Multiple sequence alignment - TraesCS2A01G360800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G360800 chr2A 100.000 1458 0 0 1 1458 605116707 605115250 0.000000e+00 2693.0
1 TraesCS2A01G360800 chr2A 100.000 534 0 0 1719 2252 605114989 605114456 0.000000e+00 987.0
2 TraesCS2A01G360800 chr3A 97.070 1024 19 4 435 1458 727478060 727479072 0.000000e+00 1714.0
3 TraesCS2A01G360800 chr3A 95.349 258 11 1 1783 2039 727479207 727479464 2.080000e-110 409.0
4 TraesCS2A01G360800 chr3A 95.946 74 2 1 1719 1792 215473737 215473809 3.930000e-23 119.0
5 TraesCS2A01G360800 chr3D 94.553 1028 47 5 435 1458 597420737 597421759 0.000000e+00 1580.0
6 TraesCS2A01G360800 chr3D 84.350 754 61 18 717 1429 597546746 597547483 0.000000e+00 686.0
7 TraesCS2A01G360800 chr3D 97.222 72 1 1 1719 1789 505561874 505561945 1.090000e-23 121.0
8 TraesCS2A01G360800 chr3D 88.776 98 4 6 342 434 135750934 135751029 1.830000e-21 113.0
9 TraesCS2A01G360800 chr3D 92.857 42 3 0 393 434 371442853 371442812 6.720000e-06 62.1
10 TraesCS2A01G360800 chr3D 96.875 32 1 0 403 434 93325960 93325929 1.000000e-03 54.7
11 TraesCS2A01G360800 chr3B 92.095 1012 50 10 450 1458 804248118 804249102 0.000000e+00 1399.0
12 TraesCS2A01G360800 chr3B 99.078 434 4 0 1 434 525229278 525228845 0.000000e+00 780.0
13 TraesCS2A01G360800 chr3B 98.387 434 7 0 1 434 291299005 291298572 0.000000e+00 763.0
14 TraesCS2A01G360800 chr3B 97.941 437 9 0 1 437 24913082 24912646 0.000000e+00 758.0
15 TraesCS2A01G360800 chr3B 89.015 264 22 4 1783 2039 804249235 804249498 1.000000e-83 320.0
16 TraesCS2A01G360800 chr4A 98.420 443 7 0 1 443 735783088 735782646 0.000000e+00 780.0
17 TraesCS2A01G360800 chr4A 90.389 437 39 1 1 434 630148810 630149246 2.510000e-159 571.0
18 TraesCS2A01G360800 chr7B 98.848 434 5 0 1 434 254706855 254707288 0.000000e+00 774.0
19 TraesCS2A01G360800 chr7B 97.926 434 9 0 1 434 91246548 91246115 0.000000e+00 752.0
20 TraesCS2A01G360800 chr7B 94.595 74 3 1 1719 1792 173153374 173153446 1.830000e-21 113.0
21 TraesCS2A01G360800 chr1B 98.169 437 7 1 1 437 636745005 636744570 0.000000e+00 761.0
22 TraesCS2A01G360800 chr1B 95.890 219 9 0 2034 2252 6170706 6170924 2.750000e-94 355.0
23 TraesCS2A01G360800 chr6A 90.278 432 37 2 1 429 11654682 11654253 5.430000e-156 560.0
24 TraesCS2A01G360800 chr6A 89.352 432 41 2 1 429 11706879 11706450 2.540000e-149 538.0
25 TraesCS2A01G360800 chr6A 97.619 210 5 0 2043 2252 121678870 121679079 5.910000e-96 361.0
26 TraesCS2A01G360800 chr6A 95.434 219 10 0 2034 2252 578521316 578521534 1.280000e-92 350.0
27 TraesCS2A01G360800 chr6A 98.507 67 1 0 1719 1785 107695261 107695195 3.930000e-23 119.0
28 TraesCS2A01G360800 chr6A 94.595 74 3 1 1719 1792 613688313 613688241 1.830000e-21 113.0
29 TraesCS2A01G360800 chr1A 98.095 210 4 0 2043 2252 459175728 459175937 1.270000e-97 366.0
30 TraesCS2A01G360800 chr1A 97.619 210 5 0 2043 2252 177491979 177491770 5.910000e-96 361.0
31 TraesCS2A01G360800 chrUn 97.143 210 6 0 2043 2252 184038349 184038558 2.750000e-94 355.0
32 TraesCS2A01G360800 chrUn 97.143 210 6 0 2043 2252 195504459 195504668 2.750000e-94 355.0
33 TraesCS2A01G360800 chrUn 97.143 210 6 0 2043 2252 275150523 275150732 2.750000e-94 355.0
34 TraesCS2A01G360800 chr6D 97.143 210 6 0 2043 2252 83822024 83821815 2.750000e-94 355.0
35 TraesCS2A01G360800 chr6D 97.143 70 2 0 1719 1788 385917007 385916938 3.930000e-23 119.0
36 TraesCS2A01G360800 chr6D 100.000 29 0 0 406 434 15251785 15251813 1.000000e-03 54.7
37 TraesCS2A01G360800 chr5B 98.592 71 1 0 1719 1789 463213886 463213956 2.350000e-25 126.0
38 TraesCS2A01G360800 chr2D 93.590 78 3 2 1719 1794 412382585 412382508 5.080000e-22 115.0
39 TraesCS2A01G360800 chr2D 97.015 67 2 0 1719 1785 32020738 32020804 1.830000e-21 113.0
40 TraesCS2A01G360800 chr2D 87.500 48 4 1 403 448 542428123 542428076 1.000000e-03 54.7
41 TraesCS2A01G360800 chr7D 88.776 98 4 6 342 434 115081402 115081497 1.830000e-21 113.0
42 TraesCS2A01G360800 chr5D 97.500 40 1 0 395 434 389816901 389816940 4.010000e-08 69.4
43 TraesCS2A01G360800 chr4B 90.909 44 4 0 391 434 671793404 671793447 2.420000e-05 60.2
44 TraesCS2A01G360800 chr1D 97.143 35 1 0 400 434 414894567 414894533 2.420000e-05 60.2
45 TraesCS2A01G360800 chr1D 88.636 44 4 1 401 443 12752718 12752761 4.000000e-03 52.8
46 TraesCS2A01G360800 chr4D 92.308 39 2 1 403 440 462827726 462827764 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G360800 chr2A 605114456 605116707 2251 True 1840.0 2693 100.0000 1 2252 2 chr2A.!!$R1 2251
1 TraesCS2A01G360800 chr3A 727478060 727479464 1404 False 1061.5 1714 96.2095 435 2039 2 chr3A.!!$F2 1604
2 TraesCS2A01G360800 chr3D 597420737 597421759 1022 False 1580.0 1580 94.5530 435 1458 1 chr3D.!!$F3 1023
3 TraesCS2A01G360800 chr3D 597546746 597547483 737 False 686.0 686 84.3500 717 1429 1 chr3D.!!$F4 712
4 TraesCS2A01G360800 chr3B 804248118 804249498 1380 False 859.5 1399 90.5550 450 2039 2 chr3B.!!$F1 1589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.03601 ACTGGCGGATCTGAACCAAG 60.036 55.0 5.48 1.53 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2162 2213 0.039256 GGTTTTGCTGCGCATCTGAA 60.039 50.0 12.24 3.35 38.76 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.139029 AGCTGGAACCGACGATTTC 57.861 52.632 0.00 0.00 0.00 2.17
19 20 0.608640 AGCTGGAACCGACGATTTCT 59.391 50.000 0.00 0.00 0.00 2.52
20 21 1.002087 AGCTGGAACCGACGATTTCTT 59.998 47.619 0.00 0.00 0.00 2.52
21 22 1.804748 GCTGGAACCGACGATTTCTTT 59.195 47.619 0.00 0.00 0.00 2.52
22 23 2.225727 GCTGGAACCGACGATTTCTTTT 59.774 45.455 0.00 0.00 0.00 2.27
23 24 3.810373 CTGGAACCGACGATTTCTTTTG 58.190 45.455 0.00 0.00 0.00 2.44
24 25 2.031508 TGGAACCGACGATTTCTTTTGC 60.032 45.455 0.00 0.00 0.00 3.68
25 26 2.225727 GGAACCGACGATTTCTTTTGCT 59.774 45.455 0.00 0.00 0.00 3.91
26 27 3.434299 GGAACCGACGATTTCTTTTGCTA 59.566 43.478 0.00 0.00 0.00 3.49
27 28 4.392216 GAACCGACGATTTCTTTTGCTAC 58.608 43.478 0.00 0.00 0.00 3.58
28 29 2.740447 ACCGACGATTTCTTTTGCTACC 59.260 45.455 0.00 0.00 0.00 3.18
29 30 2.739913 CCGACGATTTCTTTTGCTACCA 59.260 45.455 0.00 0.00 0.00 3.25
30 31 3.374058 CCGACGATTTCTTTTGCTACCAT 59.626 43.478 0.00 0.00 0.00 3.55
31 32 4.494199 CCGACGATTTCTTTTGCTACCATC 60.494 45.833 0.00 0.00 0.00 3.51
32 33 4.578601 GACGATTTCTTTTGCTACCATCG 58.421 43.478 0.00 0.00 38.37 3.84
33 34 4.000988 ACGATTTCTTTTGCTACCATCGT 58.999 39.130 0.00 0.00 40.19 3.73
34 35 4.092968 ACGATTTCTTTTGCTACCATCGTC 59.907 41.667 0.00 0.00 40.86 4.20
35 36 4.578601 GATTTCTTTTGCTACCATCGTCG 58.421 43.478 0.00 0.00 0.00 5.12
36 37 2.004583 TCTTTTGCTACCATCGTCGG 57.995 50.000 0.00 0.00 0.00 4.79
37 38 1.546923 TCTTTTGCTACCATCGTCGGA 59.453 47.619 0.00 0.00 0.00 4.55
38 39 1.927174 CTTTTGCTACCATCGTCGGAG 59.073 52.381 0.00 0.00 0.00 4.63
39 40 0.459585 TTTGCTACCATCGTCGGAGC 60.460 55.000 0.00 5.46 32.83 4.70
40 41 1.600511 TTGCTACCATCGTCGGAGCA 61.601 55.000 12.27 12.27 37.40 4.26
41 42 1.141019 GCTACCATCGTCGGAGCAA 59.859 57.895 0.00 0.00 32.61 3.91
42 43 0.459585 GCTACCATCGTCGGAGCAAA 60.460 55.000 0.00 0.00 32.61 3.68
43 44 2.004583 CTACCATCGTCGGAGCAAAA 57.995 50.000 0.00 0.00 0.00 2.44
44 45 2.343101 CTACCATCGTCGGAGCAAAAA 58.657 47.619 0.00 0.00 0.00 1.94
60 61 2.607457 AAAAACGTGACATCGGCGA 58.393 47.368 13.87 13.87 34.94 5.54
61 62 1.153353 AAAAACGTGACATCGGCGAT 58.847 45.000 18.14 18.14 34.94 4.58
62 63 0.719465 AAAACGTGACATCGGCGATC 59.281 50.000 21.25 11.75 34.94 3.69
63 64 1.082117 AAACGTGACATCGGCGATCC 61.082 55.000 21.25 15.03 34.94 3.36
64 65 2.104132 CGTGACATCGGCGATCCA 59.896 61.111 21.25 17.50 0.00 3.41
65 66 1.518352 CGTGACATCGGCGATCCAA 60.518 57.895 21.25 5.06 0.00 3.53
66 67 1.482621 CGTGACATCGGCGATCCAAG 61.483 60.000 21.25 17.85 0.00 3.61
67 68 0.179111 GTGACATCGGCGATCCAAGA 60.179 55.000 21.25 0.00 0.00 3.02
68 69 0.103026 TGACATCGGCGATCCAAGAG 59.897 55.000 21.25 10.29 0.00 2.85
69 70 0.385751 GACATCGGCGATCCAAGAGA 59.614 55.000 21.25 0.00 0.00 3.10
70 71 0.387202 ACATCGGCGATCCAAGAGAG 59.613 55.000 21.25 8.73 0.00 3.20
71 72 0.319383 CATCGGCGATCCAAGAGAGG 60.319 60.000 21.25 1.16 0.00 3.69
72 73 0.757188 ATCGGCGATCCAAGAGAGGT 60.757 55.000 18.14 0.00 0.00 3.85
73 74 0.970937 TCGGCGATCCAAGAGAGGTT 60.971 55.000 4.99 0.00 0.00 3.50
74 75 0.807667 CGGCGATCCAAGAGAGGTTG 60.808 60.000 0.00 0.00 0.00 3.77
75 76 0.250513 GGCGATCCAAGAGAGGTTGT 59.749 55.000 0.00 0.00 0.00 3.32
76 77 1.480954 GGCGATCCAAGAGAGGTTGTA 59.519 52.381 0.00 0.00 0.00 2.41
77 78 2.093658 GGCGATCCAAGAGAGGTTGTAA 60.094 50.000 0.00 0.00 0.00 2.41
78 79 2.930682 GCGATCCAAGAGAGGTTGTAAC 59.069 50.000 0.00 0.00 0.00 2.50
79 80 3.179830 CGATCCAAGAGAGGTTGTAACG 58.820 50.000 0.00 0.00 0.00 3.18
80 81 3.119602 CGATCCAAGAGAGGTTGTAACGA 60.120 47.826 0.00 0.00 0.00 3.85
81 82 3.655276 TCCAAGAGAGGTTGTAACGAC 57.345 47.619 0.00 0.00 0.00 4.34
82 83 2.030540 TCCAAGAGAGGTTGTAACGACG 60.031 50.000 0.00 0.00 0.00 5.12
83 84 2.030540 CCAAGAGAGGTTGTAACGACGA 60.031 50.000 0.00 0.00 0.00 4.20
84 85 3.235195 CAAGAGAGGTTGTAACGACGAG 58.765 50.000 0.00 0.00 0.00 4.18
85 86 1.199558 AGAGAGGTTGTAACGACGAGC 59.800 52.381 0.00 0.00 37.68 5.03
86 87 0.956633 AGAGGTTGTAACGACGAGCA 59.043 50.000 0.00 0.00 39.56 4.26
87 88 1.068472 AGAGGTTGTAACGACGAGCAG 60.068 52.381 0.00 0.00 39.56 4.24
88 89 0.666577 AGGTTGTAACGACGAGCAGC 60.667 55.000 0.00 0.00 39.56 5.25
89 90 0.666577 GGTTGTAACGACGAGCAGCT 60.667 55.000 0.00 0.00 37.41 4.24
90 91 0.435008 GTTGTAACGACGAGCAGCTG 59.565 55.000 10.11 10.11 0.00 4.24
91 92 0.666274 TTGTAACGACGAGCAGCTGG 60.666 55.000 17.12 0.00 0.00 4.85
92 93 1.805945 GTAACGACGAGCAGCTGGG 60.806 63.158 17.12 0.00 0.00 4.45
93 94 2.273179 TAACGACGAGCAGCTGGGT 61.273 57.895 17.12 2.22 0.00 4.51
94 95 0.961857 TAACGACGAGCAGCTGGGTA 60.962 55.000 17.12 0.00 0.00 3.69
95 96 2.202623 CGACGAGCAGCTGGGTAC 60.203 66.667 17.12 0.00 0.00 3.34
96 97 2.701780 CGACGAGCAGCTGGGTACT 61.702 63.158 17.12 3.18 0.00 2.73
97 98 1.153745 GACGAGCAGCTGGGTACTG 60.154 63.158 17.12 2.03 38.22 2.74
102 103 2.507102 CAGCTGGGTACTGCGACG 60.507 66.667 5.57 0.00 45.14 5.12
103 104 2.675423 AGCTGGGTACTGCGACGA 60.675 61.111 0.00 0.00 45.14 4.20
104 105 2.202623 GCTGGGTACTGCGACGAG 60.203 66.667 0.00 0.00 0.00 4.18
123 124 3.668386 GGCAACGGTGAGGGAAAG 58.332 61.111 3.55 0.00 0.00 2.62
124 125 1.971695 GGCAACGGTGAGGGAAAGG 60.972 63.158 3.55 0.00 0.00 3.11
125 126 1.072505 GCAACGGTGAGGGAAAGGA 59.927 57.895 3.55 0.00 0.00 3.36
126 127 1.235281 GCAACGGTGAGGGAAAGGAC 61.235 60.000 3.55 0.00 0.00 3.85
127 128 0.949105 CAACGGTGAGGGAAAGGACG 60.949 60.000 0.00 0.00 0.00 4.79
128 129 2.434359 CGGTGAGGGAAAGGACGC 60.434 66.667 0.00 0.00 0.00 5.19
129 130 2.434359 GGTGAGGGAAAGGACGCG 60.434 66.667 3.53 3.53 0.00 6.01
130 131 2.434359 GTGAGGGAAAGGACGCGG 60.434 66.667 12.47 0.00 0.00 6.46
131 132 3.702048 TGAGGGAAAGGACGCGGG 61.702 66.667 12.47 0.00 0.00 6.13
132 133 3.703127 GAGGGAAAGGACGCGGGT 61.703 66.667 12.47 4.12 0.00 5.28
133 134 3.952628 GAGGGAAAGGACGCGGGTG 62.953 68.421 10.96 0.00 0.00 4.61
145 146 3.479269 CGGGTGCTTTCGCGTCTC 61.479 66.667 5.77 0.00 39.65 3.36
146 147 3.479269 GGGTGCTTTCGCGTCTCG 61.479 66.667 5.77 0.00 39.65 4.04
147 148 2.733593 GGTGCTTTCGCGTCTCGT 60.734 61.111 5.77 0.00 39.65 4.18
148 149 2.717809 GGTGCTTTCGCGTCTCGTC 61.718 63.158 5.77 0.00 39.65 4.20
149 150 2.799502 TGCTTTCGCGTCTCGTCG 60.800 61.111 5.77 0.00 39.65 5.12
150 151 3.533691 GCTTTCGCGTCTCGTCGG 61.534 66.667 5.77 0.00 39.67 4.79
151 152 2.175078 CTTTCGCGTCTCGTCGGA 59.825 61.111 5.77 0.00 39.67 4.55
152 153 1.863880 CTTTCGCGTCTCGTCGGAG 60.864 63.158 5.77 0.00 41.89 4.63
153 154 3.940975 TTTCGCGTCTCGTCGGAGC 62.941 63.158 5.77 0.00 40.26 4.70
156 157 4.400109 GCGTCTCGTCGGAGCACA 62.400 66.667 0.00 0.00 40.26 4.57
157 158 2.502080 CGTCTCGTCGGAGCACAC 60.502 66.667 0.00 0.00 40.26 3.82
158 159 2.643272 GTCTCGTCGGAGCACACA 59.357 61.111 0.00 0.00 40.26 3.72
159 160 1.729838 GTCTCGTCGGAGCACACAC 60.730 63.158 0.00 0.00 40.26 3.82
160 161 1.897137 TCTCGTCGGAGCACACACT 60.897 57.895 0.00 0.00 40.26 3.55
161 162 1.442857 CTCGTCGGAGCACACACTC 60.443 63.158 0.00 0.00 32.61 3.51
162 163 2.801162 CGTCGGAGCACACACTCG 60.801 66.667 0.00 0.00 37.57 4.18
163 164 2.335369 GTCGGAGCACACACTCGT 59.665 61.111 0.00 0.00 37.57 4.18
174 175 4.704833 CACTCGTGGTGGCTGGGG 62.705 72.222 3.98 0.00 41.90 4.96
184 185 4.828296 GGCTGGGGCAGGGACATG 62.828 72.222 0.00 0.00 40.87 3.21
185 186 4.052518 GCTGGGGCAGGGACATGT 62.053 66.667 0.00 0.00 38.54 3.21
186 187 2.273449 CTGGGGCAGGGACATGTC 59.727 66.667 17.91 17.91 0.00 3.06
187 188 2.531428 TGGGGCAGGGACATGTCA 60.531 61.111 26.47 1.69 0.00 3.58
188 189 2.044946 GGGGCAGGGACATGTCAC 60.045 66.667 26.47 23.89 0.00 3.67
189 190 2.606587 GGGGCAGGGACATGTCACT 61.607 63.158 25.22 25.22 45.87 3.41
193 194 2.665000 AGGGACATGTCACTGGCG 59.335 61.111 29.65 0.00 42.75 5.69
194 195 2.436646 GGGACATGTCACTGGCGG 60.437 66.667 26.47 0.00 0.00 6.13
195 196 2.662596 GGACATGTCACTGGCGGA 59.337 61.111 26.47 0.00 0.00 5.54
196 197 1.221840 GGACATGTCACTGGCGGAT 59.778 57.895 26.47 0.00 0.00 4.18
197 198 0.811616 GGACATGTCACTGGCGGATC 60.812 60.000 26.47 2.06 0.00 3.36
198 199 0.176680 GACATGTCACTGGCGGATCT 59.823 55.000 21.07 0.00 0.00 2.75
199 200 0.107993 ACATGTCACTGGCGGATCTG 60.108 55.000 0.00 0.00 0.00 2.90
200 201 0.176449 CATGTCACTGGCGGATCTGA 59.824 55.000 5.48 0.00 0.00 3.27
201 202 0.904649 ATGTCACTGGCGGATCTGAA 59.095 50.000 5.48 0.00 0.00 3.02
202 203 0.037326 TGTCACTGGCGGATCTGAAC 60.037 55.000 5.48 0.00 0.00 3.18
203 204 0.741221 GTCACTGGCGGATCTGAACC 60.741 60.000 5.48 0.00 0.00 3.62
204 205 1.191489 TCACTGGCGGATCTGAACCA 61.191 55.000 5.48 3.09 0.00 3.67
205 206 0.321564 CACTGGCGGATCTGAACCAA 60.322 55.000 5.48 0.00 0.00 3.67
206 207 0.036010 ACTGGCGGATCTGAACCAAG 60.036 55.000 5.48 1.53 0.00 3.61
207 208 0.250234 CTGGCGGATCTGAACCAAGA 59.750 55.000 5.48 0.00 0.00 3.02
208 209 0.036388 TGGCGGATCTGAACCAAGAC 60.036 55.000 5.48 0.00 0.00 3.01
209 210 1.084370 GGCGGATCTGAACCAAGACG 61.084 60.000 5.48 0.00 0.00 4.18
210 211 1.696832 GCGGATCTGAACCAAGACGC 61.697 60.000 5.48 0.00 35.44 5.19
211 212 1.413767 CGGATCTGAACCAAGACGCG 61.414 60.000 3.53 3.53 0.00 6.01
212 213 0.389948 GGATCTGAACCAAGACGCGT 60.390 55.000 13.85 13.85 0.00 6.01
213 214 0.716108 GATCTGAACCAAGACGCGTG 59.284 55.000 20.70 4.12 0.00 5.34
214 215 1.291877 ATCTGAACCAAGACGCGTGC 61.292 55.000 20.70 8.74 0.00 5.34
215 216 3.281751 CTGAACCAAGACGCGTGCG 62.282 63.158 20.70 13.39 46.03 5.34
216 217 4.719616 GAACCAAGACGCGTGCGC 62.720 66.667 20.70 8.17 44.19 6.09
232 233 3.162154 GCGGGGTAGAGGGGGAAG 61.162 72.222 0.00 0.00 0.00 3.46
233 234 2.694305 CGGGGTAGAGGGGGAAGA 59.306 66.667 0.00 0.00 0.00 2.87
234 235 1.002533 CGGGGTAGAGGGGGAAGAA 59.997 63.158 0.00 0.00 0.00 2.52
235 236 1.049289 CGGGGTAGAGGGGGAAGAAG 61.049 65.000 0.00 0.00 0.00 2.85
236 237 0.342313 GGGGTAGAGGGGGAAGAAGA 59.658 60.000 0.00 0.00 0.00 2.87
237 238 1.061268 GGGGTAGAGGGGGAAGAAGAT 60.061 57.143 0.00 0.00 0.00 2.40
238 239 2.331166 GGGTAGAGGGGGAAGAAGATC 58.669 57.143 0.00 0.00 0.00 2.75
239 240 2.360423 GGGTAGAGGGGGAAGAAGATCA 60.360 54.545 0.00 0.00 0.00 2.92
240 241 3.592865 GGTAGAGGGGGAAGAAGATCAT 58.407 50.000 0.00 0.00 0.00 2.45
241 242 3.326297 GGTAGAGGGGGAAGAAGATCATG 59.674 52.174 0.00 0.00 0.00 3.07
242 243 3.428063 AGAGGGGGAAGAAGATCATGA 57.572 47.619 0.00 0.00 0.00 3.07
243 244 3.044894 AGAGGGGGAAGAAGATCATGAC 58.955 50.000 0.00 0.00 0.00 3.06
244 245 2.774234 GAGGGGGAAGAAGATCATGACA 59.226 50.000 0.00 0.00 0.00 3.58
245 246 3.393941 GAGGGGGAAGAAGATCATGACAT 59.606 47.826 0.00 0.00 0.00 3.06
246 247 3.137913 AGGGGGAAGAAGATCATGACATG 59.862 47.826 9.28 9.28 0.00 3.21
247 248 3.484407 GGGGAAGAAGATCATGACATGG 58.516 50.000 15.37 0.00 0.00 3.66
248 249 3.484407 GGGAAGAAGATCATGACATGGG 58.516 50.000 15.37 0.00 0.00 4.00
249 250 3.484407 GGAAGAAGATCATGACATGGGG 58.516 50.000 15.37 0.00 0.00 4.96
250 251 3.484407 GAAGAAGATCATGACATGGGGG 58.516 50.000 15.37 0.00 0.00 5.40
251 252 2.780414 AGAAGATCATGACATGGGGGA 58.220 47.619 15.37 0.00 0.00 4.81
252 253 3.125656 AGAAGATCATGACATGGGGGAA 58.874 45.455 15.37 0.00 0.00 3.97
253 254 3.137913 AGAAGATCATGACATGGGGGAAG 59.862 47.826 15.37 0.00 0.00 3.46
254 255 1.779092 AGATCATGACATGGGGGAAGG 59.221 52.381 15.37 0.00 0.00 3.46
255 256 0.186873 ATCATGACATGGGGGAAGGC 59.813 55.000 15.37 0.00 0.00 4.35
256 257 1.825191 CATGACATGGGGGAAGGCG 60.825 63.158 7.60 0.00 0.00 5.52
257 258 3.060614 ATGACATGGGGGAAGGCGG 62.061 63.158 0.00 0.00 0.00 6.13
258 259 3.407967 GACATGGGGGAAGGCGGA 61.408 66.667 0.00 0.00 0.00 5.54
259 260 2.696125 ACATGGGGGAAGGCGGAT 60.696 61.111 0.00 0.00 0.00 4.18
260 261 2.113986 CATGGGGGAAGGCGGATC 59.886 66.667 0.00 0.00 0.00 3.36
261 262 3.560251 ATGGGGGAAGGCGGATCG 61.560 66.667 0.00 0.00 0.00 3.69
264 265 4.237207 GGGGAAGGCGGATCGGAC 62.237 72.222 4.16 0.19 0.00 4.79
265 266 4.587189 GGGAAGGCGGATCGGACG 62.587 72.222 4.16 0.00 0.00 4.79
266 267 4.587189 GGAAGGCGGATCGGACGG 62.587 72.222 4.16 0.00 0.00 4.79
283 284 4.891037 GCCCCTGCCTGCTGGATC 62.891 72.222 14.77 0.00 37.23 3.36
284 285 4.559063 CCCCTGCCTGCTGGATCG 62.559 72.222 14.77 0.13 37.23 3.69
285 286 4.559063 CCCTGCCTGCTGGATCGG 62.559 72.222 14.77 9.29 37.23 4.18
286 287 4.559063 CCTGCCTGCTGGATCGGG 62.559 72.222 14.77 7.25 37.23 5.14
314 315 2.571231 CCGACCGGCCCAAATTTG 59.429 61.111 11.40 11.40 0.00 2.32
323 324 3.964718 CCAAATTTGGGTTGGCGC 58.035 55.556 26.87 0.00 44.70 6.53
324 325 2.026520 CCAAATTTGGGTTGGCGCG 61.027 57.895 26.87 0.00 44.70 6.86
325 326 2.356913 AAATTTGGGTTGGCGCGC 60.357 55.556 25.94 25.94 0.00 6.86
326 327 3.874807 AAATTTGGGTTGGCGCGCC 62.875 57.895 42.35 42.35 0.00 6.53
353 354 4.761745 CGTATCACCGCTCAAACATATTG 58.238 43.478 0.00 0.00 0.00 1.90
354 355 4.270084 CGTATCACCGCTCAAACATATTGT 59.730 41.667 0.00 0.00 0.00 2.71
355 356 5.220586 CGTATCACCGCTCAAACATATTGTT 60.221 40.000 0.00 0.00 43.41 2.83
356 357 6.019398 CGTATCACCGCTCAAACATATTGTTA 60.019 38.462 0.00 0.00 40.14 2.41
357 358 6.942532 ATCACCGCTCAAACATATTGTTAT 57.057 33.333 0.00 0.00 40.14 1.89
358 359 6.117911 TCACCGCTCAAACATATTGTTATG 57.882 37.500 0.00 0.00 40.14 1.90
359 360 5.877564 TCACCGCTCAAACATATTGTTATGA 59.122 36.000 0.25 0.69 40.14 2.15
360 361 6.372937 TCACCGCTCAAACATATTGTTATGAA 59.627 34.615 0.25 0.00 40.14 2.57
361 362 7.026562 CACCGCTCAAACATATTGTTATGAAA 58.973 34.615 0.25 0.00 40.14 2.69
362 363 7.701924 CACCGCTCAAACATATTGTTATGAAAT 59.298 33.333 0.25 0.00 40.14 2.17
363 364 8.898761 ACCGCTCAAACATATTGTTATGAAATA 58.101 29.630 0.25 0.00 40.14 1.40
364 365 9.897744 CCGCTCAAACATATTGTTATGAAATAT 57.102 29.630 0.25 0.00 40.14 1.28
389 390 9.932207 ATTTGATTTATTTTGAGCAATGTCTCA 57.068 25.926 3.84 3.84 40.99 3.27
390 391 9.932207 TTTGATTTATTTTGAGCAATGTCTCAT 57.068 25.926 7.88 0.00 42.12 2.90
391 392 8.920509 TGATTTATTTTGAGCAATGTCTCATG 57.079 30.769 7.88 0.00 42.12 3.07
392 393 8.525316 TGATTTATTTTGAGCAATGTCTCATGT 58.475 29.630 7.88 2.18 42.12 3.21
393 394 8.922058 ATTTATTTTGAGCAATGTCTCATGTC 57.078 30.769 7.88 0.00 42.12 3.06
394 395 7.692460 TTATTTTGAGCAATGTCTCATGTCT 57.308 32.000 7.88 0.00 42.12 3.41
395 396 8.791327 TTATTTTGAGCAATGTCTCATGTCTA 57.209 30.769 7.88 0.00 42.12 2.59
396 397 7.692460 ATTTTGAGCAATGTCTCATGTCTAA 57.308 32.000 7.88 0.00 42.12 2.10
397 398 6.732531 TTTGAGCAATGTCTCATGTCTAAG 57.267 37.500 7.88 0.00 42.12 2.18
398 399 5.411831 TGAGCAATGTCTCATGTCTAAGT 57.588 39.130 3.84 0.00 38.11 2.24
399 400 5.414360 TGAGCAATGTCTCATGTCTAAGTC 58.586 41.667 3.84 0.00 38.11 3.01
400 401 5.186603 TGAGCAATGTCTCATGTCTAAGTCT 59.813 40.000 3.84 0.00 38.11 3.24
401 402 6.378280 TGAGCAATGTCTCATGTCTAAGTCTA 59.622 38.462 3.84 0.00 38.11 2.59
402 403 7.069208 TGAGCAATGTCTCATGTCTAAGTCTAT 59.931 37.037 3.84 0.00 38.11 1.98
403 404 7.790027 AGCAATGTCTCATGTCTAAGTCTATT 58.210 34.615 0.00 0.00 0.00 1.73
404 405 7.710044 AGCAATGTCTCATGTCTAAGTCTATTG 59.290 37.037 0.00 0.00 0.00 1.90
405 406 7.493971 GCAATGTCTCATGTCTAAGTCTATTGT 59.506 37.037 0.00 0.00 0.00 2.71
406 407 9.376075 CAATGTCTCATGTCTAAGTCTATTGTT 57.624 33.333 0.00 0.00 0.00 2.83
407 408 9.593134 AATGTCTCATGTCTAAGTCTATTGTTC 57.407 33.333 0.00 0.00 0.00 3.18
408 409 7.548097 TGTCTCATGTCTAAGTCTATTGTTCC 58.452 38.462 0.00 0.00 0.00 3.62
409 410 6.693545 GTCTCATGTCTAAGTCTATTGTTCCG 59.306 42.308 0.00 0.00 0.00 4.30
410 411 6.377429 TCTCATGTCTAAGTCTATTGTTCCGT 59.623 38.462 0.00 0.00 0.00 4.69
411 412 6.330278 TCATGTCTAAGTCTATTGTTCCGTG 58.670 40.000 0.00 0.00 0.00 4.94
412 413 5.068234 TGTCTAAGTCTATTGTTCCGTGG 57.932 43.478 0.00 0.00 0.00 4.94
413 414 3.864003 GTCTAAGTCTATTGTTCCGTGGC 59.136 47.826 0.00 0.00 0.00 5.01
414 415 2.851263 AAGTCTATTGTTCCGTGGCA 57.149 45.000 0.00 0.00 0.00 4.92
415 416 2.851263 AGTCTATTGTTCCGTGGCAA 57.149 45.000 0.00 0.00 0.00 4.52
416 417 2.423577 AGTCTATTGTTCCGTGGCAAC 58.576 47.619 0.00 0.00 0.00 4.17
428 429 4.776647 GGCAACGCACGGGCATTC 62.777 66.667 11.77 0.00 41.24 2.67
429 430 4.036804 GCAACGCACGGGCATTCA 62.037 61.111 11.77 0.00 41.24 2.57
430 431 2.176546 CAACGCACGGGCATTCAG 59.823 61.111 11.77 0.00 41.24 3.02
431 432 3.737172 AACGCACGGGCATTCAGC 61.737 61.111 11.77 0.00 41.24 4.26
432 433 4.704833 ACGCACGGGCATTCAGCT 62.705 61.111 11.77 0.00 44.79 4.24
433 434 2.511373 CGCACGGGCATTCAGCTA 60.511 61.111 11.77 0.00 44.79 3.32
441 442 4.516698 CACGGGCATTCAGCTAATTAATCT 59.483 41.667 0.00 0.00 44.79 2.40
1356 1402 5.872617 TGGTTGATTAGCTACATACACACAC 59.127 40.000 0.00 0.00 0.00 3.82
1437 1483 0.730840 CTCGCATGCATTTGAGAGCA 59.269 50.000 19.57 0.00 45.92 4.26
1819 1870 7.836479 AACGTAACTAAGCCTATAATCCTCT 57.164 36.000 0.00 0.00 0.00 3.69
1948 1999 1.283321 AGGTGGATCTTCTTCCTTGCC 59.717 52.381 0.00 0.00 36.68 4.52
1994 2045 6.238538 CGGGTTGTTATTAATCGCTGGTTATT 60.239 38.462 0.00 0.00 0.00 1.40
2039 2090 3.050619 GGATATTGCTCGTAGTCCAACG 58.949 50.000 0.00 0.00 44.19 4.10
2046 2097 2.738147 CGTAGTCCAACGAAGCTGG 58.262 57.895 0.00 0.00 46.86 4.85
2056 2107 2.295253 ACGAAGCTGGATTAAGACCG 57.705 50.000 0.00 0.00 0.00 4.79
2057 2108 0.931005 CGAAGCTGGATTAAGACCGC 59.069 55.000 0.00 0.00 0.00 5.68
2058 2109 1.300481 GAAGCTGGATTAAGACCGCC 58.700 55.000 0.00 0.00 0.00 6.13
2059 2110 0.107165 AAGCTGGATTAAGACCGCCC 60.107 55.000 0.00 0.00 0.00 6.13
2060 2111 0.983378 AGCTGGATTAAGACCGCCCT 60.983 55.000 0.00 0.00 0.00 5.19
2061 2112 0.533085 GCTGGATTAAGACCGCCCTC 60.533 60.000 0.00 0.00 0.00 4.30
2062 2113 0.830648 CTGGATTAAGACCGCCCTCA 59.169 55.000 0.00 0.00 0.00 3.86
2063 2114 0.830648 TGGATTAAGACCGCCCTCAG 59.169 55.000 0.00 0.00 0.00 3.35
2064 2115 0.106894 GGATTAAGACCGCCCTCAGG 59.893 60.000 0.00 0.00 0.00 3.86
2074 2125 2.362120 CCCTCAGGCTTGCCCTTG 60.362 66.667 8.17 1.24 43.06 3.61
2075 2126 2.362120 CCTCAGGCTTGCCCTTGG 60.362 66.667 8.17 4.21 43.06 3.61
2076 2127 2.437897 CTCAGGCTTGCCCTTGGT 59.562 61.111 8.17 0.00 43.06 3.67
2077 2128 1.975407 CTCAGGCTTGCCCTTGGTG 60.975 63.158 8.17 0.00 43.06 4.17
2078 2129 2.993264 CAGGCTTGCCCTTGGTGG 60.993 66.667 8.17 0.00 43.06 4.61
2085 2136 2.270850 GCCCTTGGTGGCGTCATA 59.729 61.111 0.00 0.00 42.54 2.15
2086 2137 1.819632 GCCCTTGGTGGCGTCATAG 60.820 63.158 0.00 0.00 42.54 2.23
2087 2138 1.819632 CCCTTGGTGGCGTCATAGC 60.820 63.158 0.00 0.00 0.00 2.97
2088 2139 1.078497 CCTTGGTGGCGTCATAGCA 60.078 57.895 0.00 0.00 39.27 3.49
2089 2140 1.091771 CCTTGGTGGCGTCATAGCAG 61.092 60.000 0.00 0.00 39.27 4.24
2090 2141 1.709147 CTTGGTGGCGTCATAGCAGC 61.709 60.000 0.00 0.00 39.27 5.25
2094 2145 2.111878 GGCGTCATAGCAGCCCAT 59.888 61.111 0.00 0.00 44.80 4.00
2095 2146 2.256591 GGCGTCATAGCAGCCCATG 61.257 63.158 0.00 0.00 44.80 3.66
2096 2147 2.256591 GCGTCATAGCAGCCCATGG 61.257 63.158 4.14 4.14 37.05 3.66
2097 2148 1.146930 CGTCATAGCAGCCCATGGT 59.853 57.895 11.73 0.00 43.56 3.55
2098 2149 0.882042 CGTCATAGCAGCCCATGGTC 60.882 60.000 11.73 0.00 40.89 4.02
2099 2150 0.471617 GTCATAGCAGCCCATGGTCT 59.528 55.000 11.73 0.00 40.89 3.85
2100 2151 0.471191 TCATAGCAGCCCATGGTCTG 59.529 55.000 18.61 18.61 40.89 3.51
2101 2152 0.471191 CATAGCAGCCCATGGTCTGA 59.529 55.000 26.62 6.81 40.89 3.27
2102 2153 1.134007 CATAGCAGCCCATGGTCTGAA 60.134 52.381 26.62 13.38 40.89 3.02
2103 2154 0.991146 TAGCAGCCCATGGTCTGAAA 59.009 50.000 26.62 10.06 40.89 2.69
2104 2155 0.610232 AGCAGCCCATGGTCTGAAAC 60.610 55.000 26.62 8.81 33.17 2.78
2116 2167 3.669251 GTCTGAAACCAGTAGACTGCT 57.331 47.619 4.03 0.00 42.47 4.24
2117 2168 3.580731 GTCTGAAACCAGTAGACTGCTC 58.419 50.000 4.03 1.78 42.47 4.26
2118 2169 3.257127 GTCTGAAACCAGTAGACTGCTCT 59.743 47.826 4.03 0.00 42.47 4.09
2119 2170 3.508012 TCTGAAACCAGTAGACTGCTCTC 59.492 47.826 4.03 1.14 42.47 3.20
2120 2171 2.229062 TGAAACCAGTAGACTGCTCTCG 59.771 50.000 4.03 0.00 42.47 4.04
2121 2172 1.912417 AACCAGTAGACTGCTCTCGT 58.088 50.000 4.03 0.00 42.47 4.18
2122 2173 1.169577 ACCAGTAGACTGCTCTCGTG 58.830 55.000 4.03 0.00 42.47 4.35
2123 2174 0.179150 CCAGTAGACTGCTCTCGTGC 60.179 60.000 4.03 0.00 42.47 5.34
2124 2175 0.522286 CAGTAGACTGCTCTCGTGCG 60.522 60.000 0.00 0.00 37.15 5.34
2125 2176 1.870016 GTAGACTGCTCTCGTGCGC 60.870 63.158 0.00 0.00 35.36 6.09
2126 2177 3.052620 TAGACTGCTCTCGTGCGCC 62.053 63.158 4.18 0.00 35.36 6.53
2127 2178 4.724602 GACTGCTCTCGTGCGCCA 62.725 66.667 4.18 0.00 35.36 5.69
2132 2183 3.753434 CTCTCGTGCGCCACCTCT 61.753 66.667 4.18 0.00 0.00 3.69
2133 2184 3.288308 CTCTCGTGCGCCACCTCTT 62.288 63.158 4.18 0.00 0.00 2.85
2134 2185 1.934220 CTCTCGTGCGCCACCTCTTA 61.934 60.000 4.18 0.00 0.00 2.10
2135 2186 1.141881 CTCGTGCGCCACCTCTTAT 59.858 57.895 4.18 0.00 0.00 1.73
2136 2187 0.384309 CTCGTGCGCCACCTCTTATA 59.616 55.000 4.18 0.00 0.00 0.98
2137 2188 1.000163 CTCGTGCGCCACCTCTTATAT 60.000 52.381 4.18 0.00 0.00 0.86
2138 2189 1.411246 TCGTGCGCCACCTCTTATATT 59.589 47.619 4.18 0.00 0.00 1.28
2139 2190 1.526887 CGTGCGCCACCTCTTATATTG 59.473 52.381 4.18 0.00 0.00 1.90
2140 2191 1.264288 GTGCGCCACCTCTTATATTGC 59.736 52.381 4.18 0.00 0.00 3.56
2141 2192 0.512952 GCGCCACCTCTTATATTGCG 59.487 55.000 0.00 0.00 43.05 4.85
2142 2193 0.512952 CGCCACCTCTTATATTGCGC 59.487 55.000 0.00 0.00 33.82 6.09
2143 2194 0.875059 GCCACCTCTTATATTGCGCC 59.125 55.000 4.18 0.00 0.00 6.53
2144 2195 1.523758 CCACCTCTTATATTGCGCCC 58.476 55.000 4.18 0.00 0.00 6.13
2145 2196 1.523758 CACCTCTTATATTGCGCCCC 58.476 55.000 4.18 0.00 0.00 5.80
2146 2197 0.400594 ACCTCTTATATTGCGCCCCC 59.599 55.000 4.18 0.00 0.00 5.40
2147 2198 0.693049 CCTCTTATATTGCGCCCCCT 59.307 55.000 4.18 0.00 0.00 4.79
2148 2199 1.073923 CCTCTTATATTGCGCCCCCTT 59.926 52.381 4.18 0.00 0.00 3.95
2149 2200 2.304761 CCTCTTATATTGCGCCCCCTTA 59.695 50.000 4.18 0.00 0.00 2.69
2150 2201 3.244770 CCTCTTATATTGCGCCCCCTTAA 60.245 47.826 4.18 0.00 0.00 1.85
2151 2202 4.394729 CTCTTATATTGCGCCCCCTTAAA 58.605 43.478 4.18 0.00 0.00 1.52
2152 2203 4.794334 TCTTATATTGCGCCCCCTTAAAA 58.206 39.130 4.18 0.00 0.00 1.52
2153 2204 4.825085 TCTTATATTGCGCCCCCTTAAAAG 59.175 41.667 4.18 0.00 0.00 2.27
2154 2205 1.107945 TATTGCGCCCCCTTAAAAGC 58.892 50.000 4.18 0.00 0.00 3.51
2155 2206 0.902516 ATTGCGCCCCCTTAAAAGCA 60.903 50.000 4.18 0.00 0.00 3.91
2156 2207 1.531739 TTGCGCCCCCTTAAAAGCAG 61.532 55.000 4.18 0.00 35.95 4.24
2157 2208 2.710902 GCGCCCCCTTAAAAGCAGG 61.711 63.158 0.00 0.00 0.00 4.85
2158 2209 2.710902 CGCCCCCTTAAAAGCAGGC 61.711 63.158 9.88 9.88 38.55 4.85
2159 2210 2.710902 GCCCCCTTAAAAGCAGGCG 61.711 63.158 5.74 0.00 34.43 5.52
2160 2211 2.052104 CCCCCTTAAAAGCAGGCGG 61.052 63.158 0.00 0.00 0.00 6.13
2161 2212 2.710902 CCCCTTAAAAGCAGGCGGC 61.711 63.158 0.00 0.00 45.30 6.53
2170 2221 3.885521 GCAGGCGGCTTCAGATGC 61.886 66.667 9.66 5.69 40.25 3.91
2171 2222 3.570638 CAGGCGGCTTCAGATGCG 61.571 66.667 9.66 0.00 0.00 4.73
2174 2225 4.233635 GCGGCTTCAGATGCGCAG 62.234 66.667 18.32 1.66 33.03 5.18
2187 2238 2.252260 CGCAGCAAAACCACTCGG 59.748 61.111 0.00 0.00 38.77 4.63
2188 2239 2.250939 CGCAGCAAAACCACTCGGA 61.251 57.895 0.00 0.00 35.59 4.55
2189 2240 1.576421 GCAGCAAAACCACTCGGAG 59.424 57.895 2.83 2.83 35.59 4.63
2190 2241 1.166531 GCAGCAAAACCACTCGGAGT 61.167 55.000 4.45 4.45 35.59 3.85
2191 2242 1.876416 GCAGCAAAACCACTCGGAGTA 60.876 52.381 10.87 0.00 35.59 2.59
2192 2243 2.489971 CAGCAAAACCACTCGGAGTAA 58.510 47.619 10.87 0.00 35.59 2.24
2193 2244 2.875933 CAGCAAAACCACTCGGAGTAAA 59.124 45.455 10.87 0.00 35.59 2.01
2194 2245 3.502211 CAGCAAAACCACTCGGAGTAAAT 59.498 43.478 10.87 0.00 35.59 1.40
2195 2246 4.023193 CAGCAAAACCACTCGGAGTAAATT 60.023 41.667 10.87 2.80 35.59 1.82
2196 2247 4.023193 AGCAAAACCACTCGGAGTAAATTG 60.023 41.667 10.87 13.70 35.59 2.32
2197 2248 4.226761 CAAAACCACTCGGAGTAAATTGC 58.773 43.478 10.87 0.00 35.59 3.56
2198 2249 2.109425 ACCACTCGGAGTAAATTGCC 57.891 50.000 10.87 0.00 35.59 4.52
2199 2250 1.628846 ACCACTCGGAGTAAATTGCCT 59.371 47.619 10.87 0.00 35.59 4.75
2200 2251 2.835764 ACCACTCGGAGTAAATTGCCTA 59.164 45.455 10.87 0.00 35.59 3.93
2201 2252 3.454812 ACCACTCGGAGTAAATTGCCTAT 59.545 43.478 10.87 0.00 35.59 2.57
2202 2253 4.652421 ACCACTCGGAGTAAATTGCCTATA 59.348 41.667 10.87 0.00 35.59 1.31
2203 2254 5.129815 ACCACTCGGAGTAAATTGCCTATAA 59.870 40.000 10.87 0.00 35.59 0.98
2204 2255 6.183361 ACCACTCGGAGTAAATTGCCTATAAT 60.183 38.462 10.87 0.00 35.59 1.28
2205 2256 6.369065 CCACTCGGAGTAAATTGCCTATAATC 59.631 42.308 10.87 0.00 0.00 1.75
2206 2257 6.929049 CACTCGGAGTAAATTGCCTATAATCA 59.071 38.462 10.87 0.00 0.00 2.57
2207 2258 7.116948 CACTCGGAGTAAATTGCCTATAATCAG 59.883 40.741 10.87 0.00 0.00 2.90
2208 2259 6.464222 TCGGAGTAAATTGCCTATAATCAGG 58.536 40.000 0.00 0.00 38.86 3.86
2209 2260 6.042781 TCGGAGTAAATTGCCTATAATCAGGT 59.957 38.462 0.00 0.00 38.05 4.00
2210 2261 6.710744 CGGAGTAAATTGCCTATAATCAGGTT 59.289 38.462 0.00 0.00 38.05 3.50
2211 2262 7.228706 CGGAGTAAATTGCCTATAATCAGGTTT 59.771 37.037 0.00 0.00 38.05 3.27
2212 2263 8.914011 GGAGTAAATTGCCTATAATCAGGTTTT 58.086 33.333 0.00 0.00 38.05 2.43
2219 2270 9.603921 ATTGCCTATAATCAGGTTTTTGAATTG 57.396 29.630 0.00 0.00 38.05 2.32
2220 2271 8.133024 TGCCTATAATCAGGTTTTTGAATTGT 57.867 30.769 0.00 0.00 38.05 2.71
2221 2272 8.592809 TGCCTATAATCAGGTTTTTGAATTGTT 58.407 29.630 0.00 0.00 38.05 2.83
2222 2273 8.872845 GCCTATAATCAGGTTTTTGAATTGTTG 58.127 33.333 0.00 0.00 38.05 3.33
2223 2274 9.369904 CCTATAATCAGGTTTTTGAATTGTTGG 57.630 33.333 0.00 0.00 0.00 3.77
2226 2277 9.844257 ATAATCAGGTTTTTGAATTGTTGGAAA 57.156 25.926 0.00 0.00 0.00 3.13
2227 2278 8.750515 AATCAGGTTTTTGAATTGTTGGAAAT 57.249 26.923 0.00 0.00 0.00 2.17
2228 2279 9.844257 AATCAGGTTTTTGAATTGTTGGAAATA 57.156 25.926 0.00 0.00 0.00 1.40
2237 2288 9.995003 TTTGAATTGTTGGAAATATAAGCAAGT 57.005 25.926 0.00 0.00 0.00 3.16
2238 2289 9.995003 TTGAATTGTTGGAAATATAAGCAAGTT 57.005 25.926 0.00 0.00 0.00 2.66
2244 2295 8.875803 TGTTGGAAATATAAGCAAGTTACTACG 58.124 33.333 0.00 0.00 0.00 3.51
2245 2296 9.090692 GTTGGAAATATAAGCAAGTTACTACGA 57.909 33.333 0.00 0.00 0.00 3.43
2246 2297 8.867112 TGGAAATATAAGCAAGTTACTACGAG 57.133 34.615 0.00 0.00 0.00 4.18
2247 2298 8.689061 TGGAAATATAAGCAAGTTACTACGAGA 58.311 33.333 0.00 0.00 0.00 4.04
2248 2299 9.694137 GGAAATATAAGCAAGTTACTACGAGAT 57.306 33.333 0.00 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.608640 AGAAATCGTCGGTTCCAGCT 59.391 50.000 0.00 0.00 0.00 4.24
1 2 1.439679 AAGAAATCGTCGGTTCCAGC 58.560 50.000 0.00 0.00 0.00 4.85
2 3 3.810373 CAAAAGAAATCGTCGGTTCCAG 58.190 45.455 0.00 0.00 0.00 3.86
3 4 2.031508 GCAAAAGAAATCGTCGGTTCCA 60.032 45.455 0.00 0.00 0.00 3.53
4 5 2.225727 AGCAAAAGAAATCGTCGGTTCC 59.774 45.455 0.00 0.00 0.00 3.62
5 6 3.537793 AGCAAAAGAAATCGTCGGTTC 57.462 42.857 0.00 0.00 0.00 3.62
6 7 3.187842 GGTAGCAAAAGAAATCGTCGGTT 59.812 43.478 0.00 0.00 0.00 4.44
7 8 2.740447 GGTAGCAAAAGAAATCGTCGGT 59.260 45.455 0.00 0.00 0.00 4.69
8 9 2.739913 TGGTAGCAAAAGAAATCGTCGG 59.260 45.455 0.00 0.00 0.00 4.79
9 10 4.578601 GATGGTAGCAAAAGAAATCGTCG 58.421 43.478 0.00 0.00 0.00 5.12
10 11 4.092968 ACGATGGTAGCAAAAGAAATCGTC 59.907 41.667 10.66 0.00 43.54 4.20
11 12 4.000988 ACGATGGTAGCAAAAGAAATCGT 58.999 39.130 10.66 10.66 42.55 3.73
12 13 4.578601 GACGATGGTAGCAAAAGAAATCG 58.421 43.478 9.55 9.55 40.79 3.34
13 14 4.494199 CCGACGATGGTAGCAAAAGAAATC 60.494 45.833 0.00 0.00 0.00 2.17
14 15 3.374058 CCGACGATGGTAGCAAAAGAAAT 59.626 43.478 0.00 0.00 0.00 2.17
15 16 2.739913 CCGACGATGGTAGCAAAAGAAA 59.260 45.455 0.00 0.00 0.00 2.52
16 17 2.028839 TCCGACGATGGTAGCAAAAGAA 60.029 45.455 0.00 0.00 0.00 2.52
17 18 1.546923 TCCGACGATGGTAGCAAAAGA 59.453 47.619 0.00 0.00 0.00 2.52
18 19 1.927174 CTCCGACGATGGTAGCAAAAG 59.073 52.381 0.00 0.00 0.00 2.27
19 20 2.004583 CTCCGACGATGGTAGCAAAA 57.995 50.000 0.00 0.00 0.00 2.44
20 21 0.459585 GCTCCGACGATGGTAGCAAA 60.460 55.000 0.00 0.00 34.40 3.68
21 22 1.141019 GCTCCGACGATGGTAGCAA 59.859 57.895 0.00 0.00 34.40 3.91
22 23 1.600511 TTGCTCCGACGATGGTAGCA 61.601 55.000 15.02 15.02 39.08 3.49
23 24 0.459585 TTTGCTCCGACGATGGTAGC 60.460 55.000 0.00 2.57 34.65 3.58
24 25 2.004583 TTTTGCTCCGACGATGGTAG 57.995 50.000 0.00 0.00 0.00 3.18
25 26 2.459060 TTTTTGCTCCGACGATGGTA 57.541 45.000 0.00 0.00 0.00 3.25
26 27 3.315765 TTTTTGCTCCGACGATGGT 57.684 47.368 0.00 0.00 0.00 3.55
42 43 1.127951 GATCGCCGATGTCACGTTTTT 59.872 47.619 3.34 0.00 0.00 1.94
43 44 0.719465 GATCGCCGATGTCACGTTTT 59.281 50.000 3.34 0.00 0.00 2.43
44 45 1.082117 GGATCGCCGATGTCACGTTT 61.082 55.000 3.34 0.00 0.00 3.60
45 46 1.518572 GGATCGCCGATGTCACGTT 60.519 57.895 3.34 0.00 0.00 3.99
46 47 2.104331 GGATCGCCGATGTCACGT 59.896 61.111 3.34 0.00 0.00 4.49
47 48 1.482621 CTTGGATCGCCGATGTCACG 61.483 60.000 3.34 0.00 36.79 4.35
48 49 0.179111 TCTTGGATCGCCGATGTCAC 60.179 55.000 3.34 0.00 36.79 3.67
49 50 0.103026 CTCTTGGATCGCCGATGTCA 59.897 55.000 3.34 0.00 36.79 3.58
50 51 0.385751 TCTCTTGGATCGCCGATGTC 59.614 55.000 3.34 0.00 36.79 3.06
51 52 0.387202 CTCTCTTGGATCGCCGATGT 59.613 55.000 3.34 0.00 36.79 3.06
52 53 0.319383 CCTCTCTTGGATCGCCGATG 60.319 60.000 3.34 0.00 36.79 3.84
53 54 0.757188 ACCTCTCTTGGATCGCCGAT 60.757 55.000 0.00 0.00 36.79 4.18
54 55 0.970937 AACCTCTCTTGGATCGCCGA 60.971 55.000 0.00 0.00 36.79 5.54
55 56 0.807667 CAACCTCTCTTGGATCGCCG 60.808 60.000 0.00 0.00 36.79 6.46
56 57 0.250513 ACAACCTCTCTTGGATCGCC 59.749 55.000 0.00 0.00 0.00 5.54
57 58 2.930682 GTTACAACCTCTCTTGGATCGC 59.069 50.000 0.00 0.00 0.00 4.58
58 59 3.119602 TCGTTACAACCTCTCTTGGATCG 60.120 47.826 0.00 0.00 31.17 3.69
59 60 4.174762 GTCGTTACAACCTCTCTTGGATC 58.825 47.826 0.00 0.00 0.00 3.36
60 61 3.367087 CGTCGTTACAACCTCTCTTGGAT 60.367 47.826 0.00 0.00 0.00 3.41
61 62 2.030540 CGTCGTTACAACCTCTCTTGGA 60.031 50.000 0.00 0.00 0.00 3.53
62 63 2.030540 TCGTCGTTACAACCTCTCTTGG 60.031 50.000 0.00 0.00 0.00 3.61
63 64 3.235195 CTCGTCGTTACAACCTCTCTTG 58.765 50.000 0.00 0.00 0.00 3.02
64 65 2.351544 GCTCGTCGTTACAACCTCTCTT 60.352 50.000 0.00 0.00 0.00 2.85
65 66 1.199558 GCTCGTCGTTACAACCTCTCT 59.800 52.381 0.00 0.00 0.00 3.10
66 67 1.068748 TGCTCGTCGTTACAACCTCTC 60.069 52.381 0.00 0.00 0.00 3.20
67 68 0.956633 TGCTCGTCGTTACAACCTCT 59.043 50.000 0.00 0.00 0.00 3.69
68 69 1.337821 CTGCTCGTCGTTACAACCTC 58.662 55.000 0.00 0.00 0.00 3.85
69 70 0.666577 GCTGCTCGTCGTTACAACCT 60.667 55.000 0.00 0.00 0.00 3.50
70 71 0.666577 AGCTGCTCGTCGTTACAACC 60.667 55.000 0.00 0.00 0.00 3.77
71 72 0.435008 CAGCTGCTCGTCGTTACAAC 59.565 55.000 0.00 0.00 0.00 3.32
72 73 0.666274 CCAGCTGCTCGTCGTTACAA 60.666 55.000 8.66 0.00 0.00 2.41
73 74 1.080772 CCAGCTGCTCGTCGTTACA 60.081 57.895 8.66 0.00 0.00 2.41
74 75 1.805945 CCCAGCTGCTCGTCGTTAC 60.806 63.158 8.66 0.00 0.00 2.50
75 76 0.961857 TACCCAGCTGCTCGTCGTTA 60.962 55.000 8.66 0.00 0.00 3.18
76 77 2.273179 TACCCAGCTGCTCGTCGTT 61.273 57.895 8.66 0.00 0.00 3.85
77 78 2.675423 TACCCAGCTGCTCGTCGT 60.675 61.111 8.66 0.00 0.00 4.34
78 79 2.202623 GTACCCAGCTGCTCGTCG 60.203 66.667 8.66 0.00 0.00 5.12
79 80 1.153745 CAGTACCCAGCTGCTCGTC 60.154 63.158 8.66 0.00 0.00 4.20
80 81 2.973899 CAGTACCCAGCTGCTCGT 59.026 61.111 8.66 6.38 0.00 4.18
85 86 2.507102 CGTCGCAGTACCCAGCTG 60.507 66.667 6.78 6.78 37.06 4.24
86 87 2.675423 TCGTCGCAGTACCCAGCT 60.675 61.111 0.00 0.00 0.00 4.24
87 88 2.202623 CTCGTCGCAGTACCCAGC 60.203 66.667 0.00 0.00 0.00 4.85
88 89 2.202623 GCTCGTCGCAGTACCCAG 60.203 66.667 0.00 0.00 38.92 4.45
89 90 4.111016 CGCTCGTCGCAGTACCCA 62.111 66.667 0.00 0.00 39.08 4.51
90 91 4.849329 CCGCTCGTCGCAGTACCC 62.849 72.222 0.00 0.00 39.08 3.69
92 93 4.771356 TGCCGCTCGTCGCAGTAC 62.771 66.667 0.00 0.00 39.08 2.73
93 94 4.045771 TTGCCGCTCGTCGCAGTA 62.046 61.111 0.00 0.00 39.08 2.74
105 106 2.281208 TTTCCCTCACCGTTGCCG 60.281 61.111 0.00 0.00 0.00 5.69
106 107 1.971695 CCTTTCCCTCACCGTTGCC 60.972 63.158 0.00 0.00 0.00 4.52
107 108 1.072505 TCCTTTCCCTCACCGTTGC 59.927 57.895 0.00 0.00 0.00 4.17
108 109 0.949105 CGTCCTTTCCCTCACCGTTG 60.949 60.000 0.00 0.00 0.00 4.10
109 110 1.370064 CGTCCTTTCCCTCACCGTT 59.630 57.895 0.00 0.00 0.00 4.44
110 111 3.057337 CGTCCTTTCCCTCACCGT 58.943 61.111 0.00 0.00 0.00 4.83
111 112 2.434359 GCGTCCTTTCCCTCACCG 60.434 66.667 0.00 0.00 0.00 4.94
112 113 2.434359 CGCGTCCTTTCCCTCACC 60.434 66.667 0.00 0.00 0.00 4.02
113 114 2.434359 CCGCGTCCTTTCCCTCAC 60.434 66.667 4.92 0.00 0.00 3.51
114 115 3.702048 CCCGCGTCCTTTCCCTCA 61.702 66.667 4.92 0.00 0.00 3.86
115 116 3.703127 ACCCGCGTCCTTTCCCTC 61.703 66.667 4.92 0.00 0.00 4.30
116 117 4.016706 CACCCGCGTCCTTTCCCT 62.017 66.667 4.92 0.00 0.00 4.20
118 119 4.699522 AGCACCCGCGTCCTTTCC 62.700 66.667 4.92 0.00 45.49 3.13
119 120 2.183858 GAAAGCACCCGCGTCCTTTC 62.184 60.000 4.92 12.82 45.49 2.62
120 121 2.203294 AAAGCACCCGCGTCCTTT 60.203 55.556 4.92 5.09 45.49 3.11
121 122 2.668550 GAAAGCACCCGCGTCCTT 60.669 61.111 4.92 0.00 45.49 3.36
134 135 1.863880 CTCCGACGAGACGCGAAAG 60.864 63.158 15.93 3.31 44.57 2.62
135 136 2.175078 CTCCGACGAGACGCGAAA 59.825 61.111 15.93 0.00 44.57 3.46
136 137 4.456253 GCTCCGACGAGACGCGAA 62.456 66.667 15.93 0.00 44.57 4.70
139 140 4.400109 TGTGCTCCGACGAGACGC 62.400 66.667 0.00 0.00 38.52 5.19
140 141 2.502080 GTGTGCTCCGACGAGACG 60.502 66.667 0.00 0.00 38.52 4.18
141 142 1.729838 GTGTGTGCTCCGACGAGAC 60.730 63.158 0.00 0.00 38.52 3.36
142 143 1.853114 GAGTGTGTGCTCCGACGAGA 61.853 60.000 0.00 0.00 38.52 4.04
143 144 1.442857 GAGTGTGTGCTCCGACGAG 60.443 63.158 0.00 0.00 39.33 4.18
144 145 2.643272 GAGTGTGTGCTCCGACGA 59.357 61.111 0.00 0.00 0.00 4.20
145 146 2.801162 CGAGTGTGTGCTCCGACG 60.801 66.667 0.00 0.00 32.11 5.12
146 147 2.016704 CACGAGTGTGTGCTCCGAC 61.017 63.158 0.00 0.00 41.34 4.79
147 148 2.335011 CACGAGTGTGTGCTCCGA 59.665 61.111 0.00 0.00 41.34 4.55
148 149 2.734723 CCACGAGTGTGTGCTCCG 60.735 66.667 2.36 0.00 44.92 4.63
149 150 1.956170 CACCACGAGTGTGTGCTCC 60.956 63.158 10.31 0.00 44.92 4.70
150 151 1.956170 CCACCACGAGTGTGTGCTC 60.956 63.158 14.87 0.00 45.74 4.26
151 152 2.108976 CCACCACGAGTGTGTGCT 59.891 61.111 14.87 0.00 45.74 4.40
152 153 3.649986 GCCACCACGAGTGTGTGC 61.650 66.667 14.87 6.05 45.74 4.57
153 154 2.108976 AGCCACCACGAGTGTGTG 59.891 61.111 13.93 13.93 45.74 3.82
154 155 2.108976 CAGCCACCACGAGTGTGT 59.891 61.111 9.00 0.00 45.74 3.72
155 156 2.666190 CCAGCCACCACGAGTGTG 60.666 66.667 9.00 3.78 45.74 3.82
156 157 3.941188 CCCAGCCACCACGAGTGT 61.941 66.667 9.00 0.00 45.74 3.55
157 158 4.704833 CCCCAGCCACCACGAGTG 62.705 72.222 0.00 0.00 46.83 3.51
167 168 4.828296 CATGTCCCTGCCCCAGCC 62.828 72.222 0.00 0.00 38.69 4.85
168 169 4.052518 ACATGTCCCTGCCCCAGC 62.053 66.667 0.00 0.00 40.48 4.85
169 170 2.273449 GACATGTCCCTGCCCCAG 59.727 66.667 15.31 0.00 0.00 4.45
170 171 2.531428 TGACATGTCCCTGCCCCA 60.531 61.111 22.85 0.00 0.00 4.96
171 172 2.044946 GTGACATGTCCCTGCCCC 60.045 66.667 22.85 0.00 0.00 5.80
172 173 1.377725 CAGTGACATGTCCCTGCCC 60.378 63.158 22.73 5.28 29.00 5.36
173 174 1.377725 CCAGTGACATGTCCCTGCC 60.378 63.158 27.20 9.82 34.41 4.85
174 175 2.042831 GCCAGTGACATGTCCCTGC 61.043 63.158 27.20 19.87 34.41 4.85
175 176 1.742880 CGCCAGTGACATGTCCCTG 60.743 63.158 26.07 26.07 35.31 4.45
176 177 2.665000 CGCCAGTGACATGTCCCT 59.335 61.111 22.85 14.43 0.00 4.20
177 178 2.257409 ATCCGCCAGTGACATGTCCC 62.257 60.000 22.85 12.07 0.00 4.46
178 179 0.811616 GATCCGCCAGTGACATGTCC 60.812 60.000 22.85 13.88 0.00 4.02
179 180 0.176680 AGATCCGCCAGTGACATGTC 59.823 55.000 19.27 19.27 0.00 3.06
180 181 0.107993 CAGATCCGCCAGTGACATGT 60.108 55.000 0.00 0.00 0.00 3.21
181 182 0.176449 TCAGATCCGCCAGTGACATG 59.824 55.000 0.00 0.00 0.00 3.21
182 183 0.904649 TTCAGATCCGCCAGTGACAT 59.095 50.000 0.00 0.00 0.00 3.06
183 184 0.037326 GTTCAGATCCGCCAGTGACA 60.037 55.000 0.00 0.00 0.00 3.58
184 185 0.741221 GGTTCAGATCCGCCAGTGAC 60.741 60.000 0.00 0.00 0.00 3.67
185 186 1.191489 TGGTTCAGATCCGCCAGTGA 61.191 55.000 0.00 0.00 0.00 3.41
186 187 0.321564 TTGGTTCAGATCCGCCAGTG 60.322 55.000 0.00 0.00 32.09 3.66
187 188 0.036010 CTTGGTTCAGATCCGCCAGT 60.036 55.000 0.00 0.00 32.09 4.00
188 189 0.250234 TCTTGGTTCAGATCCGCCAG 59.750 55.000 0.00 0.00 32.09 4.85
189 190 0.036388 GTCTTGGTTCAGATCCGCCA 60.036 55.000 0.00 0.00 0.00 5.69
190 191 1.084370 CGTCTTGGTTCAGATCCGCC 61.084 60.000 0.00 0.00 0.00 6.13
191 192 1.696832 GCGTCTTGGTTCAGATCCGC 61.697 60.000 0.00 0.00 32.98 5.54
192 193 1.413767 CGCGTCTTGGTTCAGATCCG 61.414 60.000 0.00 0.00 0.00 4.18
193 194 0.389948 ACGCGTCTTGGTTCAGATCC 60.390 55.000 5.58 0.00 0.00 3.36
194 195 0.716108 CACGCGTCTTGGTTCAGATC 59.284 55.000 9.86 0.00 0.00 2.75
195 196 1.291877 GCACGCGTCTTGGTTCAGAT 61.292 55.000 9.86 0.00 0.00 2.90
196 197 1.954146 GCACGCGTCTTGGTTCAGA 60.954 57.895 9.86 0.00 0.00 3.27
197 198 2.551270 GCACGCGTCTTGGTTCAG 59.449 61.111 9.86 0.00 0.00 3.02
198 199 3.334751 CGCACGCGTCTTGGTTCA 61.335 61.111 9.86 0.00 34.35 3.18
199 200 4.719616 GCGCACGCGTCTTGGTTC 62.720 66.667 9.86 0.00 42.09 3.62
215 216 3.162154 CTTCCCCCTCTACCCCGC 61.162 72.222 0.00 0.00 0.00 6.13
216 217 1.002533 TTCTTCCCCCTCTACCCCG 59.997 63.158 0.00 0.00 0.00 5.73
217 218 0.342313 TCTTCTTCCCCCTCTACCCC 59.658 60.000 0.00 0.00 0.00 4.95
218 219 2.331166 GATCTTCTTCCCCCTCTACCC 58.669 57.143 0.00 0.00 0.00 3.69
219 220 3.047695 TGATCTTCTTCCCCCTCTACC 57.952 52.381 0.00 0.00 0.00 3.18
220 221 4.039852 GTCATGATCTTCTTCCCCCTCTAC 59.960 50.000 0.00 0.00 0.00 2.59
221 222 4.227197 GTCATGATCTTCTTCCCCCTCTA 58.773 47.826 0.00 0.00 0.00 2.43
222 223 3.044894 GTCATGATCTTCTTCCCCCTCT 58.955 50.000 0.00 0.00 0.00 3.69
223 224 2.774234 TGTCATGATCTTCTTCCCCCTC 59.226 50.000 0.00 0.00 0.00 4.30
224 225 2.850833 TGTCATGATCTTCTTCCCCCT 58.149 47.619 0.00 0.00 0.00 4.79
225 226 3.484407 CATGTCATGATCTTCTTCCCCC 58.516 50.000 7.04 0.00 0.00 5.40
226 227 3.484407 CCATGTCATGATCTTCTTCCCC 58.516 50.000 14.67 0.00 0.00 4.81
227 228 3.484407 CCCATGTCATGATCTTCTTCCC 58.516 50.000 14.67 0.00 0.00 3.97
228 229 3.484407 CCCCATGTCATGATCTTCTTCC 58.516 50.000 14.67 0.00 0.00 3.46
229 230 3.137176 TCCCCCATGTCATGATCTTCTTC 59.863 47.826 14.67 0.00 0.00 2.87
230 231 3.125656 TCCCCCATGTCATGATCTTCTT 58.874 45.455 14.67 0.00 0.00 2.52
231 232 2.780414 TCCCCCATGTCATGATCTTCT 58.220 47.619 14.67 0.00 0.00 2.85
232 233 3.484407 CTTCCCCCATGTCATGATCTTC 58.516 50.000 14.67 0.00 0.00 2.87
233 234 2.176364 CCTTCCCCCATGTCATGATCTT 59.824 50.000 14.67 0.00 0.00 2.40
234 235 1.779092 CCTTCCCCCATGTCATGATCT 59.221 52.381 14.67 0.00 0.00 2.75
235 236 1.820877 GCCTTCCCCCATGTCATGATC 60.821 57.143 14.67 0.00 0.00 2.92
236 237 0.186873 GCCTTCCCCCATGTCATGAT 59.813 55.000 14.67 0.00 0.00 2.45
237 238 1.614711 GCCTTCCCCCATGTCATGA 59.385 57.895 14.67 0.00 0.00 3.07
238 239 1.825191 CGCCTTCCCCCATGTCATG 60.825 63.158 5.79 5.79 0.00 3.07
239 240 2.597340 CGCCTTCCCCCATGTCAT 59.403 61.111 0.00 0.00 0.00 3.06
240 241 3.727258 CCGCCTTCCCCCATGTCA 61.727 66.667 0.00 0.00 0.00 3.58
241 242 2.682582 GATCCGCCTTCCCCCATGTC 62.683 65.000 0.00 0.00 0.00 3.06
242 243 2.696125 ATCCGCCTTCCCCCATGT 60.696 61.111 0.00 0.00 0.00 3.21
243 244 2.113986 GATCCGCCTTCCCCCATG 59.886 66.667 0.00 0.00 0.00 3.66
244 245 3.560251 CGATCCGCCTTCCCCCAT 61.560 66.667 0.00 0.00 0.00 4.00
247 248 4.237207 GTCCGATCCGCCTTCCCC 62.237 72.222 0.00 0.00 0.00 4.81
248 249 4.587189 CGTCCGATCCGCCTTCCC 62.587 72.222 0.00 0.00 0.00 3.97
249 250 4.587189 CCGTCCGATCCGCCTTCC 62.587 72.222 0.00 0.00 0.00 3.46
266 267 4.891037 GATCCAGCAGGCAGGGGC 62.891 72.222 2.72 0.00 40.13 5.80
267 268 4.559063 CGATCCAGCAGGCAGGGG 62.559 72.222 2.72 0.00 33.74 4.79
268 269 4.559063 CCGATCCAGCAGGCAGGG 62.559 72.222 2.72 0.00 33.74 4.45
269 270 4.559063 CCCGATCCAGCAGGCAGG 62.559 72.222 0.00 0.00 33.74 4.85
297 298 2.571231 CAAATTTGGGCCGGTCGG 59.429 61.111 10.49 4.85 38.57 4.79
298 299 2.571231 CCAAATTTGGGCCGGTCG 59.429 61.111 26.87 1.10 44.70 4.79
307 308 2.666356 GCGCGCCAACCCAAATTTG 61.666 57.895 23.24 11.40 0.00 2.32
308 309 2.356913 GCGCGCCAACCCAAATTT 60.357 55.556 23.24 0.00 0.00 1.82
309 310 4.371590 GGCGCGCCAACCCAAATT 62.372 61.111 43.55 0.00 35.81 1.82
331 332 4.270084 ACAATATGTTTGAGCGGTGATACG 59.730 41.667 0.00 0.00 0.00 3.06
332 333 5.734855 ACAATATGTTTGAGCGGTGATAC 57.265 39.130 0.00 0.00 0.00 2.24
333 334 7.713073 TCATAACAATATGTTTGAGCGGTGATA 59.287 33.333 0.54 0.00 41.45 2.15
334 335 6.542005 TCATAACAATATGTTTGAGCGGTGAT 59.458 34.615 0.54 0.00 41.45 3.06
335 336 5.877564 TCATAACAATATGTTTGAGCGGTGA 59.122 36.000 0.54 0.00 41.45 4.02
336 337 6.117911 TCATAACAATATGTTTGAGCGGTG 57.882 37.500 0.54 0.00 41.45 4.94
337 338 6.751514 TTCATAACAATATGTTTGAGCGGT 57.248 33.333 0.54 0.00 41.45 5.68
338 339 9.897744 ATATTTCATAACAATATGTTTGAGCGG 57.102 29.630 0.54 0.00 41.45 5.52
363 364 9.932207 TGAGACATTGCTCAAAATAAATCAAAT 57.068 25.926 7.91 0.00 41.65 2.32
364 365 9.932207 ATGAGACATTGCTCAAAATAAATCAAA 57.068 25.926 12.60 0.00 46.94 2.69
365 366 9.361315 CATGAGACATTGCTCAAAATAAATCAA 57.639 29.630 12.60 0.00 46.94 2.57
366 367 8.525316 ACATGAGACATTGCTCAAAATAAATCA 58.475 29.630 0.00 0.00 46.94 2.57
367 368 8.922058 ACATGAGACATTGCTCAAAATAAATC 57.078 30.769 0.00 0.00 46.94 2.17
368 369 8.746530 AGACATGAGACATTGCTCAAAATAAAT 58.253 29.630 0.00 0.00 46.94 1.40
369 370 8.114331 AGACATGAGACATTGCTCAAAATAAA 57.886 30.769 0.00 0.00 46.94 1.40
370 371 7.692460 AGACATGAGACATTGCTCAAAATAA 57.308 32.000 0.00 0.00 46.94 1.40
371 372 8.791327 TTAGACATGAGACATTGCTCAAAATA 57.209 30.769 0.00 4.45 46.94 1.40
372 373 7.392673 ACTTAGACATGAGACATTGCTCAAAAT 59.607 33.333 0.00 4.38 46.94 1.82
373 374 6.712095 ACTTAGACATGAGACATTGCTCAAAA 59.288 34.615 0.00 4.98 46.94 2.44
374 375 6.233434 ACTTAGACATGAGACATTGCTCAAA 58.767 36.000 0.00 4.47 46.94 2.69
375 376 5.798132 ACTTAGACATGAGACATTGCTCAA 58.202 37.500 0.00 0.00 46.94 3.02
377 378 5.659463 AGACTTAGACATGAGACATTGCTC 58.341 41.667 0.00 0.00 35.46 4.26
378 379 5.674052 AGACTTAGACATGAGACATTGCT 57.326 39.130 0.00 0.00 0.00 3.91
379 380 7.493971 ACAATAGACTTAGACATGAGACATTGC 59.506 37.037 0.00 0.00 0.00 3.56
380 381 8.939201 ACAATAGACTTAGACATGAGACATTG 57.061 34.615 0.00 2.47 0.00 2.82
381 382 9.593134 GAACAATAGACTTAGACATGAGACATT 57.407 33.333 0.00 0.00 0.00 2.71
382 383 8.200792 GGAACAATAGACTTAGACATGAGACAT 58.799 37.037 0.00 0.00 0.00 3.06
383 384 7.548097 GGAACAATAGACTTAGACATGAGACA 58.452 38.462 0.00 0.00 0.00 3.41
384 385 6.693545 CGGAACAATAGACTTAGACATGAGAC 59.306 42.308 0.00 0.00 0.00 3.36
385 386 6.377429 ACGGAACAATAGACTTAGACATGAGA 59.623 38.462 0.00 0.00 0.00 3.27
386 387 6.473778 CACGGAACAATAGACTTAGACATGAG 59.526 42.308 0.00 0.00 0.00 2.90
387 388 6.330278 CACGGAACAATAGACTTAGACATGA 58.670 40.000 0.00 0.00 0.00 3.07
388 389 5.520288 CCACGGAACAATAGACTTAGACATG 59.480 44.000 0.00 0.00 0.00 3.21
389 390 5.661458 CCACGGAACAATAGACTTAGACAT 58.339 41.667 0.00 0.00 0.00 3.06
390 391 4.619863 GCCACGGAACAATAGACTTAGACA 60.620 45.833 0.00 0.00 0.00 3.41
391 392 3.864003 GCCACGGAACAATAGACTTAGAC 59.136 47.826 0.00 0.00 0.00 2.59
392 393 3.512329 TGCCACGGAACAATAGACTTAGA 59.488 43.478 0.00 0.00 0.00 2.10
393 394 3.857052 TGCCACGGAACAATAGACTTAG 58.143 45.455 0.00 0.00 0.00 2.18
394 395 3.965379 TGCCACGGAACAATAGACTTA 57.035 42.857 0.00 0.00 0.00 2.24
395 396 2.812011 GTTGCCACGGAACAATAGACTT 59.188 45.455 0.00 0.00 0.00 3.01
396 397 2.423577 GTTGCCACGGAACAATAGACT 58.576 47.619 0.00 0.00 0.00 3.24
397 398 1.127951 CGTTGCCACGGAACAATAGAC 59.872 52.381 1.68 0.00 43.16 2.59
398 399 1.434555 CGTTGCCACGGAACAATAGA 58.565 50.000 1.68 0.00 43.16 1.98
399 400 2.800053 TGCGTTGCCACGGAACAATAG 61.800 52.381 12.66 0.00 44.68 1.73
400 401 0.885150 TGCGTTGCCACGGAACAATA 60.885 50.000 12.66 0.00 44.68 1.90
401 402 2.190170 TGCGTTGCCACGGAACAAT 61.190 52.632 12.66 0.00 44.68 2.71
402 403 2.824489 TGCGTTGCCACGGAACAA 60.824 55.556 12.66 0.00 44.68 2.83
411 412 4.776647 GAATGCCCGTGCGTTGCC 62.777 66.667 0.86 0.00 46.55 4.52
412 413 3.951655 CTGAATGCCCGTGCGTTGC 62.952 63.158 0.86 0.00 46.55 4.17
413 414 2.176546 CTGAATGCCCGTGCGTTG 59.823 61.111 0.86 0.00 46.55 4.10
415 416 2.796483 TTAGCTGAATGCCCGTGCGT 62.796 55.000 0.00 0.00 44.23 5.24
416 417 1.439353 ATTAGCTGAATGCCCGTGCG 61.439 55.000 0.00 0.00 44.23 5.34
417 418 0.740737 AATTAGCTGAATGCCCGTGC 59.259 50.000 0.00 0.00 44.23 5.34
418 419 4.516698 AGATTAATTAGCTGAATGCCCGTG 59.483 41.667 0.00 0.00 44.23 4.94
419 420 4.718961 AGATTAATTAGCTGAATGCCCGT 58.281 39.130 0.00 0.00 44.23 5.28
420 421 6.801539 TTAGATTAATTAGCTGAATGCCCG 57.198 37.500 0.00 0.00 44.23 6.13
421 422 8.396272 TCTTTAGATTAATTAGCTGAATGCCC 57.604 34.615 0.00 0.00 44.23 5.36
423 424 9.752274 CGATCTTTAGATTAATTAGCTGAATGC 57.248 33.333 0.00 0.00 37.07 3.56
441 442 9.214957 AGTGACACAAAAATGATACGATCTTTA 57.785 29.630 8.59 0.00 0.00 1.85
879 888 0.782384 GCGTTGTGTGTTCGGTCTAG 59.218 55.000 0.00 0.00 0.00 2.43
881 890 1.885850 GGCGTTGTGTGTTCGGTCT 60.886 57.895 0.00 0.00 0.00 3.85
884 893 2.631428 CTGGCGTTGTGTGTTCGG 59.369 61.111 0.00 0.00 0.00 4.30
1334 1380 5.575606 ACGTGTGTGTATGTAGCTAATCAAC 59.424 40.000 0.00 0.00 0.00 3.18
1356 1402 3.804518 TTGCTTAACATACAGTGCACG 57.195 42.857 12.01 9.15 0.00 5.34
1767 1813 9.317827 ACACTTAATTACTCCCTCTGTAAACTA 57.682 33.333 0.00 0.00 34.20 2.24
1768 1814 8.203681 ACACTTAATTACTCCCTCTGTAAACT 57.796 34.615 0.00 0.00 34.20 2.66
1769 1815 9.933723 TTACACTTAATTACTCCCTCTGTAAAC 57.066 33.333 0.00 0.00 34.20 2.01
1771 1817 9.933723 GTTTACACTTAATTACTCCCTCTGTAA 57.066 33.333 0.00 0.00 34.87 2.41
1772 1818 8.246180 CGTTTACACTTAATTACTCCCTCTGTA 58.754 37.037 0.00 0.00 0.00 2.74
1773 1819 7.095270 CGTTTACACTTAATTACTCCCTCTGT 58.905 38.462 0.00 0.00 0.00 3.41
1774 1820 7.095270 ACGTTTACACTTAATTACTCCCTCTG 58.905 38.462 0.00 0.00 0.00 3.35
1775 1821 7.237209 ACGTTTACACTTAATTACTCCCTCT 57.763 36.000 0.00 0.00 0.00 3.69
1776 1822 8.864024 GTTACGTTTACACTTAATTACTCCCTC 58.136 37.037 0.00 0.00 0.00 4.30
1777 1823 8.588472 AGTTACGTTTACACTTAATTACTCCCT 58.412 33.333 0.00 0.00 0.00 4.20
1778 1824 8.763049 AGTTACGTTTACACTTAATTACTCCC 57.237 34.615 0.00 0.00 0.00 4.30
1789 1835 9.741647 GATTATAGGCTTAGTTACGTTTACACT 57.258 33.333 0.00 0.00 0.00 3.55
1948 1999 5.027737 CCGAACGATAAAACATGGACATTG 58.972 41.667 0.00 0.00 0.00 2.82
1994 2045 7.228308 TCCGCAAATTGATAATACATCACATGA 59.772 33.333 0.00 0.00 0.00 3.07
2039 2090 1.300481 GGCGGTCTTAATCCAGCTTC 58.700 55.000 0.00 0.00 0.00 3.86
2041 2092 0.983378 AGGGCGGTCTTAATCCAGCT 60.983 55.000 0.00 0.00 0.00 4.24
2042 2093 0.533085 GAGGGCGGTCTTAATCCAGC 60.533 60.000 0.00 0.00 0.00 4.85
2043 2094 0.830648 TGAGGGCGGTCTTAATCCAG 59.169 55.000 0.00 0.00 0.00 3.86
2044 2095 0.830648 CTGAGGGCGGTCTTAATCCA 59.169 55.000 0.00 0.00 0.00 3.41
2045 2096 0.106894 CCTGAGGGCGGTCTTAATCC 59.893 60.000 0.00 0.00 0.00 3.01
2046 2097 3.688553 CCTGAGGGCGGTCTTAATC 57.311 57.895 0.00 0.00 0.00 1.75
2057 2108 2.362120 CAAGGGCAAGCCTGAGGG 60.362 66.667 11.40 0.00 36.10 4.30
2058 2109 2.362120 CCAAGGGCAAGCCTGAGG 60.362 66.667 11.40 0.00 36.10 3.86
2059 2110 1.975407 CACCAAGGGCAAGCCTGAG 60.975 63.158 11.40 0.96 36.10 3.35
2060 2111 2.115910 CACCAAGGGCAAGCCTGA 59.884 61.111 11.40 0.00 36.10 3.86
2061 2112 2.993264 CCACCAAGGGCAAGCCTG 60.993 66.667 11.40 2.12 36.10 4.85
2069 2120 1.819632 GCTATGACGCCACCAAGGG 60.820 63.158 0.00 0.00 38.09 3.95
2070 2121 1.078497 TGCTATGACGCCACCAAGG 60.078 57.895 0.00 0.00 41.84 3.61
2071 2122 1.709147 GCTGCTATGACGCCACCAAG 61.709 60.000 0.00 0.00 0.00 3.61
2072 2123 1.745115 GCTGCTATGACGCCACCAA 60.745 57.895 0.00 0.00 0.00 3.67
2073 2124 2.125147 GCTGCTATGACGCCACCA 60.125 61.111 0.00 0.00 0.00 4.17
2074 2125 2.897350 GGCTGCTATGACGCCACC 60.897 66.667 0.00 0.00 43.25 4.61
2075 2126 2.897350 GGGCTGCTATGACGCCAC 60.897 66.667 0.00 0.00 45.53 5.01
2076 2127 2.745308 ATGGGCTGCTATGACGCCA 61.745 57.895 0.00 0.00 45.53 5.69
2077 2128 2.111878 ATGGGCTGCTATGACGCC 59.888 61.111 0.00 0.00 43.03 5.68
2078 2129 2.256591 CCATGGGCTGCTATGACGC 61.257 63.158 2.85 0.00 0.00 5.19
2079 2130 0.882042 GACCATGGGCTGCTATGACG 60.882 60.000 18.09 5.89 0.00 4.35
2080 2131 0.471617 AGACCATGGGCTGCTATGAC 59.528 55.000 22.86 10.52 0.00 3.06
2081 2132 0.471191 CAGACCATGGGCTGCTATGA 59.529 55.000 34.43 0.00 0.00 2.15
2082 2133 0.471191 TCAGACCATGGGCTGCTATG 59.529 55.000 38.80 19.59 30.75 2.23
2083 2134 1.216064 TTCAGACCATGGGCTGCTAT 58.784 50.000 38.80 6.59 30.75 2.97
2084 2135 0.991146 TTTCAGACCATGGGCTGCTA 59.009 50.000 38.80 26.78 30.75 3.49
2085 2136 0.610232 GTTTCAGACCATGGGCTGCT 60.610 55.000 38.80 16.70 30.75 4.24
2086 2137 1.885871 GTTTCAGACCATGGGCTGC 59.114 57.895 38.80 23.48 30.75 5.25
2104 2155 0.179150 GCACGAGAGCAGTCTACTGG 60.179 60.000 11.86 0.00 43.94 4.00
2105 2156 0.522286 CGCACGAGAGCAGTCTACTG 60.522 60.000 5.73 5.73 46.40 2.74
2106 2157 1.797441 CGCACGAGAGCAGTCTACT 59.203 57.895 0.00 0.00 30.97 2.57
2107 2158 1.870016 GCGCACGAGAGCAGTCTAC 60.870 63.158 0.30 0.00 40.58 2.59
2108 2159 2.485582 GCGCACGAGAGCAGTCTA 59.514 61.111 0.30 0.00 40.58 2.59
2109 2160 4.427661 GGCGCACGAGAGCAGTCT 62.428 66.667 10.83 0.00 42.88 3.24
2110 2161 4.724602 TGGCGCACGAGAGCAGTC 62.725 66.667 10.83 0.00 42.88 3.51
2115 2166 1.934220 TAAGAGGTGGCGCACGAGAG 61.934 60.000 10.83 0.00 34.83 3.20
2116 2167 1.320344 ATAAGAGGTGGCGCACGAGA 61.320 55.000 10.83 0.00 34.83 4.04
2117 2168 0.384309 TATAAGAGGTGGCGCACGAG 59.616 55.000 10.83 0.00 34.83 4.18
2118 2169 1.037493 ATATAAGAGGTGGCGCACGA 58.963 50.000 10.83 0.00 34.83 4.35
2119 2170 1.526887 CAATATAAGAGGTGGCGCACG 59.473 52.381 10.83 0.00 34.83 5.34
2120 2171 1.264288 GCAATATAAGAGGTGGCGCAC 59.736 52.381 10.83 5.50 0.00 5.34
2121 2172 1.593196 GCAATATAAGAGGTGGCGCA 58.407 50.000 10.83 0.00 0.00 6.09
2122 2173 0.512952 CGCAATATAAGAGGTGGCGC 59.487 55.000 0.00 0.00 36.46 6.53
2123 2174 0.512952 GCGCAATATAAGAGGTGGCG 59.487 55.000 0.30 0.00 45.15 5.69
2124 2175 0.875059 GGCGCAATATAAGAGGTGGC 59.125 55.000 10.83 0.00 0.00 5.01
2125 2176 1.523758 GGGCGCAATATAAGAGGTGG 58.476 55.000 10.83 0.00 0.00 4.61
2126 2177 1.523758 GGGGCGCAATATAAGAGGTG 58.476 55.000 10.83 0.00 0.00 4.00
2127 2178 0.400594 GGGGGCGCAATATAAGAGGT 59.599 55.000 10.83 0.00 0.00 3.85
2128 2179 0.693049 AGGGGGCGCAATATAAGAGG 59.307 55.000 10.83 0.00 0.00 3.69
2129 2180 2.568623 AAGGGGGCGCAATATAAGAG 57.431 50.000 10.83 0.00 0.00 2.85
2130 2181 4.440826 TTTAAGGGGGCGCAATATAAGA 57.559 40.909 10.83 0.00 0.00 2.10
2131 2182 4.558697 GCTTTTAAGGGGGCGCAATATAAG 60.559 45.833 10.83 6.40 0.00 1.73
2132 2183 3.319689 GCTTTTAAGGGGGCGCAATATAA 59.680 43.478 10.83 0.00 0.00 0.98
2133 2184 2.888414 GCTTTTAAGGGGGCGCAATATA 59.112 45.455 10.83 0.00 0.00 0.86
2134 2185 1.686587 GCTTTTAAGGGGGCGCAATAT 59.313 47.619 10.83 0.00 0.00 1.28
2135 2186 1.107945 GCTTTTAAGGGGGCGCAATA 58.892 50.000 10.83 0.00 0.00 1.90
2136 2187 0.902516 TGCTTTTAAGGGGGCGCAAT 60.903 50.000 10.83 0.00 0.00 3.56
2137 2188 1.531739 CTGCTTTTAAGGGGGCGCAA 61.532 55.000 10.83 0.00 0.00 4.85
2138 2189 1.976474 CTGCTTTTAAGGGGGCGCA 60.976 57.895 10.83 0.00 0.00 6.09
2139 2190 2.710902 CCTGCTTTTAAGGGGGCGC 61.711 63.158 0.00 0.00 0.00 6.53
2140 2191 2.710902 GCCTGCTTTTAAGGGGGCG 61.711 63.158 0.00 0.00 35.17 6.13
2141 2192 2.710902 CGCCTGCTTTTAAGGGGGC 61.711 63.158 0.00 0.00 42.53 5.80
2142 2193 3.603365 CGCCTGCTTTTAAGGGGG 58.397 61.111 0.00 0.00 42.53 5.40
2143 2194 2.710902 GCCGCCTGCTTTTAAGGGG 61.711 63.158 0.00 0.00 45.08 4.79
2144 2195 2.885113 GCCGCCTGCTTTTAAGGG 59.115 61.111 0.00 0.00 35.17 3.95
2153 2204 3.885521 GCATCTGAAGCCGCCTGC 61.886 66.667 0.00 0.00 41.71 4.85
2154 2205 3.570638 CGCATCTGAAGCCGCCTG 61.571 66.667 0.00 0.00 0.00 4.85
2157 2208 4.233635 CTGCGCATCTGAAGCCGC 62.234 66.667 12.24 12.34 34.04 6.53
2158 2209 4.233635 GCTGCGCATCTGAAGCCG 62.234 66.667 12.24 0.00 0.00 5.52
2159 2210 2.203972 TTTGCTGCGCATCTGAAGCC 62.204 55.000 12.24 0.00 38.76 4.35
2160 2211 0.387622 TTTTGCTGCGCATCTGAAGC 60.388 50.000 12.24 10.79 38.76 3.86
2161 2212 1.334054 GTTTTGCTGCGCATCTGAAG 58.666 50.000 12.24 0.00 38.76 3.02
2162 2213 0.039256 GGTTTTGCTGCGCATCTGAA 60.039 50.000 12.24 3.35 38.76 3.02
2163 2214 1.171549 TGGTTTTGCTGCGCATCTGA 61.172 50.000 12.24 0.00 38.76 3.27
2164 2215 1.005294 GTGGTTTTGCTGCGCATCTG 61.005 55.000 12.24 0.00 38.76 2.90
2165 2216 1.174712 AGTGGTTTTGCTGCGCATCT 61.175 50.000 12.24 0.00 38.76 2.90
2166 2217 0.730494 GAGTGGTTTTGCTGCGCATC 60.730 55.000 12.24 7.67 38.76 3.91
2167 2218 1.286880 GAGTGGTTTTGCTGCGCAT 59.713 52.632 12.24 0.00 38.76 4.73
2168 2219 2.721231 GAGTGGTTTTGCTGCGCA 59.279 55.556 10.98 10.98 36.47 6.09
2169 2220 2.427410 CGAGTGGTTTTGCTGCGC 60.427 61.111 0.00 0.00 0.00 6.09
2170 2221 2.175184 CTCCGAGTGGTTTTGCTGCG 62.175 60.000 0.00 0.00 36.30 5.18
2171 2222 1.166531 ACTCCGAGTGGTTTTGCTGC 61.167 55.000 0.00 0.00 36.30 5.25
2172 2223 2.163818 TACTCCGAGTGGTTTTGCTG 57.836 50.000 11.52 0.00 36.30 4.41
2173 2224 2.922740 TTACTCCGAGTGGTTTTGCT 57.077 45.000 11.52 0.00 36.30 3.91
2174 2225 4.226761 CAATTTACTCCGAGTGGTTTTGC 58.773 43.478 11.52 0.00 36.30 3.68
2175 2226 4.226761 GCAATTTACTCCGAGTGGTTTTG 58.773 43.478 11.52 10.14 36.30 2.44
2176 2227 3.254903 GGCAATTTACTCCGAGTGGTTTT 59.745 43.478 11.52 0.00 36.30 2.43
2177 2228 2.817844 GGCAATTTACTCCGAGTGGTTT 59.182 45.455 11.52 0.00 36.30 3.27
2178 2229 2.039879 AGGCAATTTACTCCGAGTGGTT 59.960 45.455 11.52 0.76 36.30 3.67
2179 2230 1.628846 AGGCAATTTACTCCGAGTGGT 59.371 47.619 11.52 0.00 36.30 4.16
2180 2231 2.403252 AGGCAATTTACTCCGAGTGG 57.597 50.000 11.52 0.00 0.00 4.00
2181 2232 6.929049 TGATTATAGGCAATTTACTCCGAGTG 59.071 38.462 11.52 0.00 0.00 3.51
2182 2233 7.062749 TGATTATAGGCAATTTACTCCGAGT 57.937 36.000 6.25 6.25 0.00 4.18
2183 2234 6.591834 CCTGATTATAGGCAATTTACTCCGAG 59.408 42.308 0.00 0.00 0.00 4.63
2184 2235 6.042781 ACCTGATTATAGGCAATTTACTCCGA 59.957 38.462 0.00 0.00 41.75 4.55
2185 2236 6.231211 ACCTGATTATAGGCAATTTACTCCG 58.769 40.000 0.00 0.00 41.75 4.63
2186 2237 8.465273 AAACCTGATTATAGGCAATTTACTCC 57.535 34.615 0.00 0.00 41.75 3.85
2193 2244 9.603921 CAATTCAAAAACCTGATTATAGGCAAT 57.396 29.630 0.00 0.00 41.75 3.56
2194 2245 8.592809 ACAATTCAAAAACCTGATTATAGGCAA 58.407 29.630 0.00 0.00 41.75 4.52
2195 2246 8.133024 ACAATTCAAAAACCTGATTATAGGCA 57.867 30.769 0.00 0.00 41.75 4.75
2196 2247 8.872845 CAACAATTCAAAAACCTGATTATAGGC 58.127 33.333 0.00 0.00 41.75 3.93
2197 2248 9.369904 CCAACAATTCAAAAACCTGATTATAGG 57.630 33.333 0.00 0.00 43.71 2.57
2200 2251 9.844257 TTTCCAACAATTCAAAAACCTGATTAT 57.156 25.926 0.00 0.00 0.00 1.28
2201 2252 9.844257 ATTTCCAACAATTCAAAAACCTGATTA 57.156 25.926 0.00 0.00 0.00 1.75
2202 2253 8.750515 ATTTCCAACAATTCAAAAACCTGATT 57.249 26.923 0.00 0.00 0.00 2.57
2211 2262 9.995003 ACTTGCTTATATTTCCAACAATTCAAA 57.005 25.926 0.00 0.00 0.00 2.69
2212 2263 9.995003 AACTTGCTTATATTTCCAACAATTCAA 57.005 25.926 0.00 0.00 0.00 2.69
2218 2269 8.875803 CGTAGTAACTTGCTTATATTTCCAACA 58.124 33.333 0.00 0.00 0.00 3.33
2219 2270 9.090692 TCGTAGTAACTTGCTTATATTTCCAAC 57.909 33.333 0.00 0.00 0.00 3.77
2220 2271 9.309516 CTCGTAGTAACTTGCTTATATTTCCAA 57.690 33.333 0.00 0.00 0.00 3.53
2221 2272 8.689061 TCTCGTAGTAACTTGCTTATATTTCCA 58.311 33.333 0.00 0.00 0.00 3.53
2222 2273 9.694137 ATCTCGTAGTAACTTGCTTATATTTCC 57.306 33.333 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.