0.00 0.00 0.00 3.14
310 311 9.267084 ACTTTTTATGTGTGTTTGTTTCTGTTT 57.733 25.926 0.00 0.00 0.00 2.83
311 312 8.825667 ACTTTTTATGTGTGTTTGTTTCTGTT 57.174 26.923 0.00 0.00 0.00 3.16
312 313 9.915629 TTACTTTTTATGTGTGTTTGTTTCTGT 57.084 25.926 0.00 0.00 0.00 3.41
341 342 3.866327 GTGTAAATGTTGGGTGCGTTTTT 59.134 39.130 0.00 0.00 0.00 1.94
342 343 3.119101 TGTGTAAATGTTGGGTGCGTTTT 60.119 39.130 0.00 0.00 0.00 2.43
343 344 2.427453 TGTGTAAATGTTGGGTGCGTTT 59.573 40.909 0.00 0.00 0.00 3.60
344 345 2.025155 TGTGTAAATGTTGGGTGCGTT 58.975 42.857 0.00 0.00 0.00 4.84
345 346 1.681538 TGTGTAAATGTTGGGTGCGT 58.318 45.000 0.00 0.00 0.00 5.24
346 347 4.427096 TTATGTGTAAATGTTGGGTGCG 57.573 40.909 0.00 0.00 0.00 5.34
347 348 5.533482 TGTTTATGTGTAAATGTTGGGTGC 58.467 37.500 0.00 0.00 32.76 5.01
348 349 9.698309 TTTATGTTTATGTGTAAATGTTGGGTG 57.302 29.630 0.00 0.00 32.76 4.61
395 396 5.799213 TGTGTGTTTGTTTCTGGGATTTTT 58.201 33.333 0.00 0.00 0.00 1.94
396 397 5.413309 TGTGTGTTTGTTTCTGGGATTTT 57.587 34.783 0.00 0.00 0.00 1.82
397 398 5.612725 ATGTGTGTTTGTTTCTGGGATTT 57.387 34.783 0.00 0.00 0.00 2.17
398 399 6.723298 TTATGTGTGTTTGTTTCTGGGATT 57.277 33.333 0.00 0.00 0.00 3.01
399 400 6.723298 TTTATGTGTGTTTGTTTCTGGGAT 57.277 33.333 0.00 0.00 0.00 3.85
400 401 6.531503 TTTTATGTGTGTTTGTTTCTGGGA 57.468 33.333 0.00 0.00 0.00 4.37
401 402 7.038659 TCTTTTTATGTGTGTTTGTTTCTGGG 58.961 34.615 0.00 0.00 0.00 4.45
402 403 8.472683 TTCTTTTTATGTGTGTTTGTTTCTGG 57.527 30.769 0.00 0.00 0.00 3.86
427 428 4.400529 AGAAAACCGGTTCATGCTTTTT 57.599 36.364 22.53 8.44 0.00 1.94
428 429 4.400529 AAGAAAACCGGTTCATGCTTTT 57.599 36.364 22.53 9.28 0.00 2.27
429 430 4.400529 AAAGAAAACCGGTTCATGCTTT 57.599 36.364 22.53 18.81 0.00 3.51
430 431 5.722021 ATAAAGAAAACCGGTTCATGCTT 57.278 34.783 22.53 13.51 0.00 3.91
431 432 7.404671 AATATAAAGAAAACCGGTTCATGCT 57.595 32.000 22.53 7.05 0.00 3.79
432 433 8.403236 AGTAATATAAAGAAAACCGGTTCATGC 58.597 33.333 22.53 4.27 0.00 4.06
433 434 9.716507 CAGTAATATAAAGAAAACCGGTTCATG 57.283 33.333 22.53 0.45 0.00 3.07
434 435 9.457436 ACAGTAATATAAAGAAAACCGGTTCAT 57.543 29.630 22.53 13.12 0.00 2.57
435 436 8.851541 ACAGTAATATAAAGAAAACCGGTTCA 57.148 30.769 22.53 2.24 0.00 3.18
436 437 8.938906 TGACAGTAATATAAAGAAAACCGGTTC 58.061 33.333 22.53 9.57 0.00 3.62
437 438 8.851541 TGACAGTAATATAAAGAAAACCGGTT 57.148 30.769 15.86 15.86 0.00 4.44
438 439 8.851541 TTGACAGTAATATAAAGAAAACCGGT 57.148 30.769 0.00 0.00 0.00 5.28
456 457 9.399797 TCTATGATGCTTTTGATATTTGACAGT 57.600 29.630 0.00 0.00 0.00 3.55
466 467 9.798994 GAAGACAAATTCTATGATGCTTTTGAT 57.201 29.630 0.00 0.00 32.51 2.57
467 468 7.964559 CGAAGACAAATTCTATGATGCTTTTGA 59.035 33.333 0.00 0.00 32.51 2.69
468 469 7.964559 TCGAAGACAAATTCTATGATGCTTTTG 59.035 33.333 0.00 0.00 32.51 2.44
469 470 8.044060 TCGAAGACAAATTCTATGATGCTTTT 57.956 30.769 0.00 0.00 32.51 2.27
470 471 7.615582 TCGAAGACAAATTCTATGATGCTTT 57.384 32.000 0.00 0.00 32.51 3.51
471 472 7.615582 TTCGAAGACAAATTCTATGATGCTT 57.384 32.000 0.00 0.00 34.32 3.91
472 473 7.798596 ATTCGAAGACAAATTCTATGATGCT 57.201 32.000 3.35 0.00 34.32 3.79
473 474 8.847444 AAATTCGAAGACAAATTCTATGATGC 57.153 30.769 3.35 0.00 34.32 3.91
484 485 9.932699 TCGTGTTAATTTAAATTCGAAGACAAA 57.067 25.926 16.56 3.79 34.32 2.83
485 486 9.372541 GTCGTGTTAATTTAAATTCGAAGACAA 57.627 29.630 16.56 1.74 34.32 3.18
486 487 8.767085 AGTCGTGTTAATTTAAATTCGAAGACA 58.233 29.630 16.56 11.61 34.32 3.41
487 488 9.247562 GAGTCGTGTTAATTTAAATTCGAAGAC 57.752 33.333 16.56 17.78 34.32 3.01
488 489 8.157813 CGAGTCGTGTTAATTTAAATTCGAAGA 58.842 33.333 16.56 8.77 0.00 2.87
489 490 8.157813 TCGAGTCGTGTTAATTTAAATTCGAAG 58.842 33.333 16.56 12.93 0.00 3.79
490 491 7.946237 GTCGAGTCGTGTTAATTTAAATTCGAA 59.054 33.333 16.56 0.00 0.00 3.71
491 492 7.114670 TGTCGAGTCGTGTTAATTTAAATTCGA 59.885 33.333 16.56 15.52 0.00 3.71
492 493 7.221970 TGTCGAGTCGTGTTAATTTAAATTCG 58.778 34.615 16.56 13.63 0.00 3.34
493 494 8.922738 TTGTCGAGTCGTGTTAATTTAAATTC 57.077 30.769 16.56 4.86 0.00 2.17
494 495 9.161684 GTTTGTCGAGTCGTGTTAATTTAAATT 57.838 29.630 17.18 17.18 0.00 1.82
495 496 8.336806 TGTTTGTCGAGTCGTGTTAATTTAAAT 58.663 29.630 13.12 0.00 0.00 1.40
496 497 7.635587 GTGTTTGTCGAGTCGTGTTAATTTAAA 59.364 33.333 13.12 0.00 0.00 1.52
497 498 7.118724 GTGTTTGTCGAGTCGTGTTAATTTAA 58.881 34.615 13.12 0.00 0.00 1.52
498 499 6.560068 CGTGTTTGTCGAGTCGTGTTAATTTA 60.560 38.462 13.12 0.00 0.00 1.40
499 500 5.495502 GTGTTTGTCGAGTCGTGTTAATTT 58.504 37.500 13.12 0.00 0.00 1.82
500 501 4.317558 CGTGTTTGTCGAGTCGTGTTAATT 60.318 41.667 13.12 0.00 0.00 1.40
501 502 3.180980 CGTGTTTGTCGAGTCGTGTTAAT 59.819 43.478 13.12 0.00 0.00 1.40
502 503 2.531103 CGTGTTTGTCGAGTCGTGTTAA 59.469 45.455 13.12 1.27 0.00 2.01
503 504 2.110990 CGTGTTTGTCGAGTCGTGTTA 58.889 47.619 13.12 0.00 0.00 2.41
504 505 0.918619 CGTGTTTGTCGAGTCGTGTT 59.081 50.000 13.12 0.00 0.00 3.32
505 506 1.477030 GCGTGTTTGTCGAGTCGTGT 61.477 55.000 13.12 0.00 0.00 4.49
506 507 1.198397 GCGTGTTTGTCGAGTCGTG 59.802 57.895 13.12 0.00 0.00 4.35
507 508 1.947642 GGCGTGTTTGTCGAGTCGT 60.948 57.895 13.12 0.00 0.00 4.34
508 509 2.654912 GGGCGTGTTTGTCGAGTCG 61.655 63.158 6.09 6.09 0.00 4.18
509 510 1.593209 TGGGCGTGTTTGTCGAGTC 60.593 57.895 0.00 0.00 0.00 3.36
510 511 1.885850 GTGGGCGTGTTTGTCGAGT 60.886 57.895 0.00 0.00 0.00 4.18
511 512 0.319211 TAGTGGGCGTGTTTGTCGAG 60.319 55.000 0.00 0.00 0.00 4.04
512 513 0.104487 TTAGTGGGCGTGTTTGTCGA 59.896 50.000 0.00 0.00 0.00 4.20
513 514 0.938713 TTTAGTGGGCGTGTTTGTCG 59.061 50.000 0.00 0.00 0.00 4.35
514 515 3.636282 ATTTTAGTGGGCGTGTTTGTC 57.364 42.857 0.00 0.00 0.00 3.18
515 516 4.139038 AGTATTTTAGTGGGCGTGTTTGT 58.861 39.130 0.00 0.00 0.00 2.83
516 517 4.668177 CGAGTATTTTAGTGGGCGTGTTTG 60.668 45.833 0.00 0.00 0.00 2.93
517 518 3.434299 CGAGTATTTTAGTGGGCGTGTTT 59.566 43.478 0.00 0.00 0.00 2.83
518 519 2.997986 CGAGTATTTTAGTGGGCGTGTT 59.002 45.455 0.00 0.00 0.00 3.32
519 520 2.613691 CGAGTATTTTAGTGGGCGTGT 58.386 47.619 0.00 0.00 0.00 4.49
520 521 1.931172 CCGAGTATTTTAGTGGGCGTG 59.069 52.381 0.00 0.00 0.00 5.34
521 522 1.741394 GCCGAGTATTTTAGTGGGCGT 60.741 52.381 0.49 0.00 41.96 5.68
522 523 0.935196 GCCGAGTATTTTAGTGGGCG 59.065 55.000 0.49 0.00 41.96 6.13
524 525 1.578583 CGGCCGAGTATTTTAGTGGG 58.421 55.000 24.07 0.00 0.00 4.61
525 526 0.935196 GCGGCCGAGTATTTTAGTGG 59.065 55.000 33.48 0.00 0.00 4.00
526 527 0.935196 GGCGGCCGAGTATTTTAGTG 59.065 55.000 33.48 0.00 0.00 2.74
527 528 0.828677 AGGCGGCCGAGTATTTTAGT 59.171 50.000 33.48 0.00 0.00 2.24
528 529 1.217882 CAGGCGGCCGAGTATTTTAG 58.782 55.000 33.48 2.96 0.00 1.85
529 530 0.538118 ACAGGCGGCCGAGTATTTTA 59.462 50.000 33.48 0.00 0.00 1.52
530 531 0.743345 GACAGGCGGCCGAGTATTTT 60.743 55.000 33.48 4.82 0.00 1.82
531 532 1.153429 GACAGGCGGCCGAGTATTT 60.153 57.895 33.48 6.74 0.00 1.40
532 533 2.298158 CTGACAGGCGGCCGAGTATT 62.298 60.000 33.48 8.05 0.00 1.89
533 534 2.758327 TGACAGGCGGCCGAGTAT 60.758 61.111 33.48 11.29 0.00 2.12
534 535 3.449227 CTGACAGGCGGCCGAGTA 61.449 66.667 33.48 7.07 0.00 2.59
536 537 4.803426 GTCTGACAGGCGGCCGAG 62.803 72.222 33.48 20.30 0.00 4.63
543 544 2.941453 TCATTAGACGTCTGACAGGC 57.059 50.000 28.12 0.00 0.00 4.85
544 545 8.353684 AGTATTAATCATTAGACGTCTGACAGG 58.646 37.037 28.12 13.17 0.00 4.00
545 546 9.388346 GAGTATTAATCATTAGACGTCTGACAG 57.612 37.037 28.12 15.64 0.00 3.51
546 547 8.899771 TGAGTATTAATCATTAGACGTCTGACA 58.100 33.333 28.12 12.08 0.00 3.58
547 548 9.171701 GTGAGTATTAATCATTAGACGTCTGAC 57.828 37.037 28.12 4.60 0.00 3.51
548 549 8.068380 CGTGAGTATTAATCATTAGACGTCTGA 58.932 37.037 28.12 20.78 0.00 3.27
549 550 7.149112 GCGTGAGTATTAATCATTAGACGTCTG 60.149 40.741 28.12 12.59 0.00 3.51
550 551 6.856938 GCGTGAGTATTAATCATTAGACGTCT 59.143 38.462 23.66 23.66 0.00 4.18
551 552 6.856938 AGCGTGAGTATTAATCATTAGACGTC 59.143 38.462 7.70 7.70 0.00 4.34
552 553 6.736123 AGCGTGAGTATTAATCATTAGACGT 58.264 36.000 0.00 0.00 0.00 4.34
553 554 8.723777 TTAGCGTGAGTATTAATCATTAGACG 57.276 34.615 0.00 0.00 0.00 4.18
566 567 8.175716 GCAAACTTTCTTAATTAGCGTGAGTAT 58.824 33.333 0.00 0.00 0.00 2.12
567 568 7.171848 TGCAAACTTTCTTAATTAGCGTGAGTA 59.828 33.333 0.00 0.00 0.00 2.59
568 569 6.017440 TGCAAACTTTCTTAATTAGCGTGAGT 60.017 34.615 0.00 0.00 0.00 3.41
569 570 6.370593 TGCAAACTTTCTTAATTAGCGTGAG 58.629 36.000 0.00 0.00 0.00 3.51
570 571 6.307031 TGCAAACTTTCTTAATTAGCGTGA 57.693 33.333 0.00 0.00 0.00 4.35
571 572 6.452872 GCATGCAAACTTTCTTAATTAGCGTG 60.453 38.462 14.21 0.00 38.95 5.34
572 573 5.572896 GCATGCAAACTTTCTTAATTAGCGT 59.427 36.000 14.21 0.00 0.00 5.07
573 574 5.572511 TGCATGCAAACTTTCTTAATTAGCG 59.427 36.000 20.30 0.00 0.00 4.26
574 575 6.949578 TGCATGCAAACTTTCTTAATTAGC 57.050 33.333 20.30 0.00 0.00 3.09
575 576 7.043854 CCGATGCATGCAAACTTTCTTAATTAG 60.044 37.037 26.68 3.34 0.00 1.73
576 577 6.751425 CCGATGCATGCAAACTTTCTTAATTA 59.249 34.615 26.68 0.00 0.00 1.40
577 578 5.577945 CCGATGCATGCAAACTTTCTTAATT 59.422 36.000 26.68 2.31 0.00 1.40
578 579 5.104374 CCGATGCATGCAAACTTTCTTAAT 58.896 37.500 26.68 2.55 0.00 1.40
579 580 4.484236 CCGATGCATGCAAACTTTCTTAA 58.516 39.130 26.68 0.00 0.00 1.85
580 581 3.673052 GCCGATGCATGCAAACTTTCTTA 60.673 43.478 26.68 0.00 37.47 2.10
581 582 2.927871 GCCGATGCATGCAAACTTTCTT 60.928 45.455 26.68 4.93 37.47 2.52
582 583 1.403249 GCCGATGCATGCAAACTTTCT 60.403 47.619 26.68 5.83 37.47 2.52
583 584 0.994263 GCCGATGCATGCAAACTTTC 59.006 50.000 26.68 16.14 37.47 2.62
584 585 0.317799 TGCCGATGCATGCAAACTTT 59.682 45.000 26.68 7.61 44.23 2.66
585 586 1.965990 TGCCGATGCATGCAAACTT 59.034 47.368 26.68 8.07 44.23 2.66
586 587 3.684113 TGCCGATGCATGCAAACT 58.316 50.000 26.68 8.52 44.23 2.66
595 596 3.344215 CAGCCGATCTGCCGATGC 61.344 66.667 5.40 0.00 35.78 3.91
602 603 1.444917 ATGTGCATGCAGCCGATCTG 61.445 55.000 23.41 1.00 44.83 2.90
603 604 1.153025 ATGTGCATGCAGCCGATCT 60.153 52.632 23.41 0.00 44.83 2.75
604 605 1.008881 CATGTGCATGCAGCCGATC 60.009 57.895 23.41 8.85 44.83 3.69
605 606 2.486663 CCATGTGCATGCAGCCGAT 61.487 57.895 23.41 8.11 44.83 4.18
606 607 2.533974 TACCATGTGCATGCAGCCGA 62.534 55.000 23.41 5.82 44.83 5.54
607 608 2.055310 CTACCATGTGCATGCAGCCG 62.055 60.000 23.41 11.88 44.83 5.52
608 609 1.731700 CTACCATGTGCATGCAGCC 59.268 57.895 23.41 11.34 44.83 4.85
609 610 1.065273 GCTACCATGTGCATGCAGC 59.935 57.895 23.41 15.49 45.96 5.25
610 611 1.354155 CGCTACCATGTGCATGCAG 59.646 57.895 23.41 12.18 37.49 4.41
611 612 2.763273 GCGCTACCATGTGCATGCA 61.763 57.895 18.46 18.46 42.40 3.96
612 613 2.025156 GCGCTACCATGTGCATGC 59.975 61.111 11.82 11.82 42.40 4.06
613 614 1.645455 GAGCGCTACCATGTGCATG 59.355 57.895 11.50 5.26 44.96 4.06
614 615 1.884464 CGAGCGCTACCATGTGCAT 60.884 57.895 11.50 0.00 44.96 3.96
615 616 2.509111 CGAGCGCTACCATGTGCA 60.509 61.111 11.50 0.00 44.96 4.57
616 617 2.509336 ACGAGCGCTACCATGTGC 60.509 61.111 11.50 0.00 43.09 4.57
617 618 1.153842 TGACGAGCGCTACCATGTG 60.154 57.895 11.50 0.00 0.00 3.21
618 619 1.153823 GTGACGAGCGCTACCATGT 60.154 57.895 11.50 3.88 0.00 3.21
619 620 2.224217 CGTGACGAGCGCTACCATG 61.224 63.158 11.50 10.41 0.00 3.66
620 621 2.102357 CGTGACGAGCGCTACCAT 59.898 61.111 11.50 0.00 0.00 3.55
621 622 3.359523 ACGTGACGAGCGCTACCA 61.360 61.111 11.50 5.74 0.00 3.25
622 623 2.874780 CACGTGACGAGCGCTACC 60.875 66.667 11.50 2.58 0.00 3.18
623 624 3.533691 GCACGTGACGAGCGCTAC 61.534 66.667 22.23 3.35 33.66 3.58
624 625 3.336715 ATGCACGTGACGAGCGCTA 62.337 57.895 22.23 5.68 45.48 4.26
625 626 4.724602 ATGCACGTGACGAGCGCT 62.725 61.111 22.23 11.27 45.48 5.92
626 627 4.489795 CATGCACGTGACGAGCGC 62.490 66.667 22.23 15.61 45.48 5.92
627 628 2.271024 CTTCATGCACGTGACGAGCG 62.271 60.000 22.23 9.16 45.48 5.03
628 629 1.284982 ACTTCATGCACGTGACGAGC 61.285 55.000 22.23 19.99 43.12 5.03
629 630 0.436150 CACTTCATGCACGTGACGAG 59.564 55.000 22.23 4.60 0.00 4.18
630 631 2.516486 CACTTCATGCACGTGACGA 58.484 52.632 22.23 8.89 0.00 4.20
658 659 8.923270 TTGAAAAACAATTTAGGATCAGTCCTT 58.077 29.630 1.81 0.00 41.79 3.36
659 660 8.477419 TTGAAAAACAATTTAGGATCAGTCCT 57.523 30.769 2.16 2.16 44.33 3.85
660 661 7.329471 GCTTGAAAAACAATTTAGGATCAGTCC 59.671 37.037 0.00 0.00 40.16 3.85
661 662 7.061094 CGCTTGAAAAACAATTTAGGATCAGTC 59.939 37.037 0.00 0.00 37.88 3.51
662 663 6.863126 CGCTTGAAAAACAATTTAGGATCAGT 59.137 34.615 0.00 0.00 37.88 3.41
663 664 7.061094 GTCGCTTGAAAAACAATTTAGGATCAG 59.939 37.037 0.00 0.00 37.88 2.90
664 665 6.861055 GTCGCTTGAAAAACAATTTAGGATCA 59.139 34.615 0.00 0.00 37.88 2.92
665 666 7.061094 CAGTCGCTTGAAAAACAATTTAGGATC 59.939 37.037 0.00 0.00 37.88 3.36
666 667 6.863126 CAGTCGCTTGAAAAACAATTTAGGAT 59.137 34.615 0.00 0.00 37.88 3.24
667 668 6.038825 TCAGTCGCTTGAAAAACAATTTAGGA 59.961 34.615 0.00 0.00 37.88 2.94
668 669 6.205784 TCAGTCGCTTGAAAAACAATTTAGG 58.794 36.000 0.00 0.00 37.88 2.69
669 670 7.643764 TCTTCAGTCGCTTGAAAAACAATTTAG 59.356 33.333 3.59 0.00 36.69 1.85
670 671 7.476667 TCTTCAGTCGCTTGAAAAACAATTTA 58.523 30.769 3.59 0.00 36.69 1.40
671 672 6.329496 TCTTCAGTCGCTTGAAAAACAATTT 58.671 32.000 3.59 0.00 36.69 1.82
672 673 5.890334 TCTTCAGTCGCTTGAAAAACAATT 58.110 33.333 3.59 0.00 36.69 2.32
673 674 5.066505 ACTCTTCAGTCGCTTGAAAAACAAT 59.933 36.000 3.59 0.00 36.69 2.71
674 675 4.394920 ACTCTTCAGTCGCTTGAAAAACAA 59.605 37.500 3.59 0.00 36.69 2.83
675 676 3.938963 ACTCTTCAGTCGCTTGAAAAACA 59.061 39.130 3.59 0.00 36.69 2.83
676 677 4.537936 ACTCTTCAGTCGCTTGAAAAAC 57.462 40.909 3.59 0.00 36.69 2.43
677 678 4.211374 GCTACTCTTCAGTCGCTTGAAAAA 59.789 41.667 3.59 0.00 38.13 1.94
678 679 3.741344 GCTACTCTTCAGTCGCTTGAAAA 59.259 43.478 3.59 0.00 38.13 2.29
679 680 3.005897 AGCTACTCTTCAGTCGCTTGAAA 59.994 43.478 0.00 0.00 46.86 2.69
680 681 2.558795 AGCTACTCTTCAGTCGCTTGAA 59.441 45.455 0.00 2.23 46.86 2.69
681 682 2.163509 AGCTACTCTTCAGTCGCTTGA 58.836 47.619 0.00 0.00 46.86 3.02
682 683 2.645730 AGCTACTCTTCAGTCGCTTG 57.354 50.000 0.00 0.00 46.86 4.01
683 684 4.218852 ACTTTAGCTACTCTTCAGTCGCTT 59.781 41.667 6.49 0.00 46.86 4.68
685 686 3.854809 CACTTTAGCTACTCTTCAGTCGC 59.145 47.826 0.00 0.00 40.83 5.19
686 687 5.298197 TCACTTTAGCTACTCTTCAGTCG 57.702 43.478 0.00 0.00 33.62 4.18
687 688 6.915349 TCTTCACTTTAGCTACTCTTCAGTC 58.085 40.000 0.00 0.00 33.62 3.51
688 689 6.902771 TCTTCACTTTAGCTACTCTTCAGT 57.097 37.500 0.00 0.00 36.55 3.41
689 690 8.594881 TTTTCTTCACTTTAGCTACTCTTCAG 57.405 34.615 0.00 0.00 0.00 3.02
690 691 8.958119 TTTTTCTTCACTTTAGCTACTCTTCA 57.042 30.769 0.00 0.00 0.00 3.02
712 713 1.001378 GGAGACGCATGCAGTGTTTTT 60.001 47.619 19.57 0.00 42.04 1.94
729 730 1.152440 AGGAGCCCCTCGTATGGAG 60.152 63.158 0.00 0.00 38.86 3.86
730 731 3.025107 AGGAGCCCCTCGTATGGA 58.975 61.111 0.00 0.00 38.86 3.41
752 758 1.782181 GAAGCTTCGAGGTTCGTGC 59.218 57.895 11.40 9.68 41.96 5.34
777 783 4.753233 AGCAATCGCATCTGGAGATATAC 58.247 43.478 0.00 0.00 42.27 1.47
792 798 3.499737 GCCGTGTGGGAGCAATCG 61.500 66.667 0.00 0.00 38.47 3.34
907 920 0.532573 CTTCCGCAAGCTAGTGAGGA 59.467 55.000 6.77 6.77 44.63 3.71
909 922 1.203523 ACTCTTCCGCAAGCTAGTGAG 59.796 52.381 0.00 0.00 0.00 3.51
982 995 1.209019 CATGGTCCAGGTCTCCAAGAG 59.791 57.143 0.00 0.00 34.80 2.85
990 1003 2.439156 GGCAGCATGGTCCAGGTC 60.439 66.667 5.25 0.00 35.86 3.85
991 1004 2.844195 TTGGCAGCATGGTCCAGGT 61.844 57.895 5.25 0.00 35.86 4.00
992 1005 2.036098 TTGGCAGCATGGTCCAGG 59.964 61.111 13.36 0.00 35.86 4.45
993 1006 1.303888 AGTTGGCAGCATGGTCCAG 60.304 57.895 3.63 0.00 35.86 3.86
994 1007 1.303561 GAGTTGGCAGCATGGTCCA 60.304 57.895 3.63 10.74 35.86 4.02
995 1008 2.401766 CGAGTTGGCAGCATGGTCC 61.402 63.158 3.63 0.17 35.86 4.46
996 1009 1.237285 AACGAGTTGGCAGCATGGTC 61.237 55.000 3.63 0.00 35.86 4.02
997 1010 0.823356 AAACGAGTTGGCAGCATGGT 60.823 50.000 3.63 0.00 35.86 3.55
1086 1099 0.249073 CGGTGGCTATGAACTCCGAG 60.249 60.000 0.00 0.00 40.29 4.63
1168 1181 5.064071 GCGAGATGATCATGTATACGAGAGA 59.936 44.000 14.30 0.00 0.00 3.10
1176 1212 2.928301 GCACCGCGAGATGATCATGTAT 60.928 50.000 14.30 0.00 0.00 2.29
1183 1219 1.520120 CACAGCACCGCGAGATGAT 60.520 57.895 20.48 6.83 0.00 2.45
1184 1220 2.125952 CACAGCACCGCGAGATGA 60.126 61.111 20.48 0.00 0.00 2.92
1188 1224 3.705638 CACACACAGCACCGCGAG 61.706 66.667 8.23 0.00 0.00 5.03
1191 1227 1.436195 TTCTTCACACACAGCACCGC 61.436 55.000 0.00 0.00 0.00 5.68
1207 1243 6.352516 TGCCATACAAACCAAACAAAATTCT 58.647 32.000 0.00 0.00 0.00 2.40
1214 1258 1.967066 CCCTGCCATACAAACCAAACA 59.033 47.619 0.00 0.00 0.00 2.83
1218 1262 1.707989 TCTTCCCTGCCATACAAACCA 59.292 47.619 0.00 0.00 0.00 3.67
1219 1263 2.507407 TCTTCCCTGCCATACAAACC 57.493 50.000 0.00 0.00 0.00 3.27
1590 1658 4.667668 CGCTGAGCTAATTGAACTTGTGAC 60.668 45.833 1.78 0.00 0.00 3.67
1594 1662 2.778659 GCGCTGAGCTAATTGAACTTG 58.221 47.619 1.78 0.00 44.04 3.16
1596 1664 6.706853 CAATAGGCGCTGAGCTAATTGAACT 61.707 44.000 18.56 3.54 43.76 3.01
1597 1665 4.553547 CAATAGGCGCTGAGCTAATTGAAC 60.554 45.833 18.56 0.00 43.76 3.18
1598 1666 3.561310 CAATAGGCGCTGAGCTAATTGAA 59.439 43.478 18.56 0.00 43.76 2.69
1599 1667 3.133691 CAATAGGCGCTGAGCTAATTGA 58.866 45.455 18.56 0.00 43.76 2.57
1639 1708 0.694771 TGATGGCTCTGAAACTGGCT 59.305 50.000 0.00 0.00 0.00 4.75
1665 1734 3.156511 TGTTTCTAGCTCTGCGATCTG 57.843 47.619 0.00 0.00 0.00 2.90
1683 1752 2.094675 GGTGCCATGCTGAGTAAATGT 58.905 47.619 0.00 0.00 0.00 2.71
1717 1786 4.082733 GGTAGGCTCAAGAACATCCAAAAC 60.083 45.833 0.00 0.00 0.00 2.43
1775 1845 0.894835 TGTGCAGATAACTCTCGCCA 59.105 50.000 0.00 0.00 0.00 5.69
2095 2175 3.753434 CAGCTCCAGCCGACGAGT 61.753 66.667 0.00 0.00 43.38 4.18
2265 2345 1.582502 GTTACAGTAGATGCACGACGC 59.417 52.381 0.00 0.00 42.89 5.19
2267 2347 7.096558 GCTAATTAGTTACAGTAGATGCACGAC 60.097 40.741 13.91 0.00 0.00 4.34
2268 2348 6.916387 GCTAATTAGTTACAGTAGATGCACGA 59.084 38.462 13.91 0.00 0.00 4.35
2269 2349 6.695713 TGCTAATTAGTTACAGTAGATGCACG 59.304 38.462 13.91 0.00 0.00 5.34
2270 2350 7.042658 GGTGCTAATTAGTTACAGTAGATGCAC 60.043 40.741 13.91 10.74 42.25 4.57
2278 2358 5.160607 TGCAGGTGCTAATTAGTTACAGT 57.839 39.130 13.91 3.25 42.66 3.55
2307 2387 9.440773 AATATGTACTGCATCCAACATAGTATG 57.559 33.333 8.66 8.66 38.00 2.39
2309 2389 9.923143 GTAATATGTACTGCATCCAACATAGTA 57.077 33.333 12.91 11.95 38.00 1.82
2310 2390 7.598869 CGTAATATGTACTGCATCCAACATAGT 59.401 37.037 12.91 12.63 38.00 2.12
2311 2391 7.063426 CCGTAATATGTACTGCATCCAACATAG 59.937 40.741 12.91 3.94 38.00 2.23
2312 2392 6.871492 CCGTAATATGTACTGCATCCAACATA 59.129 38.462 10.91 10.91 38.71 2.29
2318 2398 5.107607 CGTTTCCGTAATATGTACTGCATCC 60.108 44.000 0.00 0.00 38.94 3.51
2319 2399 5.107607 CCGTTTCCGTAATATGTACTGCATC 60.108 44.000 0.00 0.00 38.94 3.91
2378 2461 6.574465 GCTCTAACAGGTTTGGAATCAGACTA 60.574 42.308 0.00 0.00 0.00 2.59
2383 2466 4.365514 TGCTCTAACAGGTTTGGAATCA 57.634 40.909 0.00 0.00 0.00 2.57
2392 2475 3.618690 GTTGGAGATGCTCTAACAGGT 57.381 47.619 15.79 0.00 46.43 4.00
2401 2484 2.437359 GCGCCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 34.95 3.79
2402 2485 3.869272 CGCGCCTGTTGGAGATGC 61.869 66.667 0.00 0.00 34.95 3.91
2403 2486 3.869272 GCGCGCCTGTTGGAGATG 61.869 66.667 23.24 0.00 34.95 2.90
2408 2491 4.999939 GTTTGGCGCGCCTGTTGG 63.000 66.667 45.79 0.00 36.94 3.77
2409 2492 2.513065 CTAGTTTGGCGCGCCTGTTG 62.513 60.000 45.79 27.62 36.94 3.33
2410 2493 2.281208 TAGTTTGGCGCGCCTGTT 60.281 55.556 45.79 30.66 36.94 3.16
2411 2494 2.742372 CTAGTTTGGCGCGCCTGT 60.742 61.111 45.79 30.00 36.94 4.00
2412 2495 4.166011 GCTAGTTTGGCGCGCCTG 62.166 66.667 45.79 28.60 36.94 4.85
2435 2518 2.443260 AAAACGGGGGATTTTGCGGC 62.443 55.000 0.00 0.00 0.00 6.53
2436 2519 0.889306 TAAAACGGGGGATTTTGCGG 59.111 50.000 0.00 0.00 31.79 5.69
2437 2520 2.330286 GTTAAAACGGGGGATTTTGCG 58.670 47.619 0.00 0.00 31.79 4.85
2450 2533 2.689871 CGGTTGCGCGCGTTAAAAC 61.690 57.895 32.35 26.30 0.00 2.43
2451 2534 2.425448 CGGTTGCGCGCGTTAAAA 60.425 55.556 32.35 17.50 0.00 1.52
2452 2535 4.371751 CCGGTTGCGCGCGTTAAA 62.372 61.111 32.35 20.07 0.00 1.52
2457 2540 4.279535 CTATTCCGGTTGCGCGCG 62.280 66.667 28.44 28.44 0.00 6.86
2458 2541 2.746803 AACTATTCCGGTTGCGCGC 61.747 57.895 27.26 27.26 0.00 6.86
2459 2542 1.060308 CAACTATTCCGGTTGCGCG 59.940 57.895 0.00 0.00 37.76 6.86
2463 2546 2.009774 CTGGAGCAACTATTCCGGTTG 58.990 52.381 0.00 0.00 44.60 3.77
2464 2547 1.679032 GCTGGAGCAACTATTCCGGTT 60.679 52.381 0.00 0.00 41.13 4.44
2465 2548 0.107654 GCTGGAGCAACTATTCCGGT 60.108 55.000 0.00 0.00 41.13 5.28
2466 2549 1.154205 CGCTGGAGCAACTATTCCGG 61.154 60.000 0.00 0.00 41.82 5.14
2467 2550 1.154205 CCGCTGGAGCAACTATTCCG 61.154 60.000 0.00 0.00 42.21 4.30
2468 2551 0.815615 CCCGCTGGAGCAACTATTCC 60.816 60.000 0.00 0.00 42.21 3.01
2469 2552 1.440145 GCCCGCTGGAGCAACTATTC 61.440 60.000 0.00 0.00 42.21 1.75
2470 2553 1.452108 GCCCGCTGGAGCAACTATT 60.452 57.895 0.00 0.00 42.21 1.73
2471 2554 2.190578 GCCCGCTGGAGCAACTAT 59.809 61.111 0.00 0.00 42.21 2.12
2472 2555 4.451150 CGCCCGCTGGAGCAACTA 62.451 66.667 0.00 0.00 42.21 2.24
2492 2575 2.819902 TATGCCGCGCGTTGTTTTCG 62.820 55.000 29.95 11.72 0.00 3.46
2493 2576 1.154376 TATGCCGCGCGTTGTTTTC 60.154 52.632 29.95 8.66 0.00 2.29
2494 2577 1.441349 GTATGCCGCGCGTTGTTTT 60.441 52.632 29.95 9.46 0.00 2.43
2495 2578 2.174835 GTATGCCGCGCGTTGTTT 59.825 55.556 29.95 10.93 0.00 2.83
2496 2579 4.142047 CGTATGCCGCGCGTTGTT 62.142 61.111 29.95 12.79 0.00 2.83
2497 2580 3.967833 TACGTATGCCGCGCGTTGT 62.968 57.895 29.95 18.18 41.42 3.32
2498 2581 3.192475 CTACGTATGCCGCGCGTTG 62.192 63.158 29.95 15.79 41.42 4.10
2499 2582 2.952783 CTACGTATGCCGCGCGTT 60.953 61.111 29.95 15.46 41.42 4.84
2500 2583 4.183686 ACTACGTATGCCGCGCGT 62.184 61.111 29.95 13.36 41.42 6.01
2501 2584 3.384399 GACTACGTATGCCGCGCG 61.384 66.667 25.67 25.67 41.42 6.86
2502 2585 3.028590 GGACTACGTATGCCGCGC 61.029 66.667 0.00 0.00 41.42 6.86
2503 2586 1.657487 CTGGACTACGTATGCCGCG 60.657 63.158 0.00 0.00 41.42 6.46
2504 2587 1.949631 GCTGGACTACGTATGCCGC 60.950 63.158 0.00 5.51 41.42 6.53
2505 2588 0.870307 GTGCTGGACTACGTATGCCG 60.870 60.000 0.00 0.00 44.03 5.69
2506 2589 0.870307 CGTGCTGGACTACGTATGCC 60.870 60.000 0.00 1.02 35.70 4.40
2507 2590 1.480219 GCGTGCTGGACTACGTATGC 61.480 60.000 0.00 0.00 41.98 3.14
2508 2591 1.200474 CGCGTGCTGGACTACGTATG 61.200 60.000 0.00 0.00 41.98 2.39
2509 2592 1.063649 CGCGTGCTGGACTACGTAT 59.936 57.895 0.00 0.00 41.98 3.06
2510 2593 2.481919 CGCGTGCTGGACTACGTA 59.518 61.111 0.00 0.00 41.98 3.57
2511 2594 4.415332 CCGCGTGCTGGACTACGT 62.415 66.667 4.92 0.00 41.98 3.57
2526 2609 4.514569 CGATTGCGTTTCGGCCCG 62.515 66.667 0.00 0.00 33.05 6.13
2527 2610 4.829518 GCGATTGCGTTTCGGCCC 62.830 66.667 0.00 0.00 40.36 5.80
2551 2634 3.429085 GGAAGTGAACGCAGCAAATATG 58.571 45.455 0.00 0.00 0.00 1.78
2552 2635 2.095853 CGGAAGTGAACGCAGCAAATAT 59.904 45.455 0.00 0.00 0.00 1.28
2553 2636 1.463056 CGGAAGTGAACGCAGCAAATA 59.537 47.619 0.00 0.00 0.00 1.40
2554 2637 0.238289 CGGAAGTGAACGCAGCAAAT 59.762 50.000 0.00 0.00 0.00 2.32
2555 2638 1.646540 CGGAAGTGAACGCAGCAAA 59.353 52.632 0.00 0.00 0.00 3.68
2556 2639 3.329231 CGGAAGTGAACGCAGCAA 58.671 55.556 0.00 0.00 0.00 3.91
2563 2646 4.135493 GAGCGCGCGGAAGTGAAC 62.135 66.667 33.06 12.08 46.66 3.18
2578 2661 4.803426 GTGGGAGGTGCGAGCGAG 62.803 72.222 0.00 0.00 0.00 5.03
2585 2668 4.129148 GATGGGGGTGGGAGGTGC 62.129 72.222 0.00 0.00 0.00 5.01
2586 2669 3.420482 GGATGGGGGTGGGAGGTG 61.420 72.222 0.00 0.00 0.00 4.00
2587 2670 1.920395 TATGGATGGGGGTGGGAGGT 61.920 60.000 0.00 0.00 0.00 3.85
2588 2671 1.073008 TATGGATGGGGGTGGGAGG 60.073 63.158 0.00 0.00 0.00 4.30
2589 2672 1.768684 CGTATGGATGGGGGTGGGAG 61.769 65.000 0.00 0.00 0.00 4.30
2590 2673 1.768482 CGTATGGATGGGGGTGGGA 60.768 63.158 0.00 0.00 0.00 4.37
2591 2674 2.076184 ACGTATGGATGGGGGTGGG 61.076 63.158 0.00 0.00 0.00 4.61
2592 2675 1.148273 CACGTATGGATGGGGGTGG 59.852 63.158 0.00 0.00 0.00 4.61
2593 2676 0.179056 GACACGTATGGATGGGGGTG 60.179 60.000 0.00 0.00 0.00 4.61
2594 2677 1.682451 CGACACGTATGGATGGGGGT 61.682 60.000 0.00 0.00 0.00 4.95
2595 2678 1.069090 CGACACGTATGGATGGGGG 59.931 63.158 0.00 0.00 0.00 5.40
2596 2679 1.594293 GCGACACGTATGGATGGGG 60.594 63.158 0.00 0.00 0.00 4.96
2597 2680 1.949133 CGCGACACGTATGGATGGG 60.949 63.158 0.00 0.00 36.87 4.00
2598 2681 2.585869 GCGCGACACGTATGGATGG 61.586 63.158 12.10 0.00 46.11 3.51
2599 2682 2.916556 CGCGCGACACGTATGGATG 61.917 63.158 28.94 0.00 46.11 3.51
2600 2683 2.654085 CGCGCGACACGTATGGAT 60.654 61.111 28.94 0.00 46.11 3.41
2632 2715 2.202285 TAAAATGCAGCGCGCGTG 60.202 55.556 32.35 26.47 46.97 5.34
2633 2716 2.098298 CTAAAATGCAGCGCGCGT 59.902 55.556 32.35 15.53 46.97 6.01
2634 2717 3.307262 GCTAAAATGCAGCGCGCG 61.307 61.111 28.44 28.44 46.97 6.86
2639 2722 1.154035 AACCGCGCTAAAATGCAGC 60.154 52.632 5.56 0.00 35.61 5.25
2640 2723 1.405469 GCAACCGCGCTAAAATGCAG 61.405 55.000 5.56 0.00 34.10 4.41
2641 2724 1.443533 GCAACCGCGCTAAAATGCA 60.444 52.632 5.56 0.00 34.10 3.96
2642 2725 1.154035 AGCAACCGCGCTAAAATGC 60.154 52.632 5.56 9.06 45.49 3.56
2643 2726 0.798009 CCAGCAACCGCGCTAAAATG 60.798 55.000 5.56 0.00 45.49 2.32
2644 2727 0.958382 TCCAGCAACCGCGCTAAAAT 60.958 50.000 5.56 0.00 45.49 1.82
2645 2728 1.573829 CTCCAGCAACCGCGCTAAAA 61.574 55.000 5.56 0.00 45.49 1.52
2646 2729 2.031314 TCCAGCAACCGCGCTAAA 59.969 55.556 5.56 0.00 45.49 1.85
2647 2730 2.434185 CTCCAGCAACCGCGCTAA 60.434 61.111 5.56 0.00 45.49 3.09
2677 2760 4.481112 CATCTGGTTTGGCGCGGC 62.481 66.667 27.61 27.61 0.00 6.53
2678 2761 2.114670 ATCATCTGGTTTGGCGCGG 61.115 57.895 8.83 0.00 0.00 6.46
2679 2762 1.063006 CATCATCTGGTTTGGCGCG 59.937 57.895 0.00 0.00 0.00 6.86
2680 2763 1.031571 TCCATCATCTGGTTTGGCGC 61.032 55.000 0.00 0.00 46.08 6.53
2681 2764 0.734889 GTCCATCATCTGGTTTGGCG 59.265 55.000 0.00 0.00 46.08 5.69
2682 2765 0.734889 CGTCCATCATCTGGTTTGGC 59.265 55.000 0.00 0.00 46.08 4.52
2683 2766 0.734889 GCGTCCATCATCTGGTTTGG 59.265 55.000 0.00 0.00 46.08 3.28
2684 2767 1.131126 GTGCGTCCATCATCTGGTTTG 59.869 52.381 0.00 0.00 46.08 2.93
2685 2768 1.453155 GTGCGTCCATCATCTGGTTT 58.547 50.000 0.00 0.00 46.08 3.27
2686 2769 0.740868 CGTGCGTCCATCATCTGGTT 60.741 55.000 0.00 0.00 46.08 3.67
2687 2770 1.153568 CGTGCGTCCATCATCTGGT 60.154 57.895 0.00 0.00 46.08 4.00
2689 2772 0.249031 TAGCGTGCGTCCATCATCTG 60.249 55.000 0.00 0.00 0.00 2.90
2690 2773 0.676184 ATAGCGTGCGTCCATCATCT 59.324 50.000 0.00 0.00 0.00 2.90
2691 2774 2.347697 TATAGCGTGCGTCCATCATC 57.652 50.000 0.00 0.00 0.00 2.92
2692 2775 2.035961 AGTTATAGCGTGCGTCCATCAT 59.964 45.455 0.00 0.00 0.00 2.45
2693 2776 1.407618 AGTTATAGCGTGCGTCCATCA 59.592 47.619 0.00 0.00 0.00 3.07
2694 2777 1.787155 CAGTTATAGCGTGCGTCCATC 59.213 52.381 0.00 0.00 0.00 3.51
2695 2778 1.136305 ACAGTTATAGCGTGCGTCCAT 59.864 47.619 0.00 0.00 0.00 3.41
2696 2779 0.528924 ACAGTTATAGCGTGCGTCCA 59.471 50.000 0.00 0.00 0.00 4.02
2697 2780 1.636988 AACAGTTATAGCGTGCGTCC 58.363 50.000 0.00 0.00 0.00 4.79
2698 2781 3.717350 AAAACAGTTATAGCGTGCGTC 57.283 42.857 0.00 0.00 0.00 5.19
2732 2815 1.369091 ATCTCCAACATGCGCCGAAC 61.369 55.000 4.18 0.00 0.00 3.95
2733 2816 1.078497 ATCTCCAACATGCGCCGAA 60.078 52.632 4.18 0.00 0.00 4.30
2734 2817 1.815003 CATCTCCAACATGCGCCGA 60.815 57.895 4.18 0.00 0.00 5.54
2735 2818 2.711311 CATCTCCAACATGCGCCG 59.289 61.111 4.18 0.00 0.00 6.46
2736 2819 2.410469 GCATCTCCAACATGCGCC 59.590 61.111 4.18 0.00 37.51 6.53
2739 2822 1.939974 TACGAGCATCTCCAACATGC 58.060 50.000 0.00 0.00 46.05 4.06
2740 2823 2.868583 CCTTACGAGCATCTCCAACATG 59.131 50.000 0.00 0.00 0.00 3.21
2741 2824 2.158900 CCCTTACGAGCATCTCCAACAT 60.159 50.000 0.00 0.00 0.00 2.71
2742 2825 1.207089 CCCTTACGAGCATCTCCAACA 59.793 52.381 0.00 0.00 0.00 3.33
2743 2826 1.207329 ACCCTTACGAGCATCTCCAAC 59.793 52.381 0.00 0.00 0.00 3.77
2744 2827 1.568504 ACCCTTACGAGCATCTCCAA 58.431 50.000 0.00 0.00 0.00 3.53
2745 2828 2.029623 GTACCCTTACGAGCATCTCCA 58.970 52.381 0.00 0.00 0.00 3.86
2746 2829 2.308690 AGTACCCTTACGAGCATCTCC 58.691 52.381 0.00 0.00 32.93 3.71
2747 2830 3.548415 CGAAGTACCCTTACGAGCATCTC 60.548 52.174 0.00 0.00 32.93 2.75
2748 2831 2.358267 CGAAGTACCCTTACGAGCATCT 59.642 50.000 0.00 0.00 32.93 2.90
2749 2832 2.098770 ACGAAGTACCCTTACGAGCATC 59.901 50.000 0.00 0.00 41.94 3.91
2750 2833 2.097825 ACGAAGTACCCTTACGAGCAT 58.902 47.619 0.00 0.00 41.94 3.79
2751 2834 1.200716 CACGAAGTACCCTTACGAGCA 59.799 52.381 0.00 0.00 41.61 4.26
2752 2835 1.200948 ACACGAAGTACCCTTACGAGC 59.799 52.381 0.00 0.00 41.61 5.03
2753 2836 3.496155 GAACACGAAGTACCCTTACGAG 58.504 50.000 0.00 0.00 41.61 4.18
2754 2837 2.095768 CGAACACGAAGTACCCTTACGA 60.096 50.000 0.00 0.00 41.61 3.43
2755 2838 2.095768 TCGAACACGAAGTACCCTTACG 60.096 50.000 0.00 0.00 41.61 3.18
2756 2839 3.057946 ACTCGAACACGAAGTACCCTTAC 60.058 47.826 0.00 0.00 41.61 2.34
2760 2843 1.402062 GGACTCGAACACGAAGTACCC 60.402 57.143 0.00 0.00 41.61 3.69
2763 2846 1.068748 GCTGGACTCGAACACGAAGTA 60.069 52.381 0.00 0.00 41.61 2.24
2786 2869 0.179094 TCCTACTTATTGCCCGCACG 60.179 55.000 0.00 0.00 0.00 5.34
2790 2873 3.890147 AGACTACTCCTACTTATTGCCCG 59.110 47.826 0.00 0.00 0.00 6.13
2793 2876 8.949177 GGTATCTAGACTACTCCTACTTATTGC 58.051 40.741 0.00 0.00 0.00 3.56
2797 2880 8.156165 GCTTGGTATCTAGACTACTCCTACTTA 58.844 40.741 0.00 0.00 0.00 2.24
2800 2883 5.706833 GGCTTGGTATCTAGACTACTCCTAC 59.293 48.000 0.00 0.00 0.00 3.18
2802 2885 4.417518 AGGCTTGGTATCTAGACTACTCCT 59.582 45.833 0.00 3.41 32.38 3.69
2804 2887 4.453136 CGAGGCTTGGTATCTAGACTACTC 59.547 50.000 0.00 0.00 34.29 2.59
2805 2888 4.102838 TCGAGGCTTGGTATCTAGACTACT 59.897 45.833 0.97 0.00 34.29 2.57
2806 2889 4.213906 GTCGAGGCTTGGTATCTAGACTAC 59.786 50.000 0.97 0.00 34.29 2.73
2809 2892 3.215975 AGTCGAGGCTTGGTATCTAGAC 58.784 50.000 0.97 0.00 34.74 2.59
2810 2893 3.579534 AGTCGAGGCTTGGTATCTAGA 57.420 47.619 0.97 0.00 0.00 2.43
2811 2894 3.189702 GCTAGTCGAGGCTTGGTATCTAG 59.810 52.174 0.97 9.88 0.00 2.43
2812 2895 3.147629 GCTAGTCGAGGCTTGGTATCTA 58.852 50.000 0.97 0.41 0.00 1.98
2813 2896 1.957877 GCTAGTCGAGGCTTGGTATCT 59.042 52.381 0.97 0.00 0.00 1.98
2814 2897 1.335142 CGCTAGTCGAGGCTTGGTATC 60.335 57.143 0.97 0.00 41.67 2.24
2815 2898 0.669077 CGCTAGTCGAGGCTTGGTAT 59.331 55.000 0.97 0.00 41.67 2.73
2816 2899 2.001361 GCGCTAGTCGAGGCTTGGTA 62.001 60.000 0.00 0.00 41.67 3.25
2817 2900 2.885861 CGCTAGTCGAGGCTTGGT 59.114 61.111 0.97 0.00 41.67 3.67
2819 2902 2.951745 CGCGCTAGTCGAGGCTTG 60.952 66.667 5.56 0.00 41.67 4.01
2820 2903 4.856607 GCGCGCTAGTCGAGGCTT 62.857 66.667 26.67 0.00 41.67 4.35
2835 2918 3.118454 AAGACATTGCGTCCGGCG 61.118 61.111 12.98 12.98 46.69 6.46
2836 2919 2.480555 CAAGACATTGCGTCCGGC 59.519 61.111 0.00 0.00 46.69 6.13
2837 2920 1.635663 GACCAAGACATTGCGTCCGG 61.636 60.000 0.00 0.00 46.69 5.14
2838 2921 0.670546 AGACCAAGACATTGCGTCCG 60.671 55.000 0.00 0.00 46.69 4.79
2839 2922 0.798776 CAGACCAAGACATTGCGTCC 59.201 55.000 0.00 0.00 46.69 4.79
2841 2924 1.800805 CTCAGACCAAGACATTGCGT 58.199 50.000 0.00 0.00 34.91 5.24
2843 2926 1.736681 GAGCTCAGACCAAGACATTGC 59.263 52.381 9.40 0.00 34.91 3.56
2866 2985 2.438795 GAGTCGCCGAGGTCCTCT 60.439 66.667 17.00 0.00 0.00 3.69
2997 3116 2.019807 AAAGGTCTGGTCCGGTAAGA 57.980 50.000 0.00 0.00 0.00 2.10
3099 3218 9.447157 TGGATTTTTCATGTTTCTTTGTTTCTT 57.553 25.926 0.00 0.00 0.00 2.52
3100 3219 9.447157 TTGGATTTTTCATGTTTCTTTGTTTCT 57.553 25.926 0.00 0.00 0.00 2.52
3103 3222 9.393512 TCATTGGATTTTTCATGTTTCTTTGTT 57.606 25.926 0.00 0.00 0.00 2.83
3104 3223 8.961294 TCATTGGATTTTTCATGTTTCTTTGT 57.039 26.923 0.00 0.00 0.00 2.83
3108 3227 8.839343 GGTTTTCATTGGATTTTTCATGTTTCT 58.161 29.630 0.00 0.00 0.00 2.52
3109 3228 8.075574 GGGTTTTCATTGGATTTTTCATGTTTC 58.924 33.333 0.00 0.00 0.00 2.78
3110 3229 7.779326 AGGGTTTTCATTGGATTTTTCATGTTT 59.221 29.630 0.00 0.00 0.00 2.83
3111 3230 7.289310 AGGGTTTTCATTGGATTTTTCATGTT 58.711 30.769 0.00 0.00 0.00 2.71
3112 3231 6.840527 AGGGTTTTCATTGGATTTTTCATGT 58.159 32.000 0.00 0.00 0.00 3.21
3113 3232 8.845413 TTAGGGTTTTCATTGGATTTTTCATG 57.155 30.769 0.00 0.00 0.00 3.07
3121 3240 9.320295 TGTTTCTTATTAGGGTTTTCATTGGAT 57.680 29.630 0.00 0.00 0.00 3.41
3122 3241 8.713708 TGTTTCTTATTAGGGTTTTCATTGGA 57.286 30.769 0.00 0.00 0.00 3.53
3123 3242 9.942850 ATTGTTTCTTATTAGGGTTTTCATTGG 57.057 29.630 0.00 0.00 0.00 3.16
3125 3244 9.942850 CCATTGTTTCTTATTAGGGTTTTCATT 57.057 29.630 0.00 0.00 0.00 2.57
3126 3245 9.320295 TCCATTGTTTCTTATTAGGGTTTTCAT 57.680 29.630 0.00 0.00 0.00 2.57
3127 3246 8.713708 TCCATTGTTTCTTATTAGGGTTTTCA 57.286 30.769 0.00 0.00 0.00 2.69
3128 3247 9.990360 TTTCCATTGTTTCTTATTAGGGTTTTC 57.010 29.630 0.00 0.00 0.00 2.29
3129 3248 9.772973 GTTTCCATTGTTTCTTATTAGGGTTTT 57.227 29.630 0.00 0.00 0.00 2.43
3130 3249 8.372459 GGTTTCCATTGTTTCTTATTAGGGTTT 58.628 33.333 0.00 0.00 0.00 3.27
3131 3250 7.511028 TGGTTTCCATTGTTTCTTATTAGGGTT 59.489 33.333 0.00 0.00 0.00 4.11
3132 3251 7.013834 TGGTTTCCATTGTTTCTTATTAGGGT 58.986 34.615 0.00 0.00 0.00 4.34
3133 3252 7.475137 TGGTTTCCATTGTTTCTTATTAGGG 57.525 36.000 0.00 0.00 0.00 3.53
3134 3253 9.423061 CTTTGGTTTCCATTGTTTCTTATTAGG 57.577 33.333 0.00 0.00 31.53 2.69
3137 3256 9.898152 TTTCTTTGGTTTCCATTGTTTCTTATT 57.102 25.926 0.00 0.00 31.53 1.40
3138 3257 9.898152 TTTTCTTTGGTTTCCATTGTTTCTTAT 57.102 25.926 0.00 0.00 31.53 1.73
3139 3258 9.726438 TTTTTCTTTGGTTTCCATTGTTTCTTA 57.274 25.926 0.00 0.00 31.53 2.10
3140 3259 8.628630 TTTTTCTTTGGTTTCCATTGTTTCTT 57.371 26.923 0.00 0.00 31.53 2.52
3176 3295 4.181309 TGCACTTGTTTCTTCGGTTTTT 57.819 36.364 0.00 0.00 0.00 1.94
3177 3296 3.859411 TGCACTTGTTTCTTCGGTTTT 57.141 38.095 0.00 0.00 0.00 2.43
3178 3297 3.859411 TTGCACTTGTTTCTTCGGTTT 57.141 38.095 0.00 0.00 0.00 3.27
3179 3298 3.859411 TTTGCACTTGTTTCTTCGGTT 57.141 38.095 0.00 0.00 0.00 4.44
3180 3299 3.442273 TCTTTTGCACTTGTTTCTTCGGT 59.558 39.130 0.00 0.00 0.00 4.69
3181 3300 4.027572 TCTTTTGCACTTGTTTCTTCGG 57.972 40.909 0.00 0.00 0.00 4.30
3182 3301 5.743398 TCATTCTTTTGCACTTGTTTCTTCG 59.257 36.000 0.00 0.00 0.00 3.79
3183 3302 7.524294 TTCATTCTTTTGCACTTGTTTCTTC 57.476 32.000 0.00 0.00 0.00 2.87
3184 3303 7.903995 TTTCATTCTTTTGCACTTGTTTCTT 57.096 28.000 0.00 0.00 0.00 2.52
3185 3304 7.903995 TTTTCATTCTTTTGCACTTGTTTCT 57.096 28.000 0.00 0.00 0.00 2.52
3188 3307 9.382275 ACTATTTTTCATTCTTTTGCACTTGTT 57.618 25.926 0.00 0.00 0.00 2.83
3189 3308 8.819974 CACTATTTTTCATTCTTTTGCACTTGT 58.180 29.630 0.00 0.00 0.00 3.16
3190 3309 9.033481 TCACTATTTTTCATTCTTTTGCACTTG 57.967 29.630 0.00 0.00 0.00 3.16
3191 3310 9.598517 TTCACTATTTTTCATTCTTTTGCACTT 57.401 25.926 0.00 0.00 0.00 3.16
3192 3311 9.598517 TTTCACTATTTTTCATTCTTTTGCACT 57.401 25.926 0.00 0.00 0.00 4.40
3195 3314 9.650371 GGTTTTCACTATTTTTCATTCTTTTGC 57.350 29.630 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.