>input_sequence_39995
--------------------------------------------------------------------------------
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------------------------------ATGAAGGCACCATCGCTTCTTGTTCAGTGTTTCCCTGGCTTGCTTCCAAG
CAAGGCCACTAGTTGTGTGCCGATTATATCAGAGAGGGATCTGCATCTACCATCACCAGCTGTTGAACTAATCCCTTCAA
AGGTAATACTTGTTTGATCATTCATACATGAAACCCCAAATGGCTATACTATTTTTGTTTTACAAAGGGCGTTCTGAACT
GTTGATTGGTAAAATAAAGTATGTCTTGAAT-TTTTTCAGAGTGCTCATCCTTACAAATATGCTGGAGAGAAGGTCGATG
TCCAAGGTCTTGATGTTTTCAAGGTGAATAGCTCATGCAAATTTCCTAATATTCCGGCTGGCACTAAATTTTGTGTCGTT
CCGCTAGTAATTGCTCGAACTTTTAAATTATTGATTCTAAATTTCAATGCATGGCTTCTTC-----TTTTGGTTCAGGGG
AAGGTCAGTGTAGCAGATATGATAGCCTTTTCCCCTTCTGAAGTAGCATCATCAAAGCATGATGGTAAGTTGGCCACTAC
ATATGCAATATTTCCTCCTTTG--------TATTTTAAAATGGAAAGCTTATTCATCATTGTGTTTCTTTTCTCAGGTAG
TCTCAAATATTGGGAGAGTTCCATCACTATTGTGAATATTATTAAGAATGAGATCCGTGATGGGCAGCTGAGCTTCAGGG
GCAAGCGAGTTCTAGAGGTAATTTCCCATTCTACAGATTTCATCTAAATGGTGCTCTGCTTTCTTACTAGGTGTCTGTTC
CTGATTTTGCTTCCATAGAAGCAGAATGTGTGCCACACAGTCTGGTATCCTGCATAAGACTAGTGTTAGGTGCTTAGGTT
ATTCCG--TTTTTTAGGGAAAAGTTATTTTGGGCTTGATATCTATGTACTCAAAGGAGCTGCTAAATTCACTGTCAACTA
----TACTACCC-------TAGCACTCATATATTTTCATACAGGACTCTCAGCCTGTACCATTTTTTTTTATTCTTAATG
CTTTCATGAATCATTAATTTATTTTGGCAATTTGTGCAGCTTGGATGTGGATCTGGCCTTGCTGGGATTTTTGCCTGCTT
GAAGGTGTGTCATCTCTCCATGGTTTATGGTGTTTATCTAAATTATTAACTTATTGTTTTGATAATAAATTTACGGTTCC
CTTCAATTTTGGAAA-TGCATGTTTGTACCTTCTCTTGTCATACTTCA---AGTGATGTACTGGTGTATTGATTTCTTGC
TTAAATGCCACTACAGGGTGCATCTATAGTTCACTTCCAGGACACAAATGCAGAAACCATAAGATGCAGAACAATGCCCA
ATGTGCTTGCGAATCTTGAGCAGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCGGTTACACCATCCAGACAGTTG
TTAGCTCCCGTTGTCCATTTCTATGCCGGGGAGTGGGATGAGCTCCCCACAATTCTCTCAGTTGTGCATCCACCTGCACA
ACCAACAAACCTTAGCTTCTCTGAGGATGATTTTATGGATGGCTGCAGTAGCCATGACGGAAGCAGTATAGTTGGTCAGG
ACCCCAGGCGATCGAGGAAGCTTTCTGGCAGCCGTGCATGGGAGAGGGCCAGCGAGACCGACCCAGCAGATGGAGGGTAC
GATGTAATTTTGATTTCTGAGATCCCTAATGCGGTGAACTCTCTAAGGAAGCTCTATGCCCTTATCACTAAGGTCAGTTC
CTCCCATCATCACCTTCTCATGTGTCATATGTTACCTTGTGCATGTAGCCGATGGAGCACGGTACGATTTACTTATTCCA
AGTATTTAACTGTGCATGTTACGCTTGCAGTGCCTACGCCCTCCTTATGGAGTCTTGTATGTGGCTTCAAAGAAGAACAT
GGTTGGTTCAAGCGGGGGCGCAAGGCAGCTTAAAAGTTTGATGGAGGAGGAAGGTGTCCTTGGTGGTCACTTCTTGACTG
AGATATCTGACCGGGAGATATGGAAGTTCTTTTTCAAGTAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2A_1_TraesCS2A01G349300
AACCGCGGATTCAGGGCCGGCGGAGGAGAGCGCGCCCCGCCGTTACTAGGATTTGTGCCCCCGCTCTCGCTCCGATCGAG
GAGGTAATCCCCGCTGCTCCCTTCGGTCGCCCCTCTCAGTTCAATTTCGTGGAGGACCCGTGGGGATTCCGTCGCTGTTC
TTCTTCTGCTCGTCTCGCGCCGTGATCCCACGGAAATTCAGTGAGATGTCGGTGCGCTTAGTTGGTTTCAGTTTCGGGGA
TTTGGATGTTGAGGAGCTCTGTGTTCTC-------------------CTCTGATGTGCGTTTTAGCCATAAACAAATTGT
AGTTTTGGTATTGCTAGCCAAAGCATTTCTGCAGGTTGCGTCTGCGGTTCAGGGGTCTAGCGATCTGTCAGGGCTCTGTG
CTTGAGCTGTAATTGGTAATCTTGCTGTCCCCGGAAGCTGAATCTGGATAGATTTAGTT---CTGCTGTTGCAGTACAAA
ATCTCAATTCTGGACG-AAGAAGTGGCGCAGAGGGAGCTAGCGTGGGTCGCTGTTATTGATTTCGTACTTGCAGTCCACC
CTTGTGGGCGGCTTCTTTGTCCCGGCGTTCTGCCATGGTCCACACTAGAGTTT-CGTGAAGGTGACAGATTTGCACAGGA
AGTCGATTTCCAGATTATTTTTTTCTATAAGCATGT-GTGTTCTGCCCACACTGGACATTTGGGGGACACTTTTAAGTAT
TTGGAAGTCTCACACTTCAAAGCTTAGG--TTTGCATCTCTGAAGAAAGGTGTGGAAACTTGGTTGCAGAATAAAGGAAG
TTGCATTTTGTTGGTTTATCT-TTCTCATTTGAGGGTAGGGATATAGGTGGTCCTTGAATAGTTTGGAGCCCGAAAGATC
TCAATCCATTAGTTAGTACATGGATGGGGCTTCCT--TTTTGTAGAACATAATGAGTTATGGTTTTTCACATGATTTTCG
TTCTGATGTAGCCAACTGTCTATTCTTCTGTCAAGGCATAACTTAATTTCAAT-TTTTGTTCTACAGTGC----------
-----------------------------AATGAAGGCACCATCGCTTCTTGTTCAGTGTTTCCCTGGCTTGCTTCCAAG
CAAGGCCACTAGTTGTGTGCCGATTATATCAGAGAGGGATCTGCATCTACCATCACCAGCTGTTGAACTAATCCCTTCAA
AGGTAATACTTGTTTGATCATTCATACATGAAACCCCAAATGGCTATACTATTTTTGTTTTACAAAGGGCGTTCTGAACT
GTTGATTGGTAAAATAAAGTATGTCTTGAAT-TTTTTCAGAGTGCTCATCCTTACAAATATGCTGGAGAGAAGGTCGATG
TCCAAGGTCTTGATGTTTTCAAGGTGAATAGCTCATGCAAATTTCCTAATATTCCGGCTGGCACTAAATTTTGTGTCGTT
CCGCTAGTAATTGCTCGAACTTTTAAATTATTGATTCTAAATTTCAATGCATGGCTTCTTC-----TTTTGGTTCAGGGG
AAGGTCAGTGTAGCAGATATGATAGCCTTTTCCCCTTCTGAAGTAGCATCATCAAAGCATGATGGTAAGTTGGCCACTAC
ATATGCAATATTTCCTCCTTTG--------TATTTTAAAATGGAAAGCTTATTCATCATTGTGTTTCTTTTCTCAGGTAG
TCTCAAATATTGGGAGAGTTCCATCACTATTGTGAATATTATTAAGAATGAGATCCGTGATGGGCAGCTGAGCTTCAGGG
GCAAGCGAGTTCTAGAGGTAATTTCCCATTCTACAGATTTCATCTAAATGGTGCTCTGCTTTCTTACTAGGTGTCTGTTC
CTGATTTTGCTTCCATAGAAGCAGAATGTGTGCCACACAGTCTGGTATCCTGCATAAGACTAGTGTTAGGTGCTTAGGTT
ATTCCG--TTTTTTAGGGAAAAGTTATTTTGGGCTTGATATCTATGTACTCAAAGGAGCTGCTAAATTCACTGTCAACTA
----TACTACCC-------TAGCACTCATATATTTTCATACAGGACTCTCAGCCTGTACCATTTTTTTTTATTCTTAATG
CTTTCATGAATCATTAATTTATTTTGGCAATTTGTGCAGCTTGGATGTGGATCTGGCCTTGCTGGGATTTTTGCCTGCTT
GAAGGTGTGTCATCTCTCCATGGTTTATGGTGTTTATCTAAATTATTAACTTATTGTTTTGATAATAAATTTACGGTTCC
CTTCAATTTTGGAAA-TGCATGTTTGTACCTTCTCTTGTCATACTTCA---AGTGATGTACTGGTGTATTGATTTCTTGC
TTAAATGCCACTACAGGGTGCATCTATAGTTCACTTCCAGGACACAAATGCAGAAACCATAAGATGCAGAACAATGCCCA
ATGTGCTTGCGAATCTTGAGCAGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCGGTTACACCATCCAGACAGTTG
TTAGCTCCCGTTGTCCATTTCTATGCCGGGGAGTGGGATGAGCTCCCCACAATTCTCTCAGTTGTGCATCCACCTGCACA
ACCAACAAACCTTAGCTTCTCTGAGGATGATTTTATGGATGGCTGCAGTAGCCATGACGGAAGCAGTATAGTTGGTCAGG
ACCCCAGGCGATCGAGGAAGCTTTCTGGCAGCCGTGCATGGGAGAGGGCCAGCGAGACCGACCCAGCAGATGGAGGGTAC
GATGTAATTTTGATTTCTGAGATCCCTAATGCGGTGAACTCTCTAAGGAAGCTCTATGCCCTTATCACTAAGGTCAGTTC
CTCCCATCATCACCTTCTCATGTGTCATATGTTACCTTGTGCATGTAGCCGATGGAGCACGGTACGATTTACTTATTCCA
AGTATTTAACTGTGCATGTTACGCTTGCAGTGCCTACGCCCTCCTTATGGAGTCTTGTATGTGGCTTCAAAGAAGAACAT
GGTTGGTTCAAGCGGGGGCGCAAGGCAGCTTAAAAGTTTGATGGAGGAGGAAGGTGTCCTTGGTGGTCACTTCTTGACTG
AGATATCTGACCGGGAGATATGGAAGTTCTTTTTCAAGTAAACCGGCAAATGTTGGGACTGAAAAAGATGATCCCGGCCA
TGGCCTCGTATACAAAAAGAATTCATTTGTCTACTCGCAGCGCTGTACATACCGCGAAGCTTAGTTCGATTAATTCTTTG
GTGATAGGTTCAAGTATGGGCCTCAGTTGTTAAACCTGCAAATGTGTTGGCATTTTAACCCTTCTGTAGATCTCCTATCT
CCTAGGTGACTGTATTGAGCTTTGCATACCGAATCTATGGTGCTGGCATATCACACCACGCTATCAGCAATATGTACAAA
TGGAAATGGTTACTGTACTTGCTTGTCGGTCTTACTTGAATCGTGTCTTGCTGAA-------------------------
--------------------------------------------------------------------------------
-----------ATCTGGTAGAGCTGGTCGTGTCTTTGTTTTGAGAGCTTGTTCTTTC-TTTAAGGATGAAATATTTTATT
ATACTAGTAGTTCAGATTTAAGGAAGCACAGCCTCAACAAAAGACTTGTCATGCGCATGCATAATTAAGCTAGGGATCTG
TCAGATCTGTTT-TTTTCTAAGGAAATTTGTTGGCTACACCATAAATCGGTACAATGATTTGAGTTCATGTCAACAAACC
CGATCTTCTCATGAATGATTTGAGTTTGTGTATCAGTATAGTGTATGATAGTGCAAGTGTTGCGTGTGTTTGCCATGAAC
TCTTATATGCG---AACAAAACAAATTTGGTAATACTCTGCCAGATTTCAGGTTTTGGCAAAACCCCTTAAGGTTCGAAC
TCTGTGGTGCGCACGAAGATCTCTCCTCCCCCTAGCTCACGCTCTCATCACAATTTCAAAGCTCAGCACGTCGAACTCGC
AGAACAAAGGACACATGGCTTATATTGGTTCCGGTCATCGATGCGGTGTAATACCCTACTTCAGTGTGGTGTGGTGGATT
GCTTCTTGGGCTGAGGATGAACGAGTACAAGAGAAGAACAACCTTCTGAGGAGAGGTGTCCTTGAGCTCGGTGAGCTTGT
GTGGTTGGGGATGATCTGAATGGTCCGAGATCCAAGATGCTC
>chr2D_1
AACCGCGGATTCAGGGCCGGCAGAGGAGAGCGCGCCTCGCCGTTGCTAGGATTTTTGCTCCCGCTCTCGCTCCGATCGAG
GAGGTAATCCCCGCTGCTC------GTCGCTCCTCTTAGTTCAATTTGGTAGAGGACCGGTGGGGATTCCGTTGCTGTTC
TTCGGTTGTTCGTCTCGCGGCGTGATCTGACGGAAATTTGGTGAGATGTCGCTGCGTTTAGTGGGTTTCAGTTCCGGGGA
TTTGGATGCTGAAGAGCTCTGTGCCCCCCGTCTTTGGATGACGACCTCTCTGATGTGCGTTTTAGCCATAAACAAATTGT
AGTTTTGGCTTTGCTAGCCAAAGCATTTCTTTAGGTTGCGTCTGCGGTTCAGGGGTCTAGCGATCTGTCAGGGCTCTGTG
CTTGAGCTGTAC-TGGTAATCTTGCCGTCCCCGGAAGCTGAATCTGGATAGATTTGGTTCTGCTGCTGTACTAGTACAAA
ATCTCAATTCTGGACCAAAGAAGTGGCGCAGA-GGAGCTAGCGTGGGTCACTGTTATTGATTTCGTACTTGCAGTCCACC
CTTGCGGGCGGCTTGTTTTATTCC-------CCCATGGTCCACACTAG--------------------------------
AGTCGATTTCCAGATTTTTGCTACAACCCATGTACTAGTGTTCTGCCCACACTCGACTTTTGGGGAGCACTTTTATGGAT
TTGGAAGTGGCACGCCTCAAACCTTTAGGATTTTTATCTCTGAAGAAAGGTGTGGAAACTTGGCTGCAGAATAGAGAAAG
TTCCATTTTGTTGGTTTACCTATTCTCATTTGAGAGTAGGGATCGA--TGGTCCTTGAATAGTTTGGAGCCCCAAAGATC
TCGATCCATTAGTTAGTACATGGATGGGGCTTCTT--TTTTGTTGGAAACAAAGAGTTATGTTTTTTCACATGATTTCCG
TTTTAATGTAGCCAATTGTCTATTCTTCTGTCAAGGCATAACTTAATTTCAATACTTTTTTATACAGAACTTTATTAACT
ACTGAAGATAACTGGTAGCAGCATAGCGGAATGAAGGCACCATCGCTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCAAG
CAAGGCCACTAGTTGTGTGCCGATTATATCAGAGAGGGATCTGCATCTACCATCACCAGCTGTTGAACTAATCCCTTCAA
AGGTAATACTTGTTTGATCGTTCATACATGGAACCCCAAATGGCTATGCTATTTGTGTTC-AAAGAGGGTCTTCTGAACT
ATTGA-TGGTAAAATAAAGTATGCCTTGAATCTTTTTCAGAGTGCTCATCCTTACAAATATGCTGGAGAGAAGGTCGATG
TCCAAGGTCTTGATGTTTTCAAGGTGAATAGCTCATGCAAATTCCCTAGTATTCTCCC-GGCACTAAATTTCAAATCATT
CTGCTAGTAATTACTCAAACATTTAAATTATTGATTCTAAATTTTAATGCATGTCTTTTT-----TTTTTGGTTCAGGGG
AAGGTCAGTGTAGCAGATATGATAGCCTTTTCCCCTTCTGAAGTAGCATCATCAAAGCATGATGGTAAGTTGACCACTAC
ATATGCAATATTTCCTCCTTTATGAA--TATATTTTTAAATGGAAAGCTTATTCATTATTGTGTTTCTTTTCTCAGGTAG
TCTCAAATATTGGGAGAGTTCCATCACTATCGTGAATATTATTAAGAATGAGATCCGTGATGGGCAGCTGAGCTTCAGGG
GCAAGCGAGTTCTAGAGGTAATTTCCCATTCTACAGATTTCATCTAAATGGTGCTCTGCTTTCTTACTAGGTGTCTGGTC
CTGATTTTGCTTCCATAGAAGCAGAGTGTGTGCCACATGGTCTGGTATCCTGCATAAGACTAGTGTTAGGTGCTTAGGTT
ATTTCG--TTTTTTAGGGAAAAGTTATTTTGAGCTTGATATCTATGTACTCAAGGGAGCTGCTAAATTCAGTGTCAACTA
TGCCTACTACCC-------TAGCAGTCATATATTTTCATACAGGACTATCAGCCTGTACC---TTTTTTATTTCTTAATG
CTTTCATGAATCATTAATTTATTTTGGCAATTGGTGCAGCTTGGATGTGGATCTGGCCTTGCTGGGATTTTTGCCTGCTT
GAAGGTGTGTCATCTCCCCATGGTTTATGGTGTTTGTCTAAATTATTAACTTATTGTTTTGATAATAAATTTACGGTTCC
CTTCAATTTTGGAAAATGCATGTTTGTACTTTCTCTTGTCATACTTCACCAAGTGATGTACATGTGTATTGAT-TCTTGC
TTAAATGCTACTACAGGGTGCATCTATAGTTCACTTCCAGGACACAAATGCAGAAACCATAAGATGCAGAACAATGCCCA
ATGTGCTTGCGAATCTTGAGCAGGCTCGGGACAGACAGAACAGACCATCAGAGAGCCCGGTTACACCATCCAGACAGTTG
TTAGCTCCCGTTGTCCATTTCTATGCCGGGGAGTGGGATGAGCTCCCCACAATTCTCTCAGTTGTGCATCCACCTGCACA
ACCAACAAACCTTAGCTTCTCTGAGGATGATTTTATGGATGGCTGCAGTAGCCATGACGGAAGCAGTATAGTTGGTCAGG
ACCCCAGGCGATCGAGGAAGCTTTCTGGCAGCCGTGCATGGGAGAGGGCCAGCGAGACCGACCCAGCAGATGGAGGGTAC
GATGTAATTTTGATTTCTGAGATCCCTAATGCGGTGAACTCTCTAAGGAAGCTCTATGCCCTTATCACTAAGGTCAGTTT
CTCCCATCATCACCTTCTCATGTGTCATATGTTTCCTCGTGCATGTAGCCGATGGAGCACAGTATGATTTACTTATTCCA
AGTATTTAACTGTGCATGTTACGCTTGCAGTGCCTACGCCCTCCTTATGGAGTCTTGTATGTGGCTTCAAAGAAGAACTT
GGTTGGCTCAAATGGCGGCGCAAGGCAGCTTAAAAGTTTGATGGAGGAGGAAGGTGTCCTTGGTGGTCACTTCTTGACTG
AGATATCTGACCGGGAGATATGGAAGTTCTTTTTCAAGTAAACCGGCAAATGTTGGAACTGAAAAAGATGATCCTGGCCA
TAGTGTCGTATACAAGAAAAATTCATTTGTCTACTCGCAGCGCTGTACATACCGCGAAGCTTAGTTCGATTAATTCTTTG
GTGATAGGTTCAAGTATGCGTCCCAGTTGTTAAACCTGCAAATGTGTTGGCATTTTAACCCTTTTGTAGATCTCCTATCT
CCTAGGTGACTGTTGAGCT-TTTGCATACCGAATCTATGGTGCTGGCATATCACAGCACGCTATCAGCAATATGTACAAA
TGGAAATGGTTACTGTACTTGCTTGTCGGTCTTACTTGAATCGTGTCT--------------------------------
--------------------------------------------------------------------------------
-------------------------GTCGTGTCTTTGTTTTGAGAGCTTGTTCTTTC-TTTAAGGTTGAAATATTTTATT
ATACCAGTAGTTCAGATTTAAGGAAGCACAATCTCAACAAAGGACTTATCATGCGCATGCATAATTAAGCGAGGGATCTG
TTAGAT---TTGTTTCTCTAAGGAAATCTGTTAGCTACAGTACACCAT-----AATGATTTGAGTTCATGTCAAGAAACC
CGATCCTCTCATGAATGCTTTGAGTTTGTGTATCAGTGTAGTGTATGATAGTGTGAGTGTTGCGTGTGTTTGCCTTGAAC
TCTTGCTACATGTCAACAAAACAAATTTGGTAATATCTACC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2B_3
--CCGCGGATTCAGGGGCGGTAGAGGAGAGCGCGCCTCGCCGTTACCAGGATTTTCGCCCCCGCCCTCGCTCCGATCGAG
GAGGTAATCCCCGCTGCTCCCTTCCGTCGCTCGGTCTTAATTGC------AGAGAACCAGTGGGGATTTTTCGTC--TTC
TTCTGTTGCTCGTCTCGCGGCGTGATCTGACGGAAATTCGGTGAGATGTCGGTGCGTCTGTTGGGTTTCAGTTTCGGGGA
TTTGGATGTTGAGGAGCTCTGTGCCCCCCTTA-TTGGATGACGACCTCTCTGATGTGCGTTTTAGCCATAAACAAATTGT
AGTTTTGGCTTTGTTTGCCAAAGCATTTCTGCAGGTCGCCTCTGCGGTTCAGGGGTCTAGCGATC----AGGGCTCTGTG
CTTGAGCTGTAC-TGGTAATCTTGCCGTCCCCGGAAGCTGAATCTGGATAGATTTGGTTCTGCTGTTGTA---GTACAAA
ATCTCAATTCTGGACCAAAGAAGTGGCGCAGA-GGAGCTAGCGTGGGTCGCTGTTATTGATTTCGTACTTGCAGTCCACC
CTTGTGGGCGGCTTCTTTTGTCCC-------GCCATGGTCCACACTAGAGTTTTCGTGAAGGTGACAGATTTGCACGGGA
AGTCGATTTCCAGATTTTTGCTACGAGCATG----TAGTGTTCTGTCCACACTGGACTTTTGGGGGGCACTTCTATGGAT
TTGGAAGTGGCACACTTCAAACCTTTAGGATTTTTATATCTGAAGGAAGGTGTGGAAACTTGGCTGCAGAATAGAGAAAG
TTCCATTTTGTTGGTTTACCTATTCTCATTTGAGAGTAGGGATCGA--TGGTCCTTGAATAGTTTGGAGCCCCAAAGATC
TCGATCCATTAGTTAGTGGATGGATGGGGCTTCTTTTTTTTGTTGAAAACAAAGAGTTATGTTTTTTCACATGATTTTCG
TTTTAATGTAGCCAATTGTCTATTCTTCTGTCAAGGCATAACTTCATTTCAATATTTTTTTCTACAGAACTTTATTAACT
ACTGAAGATAACTGGTAGC--------GGAATGAAGGCACCATCACTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCAAG
CAAGGCCACTAGTTGTGTGCCGATTATATCAGAGAGGGATCTGCATCTACCATCACCAGCTGTTGAACTAATCCCTTCAA
AGGTAATACTTGTTTGATTGTTCATACATGAAACCCCAAATGGCTATGTTATTTGTGTTC-AAAGAGGGTCTTCTGAACA
ATTGA-TGGTAAAATAAAGTATGCCTTGAATCTTTTTCAGAGTGCTCATCCTTACAAATATGCTGGAGAGAAGGTCGATG
TCCAAGGTCTTGATGTTTTCAAGGTGAATAGCTCATGCAAATTCCCTAGTATTCTGTCCAGCACTAAATTTCGTGTCGTT
CTGCTAGTAATTGCTCAAACATTTAAATTACTGATTCTAAATTTTAATGCATGTCTTTTTTTTCCTTTTTGGTTCAGGGG
AAGGTCAGTGTAGCAGATATGATAGCCTTTTCCCCTTCTGAAGTAGCATCATCAAAGCATGATGGTAAGTTGGCCACTAA
ATATGCAATATTTCCTCCTTTATGAGTGTATATTTTAAAATGGAAAGCTTATTCGTCATTGTGTTTCTTTTCTTAGGTAG
TCTCAAATATTGGGAGAGTTCCATCACTATTGTGAATATTATTAAGAATGAGATCCGTGATGGGCAGCTGAGCTTCAGGG
GCAAGCGAGTTCTAGAGGTAATTTCCCATTCTACAGATTTCATCTAAATGGTGCTATGCTTTCTTACTAGGTGTCAGGTC
CTGATTTTGCTTCCATAGAAGCAGAATGTGTGCCACACGGTCTGGTATCCTGCATAAGACTAGTATTAGGTGCTTAGGTT
ATTTCAGTTTTTTTAGGGAAAAGTTATTTTGGGCTTGATATCTATGTACTCAGAGGAGCTGTTAAATTCACTGTCAACTA
----TGCCTACTACCCTAATAGCAGTCATATATTTTCATACAGGACTCTCAGCCTGTACC---TTTTTTATTTCTTAAAG
GTTTCATAAATCATTAACTTATTTTGGCAATTGGTGCAGCTTGGATGTGGATCTGGCCTTGCTGGGATTTTTGCCTGCTT
GAAGGTGTGTCATCTCTCCATGGTTTATGGTGTTTATCTAAATTATTAACTTATTGTTTTAATAATAAATTTACGGTTCC
CTTCAATTTTGGAAAATGCATGTTTGTACCTTCTCTTGTCATACTTCACCAAGTGATGTACTGGTGTATTGATTTCTTGC
TTAAATGTGACTACAGGGTGCGTCTATAGTTCACTTCCAGGACACAAATGCAGAAACCATAAGATGCAGAACAATGCCCA
ATGTGCTTGCGAATCTTGAGCAGGCTCGGGACAGACAGAACAGACCATCAGAGAGCCCAGTTACACCATCCAGACAGTTG
TTAGCTCCCGTTGTCCATTTCTATGCCGGGGAGTGGGATGAGCTCCCCACAATTCTCTCAGTTGTGCATCCACCTGCACA
ACCAACAAACCTTAGCTTCTCTGAGGATGATTTTATGGATGGCTGCAGTAGCCATGACGGAAGCAGTATAGTTGGTCAGG
ACCCCAGGCGATCGAGGAAGCTTTCTGGCAGCCGTGCATGGGAGAGGGCCAGTGAGACTGACCCAGCAGATGGAGGATAC
GATGTAATTTTGATTTCTGAGATCCCTAATGCGGTGAACTCTCTAAGGAAGCTCTATGCCCTTATCACTAAGGTCAGTTC
CTCCCATCATCACCTTCTCATGTGTCATATGTTGACTCGTGCATGTAGCCGATGGAGCACAGTACGATTTACTTATTCCA
AGTATTTAACCGTGCATGTTACACTTGCAGTGCCTACGCCCTCCTTATGGAGTCTTGTATGTGGCTTCAAAGAAGAACTT
GGTTGGTTCAAACGGCGGCGCAAGGCAGCTTAAAAGTTTGATGGAGGAGGAAGGTGTCCTTGGTGGTCACTTCTTGACTG
AGATATCTGACCGGGAGATATGGAAGTTCTTTTTCAAGTAAACCGGCAAATGTTGGAGCTGAAAAAGATGATCCTGGCCA
TGGCCTCGTATACAAAAAGAATTCGTTTGTCTACTCGCAGCGCTGTACATACCGCGAAGCTTAGTTCGATTAATTCTTTG
GTGATAGGTCCAAGTATGCGTCTCAGTTGTTAAACCTGCAAATGTGTTGGCATTTTAACCCTTTTGTAGATCTCCTATCT
CCTAGGTAACTGTTGAGCT-TTTGCATACCGAATCTATGGTGCTGGCCTATCACAGCACGCTATCAGCAATATGTACAAA
TGGAAATGGTTACTGTACTTGCTTGTCGGTCTTACTTGAATCATGTCTGGCTGATACTCCCTCCGTCTGAAAAAACTTGT
CTCAAGTTTGTCCCTTAAATGAATGTATTTAGCACTAACTTGATGCTAGATACATTCATTTGAGGGACAAGCTTTTTCAA
ACGGAGGGAGTATCTGGTAGAGCTGGCCGTGTCTTTGTTTTGAGAGCTTGTTCTTCCTTTTAAGGAAGAAATATTTTATT
ATACTAGTAGTTCAGATATAAGGAAGCACAGCCTCAACAAAGGACTTGTCATGCGCATGCATAATTAAGCGAGGGATCTG
TTAGATCTGTTTTTTTTCTAAGGAAATTTGTTGGCTACACCATGAATCGGTACTATGATTTGAGTTCATGTCAACAAACC
CGATGCTCTTATGAGTTATTTGAGTTTGTGTATCAGTGTAATGTATGATAGTG--AGTGTTGCGTGTGTTTGCCTTGAAT
TCTTGCTATATGTCAACAA---AAATTTGGTAATATCTACC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
---------------------S--------------S-----------------S-------------------------
------------------------S-----S-----S----------S--S-------S-------------S-------
----SS-------------S-------SS----------S----------------S-----S-----------------
-----------------------SS-S-----------------------------------------------------
--------SS----------------------------------------------------------------------
-----------SS------------S-----------------------------S-------------SSS--------
---------------S----------------S-----------------------------------------------
------------------SSS--SSSSSSSS---------------------------------------------S---
----------------S--SS-SSSSSS---SSSS----------------------S--------S--------S-S--
--------SS-----------S---SS------SS----------------------------S---------S--S---
--S---------------S---------------S--------SS-SS------------------------S-------
--S------------------------------S---------S---S-S--S--------S------------------
--S-S----------S------------------------------------------S--------SS-----------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------S------S----SS-S-S----SS---------
S----S-----------------S--------------------------------------------------------
-------------------------------------------S----S-----S-S-S------------S--------
-S--------------S---S-----------------------S--------S---S--S-------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------S-----------------------------------------
---S----------------------------------------------------------------------------
------------------------S-----------------------------------SSS------SS---------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---S----------------------S-------------------
------------------------------------------------------------------------------S-
-----------S---S----------------------------------------------------------------
--------------------------------------------------------S-----------------S-----
--------------------------------------------------------------------------------
------------------S-S------------------------------------------S----------------
-------------SSS-SSS-----------------------------------S------------------------
------------------------------------------------S-----S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----------------------------S---------
-S------------------------------------------------------------------------------
-----S-------------------------------S---------------SS-------------------S-----
----SSSSSSS------------------------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_707
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CACACTGGACATTTGGGGGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2113
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TGTGCAGCTTGGATGTGGAT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_2061
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AGGACTCTCAGCCTGTACCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_3930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGCACGAAGATCTCTCCTCC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
