Multiple sequence alignment - TraesCS2A01G349300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G349300 chr2A 100.000 3980 0 0 1 3980 588381792 588377813 0.000000e+00 7350
1 TraesCS2A01G349300 chr2A 91.318 311 25 2 3662 3972 391949953 391950261 1.320000e-114 424
2 TraesCS2A01G349300 chr2A 90.735 313 27 2 3656 3968 440948371 440948681 2.210000e-112 416
3 TraesCS2A01G349300 chr2D 94.067 2680 102 23 1000 3660 445743021 445740380 0.000000e+00 4015
4 TraesCS2A01G349300 chr2D 87.889 578 39 11 1 555 445744039 445743470 0.000000e+00 651
5 TraesCS2A01G349300 chr2D 92.880 309 21 1 3662 3970 261917956 261918263 7.850000e-122 448
6 TraesCS2A01G349300 chr2D 91.223 319 27 1 3652 3970 267301964 267302281 2.200000e-117 433
7 TraesCS2A01G349300 chr2D 91.640 311 25 1 3660 3970 238806475 238806166 2.840000e-116 429
8 TraesCS2A01G349300 chr2D 91.262 309 26 1 3662 3970 460138259 460138566 1.710000e-113 420
9 TraesCS2A01G349300 chr2D 85.934 391 36 13 617 996 445743446 445743064 2.230000e-107 399
10 TraesCS2A01G349300 chr2B 95.175 2342 78 19 1000 3313 524028696 524026362 0.000000e+00 3666
11 TraesCS2A01G349300 chr2B 86.608 1023 79 32 3 996 524029724 524028731 0.000000e+00 1077
12 TraesCS2A01G349300 chr2B 90.883 351 21 7 3315 3660 524026244 524025900 1.010000e-125 460
13 TraesCS2A01G349300 chr6D 91.909 309 24 1 3662 3970 173926788 173927095 7.900000e-117 431
14 TraesCS2A01G349300 chr1D 90.794 315 27 2 3656 3970 375521561 375521873 1.710000e-113 420
15 TraesCS2A01G349300 chr4A 90.764 314 28 1 3662 3975 354381548 354381236 6.150000e-113 418


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G349300 chr2A 588377813 588381792 3979 True 7350.000000 7350 100.000000 1 3980 1 chr2A.!!$R1 3979
1 TraesCS2A01G349300 chr2D 445740380 445744039 3659 True 1688.333333 4015 89.296667 1 3660 3 chr2D.!!$R2 3659
2 TraesCS2A01G349300 chr2B 524025900 524029724 3824 True 1734.333333 3666 90.888667 3 3660 3 chr2B.!!$R1 3657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
681 707 0.112218 CACACTGGACATTTGGGGGA 59.888 55.0 0.0 0.0 0.00 4.81 F
1963 2061 0.409876 AGGACTCTCAGCCTGTACCA 59.590 55.0 0.0 0.0 32.06 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2015 2113 0.038599 ATCCACATCCAAGCTGCACA 59.961 50.0 1.02 0.0 0.0 4.57 R
3707 3930 0.030101 GGAGGAGAGATCTTCGTGCG 59.970 60.0 0.00 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 1.578583 CCCGCCGTTACTAGGATTTG 58.421 55.000 0.00 0.00 0.00 2.32
110 111 4.821589 CTGCTCCCTTCGGTCGCC 62.822 72.222 0.00 0.00 0.00 5.54
116 117 3.839432 CCTTCGGTCGCCCCTCTC 61.839 72.222 0.00 0.00 0.00 3.20
127 128 1.740025 CGCCCCTCTCAGTTCAATTTC 59.260 52.381 0.00 0.00 0.00 2.17
130 131 2.744202 CCCCTCTCAGTTCAATTTCGTG 59.256 50.000 0.00 0.00 0.00 4.35
138 139 1.810755 GTTCAATTTCGTGGAGGACCC 59.189 52.381 0.00 0.00 34.81 4.46
164 165 2.338500 GATTCCGTCGCTGTTCTTCTT 58.662 47.619 0.00 0.00 0.00 2.52
165 166 1.779569 TTCCGTCGCTGTTCTTCTTC 58.220 50.000 0.00 0.00 0.00 2.87
179 180 3.243892 CTTCTGCTCGTCTCGCGC 61.244 66.667 0.00 0.00 41.07 6.86
216 217 2.125912 AGTGAGATGTCGGTGCGC 60.126 61.111 0.00 0.00 0.00 6.09
222 223 0.246635 AGATGTCGGTGCGCTTAGTT 59.753 50.000 9.73 0.00 0.00 2.24
263 264 1.277557 GGATGTTGAGGAGCTCTGTGT 59.722 52.381 14.64 0.00 0.00 3.72
264 265 2.289945 GGATGTTGAGGAGCTCTGTGTT 60.290 50.000 14.64 0.00 0.00 3.32
266 267 2.042464 TGTTGAGGAGCTCTGTGTTCT 58.958 47.619 14.64 0.00 0.00 3.01
309 329 7.505258 AGCCATAAACAAATTGTAGTTTTGGT 58.495 30.769 16.00 5.99 38.71 3.67
310 330 8.643324 AGCCATAAACAAATTGTAGTTTTGGTA 58.357 29.630 16.00 0.00 38.71 3.25
406 426 5.500234 TGAGCTGTAATTGGTAATCTTGCT 58.500 37.500 0.00 0.00 0.00 3.91
447 470 7.187824 TCTGGATAGATTTAGTTCTGCTGTT 57.812 36.000 0.00 0.00 0.00 3.16
448 471 7.044181 TCTGGATAGATTTAGTTCTGCTGTTG 58.956 38.462 0.00 0.00 0.00 3.33
449 472 5.586243 TGGATAGATTTAGTTCTGCTGTTGC 59.414 40.000 0.00 0.00 40.20 4.17
473 496 6.537566 CAGTACAAAATCTCAATTCTGGACG 58.462 40.000 0.00 0.00 0.00 4.79
489 513 1.347817 GACGAAGAAGTGGCGCAGAG 61.348 60.000 10.83 0.00 0.00 3.35
555 579 1.286880 CTTGTGGGCGGCTTCTTTG 59.713 57.895 9.56 0.00 0.00 2.77
556 580 1.454847 TTGTGGGCGGCTTCTTTGT 60.455 52.632 9.56 0.00 0.00 2.83
557 581 1.452145 TTGTGGGCGGCTTCTTTGTC 61.452 55.000 9.56 0.00 0.00 3.18
560 584 3.431725 GGCGGCTTCTTTGTCCCG 61.432 66.667 0.00 0.00 43.38 5.14
561 585 3.431725 GCGGCTTCTTTGTCCCGG 61.432 66.667 0.00 0.00 40.98 5.73
562 586 3.431725 CGGCTTCTTTGTCCCGGC 61.432 66.667 0.00 0.00 37.21 6.13
563 587 3.431725 GGCTTCTTTGTCCCGGCG 61.432 66.667 0.00 0.00 0.00 6.46
564 588 2.668550 GCTTCTTTGTCCCGGCGT 60.669 61.111 6.01 0.00 0.00 5.68
565 589 2.258726 GCTTCTTTGTCCCGGCGTT 61.259 57.895 6.01 0.00 0.00 4.84
566 590 1.866925 CTTCTTTGTCCCGGCGTTC 59.133 57.895 6.01 0.00 0.00 3.95
567 591 0.602905 CTTCTTTGTCCCGGCGTTCT 60.603 55.000 6.01 0.00 0.00 3.01
612 637 2.618241 GTGAAGGTGACAGATTTGCACA 59.382 45.455 11.10 0.00 34.86 4.57
672 698 1.148273 GTTCTGCCCACACTGGACA 59.852 57.895 0.00 0.00 40.96 4.02
681 707 0.112218 CACACTGGACATTTGGGGGA 59.888 55.000 0.00 0.00 0.00 4.81
690 716 3.898741 GGACATTTGGGGGACACTTTTAA 59.101 43.478 0.00 0.00 0.00 1.52
692 718 4.552674 ACATTTGGGGGACACTTTTAAGT 58.447 39.130 0.00 0.00 40.60 2.24
703 729 7.309012 GGGGACACTTTTAAGTATTTGGAAGTC 60.309 40.741 0.00 0.00 37.08 3.01
704 730 7.447545 GGGACACTTTTAAGTATTTGGAAGTCT 59.552 37.037 0.00 0.00 37.08 3.24
727 755 4.044426 CACACTTCAAAGCTTAGGTTTGC 58.956 43.478 26.21 0.00 46.44 3.68
756 784 3.382083 AGAAAGGTGTGGAAACTTGGT 57.618 42.857 0.00 0.00 0.00 3.67
766 794 4.646945 TGTGGAAACTTGGTTGCAGAATAA 59.353 37.500 0.00 0.00 28.58 1.40
769 797 5.221422 TGGAAACTTGGTTGCAGAATAAAGG 60.221 40.000 0.00 0.00 0.00 3.11
775 803 5.452078 TGGTTGCAGAATAAAGGAAGTTG 57.548 39.130 0.00 0.00 0.00 3.16
791 819 6.591001 AGGAAGTTGCATTTTGTTGGTTTAT 58.409 32.000 0.00 0.00 0.00 1.40
806 835 7.885297 TGTTGGTTTATCTTTCTCATTTGAGG 58.115 34.615 7.68 0.00 42.30 3.86
815 844 6.209774 TCTTTCTCATTTGAGGGTAGGGATA 58.790 40.000 7.68 0.00 42.30 2.59
816 845 6.851836 TCTTTCTCATTTGAGGGTAGGGATAT 59.148 38.462 7.68 0.00 42.30 1.63
818 847 7.798710 TTCTCATTTGAGGGTAGGGATATAG 57.201 40.000 7.68 0.00 42.30 1.31
819 848 6.264528 TCTCATTTGAGGGTAGGGATATAGG 58.735 44.000 7.68 0.00 42.30 2.57
844 873 2.017049 CCTTGAATAGTTTGGAGCCCG 58.983 52.381 0.00 0.00 0.00 6.13
854 883 1.275666 TTGGAGCCCGAAAGATCTCA 58.724 50.000 0.00 0.00 33.13 3.27
885 914 0.846693 AGTACATGGATGGGGCTTCC 59.153 55.000 0.00 0.00 0.00 3.46
893 924 2.110899 TGGATGGGGCTTCCTTTTTGTA 59.889 45.455 0.00 0.00 36.20 2.41
897 928 3.227614 TGGGGCTTCCTTTTTGTAGAAC 58.772 45.455 0.00 0.00 36.20 3.01
899 930 3.832490 GGGGCTTCCTTTTTGTAGAACAT 59.168 43.478 0.00 0.00 0.00 2.71
902 933 6.154534 GGGGCTTCCTTTTTGTAGAACATAAT 59.845 38.462 0.00 0.00 0.00 1.28
932 963 6.820470 TGGTTTTTCACATGATTTTCGTTC 57.180 33.333 0.00 0.00 0.00 3.95
934 965 6.475076 TGGTTTTTCACATGATTTTCGTTCTG 59.525 34.615 0.00 0.00 0.00 3.02
945 976 4.742438 TTTTCGTTCTGATGTAGCCAAC 57.258 40.909 0.00 0.00 0.00 3.77
1017 1088 0.813184 CAATGAAGGCACCATCGCTT 59.187 50.000 0.00 0.00 0.00 4.68
1149 1220 8.792633 CCTTCAAAGGTAATACTTGTTTGATCA 58.207 33.333 13.00 0.00 41.41 2.92
1177 1248 4.877773 ACATGAAACCCCAAATGGCTATA 58.122 39.130 0.00 0.00 0.00 1.31
1184 1255 7.621683 TGAAACCCCAAATGGCTATACTATTTT 59.378 33.333 0.00 0.00 37.35 1.82
1189 1260 8.264347 CCCCAAATGGCTATACTATTTTTGTTT 58.736 33.333 0.00 0.00 37.35 2.83
1190 1261 9.665719 CCCAAATGGCTATACTATTTTTGTTTT 57.334 29.630 0.00 0.00 37.35 2.43
1210 1281 1.308998 ACAAAGGGCGTTCTGAACTG 58.691 50.000 17.60 12.15 0.00 3.16
1215 1286 1.072331 AGGGCGTTCTGAACTGTTGAT 59.928 47.619 17.60 0.00 0.00 2.57
1332 1404 5.927281 AGGTGAATAGCTCATGCAAATTT 57.073 34.783 0.00 0.00 42.74 1.82
1337 1409 7.416664 GGTGAATAGCTCATGCAAATTTCCTAA 60.417 37.037 0.00 0.00 42.74 2.69
1343 1415 7.664758 AGCTCATGCAAATTTCCTAATATTCC 58.335 34.615 0.00 0.00 42.74 3.01
1345 1417 6.980593 TCATGCAAATTTCCTAATATTCCGG 58.019 36.000 0.00 0.00 0.00 5.14
1347 1419 4.892934 TGCAAATTTCCTAATATTCCGGCT 59.107 37.500 0.00 0.00 0.00 5.52
1360 1432 1.917872 TCCGGCTGGCACTAAATTTT 58.082 45.000 6.73 0.00 34.14 1.82
1370 1442 3.978855 GGCACTAAATTTTGTGTCGTTCC 59.021 43.478 26.21 17.65 36.51 3.62
1385 1457 1.517276 CGTTCCGCTAGTAATTGCTCG 59.483 52.381 0.00 0.00 0.00 5.03
1389 1461 2.426024 TCCGCTAGTAATTGCTCGAACT 59.574 45.455 0.00 0.00 0.00 3.01
1426 1498 7.493320 TGATTCTAAATTTCAATGCATGGCTTC 59.507 33.333 0.00 0.00 0.00 3.86
1429 1501 7.037438 TCTAAATTTCAATGCATGGCTTCTTC 58.963 34.615 0.00 0.00 0.00 2.87
1545 1622 9.071276 ACTACATATGCAATATTTCCTCCTTTG 57.929 33.333 1.58 0.00 37.44 2.77
1753 1838 4.833380 TCTGCTTTCTTACTAGGTGTCTGT 59.167 41.667 0.00 0.00 0.00 3.41
1839 1924 7.554211 ACTAGTGTTAGGTGCTTAGGTTATTC 58.446 38.462 0.00 0.00 0.00 1.75
1927 2025 5.593502 ACTGTCAACTATACTACCCTAGCAC 59.406 44.000 0.00 0.00 0.00 4.40
1963 2061 0.409876 AGGACTCTCAGCCTGTACCA 59.590 55.000 0.00 0.00 32.06 3.25
1964 2062 1.007721 AGGACTCTCAGCCTGTACCAT 59.992 52.381 0.00 0.00 32.06 3.55
1965 2063 1.834263 GGACTCTCAGCCTGTACCATT 59.166 52.381 0.00 0.00 0.00 3.16
2227 2329 7.010460 GGTGTATTGATTTCTTGCTTAAATGCC 59.990 37.037 0.00 0.00 0.00 4.40
2333 2435 4.154347 GAGCAGGCTCGGGACAGG 62.154 72.222 5.41 0.00 33.06 4.00
2732 2834 7.181569 TCACCTTCTCATGTGTCATATGTTA 57.818 36.000 9.16 0.00 34.14 2.41
2736 2838 7.050377 CCTTCTCATGTGTCATATGTTACCTT 58.950 38.462 9.16 0.00 0.00 3.50
2759 2861 1.068083 ATGTAGCCGATGGAGCACG 59.932 57.895 0.00 0.00 0.00 5.34
2857 2959 5.129634 TGTATGTGGCTTCAAAGAAGAACA 58.870 37.500 10.72 12.73 0.00 3.18
2870 2972 5.520376 AAGAAGAACATGGTTGGTTCAAG 57.480 39.130 7.87 0.00 45.45 3.02
2874 2976 1.178534 ACATGGTTGGTTCAAGCGGG 61.179 55.000 0.00 3.18 43.69 6.13
2995 3097 1.616374 AGTAAACCGGCAAATGTTGGG 59.384 47.619 0.00 0.00 0.00 4.12
3013 3115 3.968265 TGGGACTGAAAAAGATGATCCC 58.032 45.455 0.00 0.00 44.00 3.85
3117 3219 6.414732 TCTTTGGTGATAGGTTCAAGTATGG 58.585 40.000 0.00 0.00 35.70 2.74
3119 3221 3.118038 TGGTGATAGGTTCAAGTATGGGC 60.118 47.826 0.00 0.00 35.70 5.36
3162 3264 4.329462 TGTGTTGGCATTTTAACCCTTC 57.671 40.909 0.00 0.00 0.00 3.46
3192 3294 5.225227 TCTCCTATCTCCTAGGTGACTGTA 58.775 45.833 15.63 4.36 46.38 2.74
3193 3295 5.852807 TCTCCTATCTCCTAGGTGACTGTAT 59.147 44.000 15.63 2.66 46.38 2.29
3194 3296 6.333168 TCTCCTATCTCCTAGGTGACTGTATT 59.667 42.308 15.63 1.96 46.38 1.89
3196 3298 6.102762 TCCTATCTCCTAGGTGACTGTATTGA 59.897 42.308 15.63 3.91 46.38 2.57
3197 3299 6.432783 CCTATCTCCTAGGTGACTGTATTGAG 59.567 46.154 15.63 0.00 42.01 3.02
3198 3300 3.954904 TCTCCTAGGTGACTGTATTGAGC 59.045 47.826 9.08 0.00 43.88 4.26
3234 3336 1.683943 ATGGTGCTGGCATATCACAC 58.316 50.000 13.90 6.60 32.69 3.82
3307 3409 4.022589 TCGGTCTTACTTGAATCGTGTCTT 60.023 41.667 0.00 0.00 0.00 3.01
3313 3415 3.466836 ACTTGAATCGTGTCTTGCTGAA 58.533 40.909 0.00 0.00 0.00 3.02
3423 3642 1.408702 GGAAGCACAGCCTCAACAAAA 59.591 47.619 0.00 0.00 0.00 2.44
3463 3682 6.467677 TGCATAATTAAGCTAGGGATCTGTC 58.532 40.000 13.36 0.00 0.00 3.51
3546 3766 3.417069 TCATGTCAACAAACCCGATCT 57.583 42.857 0.00 0.00 0.00 2.75
3578 3798 9.500785 TGAATGATTTGAGTTTGTGTATCAGTA 57.499 29.630 0.00 0.00 0.00 2.74
3594 3814 9.776158 GTGTATCAGTATAGTGTATGATAGTGC 57.224 37.037 7.44 0.00 35.81 4.40
3595 3815 9.515226 TGTATCAGTATAGTGTATGATAGTGCA 57.485 33.333 7.44 0.00 35.81 4.57
3615 3835 1.153939 GTGTTGCGTGTGTTTGCCA 60.154 52.632 0.00 0.00 0.00 4.92
3625 3845 3.249799 CGTGTGTTTGCCATGAACTCTTA 59.750 43.478 0.00 0.00 0.00 2.10
3626 3846 4.083324 CGTGTGTTTGCCATGAACTCTTAT 60.083 41.667 0.00 0.00 0.00 1.73
3627 3847 5.121611 CGTGTGTTTGCCATGAACTCTTATA 59.878 40.000 0.00 0.00 0.00 0.98
3628 3848 6.183360 CGTGTGTTTGCCATGAACTCTTATAT 60.183 38.462 0.00 0.00 0.00 0.86
3629 3849 6.968904 GTGTGTTTGCCATGAACTCTTATATG 59.031 38.462 0.00 0.00 0.00 1.78
3630 3850 5.973565 GTGTTTGCCATGAACTCTTATATGC 59.026 40.000 0.00 0.00 0.00 3.14
3631 3851 5.207768 GTTTGCCATGAACTCTTATATGCG 58.792 41.667 0.00 0.00 0.00 4.73
3659 3882 8.017587 CAAAACAAATTTGGTAATACTCTGCC 57.982 34.615 21.74 0.00 43.85 4.85
3660 3883 6.909550 AACAAATTTGGTAATACTCTGCCA 57.090 33.333 21.74 0.00 0.00 4.92
3661 3884 6.515272 ACAAATTTGGTAATACTCTGCCAG 57.485 37.500 21.74 0.00 32.09 4.85
3662 3885 6.245408 ACAAATTTGGTAATACTCTGCCAGA 58.755 36.000 21.74 0.00 32.09 3.86
3663 3886 6.891908 ACAAATTTGGTAATACTCTGCCAGAT 59.108 34.615 21.74 0.00 32.09 2.90
3664 3887 7.397192 ACAAATTTGGTAATACTCTGCCAGATT 59.603 33.333 21.74 0.00 37.40 2.40
3665 3888 7.961326 AATTTGGTAATACTCTGCCAGATTT 57.039 32.000 0.00 0.00 33.72 2.17
3666 3889 7.573968 ATTTGGTAATACTCTGCCAGATTTC 57.426 36.000 0.00 0.00 32.09 2.17
3667 3890 5.692115 TGGTAATACTCTGCCAGATTTCA 57.308 39.130 0.00 0.00 0.00 2.69
3668 3891 5.674525 TGGTAATACTCTGCCAGATTTCAG 58.325 41.667 0.00 0.00 0.00 3.02
3669 3892 5.059833 GGTAATACTCTGCCAGATTTCAGG 58.940 45.833 0.00 0.00 0.00 3.86
3670 3893 4.851639 AATACTCTGCCAGATTTCAGGT 57.148 40.909 0.00 0.00 0.00 4.00
3671 3894 4.851639 ATACTCTGCCAGATTTCAGGTT 57.148 40.909 0.00 0.00 0.00 3.50
3672 3895 3.515602 ACTCTGCCAGATTTCAGGTTT 57.484 42.857 0.00 0.00 0.00 3.27
3673 3896 3.837355 ACTCTGCCAGATTTCAGGTTTT 58.163 40.909 0.00 0.00 0.00 2.43
3674 3897 3.571401 ACTCTGCCAGATTTCAGGTTTTG 59.429 43.478 0.00 0.00 0.00 2.44
3675 3898 2.892852 TCTGCCAGATTTCAGGTTTTGG 59.107 45.455 0.00 0.00 0.00 3.28
3676 3899 2.084610 GCCAGATTTCAGGTTTTGGC 57.915 50.000 0.00 0.00 43.54 4.52
3678 3901 3.749665 CCAGATTTCAGGTTTTGGCAA 57.250 42.857 0.00 0.00 0.00 4.52
3679 3902 4.070630 CCAGATTTCAGGTTTTGGCAAA 57.929 40.909 8.93 8.93 0.00 3.68
3680 3903 4.450053 CCAGATTTCAGGTTTTGGCAAAA 58.550 39.130 20.81 20.81 0.00 2.44
3690 3913 3.472652 GTTTTGGCAAAACCCCTTAAGG 58.527 45.455 34.70 15.14 43.78 2.69
3691 3914 2.480642 TTGGCAAAACCCCTTAAGGT 57.519 45.000 20.22 0.16 44.00 3.50
3700 3923 2.617658 ACCCCTTAAGGTTCGAACTCT 58.382 47.619 26.32 18.56 36.44 3.24
3701 3924 2.302157 ACCCCTTAAGGTTCGAACTCTG 59.698 50.000 26.32 12.67 36.44 3.35
3702 3925 2.302157 CCCCTTAAGGTTCGAACTCTGT 59.698 50.000 26.32 12.31 0.00 3.41
3703 3926 3.326747 CCCTTAAGGTTCGAACTCTGTG 58.673 50.000 26.32 14.22 0.00 3.66
3704 3927 3.326747 CCTTAAGGTTCGAACTCTGTGG 58.673 50.000 26.32 18.50 0.00 4.17
3705 3928 3.244112 CCTTAAGGTTCGAACTCTGTGGT 60.244 47.826 26.32 10.15 0.00 4.16
3706 3929 2.240493 AAGGTTCGAACTCTGTGGTG 57.760 50.000 26.32 0.00 0.00 4.17
3707 3930 0.249911 AGGTTCGAACTCTGTGGTGC 60.250 55.000 26.32 7.68 0.00 5.01
3708 3931 1.557443 GGTTCGAACTCTGTGGTGCG 61.557 60.000 26.32 0.00 39.42 5.34
3709 3932 1.954146 TTCGAACTCTGTGGTGCGC 60.954 57.895 0.00 0.00 38.08 6.09
3710 3933 2.636778 TTCGAACTCTGTGGTGCGCA 62.637 55.000 5.66 5.66 38.08 6.09
3711 3934 2.939022 GAACTCTGTGGTGCGCAC 59.061 61.111 32.15 32.15 0.00 5.34
3712 3935 2.943345 GAACTCTGTGGTGCGCACG 61.943 63.158 32.35 20.31 0.00 5.34
3713 3936 3.439513 AACTCTGTGGTGCGCACGA 62.440 57.895 32.35 27.49 0.00 4.35
3714 3937 2.661537 CTCTGTGGTGCGCACGAA 60.662 61.111 32.35 21.31 0.00 3.85
3715 3938 2.661537 TCTGTGGTGCGCACGAAG 60.662 61.111 32.35 26.77 0.00 3.79
3716 3939 2.661537 CTGTGGTGCGCACGAAGA 60.662 61.111 32.35 20.72 0.00 2.87
3717 3940 2.029288 CTGTGGTGCGCACGAAGAT 61.029 57.895 32.35 0.00 0.00 2.40
3718 3941 1.959899 CTGTGGTGCGCACGAAGATC 61.960 60.000 32.35 18.65 0.00 2.75
3719 3942 1.738099 GTGGTGCGCACGAAGATCT 60.738 57.895 32.35 0.00 0.00 2.75
3720 3943 1.446099 TGGTGCGCACGAAGATCTC 60.446 57.895 32.35 17.21 0.00 2.75
3721 3944 1.153745 GGTGCGCACGAAGATCTCT 60.154 57.895 32.35 0.00 0.00 3.10
3722 3945 1.142778 GGTGCGCACGAAGATCTCTC 61.143 60.000 32.35 12.11 0.00 3.20
3723 3946 1.139734 TGCGCACGAAGATCTCTCC 59.860 57.895 5.66 0.00 0.00 3.71
3724 3947 1.315981 TGCGCACGAAGATCTCTCCT 61.316 55.000 5.66 0.00 0.00 3.69
3725 3948 0.593773 GCGCACGAAGATCTCTCCTC 60.594 60.000 0.30 0.00 0.00 3.71
3726 3949 0.030101 CGCACGAAGATCTCTCCTCC 59.970 60.000 0.00 0.00 0.00 4.30
3727 3950 0.387565 GCACGAAGATCTCTCCTCCC 59.612 60.000 0.00 0.00 0.00 4.30
3728 3951 1.036707 CACGAAGATCTCTCCTCCCC 58.963 60.000 0.00 0.00 0.00 4.81
3729 3952 0.105913 ACGAAGATCTCTCCTCCCCC 60.106 60.000 0.00 0.00 0.00 5.40
3730 3953 0.187361 CGAAGATCTCTCCTCCCCCT 59.813 60.000 0.00 0.00 0.00 4.79
3731 3954 1.425831 CGAAGATCTCTCCTCCCCCTA 59.574 57.143 0.00 0.00 0.00 3.53
3732 3955 2.554344 CGAAGATCTCTCCTCCCCCTAG 60.554 59.091 0.00 0.00 0.00 3.02
3733 3956 0.783850 AGATCTCTCCTCCCCCTAGC 59.216 60.000 0.00 0.00 0.00 3.42
3734 3957 0.783850 GATCTCTCCTCCCCCTAGCT 59.216 60.000 0.00 0.00 0.00 3.32
3735 3958 0.783850 ATCTCTCCTCCCCCTAGCTC 59.216 60.000 0.00 0.00 0.00 4.09
3736 3959 0.627768 TCTCTCCTCCCCCTAGCTCA 60.628 60.000 0.00 0.00 0.00 4.26
3737 3960 0.469144 CTCTCCTCCCCCTAGCTCAC 60.469 65.000 0.00 0.00 0.00 3.51
3738 3961 1.830408 CTCCTCCCCCTAGCTCACG 60.830 68.421 0.00 0.00 0.00 4.35
3739 3962 3.541713 CCTCCCCCTAGCTCACGC 61.542 72.222 0.00 0.00 0.00 5.34
3741 3964 2.442272 TCCCCCTAGCTCACGCTC 60.442 66.667 0.00 0.00 45.15 5.03
3742 3965 2.443016 CCCCCTAGCTCACGCTCT 60.443 66.667 0.00 0.00 45.15 4.09
3743 3966 2.494530 CCCCCTAGCTCACGCTCTC 61.495 68.421 0.00 0.00 45.15 3.20
3744 3967 1.754621 CCCCTAGCTCACGCTCTCA 60.755 63.158 0.00 0.00 45.15 3.27
3745 3968 1.112315 CCCCTAGCTCACGCTCTCAT 61.112 60.000 0.00 0.00 45.15 2.90
3746 3969 0.313672 CCCTAGCTCACGCTCTCATC 59.686 60.000 0.00 0.00 45.15 2.92
3747 3970 1.028130 CCTAGCTCACGCTCTCATCA 58.972 55.000 0.00 0.00 45.15 3.07
3748 3971 1.268999 CCTAGCTCACGCTCTCATCAC 60.269 57.143 0.00 0.00 45.15 3.06
3749 3972 1.403323 CTAGCTCACGCTCTCATCACA 59.597 52.381 0.00 0.00 45.15 3.58
3750 3973 0.605083 AGCTCACGCTCTCATCACAA 59.395 50.000 0.00 0.00 45.15 3.33
3751 3974 1.206610 AGCTCACGCTCTCATCACAAT 59.793 47.619 0.00 0.00 45.15 2.71
3752 3975 2.005451 GCTCACGCTCTCATCACAATT 58.995 47.619 0.00 0.00 0.00 2.32
3753 3976 2.417933 GCTCACGCTCTCATCACAATTT 59.582 45.455 0.00 0.00 0.00 1.82
3754 3977 3.484886 GCTCACGCTCTCATCACAATTTC 60.485 47.826 0.00 0.00 0.00 2.17
3755 3978 3.663025 TCACGCTCTCATCACAATTTCA 58.337 40.909 0.00 0.00 0.00 2.69
3756 3979 4.064388 TCACGCTCTCATCACAATTTCAA 58.936 39.130 0.00 0.00 0.00 2.69
3757 3980 4.514816 TCACGCTCTCATCACAATTTCAAA 59.485 37.500 0.00 0.00 0.00 2.69
3758 3981 4.849926 CACGCTCTCATCACAATTTCAAAG 59.150 41.667 0.00 0.00 0.00 2.77
3759 3982 3.850273 CGCTCTCATCACAATTTCAAAGC 59.150 43.478 0.00 0.00 0.00 3.51
3760 3983 4.379186 CGCTCTCATCACAATTTCAAAGCT 60.379 41.667 0.00 0.00 0.00 3.74
3761 3984 5.094134 GCTCTCATCACAATTTCAAAGCTC 58.906 41.667 0.00 0.00 0.00 4.09
3762 3985 5.335426 GCTCTCATCACAATTTCAAAGCTCA 60.335 40.000 0.00 0.00 0.00 4.26
3763 3986 6.250344 TCTCATCACAATTTCAAAGCTCAG 57.750 37.500 0.00 0.00 0.00 3.35
3764 3987 4.801891 TCATCACAATTTCAAAGCTCAGC 58.198 39.130 0.00 0.00 0.00 4.26
3765 3988 4.278919 TCATCACAATTTCAAAGCTCAGCA 59.721 37.500 0.00 0.00 0.00 4.41
3766 3989 3.968649 TCACAATTTCAAAGCTCAGCAC 58.031 40.909 0.00 0.00 0.00 4.40
3767 3990 2.722629 CACAATTTCAAAGCTCAGCACG 59.277 45.455 0.00 0.00 0.00 5.34
3768 3991 2.358898 ACAATTTCAAAGCTCAGCACGT 59.641 40.909 0.00 0.00 0.00 4.49
3769 3992 2.975851 CAATTTCAAAGCTCAGCACGTC 59.024 45.455 0.00 0.00 0.00 4.34
3770 3993 0.581529 TTTCAAAGCTCAGCACGTCG 59.418 50.000 0.00 0.00 0.00 5.12
3771 3994 0.249280 TTCAAAGCTCAGCACGTCGA 60.249 50.000 0.00 0.00 0.00 4.20
3772 3995 0.249280 TCAAAGCTCAGCACGTCGAA 60.249 50.000 0.00 0.00 0.00 3.71
3773 3996 0.111089 CAAAGCTCAGCACGTCGAAC 60.111 55.000 0.00 0.00 0.00 3.95
3774 3997 0.249489 AAAGCTCAGCACGTCGAACT 60.249 50.000 0.00 0.00 0.00 3.01
3775 3998 0.664767 AAGCTCAGCACGTCGAACTC 60.665 55.000 0.00 0.00 0.00 3.01
3776 3999 2.429351 GCTCAGCACGTCGAACTCG 61.429 63.158 0.00 0.00 41.45 4.18
3777 4000 2.428569 TCAGCACGTCGAACTCGC 60.429 61.111 0.00 0.00 39.60 5.03
3778 4001 2.729491 CAGCACGTCGAACTCGCA 60.729 61.111 0.00 0.00 39.60 5.10
3779 4002 2.429236 AGCACGTCGAACTCGCAG 60.429 61.111 0.00 0.00 39.60 5.18
3780 4003 2.428569 GCACGTCGAACTCGCAGA 60.429 61.111 0.00 0.00 39.60 4.26
3781 4004 2.014554 GCACGTCGAACTCGCAGAA 61.015 57.895 0.00 0.00 39.60 3.02
3782 4005 1.767388 CACGTCGAACTCGCAGAAC 59.233 57.895 0.00 0.00 39.60 3.01
3783 4006 0.933047 CACGTCGAACTCGCAGAACA 60.933 55.000 0.00 0.00 39.60 3.18
3784 4007 0.248743 ACGTCGAACTCGCAGAACAA 60.249 50.000 0.00 0.00 39.60 2.83
3785 4008 0.850217 CGTCGAACTCGCAGAACAAA 59.150 50.000 0.00 0.00 39.60 2.83
3786 4009 1.136884 CGTCGAACTCGCAGAACAAAG 60.137 52.381 0.00 0.00 39.60 2.77
3787 4010 1.192534 GTCGAACTCGCAGAACAAAGG 59.807 52.381 0.00 0.00 39.60 3.11
3788 4011 1.067974 TCGAACTCGCAGAACAAAGGA 59.932 47.619 0.00 0.00 39.60 3.36
3789 4012 1.192534 CGAACTCGCAGAACAAAGGAC 59.807 52.381 0.00 0.00 34.09 3.85
3790 4013 2.210116 GAACTCGCAGAACAAAGGACA 58.790 47.619 0.00 0.00 34.09 4.02
3791 4014 1.583054 ACTCGCAGAACAAAGGACAC 58.417 50.000 0.00 0.00 34.09 3.67
3792 4015 1.134521 ACTCGCAGAACAAAGGACACA 60.135 47.619 0.00 0.00 34.09 3.72
3793 4016 2.146342 CTCGCAGAACAAAGGACACAT 58.854 47.619 0.00 0.00 34.09 3.21
3794 4017 1.872952 TCGCAGAACAAAGGACACATG 59.127 47.619 0.00 0.00 0.00 3.21
3795 4018 1.069022 CGCAGAACAAAGGACACATGG 60.069 52.381 0.00 0.00 0.00 3.66
3796 4019 1.336240 GCAGAACAAAGGACACATGGC 60.336 52.381 0.00 0.00 0.00 4.40
3797 4020 2.233271 CAGAACAAAGGACACATGGCT 58.767 47.619 0.00 0.00 0.00 4.75
3798 4021 2.624838 CAGAACAAAGGACACATGGCTT 59.375 45.455 0.00 0.00 0.00 4.35
3799 4022 3.820467 CAGAACAAAGGACACATGGCTTA 59.180 43.478 0.00 0.00 0.00 3.09
3800 4023 4.460382 CAGAACAAAGGACACATGGCTTAT 59.540 41.667 0.00 0.00 0.00 1.73
3801 4024 5.647658 CAGAACAAAGGACACATGGCTTATA 59.352 40.000 0.00 0.00 0.00 0.98
3802 4025 6.319658 CAGAACAAAGGACACATGGCTTATAT 59.680 38.462 0.00 0.00 0.00 0.86
3803 4026 6.891908 AGAACAAAGGACACATGGCTTATATT 59.108 34.615 0.00 0.00 0.00 1.28
3804 4027 6.455360 ACAAAGGACACATGGCTTATATTG 57.545 37.500 0.00 0.00 0.00 1.90
3805 4028 5.360714 ACAAAGGACACATGGCTTATATTGG 59.639 40.000 0.00 0.00 0.00 3.16
3806 4029 4.796110 AGGACACATGGCTTATATTGGT 57.204 40.909 0.00 0.00 0.00 3.67
3807 4030 5.129368 AGGACACATGGCTTATATTGGTT 57.871 39.130 0.00 0.00 0.00 3.67
3808 4031 5.133221 AGGACACATGGCTTATATTGGTTC 58.867 41.667 0.00 0.00 0.00 3.62
3809 4032 4.278419 GGACACATGGCTTATATTGGTTCC 59.722 45.833 0.00 0.00 0.00 3.62
3810 4033 3.882888 ACACATGGCTTATATTGGTTCCG 59.117 43.478 0.00 0.00 0.00 4.30
3811 4034 3.253188 CACATGGCTTATATTGGTTCCGG 59.747 47.826 0.00 0.00 0.00 5.14
3812 4035 3.117663 ACATGGCTTATATTGGTTCCGGT 60.118 43.478 0.00 0.00 0.00 5.28
3813 4036 3.202829 TGGCTTATATTGGTTCCGGTC 57.797 47.619 0.00 0.00 0.00 4.79
3814 4037 2.506231 TGGCTTATATTGGTTCCGGTCA 59.494 45.455 0.00 0.00 0.00 4.02
3815 4038 3.137544 TGGCTTATATTGGTTCCGGTCAT 59.862 43.478 0.00 0.00 0.00 3.06
3816 4039 3.751698 GGCTTATATTGGTTCCGGTCATC 59.248 47.826 0.00 0.00 0.00 2.92
3817 4040 3.432252 GCTTATATTGGTTCCGGTCATCG 59.568 47.826 0.00 0.00 38.88 3.84
3818 4041 4.798263 GCTTATATTGGTTCCGGTCATCGA 60.798 45.833 0.00 0.00 42.43 3.59
3819 4042 5.477607 TTATATTGGTTCCGGTCATCGAT 57.522 39.130 0.00 0.00 42.43 3.59
3820 4043 1.953559 ATTGGTTCCGGTCATCGATG 58.046 50.000 19.61 19.61 42.43 3.84
3821 4044 0.742990 TTGGTTCCGGTCATCGATGC 60.743 55.000 20.81 14.84 42.43 3.91
3822 4045 2.237751 GGTTCCGGTCATCGATGCG 61.238 63.158 20.81 17.94 42.43 4.73
3823 4046 2.106131 TTCCGGTCATCGATGCGG 59.894 61.111 28.29 28.29 42.43 5.69
3824 4047 2.717044 TTCCGGTCATCGATGCGGT 61.717 57.895 30.74 0.00 42.43 5.68
3825 4048 2.899345 TTCCGGTCATCGATGCGGTG 62.899 60.000 30.74 17.39 42.43 4.94
3826 4049 2.202743 CGGTCATCGATGCGGTGT 60.203 61.111 20.81 0.00 39.21 4.16
3827 4050 1.065109 CGGTCATCGATGCGGTGTA 59.935 57.895 20.81 0.00 39.21 2.90
3828 4051 0.526739 CGGTCATCGATGCGGTGTAA 60.527 55.000 20.81 0.00 39.21 2.41
3829 4052 1.865865 GGTCATCGATGCGGTGTAAT 58.134 50.000 20.81 0.00 39.21 1.89
3830 4053 2.606065 CGGTCATCGATGCGGTGTAATA 60.606 50.000 20.81 0.00 39.21 0.98
3831 4054 2.729882 GGTCATCGATGCGGTGTAATAC 59.270 50.000 20.81 9.73 39.21 1.89
3832 4055 2.729882 GTCATCGATGCGGTGTAATACC 59.270 50.000 20.81 0.00 46.56 2.73
3844 4067 5.672421 GGTGTAATACCCTACTTCAGTGT 57.328 43.478 0.00 0.00 44.15 3.55
3845 4068 5.416947 GGTGTAATACCCTACTTCAGTGTG 58.583 45.833 0.00 0.00 44.15 3.82
3846 4069 5.416947 GTGTAATACCCTACTTCAGTGTGG 58.583 45.833 0.00 0.00 0.00 4.17
3847 4070 5.046807 GTGTAATACCCTACTTCAGTGTGGT 60.047 44.000 7.24 7.24 37.17 4.16
3848 4071 4.553330 AATACCCTACTTCAGTGTGGTG 57.447 45.455 10.84 2.20 35.67 4.17
3849 4072 1.802553 ACCCTACTTCAGTGTGGTGT 58.197 50.000 2.37 0.00 33.74 4.16
3850 4073 1.416401 ACCCTACTTCAGTGTGGTGTG 59.584 52.381 2.37 0.00 33.74 3.82
3851 4074 1.270839 CCCTACTTCAGTGTGGTGTGG 60.271 57.143 0.00 0.00 0.00 4.17
3852 4075 1.416401 CCTACTTCAGTGTGGTGTGGT 59.584 52.381 0.00 0.00 0.00 4.16
3853 4076 2.483876 CTACTTCAGTGTGGTGTGGTG 58.516 52.381 0.00 0.00 0.00 4.17
3854 4077 0.107214 ACTTCAGTGTGGTGTGGTGG 60.107 55.000 0.00 0.00 0.00 4.61
3855 4078 0.180171 CTTCAGTGTGGTGTGGTGGA 59.820 55.000 0.00 0.00 0.00 4.02
3856 4079 0.843309 TTCAGTGTGGTGTGGTGGAT 59.157 50.000 0.00 0.00 0.00 3.41
3857 4080 0.843309 TCAGTGTGGTGTGGTGGATT 59.157 50.000 0.00 0.00 0.00 3.01
3858 4081 0.953727 CAGTGTGGTGTGGTGGATTG 59.046 55.000 0.00 0.00 0.00 2.67
3859 4082 0.823356 AGTGTGGTGTGGTGGATTGC 60.823 55.000 0.00 0.00 0.00 3.56
3860 4083 0.823356 GTGTGGTGTGGTGGATTGCT 60.823 55.000 0.00 0.00 0.00 3.91
3861 4084 0.106268 TGTGGTGTGGTGGATTGCTT 60.106 50.000 0.00 0.00 0.00 3.91
3862 4085 0.598065 GTGGTGTGGTGGATTGCTTC 59.402 55.000 0.00 0.00 0.00 3.86
3863 4086 0.478072 TGGTGTGGTGGATTGCTTCT 59.522 50.000 0.00 0.00 0.00 2.85
3864 4087 1.133513 TGGTGTGGTGGATTGCTTCTT 60.134 47.619 0.00 0.00 0.00 2.52
3865 4088 1.270550 GGTGTGGTGGATTGCTTCTTG 59.729 52.381 0.00 0.00 0.00 3.02
3866 4089 1.270550 GTGTGGTGGATTGCTTCTTGG 59.729 52.381 0.00 0.00 0.00 3.61
3867 4090 0.890683 GTGGTGGATTGCTTCTTGGG 59.109 55.000 0.00 0.00 0.00 4.12
3868 4091 0.899717 TGGTGGATTGCTTCTTGGGC 60.900 55.000 0.00 0.00 0.00 5.36
3869 4092 0.613012 GGTGGATTGCTTCTTGGGCT 60.613 55.000 0.00 0.00 0.00 5.19
3870 4093 0.529378 GTGGATTGCTTCTTGGGCTG 59.471 55.000 0.00 0.00 0.00 4.85
3871 4094 0.405198 TGGATTGCTTCTTGGGCTGA 59.595 50.000 0.00 0.00 0.00 4.26
3872 4095 1.101331 GGATTGCTTCTTGGGCTGAG 58.899 55.000 0.00 0.00 0.00 3.35
3873 4096 1.101331 GATTGCTTCTTGGGCTGAGG 58.899 55.000 0.00 0.00 0.00 3.86
3874 4097 0.700564 ATTGCTTCTTGGGCTGAGGA 59.299 50.000 0.00 0.00 0.00 3.71
3875 4098 0.700564 TTGCTTCTTGGGCTGAGGAT 59.299 50.000 0.00 0.00 0.00 3.24
3876 4099 0.034767 TGCTTCTTGGGCTGAGGATG 60.035 55.000 0.00 0.00 0.00 3.51
3877 4100 0.254178 GCTTCTTGGGCTGAGGATGA 59.746 55.000 0.00 0.00 0.00 2.92
3878 4101 1.340405 GCTTCTTGGGCTGAGGATGAA 60.340 52.381 0.00 0.00 0.00 2.57
3879 4102 2.363683 CTTCTTGGGCTGAGGATGAAC 58.636 52.381 0.00 0.00 0.00 3.18
3880 4103 0.250234 TCTTGGGCTGAGGATGAACG 59.750 55.000 0.00 0.00 0.00 3.95
3881 4104 0.250234 CTTGGGCTGAGGATGAACGA 59.750 55.000 0.00 0.00 0.00 3.85
3882 4105 0.250234 TTGGGCTGAGGATGAACGAG 59.750 55.000 0.00 0.00 0.00 4.18
3883 4106 0.904865 TGGGCTGAGGATGAACGAGT 60.905 55.000 0.00 0.00 0.00 4.18
3884 4107 1.112113 GGGCTGAGGATGAACGAGTA 58.888 55.000 0.00 0.00 0.00 2.59
3885 4108 1.202428 GGGCTGAGGATGAACGAGTAC 60.202 57.143 0.00 0.00 0.00 2.73
3886 4109 1.476891 GGCTGAGGATGAACGAGTACA 59.523 52.381 0.00 0.00 0.00 2.90
3887 4110 2.094182 GGCTGAGGATGAACGAGTACAA 60.094 50.000 0.00 0.00 0.00 2.41
3888 4111 3.182967 GCTGAGGATGAACGAGTACAAG 58.817 50.000 0.00 0.00 0.00 3.16
3889 4112 3.119459 GCTGAGGATGAACGAGTACAAGA 60.119 47.826 0.00 0.00 0.00 3.02
3890 4113 4.667262 CTGAGGATGAACGAGTACAAGAG 58.333 47.826 0.00 0.00 0.00 2.85
3891 4114 4.332828 TGAGGATGAACGAGTACAAGAGA 58.667 43.478 0.00 0.00 0.00 3.10
3892 4115 4.765339 TGAGGATGAACGAGTACAAGAGAA 59.235 41.667 0.00 0.00 0.00 2.87
3893 4116 5.106118 TGAGGATGAACGAGTACAAGAGAAG 60.106 44.000 0.00 0.00 0.00 2.85
3894 4117 5.010933 AGGATGAACGAGTACAAGAGAAGA 58.989 41.667 0.00 0.00 0.00 2.87
3895 4118 5.477291 AGGATGAACGAGTACAAGAGAAGAA 59.523 40.000 0.00 0.00 0.00 2.52
3896 4119 5.573669 GGATGAACGAGTACAAGAGAAGAAC 59.426 44.000 0.00 0.00 0.00 3.01
3897 4120 5.509716 TGAACGAGTACAAGAGAAGAACA 57.490 39.130 0.00 0.00 0.00 3.18
3898 4121 5.898174 TGAACGAGTACAAGAGAAGAACAA 58.102 37.500 0.00 0.00 0.00 2.83
3899 4122 5.747197 TGAACGAGTACAAGAGAAGAACAAC 59.253 40.000 0.00 0.00 0.00 3.32
3900 4123 4.618965 ACGAGTACAAGAGAAGAACAACC 58.381 43.478 0.00 0.00 0.00 3.77
3901 4124 4.341520 ACGAGTACAAGAGAAGAACAACCT 59.658 41.667 0.00 0.00 0.00 3.50
3902 4125 5.163437 ACGAGTACAAGAGAAGAACAACCTT 60.163 40.000 0.00 0.00 0.00 3.50
3903 4126 5.402867 CGAGTACAAGAGAAGAACAACCTTC 59.597 44.000 0.00 0.00 42.07 3.46
3911 4134 4.608948 GAAGAACAACCTTCTGAGGAGA 57.391 45.455 0.00 0.00 46.74 3.71
3912 4135 4.565022 GAAGAACAACCTTCTGAGGAGAG 58.435 47.826 0.00 0.00 46.74 3.20
3913 4136 2.903135 AGAACAACCTTCTGAGGAGAGG 59.097 50.000 0.00 0.00 46.74 3.69
3914 4137 2.407340 ACAACCTTCTGAGGAGAGGT 57.593 50.000 0.00 0.00 46.74 3.85
3915 4138 1.974236 ACAACCTTCTGAGGAGAGGTG 59.026 52.381 0.00 0.00 46.74 4.00
3916 4139 1.974236 CAACCTTCTGAGGAGAGGTGT 59.026 52.381 0.00 0.00 46.74 4.16
3917 4140 1.931635 ACCTTCTGAGGAGAGGTGTC 58.068 55.000 0.00 0.00 46.74 3.67
3918 4141 1.190643 CCTTCTGAGGAGAGGTGTCC 58.809 60.000 0.00 0.00 46.74 4.02
3924 4147 2.677508 AGGAGAGGTGTCCTTGAGC 58.322 57.895 0.00 0.00 45.39 4.26
3925 4148 0.116143 AGGAGAGGTGTCCTTGAGCT 59.884 55.000 0.00 0.00 45.39 4.09
3926 4149 0.534873 GGAGAGGTGTCCTTGAGCTC 59.465 60.000 6.82 6.82 38.08 4.09
3927 4150 0.172352 GAGAGGTGTCCTTGAGCTCG 59.828 60.000 9.64 0.00 41.80 5.03
3928 4151 1.216710 GAGGTGTCCTTGAGCTCGG 59.783 63.158 9.64 5.19 31.76 4.63
3929 4152 1.534235 AGGTGTCCTTGAGCTCGGT 60.534 57.895 9.64 0.00 0.00 4.69
3930 4153 1.374758 GGTGTCCTTGAGCTCGGTG 60.375 63.158 9.64 1.28 0.00 4.94
3931 4154 1.666011 GTGTCCTTGAGCTCGGTGA 59.334 57.895 9.64 1.85 0.00 4.02
3932 4155 0.389166 GTGTCCTTGAGCTCGGTGAG 60.389 60.000 9.64 4.37 0.00 3.51
3941 4164 3.957260 CTCGGTGAGCTTGTGTGG 58.043 61.111 0.00 0.00 0.00 4.17
3942 4165 1.069765 CTCGGTGAGCTTGTGTGGT 59.930 57.895 0.00 0.00 0.00 4.16
3943 4166 0.532862 CTCGGTGAGCTTGTGTGGTT 60.533 55.000 0.00 0.00 0.00 3.67
3944 4167 0.813610 TCGGTGAGCTTGTGTGGTTG 60.814 55.000 0.00 0.00 0.00 3.77
3945 4168 1.785041 CGGTGAGCTTGTGTGGTTGG 61.785 60.000 0.00 0.00 0.00 3.77
3946 4169 1.455383 GGTGAGCTTGTGTGGTTGGG 61.455 60.000 0.00 0.00 0.00 4.12
3947 4170 1.152777 TGAGCTTGTGTGGTTGGGG 60.153 57.895 0.00 0.00 0.00 4.96
3948 4171 1.150536 GAGCTTGTGTGGTTGGGGA 59.849 57.895 0.00 0.00 0.00 4.81
3949 4172 0.251341 GAGCTTGTGTGGTTGGGGAT 60.251 55.000 0.00 0.00 0.00 3.85
3950 4173 0.540365 AGCTTGTGTGGTTGGGGATG 60.540 55.000 0.00 0.00 0.00 3.51
3951 4174 0.539438 GCTTGTGTGGTTGGGGATGA 60.539 55.000 0.00 0.00 0.00 2.92
3952 4175 1.892329 GCTTGTGTGGTTGGGGATGAT 60.892 52.381 0.00 0.00 0.00 2.45
3953 4176 2.094675 CTTGTGTGGTTGGGGATGATC 58.905 52.381 0.00 0.00 0.00 2.92
3954 4177 1.371467 TGTGTGGTTGGGGATGATCT 58.629 50.000 0.00 0.00 0.00 2.75
3955 4178 1.004628 TGTGTGGTTGGGGATGATCTG 59.995 52.381 0.00 0.00 0.00 2.90
3956 4179 1.281867 GTGTGGTTGGGGATGATCTGA 59.718 52.381 0.00 0.00 0.00 3.27
3957 4180 1.991813 TGTGGTTGGGGATGATCTGAA 59.008 47.619 0.00 0.00 0.00 3.02
3958 4181 2.582172 TGTGGTTGGGGATGATCTGAAT 59.418 45.455 0.00 0.00 0.00 2.57
3959 4182 2.954318 GTGGTTGGGGATGATCTGAATG 59.046 50.000 0.00 0.00 0.00 2.67
3960 4183 2.091720 TGGTTGGGGATGATCTGAATGG 60.092 50.000 0.00 0.00 0.00 3.16
3961 4184 2.091665 GGTTGGGGATGATCTGAATGGT 60.092 50.000 0.00 0.00 0.00 3.55
3962 4185 3.217626 GTTGGGGATGATCTGAATGGTC 58.782 50.000 0.00 0.00 0.00 4.02
3963 4186 1.776667 TGGGGATGATCTGAATGGTCC 59.223 52.381 0.00 0.00 0.00 4.46
3964 4187 1.271054 GGGGATGATCTGAATGGTCCG 60.271 57.143 0.00 0.00 0.00 4.79
3965 4188 1.694150 GGGATGATCTGAATGGTCCGA 59.306 52.381 0.00 0.00 0.00 4.55
3966 4189 2.289320 GGGATGATCTGAATGGTCCGAG 60.289 54.545 0.00 0.00 0.00 4.63
3967 4190 2.630098 GGATGATCTGAATGGTCCGAGA 59.370 50.000 0.00 0.00 0.00 4.04
3968 4191 3.260380 GGATGATCTGAATGGTCCGAGAT 59.740 47.826 0.00 0.00 0.00 2.75
3969 4192 4.493547 GATGATCTGAATGGTCCGAGATC 58.506 47.826 0.00 0.00 40.80 2.75
3970 4193 2.630098 TGATCTGAATGGTCCGAGATCC 59.370 50.000 13.48 0.00 40.03 3.36
3971 4194 2.159179 TCTGAATGGTCCGAGATCCA 57.841 50.000 0.00 0.00 38.14 3.41
3972 4195 2.466846 TCTGAATGGTCCGAGATCCAA 58.533 47.619 0.00 0.00 37.27 3.53
3973 4196 2.432146 TCTGAATGGTCCGAGATCCAAG 59.568 50.000 0.00 0.00 37.27 3.61
3974 4197 2.432146 CTGAATGGTCCGAGATCCAAGA 59.568 50.000 0.00 0.00 37.27 3.02
3975 4198 3.041211 TGAATGGTCCGAGATCCAAGAT 58.959 45.455 0.00 0.00 37.27 2.40
3976 4199 3.181462 TGAATGGTCCGAGATCCAAGATG 60.181 47.826 0.00 0.00 37.27 2.90
3977 4200 0.465705 TGGTCCGAGATCCAAGATGC 59.534 55.000 0.00 0.00 0.00 3.91
3978 4201 0.755686 GGTCCGAGATCCAAGATGCT 59.244 55.000 0.00 0.00 0.00 3.79
3979 4202 1.270041 GGTCCGAGATCCAAGATGCTC 60.270 57.143 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.931172 CACAAATCCTAGTAACGGCGG 59.069 52.381 13.24 0.00 0.00 6.13
110 111 2.744202 CCACGAAATTGAACTGAGAGGG 59.256 50.000 0.00 0.00 0.00 4.30
116 117 2.484264 GGTCCTCCACGAAATTGAACTG 59.516 50.000 0.00 0.00 0.00 3.16
130 131 2.691252 AATCCCCACGGGTCCTCC 60.691 66.667 0.41 0.00 44.74 4.30
138 139 4.143333 AGCGACGGAATCCCCACG 62.143 66.667 0.00 0.00 37.40 4.94
152 153 0.712775 CGAGCAGAAGAAGAACAGCG 59.287 55.000 0.00 0.00 0.00 5.18
187 188 3.338249 ACATCTCACTGAATTTCCGTGG 58.662 45.455 17.47 10.46 0.00 4.94
188 189 3.061295 CGACATCTCACTGAATTTCCGTG 59.939 47.826 13.07 13.07 0.00 4.94
199 200 2.125912 GCGCACCGACATCTCACT 60.126 61.111 0.30 0.00 0.00 3.41
216 217 3.252458 CCCCGAAACTGAAACCAACTAAG 59.748 47.826 0.00 0.00 0.00 2.18
222 223 2.625790 CAAATCCCCGAAACTGAAACCA 59.374 45.455 0.00 0.00 0.00 3.67
263 264 2.839486 AAACGCACATCAGAGGAGAA 57.161 45.000 0.00 0.00 0.00 2.87
264 265 2.839486 AAAACGCACATCAGAGGAGA 57.161 45.000 0.00 0.00 0.00 3.71
266 267 2.346803 GCTAAAACGCACATCAGAGGA 58.653 47.619 0.00 0.00 0.00 3.71
392 412 2.683742 CGGGGACAGCAAGATTACCAAT 60.684 50.000 0.00 0.00 0.00 3.16
393 413 1.339631 CGGGGACAGCAAGATTACCAA 60.340 52.381 0.00 0.00 0.00 3.67
406 426 0.909610 AGATTCAGCTTCCGGGGACA 60.910 55.000 0.00 0.00 0.00 4.02
447 470 6.003326 TCCAGAATTGAGATTTTGTACTGCA 58.997 36.000 0.00 0.00 0.00 4.41
448 471 6.317857 GTCCAGAATTGAGATTTTGTACTGC 58.682 40.000 0.00 0.00 0.00 4.40
449 472 6.368791 TCGTCCAGAATTGAGATTTTGTACTG 59.631 38.462 0.00 0.00 0.00 2.74
473 496 1.743252 CCCTCTGCGCCACTTCTTC 60.743 63.158 4.18 0.00 0.00 2.87
489 513 4.208686 CGACCCACGCTAGCTCCC 62.209 72.222 13.93 0.00 34.51 4.30
561 585 2.359850 TGGACCATGGCAGAACGC 60.360 61.111 13.04 0.00 41.28 4.84
562 586 1.302431 TGTGGACCATGGCAGAACG 60.302 57.895 13.04 0.00 0.00 3.95
563 587 0.250901 AGTGTGGACCATGGCAGAAC 60.251 55.000 13.04 6.08 0.00 3.01
564 588 1.278985 CTAGTGTGGACCATGGCAGAA 59.721 52.381 13.04 0.00 0.00 3.02
565 589 0.904649 CTAGTGTGGACCATGGCAGA 59.095 55.000 13.04 0.00 0.00 4.26
566 590 0.904649 TCTAGTGTGGACCATGGCAG 59.095 55.000 13.04 0.00 0.00 4.85
567 591 0.904649 CTCTAGTGTGGACCATGGCA 59.095 55.000 13.04 0.00 0.00 4.92
612 637 8.581253 AAAAATAATCTGGAAATCGACTTCCT 57.419 30.769 24.71 8.61 44.57 3.36
635 660 7.083858 GCAGAACACACATGCTTATAGAAAAA 58.916 34.615 0.00 0.00 37.00 1.94
636 661 6.349280 GGCAGAACACACATGCTTATAGAAAA 60.349 38.462 0.00 0.00 39.88 2.29
638 663 4.635765 GGCAGAACACACATGCTTATAGAA 59.364 41.667 0.00 0.00 39.88 2.10
639 664 4.191544 GGCAGAACACACATGCTTATAGA 58.808 43.478 0.00 0.00 39.88 1.98
640 665 3.313526 GGGCAGAACACACATGCTTATAG 59.686 47.826 0.00 0.00 39.88 1.31
641 666 3.278574 GGGCAGAACACACATGCTTATA 58.721 45.455 0.00 0.00 39.88 0.98
642 667 2.094675 GGGCAGAACACACATGCTTAT 58.905 47.619 0.00 0.00 39.88 1.73
643 668 1.202867 TGGGCAGAACACACATGCTTA 60.203 47.619 0.00 0.00 39.88 3.09
647 672 2.718094 TGTGGGCAGAACACACATG 58.282 52.632 0.00 0.00 43.35 3.21
672 698 7.256511 CCAAATACTTAAAAGTGTCCCCCAAAT 60.257 37.037 5.62 0.00 40.07 2.32
681 707 8.837389 GTGAGACTTCCAAATACTTAAAAGTGT 58.163 33.333 5.62 0.00 40.07 3.55
703 729 5.514279 CAAACCTAAGCTTTGAAGTGTGAG 58.486 41.667 3.20 0.00 31.32 3.51
704 730 4.202010 GCAAACCTAAGCTTTGAAGTGTGA 60.202 41.667 3.20 0.00 31.32 3.58
716 742 4.256920 TCTTCAGAGATGCAAACCTAAGC 58.743 43.478 0.00 0.00 0.00 3.09
720 746 4.077822 CCTTTCTTCAGAGATGCAAACCT 58.922 43.478 0.00 0.00 0.00 3.50
721 747 3.823304 ACCTTTCTTCAGAGATGCAAACC 59.177 43.478 0.00 0.00 0.00 3.27
726 754 2.746362 CCACACCTTTCTTCAGAGATGC 59.254 50.000 0.00 0.00 0.00 3.91
727 755 4.277515 TCCACACCTTTCTTCAGAGATG 57.722 45.455 0.00 0.00 0.00 2.90
756 784 5.726980 ATGCAACTTCCTTTATTCTGCAA 57.273 34.783 0.00 0.00 41.24 4.08
766 794 4.486125 ACCAACAAAATGCAACTTCCTT 57.514 36.364 0.00 0.00 0.00 3.36
769 797 7.713764 AGATAAACCAACAAAATGCAACTTC 57.286 32.000 0.00 0.00 0.00 3.01
775 803 7.945033 TGAGAAAGATAAACCAACAAAATGC 57.055 32.000 0.00 0.00 0.00 3.56
791 819 4.435137 TCCCTACCCTCAAATGAGAAAGA 58.565 43.478 11.94 0.00 44.74 2.52
806 835 3.848978 AGGACCACCTATATCCCTACC 57.151 52.381 0.00 0.00 45.83 3.18
818 847 4.010349 CTCCAAACTATTCAAGGACCACC 58.990 47.826 0.00 0.00 0.00 4.61
819 848 3.440522 GCTCCAAACTATTCAAGGACCAC 59.559 47.826 0.00 0.00 0.00 4.16
902 933 9.474920 GAAAATCATGTGAAAAACCATAACTCA 57.525 29.630 0.00 0.00 0.00 3.41
911 942 7.678194 TCAGAACGAAAATCATGTGAAAAAC 57.322 32.000 0.00 0.00 0.00 2.43
932 963 5.911752 AGAATAGACAGTTGGCTACATCAG 58.088 41.667 0.00 0.00 38.71 2.90
934 965 6.478344 CAGAAGAATAGACAGTTGGCTACATC 59.522 42.308 0.00 0.00 38.71 3.06
945 976 4.825422 TGCCTTGACAGAAGAATAGACAG 58.175 43.478 0.00 0.00 0.00 3.51
987 1019 2.813754 TGCCTTCATTGCACTGTAGAAC 59.186 45.455 11.53 4.95 32.85 3.01
996 1028 1.936436 GCGATGGTGCCTTCATTGCA 61.936 55.000 14.52 0.00 46.15 4.08
997 1029 1.226773 GCGATGGTGCCTTCATTGC 60.227 57.895 7.27 7.27 42.54 3.56
1017 1088 2.930950 CCAGGGAAACACTGAACAAGA 58.069 47.619 2.37 0.00 38.20 3.02
1149 1220 5.396660 GCCATTTGGGGTTTCATGTATGAAT 60.397 40.000 8.02 0.00 40.84 2.57
1177 1248 6.575267 ACGCCCTTTGTAAAACAAAAATAGT 58.425 32.000 6.67 3.21 46.15 2.12
1184 1255 3.695060 TCAGAACGCCCTTTGTAAAACAA 59.305 39.130 0.00 0.00 36.11 2.83
1189 1260 2.875933 CAGTTCAGAACGCCCTTTGTAA 59.124 45.455 7.68 0.00 36.23 2.41
1190 1261 2.158871 ACAGTTCAGAACGCCCTTTGTA 60.159 45.455 7.68 0.00 36.23 2.41
1192 1263 1.308998 ACAGTTCAGAACGCCCTTTG 58.691 50.000 7.68 2.36 36.23 2.77
1194 1265 1.134220 TCAACAGTTCAGAACGCCCTT 60.134 47.619 7.68 0.00 36.23 3.95
1199 1270 5.666969 TTACCAATCAACAGTTCAGAACG 57.333 39.130 7.68 5.73 36.23 3.95
1200 1271 9.959749 TTATTTTACCAATCAACAGTTCAGAAC 57.040 29.630 5.00 5.00 0.00 3.01
1332 1404 1.071699 GTGCCAGCCGGAATATTAGGA 59.928 52.381 5.05 0.00 0.00 2.94
1337 1409 3.508845 ATTTAGTGCCAGCCGGAATAT 57.491 42.857 5.05 0.00 0.00 1.28
1343 1415 2.288152 ACACAAAATTTAGTGCCAGCCG 60.288 45.455 0.00 0.00 39.30 5.52
1345 1417 2.979813 CGACACAAAATTTAGTGCCAGC 59.020 45.455 0.00 0.00 39.30 4.85
1347 1419 4.498345 GGAACGACACAAAATTTAGTGCCA 60.498 41.667 0.00 0.00 39.30 4.92
1370 1442 4.842139 AAAGTTCGAGCAATTACTAGCG 57.158 40.909 1.01 0.00 35.48 4.26
1413 1485 3.682858 CCAAAAGAAGAAGCCATGCATTG 59.317 43.478 0.00 0.00 0.00 2.82
1422 1494 2.297315 CCCCTGAACCAAAAGAAGAAGC 59.703 50.000 0.00 0.00 0.00 3.86
1426 1498 2.893489 CCTTCCCCTGAACCAAAAGAAG 59.107 50.000 0.00 0.00 0.00 2.85
1429 1501 2.239400 GACCTTCCCCTGAACCAAAAG 58.761 52.381 0.00 0.00 0.00 2.27
1753 1838 6.764308 CTTCTATGGAAGCAAAATCAGGAA 57.236 37.500 5.83 0.00 41.80 3.36
1794 1879 4.551671 AGTCTTATGCAGGATACCAGACT 58.448 43.478 9.46 9.46 32.92 3.24
2015 2113 0.038599 ATCCACATCCAAGCTGCACA 59.961 50.000 1.02 0.00 0.00 4.57
2227 2329 5.069119 TGAACTATAGATGCACCCTGTAGTG 59.931 44.000 20.39 4.67 38.18 2.74
2333 2435 2.891112 CTCTCTGATGGTCTGTTCTGC 58.109 52.381 0.00 0.00 0.00 4.26
2732 2834 0.253044 ATCGGCTACATGCACAAGGT 59.747 50.000 0.00 0.00 45.15 3.50
2736 2838 0.179076 CTCCATCGGCTACATGCACA 60.179 55.000 0.00 0.00 45.15 4.57
2857 2959 1.606313 CCCCGCTTGAACCAACCAT 60.606 57.895 0.00 0.00 0.00 3.55
2874 2976 2.153547 TTTTAAGCTGCCTTGCGCCC 62.154 55.000 4.18 0.00 38.13 6.13
2995 3097 2.356069 GCCGGGATCATCTTTTTCAGTC 59.644 50.000 2.18 0.00 0.00 3.51
3117 3219 1.269723 GCAGGTTTAACAACTGAGGCC 59.730 52.381 0.00 0.00 32.90 5.19
3119 3221 4.647424 TTTGCAGGTTTAACAACTGAGG 57.353 40.909 5.72 0.00 32.90 3.86
3192 3294 4.202441 AGATTCGGTATGCAAAGCTCAAT 58.798 39.130 0.00 0.00 0.00 2.57
3193 3295 3.609853 AGATTCGGTATGCAAAGCTCAA 58.390 40.909 0.00 0.00 0.00 3.02
3194 3296 3.266510 AGATTCGGTATGCAAAGCTCA 57.733 42.857 0.00 0.00 0.00 4.26
3196 3298 4.067896 CCATAGATTCGGTATGCAAAGCT 58.932 43.478 0.00 0.00 0.00 3.74
3197 3299 3.815401 ACCATAGATTCGGTATGCAAAGC 59.185 43.478 0.00 0.00 32.31 3.51
3198 3300 4.319766 GCACCATAGATTCGGTATGCAAAG 60.320 45.833 0.00 0.00 32.98 2.77
3234 3336 4.306600 TGTACATATTGCTGATAGCGTGG 58.693 43.478 0.00 0.00 46.26 4.94
3307 3409 2.093288 CCAGCTCTACCAGATTTCAGCA 60.093 50.000 0.00 0.00 0.00 4.41
3313 3415 1.478510 CACGACCAGCTCTACCAGATT 59.521 52.381 0.00 0.00 0.00 2.40
3423 3642 0.956902 TGCATGCGCATGACAAGTCT 60.957 50.000 45.47 11.86 45.36 3.24
3546 3766 7.944061 ACACAAACTCAAATCATTCATGAGAA 58.056 30.769 6.15 0.00 42.48 2.87
3578 3798 7.776933 CAACACTTGCACTATCATACACTAT 57.223 36.000 0.00 0.00 0.00 2.12
3594 3814 0.639756 GCAAACACACGCAACACTTG 59.360 50.000 0.00 0.00 0.00 3.16
3595 3815 0.457681 GGCAAACACACGCAACACTT 60.458 50.000 0.00 0.00 0.00 3.16
3615 3835 8.039603 TGTTTTGTTCGCATATAAGAGTTCAT 57.960 30.769 0.00 0.00 0.00 2.57
3625 3845 8.594881 TTACCAAATTTGTTTTGTTCGCATAT 57.405 26.923 16.73 0.00 42.68 1.78
3626 3846 8.594881 ATTACCAAATTTGTTTTGTTCGCATA 57.405 26.923 16.73 0.00 42.68 3.14
3627 3847 6.910536 TTACCAAATTTGTTTTGTTCGCAT 57.089 29.167 16.73 0.00 42.68 4.73
3628 3848 6.910536 ATTACCAAATTTGTTTTGTTCGCA 57.089 29.167 16.73 0.00 42.68 5.10
3629 3849 8.067780 AGTATTACCAAATTTGTTTTGTTCGC 57.932 30.769 16.73 0.00 42.68 4.70
3630 3850 9.458374 AGAGTATTACCAAATTTGTTTTGTTCG 57.542 29.630 16.73 1.78 42.68 3.95
3653 3876 3.057033 CCAAAACCTGAAATCTGGCAGAG 60.057 47.826 23.24 10.34 38.38 3.35
3654 3877 2.892852 CCAAAACCTGAAATCTGGCAGA 59.107 45.455 21.19 21.19 38.38 4.26
3655 3878 2.611224 GCCAAAACCTGAAATCTGGCAG 60.611 50.000 8.58 8.58 46.87 4.85
3656 3879 1.344114 GCCAAAACCTGAAATCTGGCA 59.656 47.619 6.03 0.00 46.87 4.92
3657 3880 2.084610 GCCAAAACCTGAAATCTGGC 57.915 50.000 6.28 0.00 42.28 4.85
3659 3882 5.408204 GTTTTGCCAAAACCTGAAATCTG 57.592 39.130 19.89 0.00 43.78 2.90
3669 3892 3.118186 ACCTTAAGGGGTTTTGCCAAAAC 60.118 43.478 25.31 21.88 43.05 2.43
3670 3893 3.116174 ACCTTAAGGGGTTTTGCCAAAA 58.884 40.909 25.31 0.00 40.27 2.44
3671 3894 2.765502 ACCTTAAGGGGTTTTGCCAAA 58.234 42.857 25.31 0.00 40.27 3.28
3672 3895 2.480642 ACCTTAAGGGGTTTTGCCAA 57.519 45.000 25.31 0.00 40.27 4.52
3673 3896 2.480642 AACCTTAAGGGGTTTTGCCA 57.519 45.000 25.31 0.00 46.21 4.92
3680 3903 2.302157 CAGAGTTCGAACCTTAAGGGGT 59.698 50.000 25.31 12.84 42.05 4.95
3681 3904 2.302157 ACAGAGTTCGAACCTTAAGGGG 59.698 50.000 25.31 13.82 40.27 4.79
3682 3905 3.326747 CACAGAGTTCGAACCTTAAGGG 58.673 50.000 25.31 8.14 40.27 3.95
3683 3906 3.244112 ACCACAGAGTTCGAACCTTAAGG 60.244 47.826 24.22 20.42 42.17 2.69
3684 3907 3.741344 CACCACAGAGTTCGAACCTTAAG 59.259 47.826 24.22 12.47 0.00 1.85
3685 3908 3.724374 CACCACAGAGTTCGAACCTTAA 58.276 45.455 24.22 0.00 0.00 1.85
3686 3909 2.547218 GCACCACAGAGTTCGAACCTTA 60.547 50.000 24.22 0.00 0.00 2.69
3687 3910 1.810412 GCACCACAGAGTTCGAACCTT 60.810 52.381 24.22 10.36 0.00 3.50
3688 3911 0.249911 GCACCACAGAGTTCGAACCT 60.250 55.000 24.22 17.39 0.00 3.50
3689 3912 1.557443 CGCACCACAGAGTTCGAACC 61.557 60.000 24.22 15.46 0.00 3.62
3690 3913 1.853319 CGCACCACAGAGTTCGAAC 59.147 57.895 20.71 20.71 0.00 3.95
3691 3914 1.954146 GCGCACCACAGAGTTCGAA 60.954 57.895 0.30 0.00 0.00 3.71
3692 3915 2.355837 GCGCACCACAGAGTTCGA 60.356 61.111 0.30 0.00 0.00 3.71
3693 3916 2.661537 TGCGCACCACAGAGTTCG 60.662 61.111 5.66 0.00 0.00 3.95
3694 3917 2.939022 GTGCGCACCACAGAGTTC 59.061 61.111 30.12 0.00 44.06 3.01
3695 3918 2.916502 TTCGTGCGCACCACAGAGTT 62.917 55.000 33.23 0.00 44.91 3.01
3696 3919 3.439513 TTCGTGCGCACCACAGAGT 62.440 57.895 33.23 0.00 44.91 3.24
3697 3920 2.661537 TTCGTGCGCACCACAGAG 60.662 61.111 33.23 18.77 44.91 3.35
3698 3921 2.434658 ATCTTCGTGCGCACCACAGA 62.435 55.000 33.23 28.45 44.91 3.41
3699 3922 1.959899 GATCTTCGTGCGCACCACAG 61.960 60.000 33.23 24.67 44.91 3.66
3700 3923 2.027073 GATCTTCGTGCGCACCACA 61.027 57.895 33.23 15.79 44.91 4.17
3701 3924 1.687494 GAGATCTTCGTGCGCACCAC 61.687 60.000 33.23 17.57 41.15 4.16
3702 3925 1.446099 GAGATCTTCGTGCGCACCA 60.446 57.895 33.23 20.50 0.00 4.17
3703 3926 1.142778 GAGAGATCTTCGTGCGCACC 61.143 60.000 33.23 18.62 0.00 5.01
3704 3927 1.142778 GGAGAGATCTTCGTGCGCAC 61.143 60.000 30.42 30.42 0.00 5.34
3705 3928 1.139734 GGAGAGATCTTCGTGCGCA 59.860 57.895 5.66 5.66 0.00 6.09
3706 3929 0.593773 GAGGAGAGATCTTCGTGCGC 60.594 60.000 0.00 0.00 0.00 6.09
3707 3930 0.030101 GGAGGAGAGATCTTCGTGCG 59.970 60.000 0.00 0.00 0.00 5.34
3708 3931 0.387565 GGGAGGAGAGATCTTCGTGC 59.612 60.000 0.00 3.93 0.00 5.34
3709 3932 1.036707 GGGGAGGAGAGATCTTCGTG 58.963 60.000 0.00 0.00 0.00 4.35
3710 3933 0.105913 GGGGGAGGAGAGATCTTCGT 60.106 60.000 0.00 0.00 0.00 3.85
3711 3934 0.187361 AGGGGGAGGAGAGATCTTCG 59.813 60.000 0.00 0.00 0.00 3.79
3712 3935 2.821625 GCTAGGGGGAGGAGAGATCTTC 60.822 59.091 0.00 0.00 0.00 2.87
3713 3936 1.149077 GCTAGGGGGAGGAGAGATCTT 59.851 57.143 0.00 0.00 0.00 2.40
3714 3937 0.783850 GCTAGGGGGAGGAGAGATCT 59.216 60.000 0.00 0.00 0.00 2.75
3715 3938 0.783850 AGCTAGGGGGAGGAGAGATC 59.216 60.000 0.00 0.00 0.00 2.75
3716 3939 0.783850 GAGCTAGGGGGAGGAGAGAT 59.216 60.000 0.00 0.00 0.00 2.75
3717 3940 0.627768 TGAGCTAGGGGGAGGAGAGA 60.628 60.000 0.00 0.00 0.00 3.10
3718 3941 0.469144 GTGAGCTAGGGGGAGGAGAG 60.469 65.000 0.00 0.00 0.00 3.20
3719 3942 1.621377 GTGAGCTAGGGGGAGGAGA 59.379 63.158 0.00 0.00 0.00 3.71
3720 3943 1.830408 CGTGAGCTAGGGGGAGGAG 60.830 68.421 0.00 0.00 0.00 3.69
3721 3944 2.279073 CGTGAGCTAGGGGGAGGA 59.721 66.667 0.00 0.00 0.00 3.71
3733 3956 3.681417 TGAAATTGTGATGAGAGCGTGAG 59.319 43.478 0.00 0.00 0.00 3.51
3734 3957 3.663025 TGAAATTGTGATGAGAGCGTGA 58.337 40.909 0.00 0.00 0.00 4.35
3735 3958 4.408993 TTGAAATTGTGATGAGAGCGTG 57.591 40.909 0.00 0.00 0.00 5.34
3736 3959 4.614535 GCTTTGAAATTGTGATGAGAGCGT 60.615 41.667 0.00 0.00 0.00 5.07
3737 3960 3.850273 GCTTTGAAATTGTGATGAGAGCG 59.150 43.478 0.00 0.00 0.00 5.03
3738 3961 5.056894 AGCTTTGAAATTGTGATGAGAGC 57.943 39.130 0.00 0.00 0.00 4.09
3739 3962 6.250344 TGAGCTTTGAAATTGTGATGAGAG 57.750 37.500 0.00 0.00 0.00 3.20
3740 3963 5.335426 GCTGAGCTTTGAAATTGTGATGAGA 60.335 40.000 0.00 0.00 0.00 3.27
3741 3964 4.857588 GCTGAGCTTTGAAATTGTGATGAG 59.142 41.667 0.00 0.00 0.00 2.90
3742 3965 4.278919 TGCTGAGCTTTGAAATTGTGATGA 59.721 37.500 5.83 0.00 0.00 2.92
3743 3966 4.384846 GTGCTGAGCTTTGAAATTGTGATG 59.615 41.667 5.83 0.00 0.00 3.07
3744 3967 4.553323 GTGCTGAGCTTTGAAATTGTGAT 58.447 39.130 5.83 0.00 0.00 3.06
3745 3968 3.548616 CGTGCTGAGCTTTGAAATTGTGA 60.549 43.478 5.83 0.00 0.00 3.58
3746 3969 2.722629 CGTGCTGAGCTTTGAAATTGTG 59.277 45.455 5.83 0.00 0.00 3.33
3747 3970 2.358898 ACGTGCTGAGCTTTGAAATTGT 59.641 40.909 5.83 0.00 0.00 2.71
3748 3971 2.975851 GACGTGCTGAGCTTTGAAATTG 59.024 45.455 5.83 0.00 0.00 2.32
3749 3972 2.349817 CGACGTGCTGAGCTTTGAAATT 60.350 45.455 5.83 0.00 0.00 1.82
3750 3973 1.195448 CGACGTGCTGAGCTTTGAAAT 59.805 47.619 5.83 0.00 0.00 2.17
3751 3974 0.581529 CGACGTGCTGAGCTTTGAAA 59.418 50.000 5.83 0.00 0.00 2.69
3752 3975 0.249280 TCGACGTGCTGAGCTTTGAA 60.249 50.000 5.83 0.00 0.00 2.69
3753 3976 0.249280 TTCGACGTGCTGAGCTTTGA 60.249 50.000 5.83 0.00 0.00 2.69
3754 3977 0.111089 GTTCGACGTGCTGAGCTTTG 60.111 55.000 5.83 0.00 0.00 2.77
3755 3978 0.249489 AGTTCGACGTGCTGAGCTTT 60.249 50.000 5.83 0.00 0.00 3.51
3756 3979 0.664767 GAGTTCGACGTGCTGAGCTT 60.665 55.000 5.83 0.00 0.00 3.74
3757 3980 1.081108 GAGTTCGACGTGCTGAGCT 60.081 57.895 5.83 0.00 0.00 4.09
3758 3981 2.429351 CGAGTTCGACGTGCTGAGC 61.429 63.158 0.00 0.00 43.02 4.26
3759 3982 2.429351 GCGAGTTCGACGTGCTGAG 61.429 63.158 5.60 0.00 43.02 3.35
3760 3983 2.428569 GCGAGTTCGACGTGCTGA 60.429 61.111 5.60 0.00 43.02 4.26
3761 3984 2.710971 CTGCGAGTTCGACGTGCTG 61.711 63.158 5.60 0.00 43.02 4.41
3762 3985 2.402282 TTCTGCGAGTTCGACGTGCT 62.402 55.000 5.60 0.00 43.02 4.40
3763 3986 2.014554 TTCTGCGAGTTCGACGTGC 61.015 57.895 5.60 0.00 43.02 5.34
3764 3987 0.933047 TGTTCTGCGAGTTCGACGTG 60.933 55.000 5.60 0.00 43.02 4.49
3765 3988 0.248743 TTGTTCTGCGAGTTCGACGT 60.249 50.000 5.60 0.00 43.02 4.34
3766 3989 0.850217 TTTGTTCTGCGAGTTCGACG 59.150 50.000 5.60 0.00 43.02 5.12
3767 3990 1.192534 CCTTTGTTCTGCGAGTTCGAC 59.807 52.381 5.60 0.00 43.02 4.20
3768 3991 1.067974 TCCTTTGTTCTGCGAGTTCGA 59.932 47.619 5.60 0.00 43.02 3.71
3769 3992 1.192534 GTCCTTTGTTCTGCGAGTTCG 59.807 52.381 0.00 0.00 43.27 3.95
3770 3993 2.032808 GTGTCCTTTGTTCTGCGAGTTC 60.033 50.000 0.00 0.00 0.00 3.01
3771 3994 1.940613 GTGTCCTTTGTTCTGCGAGTT 59.059 47.619 0.00 0.00 0.00 3.01
3772 3995 1.134521 TGTGTCCTTTGTTCTGCGAGT 60.135 47.619 0.00 0.00 0.00 4.18
3773 3996 1.581934 TGTGTCCTTTGTTCTGCGAG 58.418 50.000 0.00 0.00 0.00 5.03
3774 3997 1.872952 CATGTGTCCTTTGTTCTGCGA 59.127 47.619 0.00 0.00 0.00 5.10
3775 3998 1.069022 CCATGTGTCCTTTGTTCTGCG 60.069 52.381 0.00 0.00 0.00 5.18
3776 3999 1.336240 GCCATGTGTCCTTTGTTCTGC 60.336 52.381 0.00 0.00 0.00 4.26
3777 4000 2.233271 AGCCATGTGTCCTTTGTTCTG 58.767 47.619 0.00 0.00 0.00 3.02
3778 4001 2.664402 AGCCATGTGTCCTTTGTTCT 57.336 45.000 0.00 0.00 0.00 3.01
3779 4002 6.699575 ATATAAGCCATGTGTCCTTTGTTC 57.300 37.500 0.00 0.00 0.00 3.18
3780 4003 6.127366 CCAATATAAGCCATGTGTCCTTTGTT 60.127 38.462 0.00 0.00 0.00 2.83
3781 4004 5.360714 CCAATATAAGCCATGTGTCCTTTGT 59.639 40.000 0.00 0.00 0.00 2.83
3782 4005 5.360714 ACCAATATAAGCCATGTGTCCTTTG 59.639 40.000 0.00 0.00 0.00 2.77
3783 4006 5.518865 ACCAATATAAGCCATGTGTCCTTT 58.481 37.500 0.00 0.00 0.00 3.11
3784 4007 5.129368 ACCAATATAAGCCATGTGTCCTT 57.871 39.130 0.00 0.00 0.00 3.36
3785 4008 4.796110 ACCAATATAAGCCATGTGTCCT 57.204 40.909 0.00 0.00 0.00 3.85
3786 4009 4.278419 GGAACCAATATAAGCCATGTGTCC 59.722 45.833 0.00 0.00 0.00 4.02
3787 4010 4.024048 CGGAACCAATATAAGCCATGTGTC 60.024 45.833 0.00 0.00 0.00 3.67
3788 4011 3.882888 CGGAACCAATATAAGCCATGTGT 59.117 43.478 0.00 0.00 0.00 3.72
3789 4012 3.253188 CCGGAACCAATATAAGCCATGTG 59.747 47.826 0.00 0.00 0.00 3.21
3790 4013 3.117663 ACCGGAACCAATATAAGCCATGT 60.118 43.478 9.46 0.00 0.00 3.21
3791 4014 3.486383 ACCGGAACCAATATAAGCCATG 58.514 45.455 9.46 0.00 0.00 3.66
3792 4015 3.137544 TGACCGGAACCAATATAAGCCAT 59.862 43.478 9.46 0.00 0.00 4.40
3793 4016 2.506231 TGACCGGAACCAATATAAGCCA 59.494 45.455 9.46 0.00 0.00 4.75
3794 4017 3.202829 TGACCGGAACCAATATAAGCC 57.797 47.619 9.46 0.00 0.00 4.35
3795 4018 3.432252 CGATGACCGGAACCAATATAAGC 59.568 47.826 9.46 0.00 33.91 3.09
3796 4019 4.878439 TCGATGACCGGAACCAATATAAG 58.122 43.478 9.46 0.00 39.14 1.73
3797 4020 4.940905 TCGATGACCGGAACCAATATAA 57.059 40.909 9.46 0.00 39.14 0.98
3798 4021 4.816392 CATCGATGACCGGAACCAATATA 58.184 43.478 21.02 0.00 39.14 0.86
3799 4022 3.664107 CATCGATGACCGGAACCAATAT 58.336 45.455 21.02 0.00 39.14 1.28
3800 4023 2.805295 GCATCGATGACCGGAACCAATA 60.805 50.000 29.20 0.00 39.14 1.90
3801 4024 1.953559 CATCGATGACCGGAACCAAT 58.046 50.000 21.02 0.00 39.14 3.16
3802 4025 0.742990 GCATCGATGACCGGAACCAA 60.743 55.000 29.20 0.00 39.14 3.67
3803 4026 1.153449 GCATCGATGACCGGAACCA 60.153 57.895 29.20 2.98 39.14 3.67
3804 4027 2.237751 CGCATCGATGACCGGAACC 61.238 63.158 29.20 7.42 39.14 3.62
3805 4028 2.237751 CCGCATCGATGACCGGAAC 61.238 63.158 29.57 11.58 43.20 3.62
3806 4029 2.106131 CCGCATCGATGACCGGAA 59.894 61.111 29.57 0.00 43.20 4.30
3807 4030 3.144871 ACCGCATCGATGACCGGA 61.145 61.111 35.76 0.00 43.20 5.14
3808 4031 2.344521 TACACCGCATCGATGACCGG 62.345 60.000 30.72 30.72 45.80 5.28
3809 4032 0.526739 TTACACCGCATCGATGACCG 60.527 55.000 29.20 21.68 40.25 4.79
3810 4033 1.865865 ATTACACCGCATCGATGACC 58.134 50.000 29.20 11.12 0.00 4.02
3811 4034 2.729882 GGTATTACACCGCATCGATGAC 59.270 50.000 29.20 17.94 37.63 3.06
3812 4035 3.021269 GGTATTACACCGCATCGATGA 57.979 47.619 29.20 6.37 37.63 2.92
3822 4045 5.416947 CACACTGAAGTAGGGTATTACACC 58.583 45.833 0.00 0.00 42.52 4.16
3823 4046 5.046807 ACCACACTGAAGTAGGGTATTACAC 60.047 44.000 3.98 0.00 42.52 2.90
3824 4047 5.046878 CACCACACTGAAGTAGGGTATTACA 60.047 44.000 5.24 0.00 42.52 2.41
3825 4048 5.046807 ACACCACACTGAAGTAGGGTATTAC 60.047 44.000 5.24 0.00 42.52 1.89
3826 4049 5.046878 CACACCACACTGAAGTAGGGTATTA 60.047 44.000 5.24 0.00 42.52 0.98
3827 4050 3.908103 ACACCACACTGAAGTAGGGTATT 59.092 43.478 5.24 0.00 42.52 1.89
3828 4051 3.260884 CACACCACACTGAAGTAGGGTAT 59.739 47.826 5.24 0.00 42.52 2.73
3829 4052 2.631062 CACACCACACTGAAGTAGGGTA 59.369 50.000 5.24 0.00 42.52 3.69
3830 4053 1.416401 CACACCACACTGAAGTAGGGT 59.584 52.381 6.20 3.53 46.36 4.34
3831 4054 1.270839 CCACACCACACTGAAGTAGGG 60.271 57.143 6.20 3.00 35.29 3.53
3832 4055 1.416401 ACCACACCACACTGAAGTAGG 59.584 52.381 0.83 0.83 0.00 3.18
3833 4056 2.483876 CACCACACCACACTGAAGTAG 58.516 52.381 0.00 0.00 0.00 2.57
3834 4057 1.140052 CCACCACACCACACTGAAGTA 59.860 52.381 0.00 0.00 0.00 2.24
3835 4058 0.107214 CCACCACACCACACTGAAGT 60.107 55.000 0.00 0.00 0.00 3.01
3836 4059 0.180171 TCCACCACACCACACTGAAG 59.820 55.000 0.00 0.00 0.00 3.02
3837 4060 0.843309 ATCCACCACACCACACTGAA 59.157 50.000 0.00 0.00 0.00 3.02
3838 4061 0.843309 AATCCACCACACCACACTGA 59.157 50.000 0.00 0.00 0.00 3.41
3839 4062 0.953727 CAATCCACCACACCACACTG 59.046 55.000 0.00 0.00 0.00 3.66
3840 4063 0.823356 GCAATCCACCACACCACACT 60.823 55.000 0.00 0.00 0.00 3.55
3841 4064 0.823356 AGCAATCCACCACACCACAC 60.823 55.000 0.00 0.00 0.00 3.82
3842 4065 0.106268 AAGCAATCCACCACACCACA 60.106 50.000 0.00 0.00 0.00 4.17
3843 4066 0.598065 GAAGCAATCCACCACACCAC 59.402 55.000 0.00 0.00 0.00 4.16
3844 4067 0.478072 AGAAGCAATCCACCACACCA 59.522 50.000 0.00 0.00 0.00 4.17
3845 4068 1.270550 CAAGAAGCAATCCACCACACC 59.729 52.381 0.00 0.00 0.00 4.16
3846 4069 1.270550 CCAAGAAGCAATCCACCACAC 59.729 52.381 0.00 0.00 0.00 3.82
3847 4070 1.619654 CCAAGAAGCAATCCACCACA 58.380 50.000 0.00 0.00 0.00 4.17
3848 4071 0.890683 CCCAAGAAGCAATCCACCAC 59.109 55.000 0.00 0.00 0.00 4.16
3849 4072 0.899717 GCCCAAGAAGCAATCCACCA 60.900 55.000 0.00 0.00 0.00 4.17
3850 4073 0.613012 AGCCCAAGAAGCAATCCACC 60.613 55.000 0.00 0.00 0.00 4.61
3851 4074 0.529378 CAGCCCAAGAAGCAATCCAC 59.471 55.000 0.00 0.00 0.00 4.02
3852 4075 0.405198 TCAGCCCAAGAAGCAATCCA 59.595 50.000 0.00 0.00 0.00 3.41
3853 4076 1.101331 CTCAGCCCAAGAAGCAATCC 58.899 55.000 0.00 0.00 0.00 3.01
3854 4077 1.101331 CCTCAGCCCAAGAAGCAATC 58.899 55.000 0.00 0.00 0.00 2.67
3855 4078 0.700564 TCCTCAGCCCAAGAAGCAAT 59.299 50.000 0.00 0.00 0.00 3.56
3856 4079 0.700564 ATCCTCAGCCCAAGAAGCAA 59.299 50.000 0.00 0.00 0.00 3.91
3857 4080 0.034767 CATCCTCAGCCCAAGAAGCA 60.035 55.000 0.00 0.00 0.00 3.91
3858 4081 0.254178 TCATCCTCAGCCCAAGAAGC 59.746 55.000 0.00 0.00 0.00 3.86
3859 4082 2.363683 GTTCATCCTCAGCCCAAGAAG 58.636 52.381 0.00 0.00 0.00 2.85
3860 4083 1.339055 CGTTCATCCTCAGCCCAAGAA 60.339 52.381 0.00 0.00 0.00 2.52
3861 4084 0.250234 CGTTCATCCTCAGCCCAAGA 59.750 55.000 0.00 0.00 0.00 3.02
3862 4085 0.250234 TCGTTCATCCTCAGCCCAAG 59.750 55.000 0.00 0.00 0.00 3.61
3863 4086 0.250234 CTCGTTCATCCTCAGCCCAA 59.750 55.000 0.00 0.00 0.00 4.12
3864 4087 0.904865 ACTCGTTCATCCTCAGCCCA 60.905 55.000 0.00 0.00 0.00 5.36
3865 4088 1.112113 TACTCGTTCATCCTCAGCCC 58.888 55.000 0.00 0.00 0.00 5.19
3866 4089 1.476891 TGTACTCGTTCATCCTCAGCC 59.523 52.381 0.00 0.00 0.00 4.85
3867 4090 2.941453 TGTACTCGTTCATCCTCAGC 57.059 50.000 0.00 0.00 0.00 4.26
3868 4091 4.396478 TCTCTTGTACTCGTTCATCCTCAG 59.604 45.833 0.00 0.00 0.00 3.35
3869 4092 4.332828 TCTCTTGTACTCGTTCATCCTCA 58.667 43.478 0.00 0.00 0.00 3.86
3870 4093 4.966965 TCTCTTGTACTCGTTCATCCTC 57.033 45.455 0.00 0.00 0.00 3.71
3871 4094 5.010933 TCTTCTCTTGTACTCGTTCATCCT 58.989 41.667 0.00 0.00 0.00 3.24
3872 4095 5.312120 TCTTCTCTTGTACTCGTTCATCC 57.688 43.478 0.00 0.00 0.00 3.51
3873 4096 6.150318 TGTTCTTCTCTTGTACTCGTTCATC 58.850 40.000 0.00 0.00 0.00 2.92
3874 4097 6.085555 TGTTCTTCTCTTGTACTCGTTCAT 57.914 37.500 0.00 0.00 0.00 2.57
3875 4098 5.509716 TGTTCTTCTCTTGTACTCGTTCA 57.490 39.130 0.00 0.00 0.00 3.18
3876 4099 5.175308 GGTTGTTCTTCTCTTGTACTCGTTC 59.825 44.000 0.00 0.00 0.00 3.95
3877 4100 5.048507 GGTTGTTCTTCTCTTGTACTCGTT 58.951 41.667 0.00 0.00 0.00 3.85
3878 4101 4.341520 AGGTTGTTCTTCTCTTGTACTCGT 59.658 41.667 0.00 0.00 0.00 4.18
3879 4102 4.872664 AGGTTGTTCTTCTCTTGTACTCG 58.127 43.478 0.00 0.00 0.00 4.18
3880 4103 6.772770 GAAGGTTGTTCTTCTCTTGTACTC 57.227 41.667 0.00 0.00 39.84 2.59
3890 4113 4.562552 CCTCTCCTCAGAAGGTTGTTCTTC 60.563 50.000 0.00 0.00 43.82 2.87
3891 4114 3.326297 CCTCTCCTCAGAAGGTTGTTCTT 59.674 47.826 0.00 0.00 43.82 2.52
3892 4115 2.903135 CCTCTCCTCAGAAGGTTGTTCT 59.097 50.000 0.00 0.00 43.82 3.01
3893 4116 2.635427 ACCTCTCCTCAGAAGGTTGTTC 59.365 50.000 0.00 0.00 43.82 3.18
3894 4117 2.370189 CACCTCTCCTCAGAAGGTTGTT 59.630 50.000 0.00 0.00 43.82 2.83
3895 4118 1.974236 CACCTCTCCTCAGAAGGTTGT 59.026 52.381 0.00 0.00 43.82 3.32
3896 4119 1.974236 ACACCTCTCCTCAGAAGGTTG 59.026 52.381 0.00 0.00 43.82 3.77
3897 4120 2.252714 GACACCTCTCCTCAGAAGGTT 58.747 52.381 0.00 0.00 43.82 3.50
3898 4121 1.551329 GGACACCTCTCCTCAGAAGGT 60.551 57.143 0.00 0.00 43.82 3.50
3899 4122 1.190643 GGACACCTCTCCTCAGAAGG 58.809 60.000 0.00 0.00 44.89 3.46
3900 4123 2.230130 AGGACACCTCTCCTCAGAAG 57.770 55.000 0.00 0.00 35.56 2.85
3901 4124 2.158310 TCAAGGACACCTCTCCTCAGAA 60.158 50.000 0.00 0.00 40.04 3.02
3902 4125 1.429299 TCAAGGACACCTCTCCTCAGA 59.571 52.381 0.00 0.00 40.04 3.27
3903 4126 1.824230 CTCAAGGACACCTCTCCTCAG 59.176 57.143 0.00 0.00 40.04 3.35
3904 4127 1.930251 CTCAAGGACACCTCTCCTCA 58.070 55.000 0.00 0.00 40.04 3.86
3905 4128 0.534873 GCTCAAGGACACCTCTCCTC 59.465 60.000 0.00 0.00 40.04 3.71
3906 4129 0.116143 AGCTCAAGGACACCTCTCCT 59.884 55.000 0.00 0.00 43.08 3.69
3907 4130 0.534873 GAGCTCAAGGACACCTCTCC 59.465 60.000 9.40 0.00 30.89 3.71
3908 4131 0.172352 CGAGCTCAAGGACACCTCTC 59.828 60.000 15.40 0.00 30.89 3.20
3909 4132 1.254284 CCGAGCTCAAGGACACCTCT 61.254 60.000 15.40 0.00 30.89 3.69
3910 4133 1.216710 CCGAGCTCAAGGACACCTC 59.783 63.158 15.40 0.00 30.89 3.85
3911 4134 1.534235 ACCGAGCTCAAGGACACCT 60.534 57.895 15.40 0.00 33.87 4.00
3912 4135 1.374758 CACCGAGCTCAAGGACACC 60.375 63.158 15.40 0.00 0.00 4.16
3913 4136 0.389166 CTCACCGAGCTCAAGGACAC 60.389 60.000 15.40 0.00 0.00 3.67
3914 4137 1.967535 CTCACCGAGCTCAAGGACA 59.032 57.895 15.40 0.00 0.00 4.02
3915 4138 4.900154 CTCACCGAGCTCAAGGAC 57.100 61.111 15.40 0.00 0.00 3.85
3924 4147 0.532862 AACCACACAAGCTCACCGAG 60.533 55.000 0.00 0.00 0.00 4.63
3925 4148 0.813610 CAACCACACAAGCTCACCGA 60.814 55.000 0.00 0.00 0.00 4.69
3926 4149 1.648720 CAACCACACAAGCTCACCG 59.351 57.895 0.00 0.00 0.00 4.94
3927 4150 1.455383 CCCAACCACACAAGCTCACC 61.455 60.000 0.00 0.00 0.00 4.02
3928 4151 1.455383 CCCCAACCACACAAGCTCAC 61.455 60.000 0.00 0.00 0.00 3.51
3929 4152 1.152777 CCCCAACCACACAAGCTCA 60.153 57.895 0.00 0.00 0.00 4.26
3930 4153 0.251341 ATCCCCAACCACACAAGCTC 60.251 55.000 0.00 0.00 0.00 4.09
3931 4154 0.540365 CATCCCCAACCACACAAGCT 60.540 55.000 0.00 0.00 0.00 3.74
3932 4155 0.539438 TCATCCCCAACCACACAAGC 60.539 55.000 0.00 0.00 0.00 4.01
3933 4156 2.094675 GATCATCCCCAACCACACAAG 58.905 52.381 0.00 0.00 0.00 3.16
3934 4157 1.710244 AGATCATCCCCAACCACACAA 59.290 47.619 0.00 0.00 0.00 3.33
3935 4158 1.004628 CAGATCATCCCCAACCACACA 59.995 52.381 0.00 0.00 0.00 3.72
3936 4159 1.281867 TCAGATCATCCCCAACCACAC 59.718 52.381 0.00 0.00 0.00 3.82
3937 4160 1.667595 TCAGATCATCCCCAACCACA 58.332 50.000 0.00 0.00 0.00 4.17
3938 4161 2.806945 TTCAGATCATCCCCAACCAC 57.193 50.000 0.00 0.00 0.00 4.16
3939 4162 2.091720 CCATTCAGATCATCCCCAACCA 60.092 50.000 0.00 0.00 0.00 3.67
3940 4163 2.091665 ACCATTCAGATCATCCCCAACC 60.092 50.000 0.00 0.00 0.00 3.77
3941 4164 3.217626 GACCATTCAGATCATCCCCAAC 58.782 50.000 0.00 0.00 0.00 3.77
3942 4165 2.175499 GGACCATTCAGATCATCCCCAA 59.825 50.000 0.00 0.00 0.00 4.12
3943 4166 1.776667 GGACCATTCAGATCATCCCCA 59.223 52.381 0.00 0.00 0.00 4.96
3944 4167 1.271054 CGGACCATTCAGATCATCCCC 60.271 57.143 0.00 0.00 0.00 4.81
3945 4168 1.694150 TCGGACCATTCAGATCATCCC 59.306 52.381 0.00 0.00 0.00 3.85
3946 4169 2.630098 TCTCGGACCATTCAGATCATCC 59.370 50.000 0.00 0.00 0.00 3.51
3947 4170 4.493547 GATCTCGGACCATTCAGATCATC 58.506 47.826 12.01 0.00 40.66 2.92
3948 4171 3.260380 GGATCTCGGACCATTCAGATCAT 59.740 47.826 16.15 0.00 42.11 2.45
3949 4172 2.630098 GGATCTCGGACCATTCAGATCA 59.370 50.000 16.15 0.00 42.11 2.92
3950 4173 2.630098 TGGATCTCGGACCATTCAGATC 59.370 50.000 9.70 9.70 40.37 2.75
3951 4174 2.682594 TGGATCTCGGACCATTCAGAT 58.317 47.619 0.00 0.00 0.00 2.90
3952 4175 2.159179 TGGATCTCGGACCATTCAGA 57.841 50.000 0.00 0.00 0.00 3.27
3953 4176 2.432146 TCTTGGATCTCGGACCATTCAG 59.568 50.000 0.00 0.00 36.02 3.02
3954 4177 2.466846 TCTTGGATCTCGGACCATTCA 58.533 47.619 0.00 0.00 36.02 2.57
3955 4178 3.397482 CATCTTGGATCTCGGACCATTC 58.603 50.000 0.00 0.00 36.02 2.67
3956 4179 2.486191 GCATCTTGGATCTCGGACCATT 60.486 50.000 0.00 0.00 36.02 3.16
3957 4180 1.071385 GCATCTTGGATCTCGGACCAT 59.929 52.381 0.00 0.00 36.02 3.55
3958 4181 0.465705 GCATCTTGGATCTCGGACCA 59.534 55.000 0.00 0.00 0.00 4.02
3959 4182 0.755686 AGCATCTTGGATCTCGGACC 59.244 55.000 0.00 0.00 0.00 4.46
3960 4183 2.147436 GAGCATCTTGGATCTCGGAC 57.853 55.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.