Multiple sequence alignment - TraesCS2A01G349100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G349100 chr2A 100.000 2648 0 0 1 2648 588246421 588243774 0.000000e+00 4891.0
1 TraesCS2A01G349100 chr2A 96.154 104 2 2 313 415 586070626 586070524 4.530000e-38 169.0
2 TraesCS2A01G349100 chr2A 92.593 54 4 0 2463 2516 477658505 477658452 7.860000e-11 78.7
3 TraesCS2A01G349100 chr2A 87.719 57 7 0 2463 2519 222873499 222873443 1.700000e-07 67.6
4 TraesCS2A01G349100 chr2D 91.346 1583 60 28 621 2155 445707555 445706002 0.000000e+00 2093.0
5 TraesCS2A01G349100 chr2D 87.305 449 29 12 156 599 445707975 445707550 3.060000e-134 488.0
6 TraesCS2A01G349100 chr2D 97.895 95 1 1 312 406 442447389 442447296 2.110000e-36 163.0
7 TraesCS2A01G349100 chr2D 91.525 59 3 2 24 82 445708042 445707986 2.180000e-11 80.5
8 TraesCS2A01G349100 chr2D 91.489 47 4 0 2465 2511 13637756 13637710 6.120000e-07 65.8
9 TraesCS2A01G349100 chr2B 90.226 1330 49 40 777 2076 524003483 524002205 0.000000e+00 1661.0
10 TraesCS2A01G349100 chr2B 84.925 398 41 14 375 765 524003934 524003549 4.130000e-103 385.0
11 TraesCS2A01G349100 chr2B 88.256 281 23 6 138 415 524004489 524004216 7.070000e-86 327.0
12 TraesCS2A01G349100 chr2B 88.382 241 15 9 314 546 524004171 524003936 7.220000e-71 278.0
13 TraesCS2A01G349100 chr2B 100.000 94 0 0 314 407 522073243 522073150 9.740000e-40 174.0
14 TraesCS2A01G349100 chr2B 95.370 108 3 2 306 412 522073106 522073000 1.260000e-38 171.0
15 TraesCS2A01G349100 chr2B 87.069 116 3 3 2154 2259 524002074 524001961 1.290000e-23 121.0
16 TraesCS2A01G349100 chr2B 91.228 57 5 0 2463 2519 71974613 71974669 7.860000e-11 78.7
17 TraesCS2A01G349100 chr5D 93.600 125 8 0 2524 2648 432040716 432040592 1.250000e-43 187.0
18 TraesCS2A01G349100 chr5D 96.907 97 1 1 307 401 126953672 126953768 7.590000e-36 161.0
19 TraesCS2A01G349100 chr5D 86.047 129 17 1 2518 2646 493817505 493817632 1.280000e-28 137.0
20 TraesCS2A01G349100 chr5D 87.500 120 12 1 2526 2645 532820740 532820856 4.600000e-28 135.0
21 TraesCS2A01G349100 chr7D 92.248 129 10 0 2518 2646 174830255 174830127 1.620000e-42 183.0
22 TraesCS2A01G349100 chr7D 91.589 107 9 0 2518 2624 230975138 230975032 5.910000e-32 148.0
23 TraesCS2A01G349100 chr7D 89.286 56 6 0 2464 2519 145578943 145578888 1.320000e-08 71.3
24 TraesCS2A01G349100 chr5A 100.000 85 0 0 312 396 142746864 142746948 9.810000e-35 158.0
25 TraesCS2A01G349100 chr6D 91.228 114 10 0 2518 2631 401623784 401623897 3.530000e-34 156.0
26 TraesCS2A01G349100 chr4B 89.516 124 12 1 2526 2648 379087473 379087596 3.530000e-34 156.0
27 TraesCS2A01G349100 chr5B 86.719 128 17 0 2518 2645 464360158 464360285 2.750000e-30 143.0
28 TraesCS2A01G349100 chr4A 86.047 129 18 0 2518 2646 535470990 535471118 3.550000e-29 139.0
29 TraesCS2A01G349100 chr6B 91.228 57 5 0 2463 2519 281145982 281145926 7.860000e-11 78.7
30 TraesCS2A01G349100 chr3D 90.164 61 5 1 2459 2519 545025507 545025448 7.860000e-11 78.7
31 TraesCS2A01G349100 chr3B 89.474 57 6 0 2463 2519 247710579 247710635 3.660000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G349100 chr2A 588243774 588246421 2647 True 4891.000000 4891 100.000000 1 2648 1 chr2A.!!$R4 2647
1 TraesCS2A01G349100 chr2D 445706002 445708042 2040 True 887.166667 2093 90.058667 24 2155 3 chr2D.!!$R3 2131
2 TraesCS2A01G349100 chr2B 524001961 524004489 2528 True 554.400000 1661 87.771600 138 2259 5 chr2B.!!$R2 2121

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.035458 TCCACACACACACACACACA 59.965 50.0 0.00 0.0 0.00 3.72 F
955 1340 0.108615 CCCAACTCAACTCGAGCGAT 60.109 55.0 13.61 0.0 46.63 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1391 1779 0.531200 GTCCGACGAATCCTTCTGGT 59.469 55.0 0.00 0.00 34.23 4.0 R
2377 2890 0.032267 CTTAGAATCGGTCCGGGCTC 59.968 60.0 12.29 5.78 0.00 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.855159 ATTTTCCGAACGGAGGGAG 57.145 52.632 15.34 0.00 46.06 4.30
19 20 0.981943 ATTTTCCGAACGGAGGGAGT 59.018 50.000 15.34 1.75 46.06 3.85
20 21 1.631405 TTTTCCGAACGGAGGGAGTA 58.369 50.000 15.34 0.00 46.06 2.59
21 22 0.890683 TTTCCGAACGGAGGGAGTAC 59.109 55.000 15.34 0.00 46.06 2.73
22 23 0.251297 TTCCGAACGGAGGGAGTACA 60.251 55.000 15.34 0.00 46.06 2.90
35 36 5.130477 GGAGGGAGTACACCATATTTCAGAA 59.870 44.000 11.69 0.00 0.00 3.02
90 91 7.971368 AGTAGCTCTCCTCTTCTCTTATTTT 57.029 36.000 0.00 0.00 0.00 1.82
91 92 8.007405 AGTAGCTCTCCTCTTCTCTTATTTTC 57.993 38.462 0.00 0.00 0.00 2.29
92 93 6.233905 AGCTCTCCTCTTCTCTTATTTTCC 57.766 41.667 0.00 0.00 0.00 3.13
93 94 5.723887 AGCTCTCCTCTTCTCTTATTTTCCA 59.276 40.000 0.00 0.00 0.00 3.53
94 95 5.815222 GCTCTCCTCTTCTCTTATTTTCCAC 59.185 44.000 0.00 0.00 0.00 4.02
95 96 6.575254 GCTCTCCTCTTCTCTTATTTTCCACA 60.575 42.308 0.00 0.00 0.00 4.17
96 97 6.702329 TCTCCTCTTCTCTTATTTTCCACAC 58.298 40.000 0.00 0.00 0.00 3.82
97 98 6.270000 TCTCCTCTTCTCTTATTTTCCACACA 59.730 38.462 0.00 0.00 0.00 3.72
98 99 6.231211 TCCTCTTCTCTTATTTTCCACACAC 58.769 40.000 0.00 0.00 0.00 3.82
99 100 5.997746 CCTCTTCTCTTATTTTCCACACACA 59.002 40.000 0.00 0.00 0.00 3.72
100 101 6.073003 CCTCTTCTCTTATTTTCCACACACAC 60.073 42.308 0.00 0.00 0.00 3.82
101 102 6.353323 TCTTCTCTTATTTTCCACACACACA 58.647 36.000 0.00 0.00 0.00 3.72
102 103 6.260050 TCTTCTCTTATTTTCCACACACACAC 59.740 38.462 0.00 0.00 0.00 3.82
103 104 5.432645 TCTCTTATTTTCCACACACACACA 58.567 37.500 0.00 0.00 0.00 3.72
104 105 5.295787 TCTCTTATTTTCCACACACACACAC 59.704 40.000 0.00 0.00 0.00 3.82
105 106 4.944317 TCTTATTTTCCACACACACACACA 59.056 37.500 0.00 0.00 0.00 3.72
106 107 2.999507 TTTTCCACACACACACACAC 57.000 45.000 0.00 0.00 0.00 3.82
107 108 1.897560 TTTCCACACACACACACACA 58.102 45.000 0.00 0.00 0.00 3.72
108 109 1.160989 TTCCACACACACACACACAC 58.839 50.000 0.00 0.00 0.00 3.82
109 110 0.035458 TCCACACACACACACACACA 59.965 50.000 0.00 0.00 0.00 3.72
110 111 0.167908 CCACACACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
111 112 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
112 113 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
113 114 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
114 115 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
115 116 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
116 117 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
117 118 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
118 119 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
119 120 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
120 121 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
121 122 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
122 123 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
123 124 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
124 125 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
125 126 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
126 127 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
127 128 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
128 129 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
129 130 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
130 131 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
131 132 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
132 133 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
133 134 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
134 135 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
135 136 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
136 137 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
221 222 9.853555 CACAGACATTAAATAAAGTGCCATTTA 57.146 29.630 0.00 0.00 0.00 1.40
234 235 7.951530 AAGTGCCATTTAAATTTTGTCTCTG 57.048 32.000 0.00 0.00 0.00 3.35
272 274 7.520937 GCATGATCATATGTGAGTTGTGCAATA 60.521 37.037 8.15 0.00 37.87 1.90
531 861 5.536916 GTCCAGAGTAGCATGTTCCTATACT 59.463 44.000 0.00 0.00 0.00 2.12
548 878 6.099269 TCCTATACTTGGAACACATACTTCCC 59.901 42.308 0.00 0.00 39.29 3.97
550 880 1.737793 CTTGGAACACATACTTCCCGC 59.262 52.381 0.00 0.00 39.29 6.13
567 898 1.516208 CGCAAACGTATTTGTACCGC 58.484 50.000 2.19 0.00 45.97 5.68
606 937 1.722464 TGCGAGTCATACCGTTTTTCG 59.278 47.619 0.00 0.00 39.52 3.46
607 938 1.987770 GCGAGTCATACCGTTTTTCGA 59.012 47.619 0.00 0.00 42.86 3.71
616 947 6.204108 GTCATACCGTTTTTCGATGGGATATT 59.796 38.462 0.00 0.00 42.86 1.28
617 948 7.385752 GTCATACCGTTTTTCGATGGGATATTA 59.614 37.037 0.00 0.00 42.86 0.98
619 950 6.554334 ACCGTTTTTCGATGGGATATTATG 57.446 37.500 0.00 0.00 42.86 1.90
649 983 1.341383 ACAATGCTTCTAGGCAAGGGG 60.341 52.381 0.00 0.00 45.68 4.79
715 1049 2.185004 AGTCAAATCAAGACACGGGG 57.815 50.000 0.00 0.00 38.46 5.73
720 1054 3.505680 TCAAATCAAGACACGGGGAAATG 59.494 43.478 0.00 0.00 0.00 2.32
798 1183 6.456795 TCATCGACTGAACTCTTGACATAT 57.543 37.500 0.00 0.00 0.00 1.78
921 1306 3.591835 CGCCAACACCACCACCAC 61.592 66.667 0.00 0.00 0.00 4.16
922 1307 3.223589 GCCAACACCACCACCACC 61.224 66.667 0.00 0.00 0.00 4.61
925 1310 0.972983 CCAACACCACCACCACCAAA 60.973 55.000 0.00 0.00 0.00 3.28
931 1316 0.474184 CCACCACCACCAAACTCTCT 59.526 55.000 0.00 0.00 0.00 3.10
955 1340 0.108615 CCCAACTCAACTCGAGCGAT 60.109 55.000 13.61 0.00 46.63 4.58
956 1341 1.272781 CCAACTCAACTCGAGCGATC 58.727 55.000 13.61 0.00 46.63 3.69
957 1342 1.135257 CCAACTCAACTCGAGCGATCT 60.135 52.381 13.61 0.00 46.63 2.75
958 1343 2.600731 CAACTCAACTCGAGCGATCTT 58.399 47.619 13.61 0.00 46.63 2.40
1039 1427 0.757188 CTCCTACATCCCGACCAGCT 60.757 60.000 0.00 0.00 0.00 4.24
1056 1444 0.399806 GCTTCTCCTCCATCCTCCCT 60.400 60.000 0.00 0.00 0.00 4.20
1378 1766 1.516169 CGCACCATCATGTCGACGA 60.516 57.895 11.62 3.09 0.00 4.20
1566 1987 2.969238 CGCATGATCGGGCAGGTC 60.969 66.667 0.00 0.00 0.00 3.85
1653 2074 4.560856 GCGCTCGCCTGATCGACT 62.561 66.667 0.00 0.00 35.84 4.18
1716 2146 6.835819 TGGTAGCAGGTGTATGTAGATATC 57.164 41.667 0.00 0.00 0.00 1.63
1760 2190 1.002201 TGTAACCGCTCCCGAAATTCA 59.998 47.619 0.00 0.00 36.29 2.57
1910 2349 1.176838 GTTTTGTTCGTCGTGTGCAC 58.823 50.000 10.75 10.75 0.00 4.57
1950 2389 1.699656 CTTGGCGCCAGATTCTGTCG 61.700 60.000 30.75 12.47 35.89 4.35
1951 2390 2.125512 GGCGCCAGATTCTGTCGT 60.126 61.111 24.80 0.00 35.23 4.34
1952 2391 1.741770 GGCGCCAGATTCTGTCGTT 60.742 57.895 24.80 0.00 35.23 3.85
2020 2464 2.969016 CAGAGTCTCGCTGCTGGT 59.031 61.111 0.00 0.00 0.00 4.00
2086 2538 2.222027 CACCCAAGAGTTGAGTTGACC 58.778 52.381 0.00 0.00 0.00 4.02
2089 2541 0.868406 CAAGAGTTGAGTTGACCCGC 59.132 55.000 0.00 0.00 0.00 6.13
2128 2609 1.709147 GCATGTGACGATGGGCTCAC 61.709 60.000 0.00 0.00 37.83 3.51
2135 2616 2.423446 GATGGGCTCACCGGCTAG 59.577 66.667 0.00 0.00 44.64 3.42
2139 2620 4.577246 GGCTCACCGGCTAGCTCG 62.577 72.222 23.48 15.83 38.80 5.03
2161 2642 5.981315 TCGGACGAATTAGATATTTGTGTCC 59.019 40.000 0.00 0.00 39.89 4.02
2164 2645 7.210873 GGACGAATTAGATATTTGTGTCCTCT 58.789 38.462 0.00 0.00 40.09 3.69
2166 2647 8.012957 ACGAATTAGATATTTGTGTCCTCTCT 57.987 34.615 0.00 0.00 0.00 3.10
2169 2650 6.732896 TTAGATATTTGTGTCCTCTCTCCC 57.267 41.667 0.00 0.00 0.00 4.30
2170 2651 3.970640 AGATATTTGTGTCCTCTCTCCCC 59.029 47.826 0.00 0.00 0.00 4.81
2172 2653 3.491766 ATTTGTGTCCTCTCTCCCCTA 57.508 47.619 0.00 0.00 0.00 3.53
2173 2654 2.534042 TTGTGTCCTCTCTCCCCTAG 57.466 55.000 0.00 0.00 0.00 3.02
2259 2772 2.750237 GCGGCCCACCCAAGTAAG 60.750 66.667 0.00 0.00 0.00 2.34
2260 2773 2.045340 CGGCCCACCCAAGTAAGG 60.045 66.667 0.00 0.00 0.00 2.69
2261 2774 2.362503 GGCCCACCCAAGTAAGGC 60.363 66.667 0.00 0.00 41.71 4.35
2262 2775 2.362503 GCCCACCCAAGTAAGGCC 60.363 66.667 0.00 0.00 38.23 5.19
2263 2776 3.176297 CCCACCCAAGTAAGGCCA 58.824 61.111 5.01 0.00 0.00 5.36
2264 2777 1.697297 CCCACCCAAGTAAGGCCAT 59.303 57.895 5.01 0.00 0.00 4.40
2265 2778 0.395724 CCCACCCAAGTAAGGCCATC 60.396 60.000 5.01 0.00 0.00 3.51
2266 2779 0.625849 CCACCCAAGTAAGGCCATCT 59.374 55.000 5.01 0.00 0.00 2.90
2267 2780 1.005924 CCACCCAAGTAAGGCCATCTT 59.994 52.381 5.01 3.14 39.40 2.40
2268 2781 2.369394 CACCCAAGTAAGGCCATCTTC 58.631 52.381 5.01 0.00 36.93 2.87
2269 2782 1.992557 ACCCAAGTAAGGCCATCTTCA 59.007 47.619 5.01 0.00 36.93 3.02
2270 2783 2.378547 ACCCAAGTAAGGCCATCTTCAA 59.621 45.455 5.01 0.00 36.93 2.69
2271 2784 3.011708 ACCCAAGTAAGGCCATCTTCAAT 59.988 43.478 5.01 0.00 36.93 2.57
2272 2785 3.382546 CCCAAGTAAGGCCATCTTCAATG 59.617 47.826 5.01 0.00 36.93 2.82
2273 2786 3.181483 CCAAGTAAGGCCATCTTCAATGC 60.181 47.826 5.01 0.00 36.93 3.56
2274 2787 2.292267 AGTAAGGCCATCTTCAATGCG 58.708 47.619 5.01 0.00 36.93 4.73
2275 2788 1.334869 GTAAGGCCATCTTCAATGCGG 59.665 52.381 5.01 0.00 36.93 5.69
2276 2789 0.034186 AAGGCCATCTTCAATGCGGA 60.034 50.000 5.01 0.00 0.00 5.54
2277 2790 0.749454 AGGCCATCTTCAATGCGGAC 60.749 55.000 5.01 0.00 0.00 4.79
2278 2791 1.728490 GGCCATCTTCAATGCGGACC 61.728 60.000 0.00 0.00 0.00 4.46
2279 2792 1.728490 GCCATCTTCAATGCGGACCC 61.728 60.000 0.00 0.00 0.00 4.46
2280 2793 1.439353 CCATCTTCAATGCGGACCCG 61.439 60.000 3.73 3.73 43.09 5.28
2290 2803 4.935630 CGGACCCGCAAACTTTTC 57.064 55.556 0.00 0.00 0.00 2.29
2291 2804 1.082366 CGGACCCGCAAACTTTTCG 60.082 57.895 0.00 0.00 0.00 3.46
2292 2805 1.778027 CGGACCCGCAAACTTTTCGT 61.778 55.000 0.00 0.00 0.00 3.85
2293 2806 1.228533 GGACCCGCAAACTTTTCGTA 58.771 50.000 0.00 0.00 0.00 3.43
2294 2807 1.603326 GGACCCGCAAACTTTTCGTAA 59.397 47.619 0.00 0.00 0.00 3.18
2295 2808 2.602933 GGACCCGCAAACTTTTCGTAAC 60.603 50.000 0.00 0.00 0.00 2.50
2296 2809 2.288729 GACCCGCAAACTTTTCGTAACT 59.711 45.455 0.00 0.00 0.00 2.24
2297 2810 2.032426 ACCCGCAAACTTTTCGTAACTG 59.968 45.455 0.00 0.00 0.00 3.16
2298 2811 2.032426 CCCGCAAACTTTTCGTAACTGT 59.968 45.455 0.00 0.00 0.00 3.55
2299 2812 3.487879 CCCGCAAACTTTTCGTAACTGTT 60.488 43.478 0.00 0.00 0.00 3.16
2300 2813 3.722289 CCGCAAACTTTTCGTAACTGTTC 59.278 43.478 0.00 0.00 0.00 3.18
2301 2814 4.336101 CGCAAACTTTTCGTAACTGTTCA 58.664 39.130 0.00 0.00 0.00 3.18
2302 2815 4.433304 CGCAAACTTTTCGTAACTGTTCAG 59.567 41.667 0.00 0.00 0.00 3.02
2303 2816 4.204370 GCAAACTTTTCGTAACTGTTCAGC 59.796 41.667 0.00 0.00 0.00 4.26
2304 2817 5.328691 CAAACTTTTCGTAACTGTTCAGCA 58.671 37.500 0.00 0.00 0.00 4.41
2305 2818 4.531659 ACTTTTCGTAACTGTTCAGCAC 57.468 40.909 0.00 0.00 0.00 4.40
2306 2819 3.936453 ACTTTTCGTAACTGTTCAGCACA 59.064 39.130 0.00 0.00 0.00 4.57
2307 2820 3.936902 TTTCGTAACTGTTCAGCACAC 57.063 42.857 0.00 0.00 0.00 3.82
2308 2821 2.588027 TCGTAACTGTTCAGCACACA 57.412 45.000 0.00 0.00 0.00 3.72
2309 2822 3.106242 TCGTAACTGTTCAGCACACAT 57.894 42.857 0.00 0.00 0.00 3.21
2310 2823 2.799978 TCGTAACTGTTCAGCACACATG 59.200 45.455 0.00 0.00 0.00 3.21
2311 2824 2.543848 CGTAACTGTTCAGCACACATGT 59.456 45.455 0.00 0.00 0.00 3.21
2312 2825 3.002246 CGTAACTGTTCAGCACACATGTT 59.998 43.478 0.00 0.00 0.00 2.71
2313 2826 4.495679 CGTAACTGTTCAGCACACATGTTT 60.496 41.667 0.00 0.00 0.00 2.83
2314 2827 3.698029 ACTGTTCAGCACACATGTTTC 57.302 42.857 0.00 0.00 0.00 2.78
2315 2828 3.016031 ACTGTTCAGCACACATGTTTCA 58.984 40.909 0.00 0.00 0.00 2.69
2316 2829 3.633525 ACTGTTCAGCACACATGTTTCAT 59.366 39.130 0.00 0.00 0.00 2.57
2317 2830 4.098349 ACTGTTCAGCACACATGTTTCATT 59.902 37.500 0.00 0.00 0.00 2.57
2318 2831 4.361420 TGTTCAGCACACATGTTTCATTG 58.639 39.130 0.00 0.00 0.00 2.82
2319 2832 4.142204 TGTTCAGCACACATGTTTCATTGT 60.142 37.500 0.00 0.00 0.00 2.71
2320 2833 3.967401 TCAGCACACATGTTTCATTGTG 58.033 40.909 0.00 1.09 46.76 3.33
2326 2839 3.311106 CACATGTTTCATTGTGTGAGCC 58.689 45.455 0.00 0.00 43.41 4.70
2327 2840 2.030893 ACATGTTTCATTGTGTGAGCCG 60.031 45.455 0.00 0.00 38.29 5.52
2328 2841 0.950836 TGTTTCATTGTGTGAGCCGG 59.049 50.000 0.00 0.00 38.29 6.13
2329 2842 1.234821 GTTTCATTGTGTGAGCCGGA 58.765 50.000 5.05 0.00 38.29 5.14
2330 2843 1.812571 GTTTCATTGTGTGAGCCGGAT 59.187 47.619 5.05 0.00 38.29 4.18
2331 2844 1.452110 TTCATTGTGTGAGCCGGATG 58.548 50.000 5.05 0.00 38.29 3.51
2332 2845 1.026182 TCATTGTGTGAGCCGGATGC 61.026 55.000 5.05 0.00 41.71 3.91
2341 2854 4.445699 GCCGGATGCGATTTCTCT 57.554 55.556 8.71 0.00 0.00 3.10
2342 2855 2.695314 GCCGGATGCGATTTCTCTT 58.305 52.632 8.71 0.00 0.00 2.85
2343 2856 1.865865 GCCGGATGCGATTTCTCTTA 58.134 50.000 8.71 0.00 0.00 2.10
2344 2857 1.527311 GCCGGATGCGATTTCTCTTAC 59.473 52.381 8.71 0.00 0.00 2.34
2345 2858 2.821546 CCGGATGCGATTTCTCTTACA 58.178 47.619 8.71 0.00 0.00 2.41
2346 2859 3.194861 CCGGATGCGATTTCTCTTACAA 58.805 45.455 8.71 0.00 0.00 2.41
2347 2860 3.621268 CCGGATGCGATTTCTCTTACAAA 59.379 43.478 8.71 0.00 0.00 2.83
2348 2861 4.273480 CCGGATGCGATTTCTCTTACAAAT 59.727 41.667 8.71 0.00 0.00 2.32
2349 2862 5.435557 CGGATGCGATTTCTCTTACAAATC 58.564 41.667 0.00 0.00 37.04 2.17
2350 2863 5.006649 CGGATGCGATTTCTCTTACAAATCA 59.993 40.000 0.00 0.00 39.34 2.57
2351 2864 6.456853 CGGATGCGATTTCTCTTACAAATCAA 60.457 38.462 0.00 0.00 39.34 2.57
2352 2865 7.250569 GGATGCGATTTCTCTTACAAATCAAA 58.749 34.615 6.09 0.00 39.34 2.69
2353 2866 7.430502 GGATGCGATTTCTCTTACAAATCAAAG 59.569 37.037 6.09 0.00 39.34 2.77
2354 2867 7.433708 TGCGATTTCTCTTACAAATCAAAGA 57.566 32.000 6.09 0.00 39.34 2.52
2355 2868 7.298122 TGCGATTTCTCTTACAAATCAAAGAC 58.702 34.615 6.09 0.00 39.34 3.01
2356 2869 7.041440 TGCGATTTCTCTTACAAATCAAAGACA 60.041 33.333 6.09 0.00 39.34 3.41
2357 2870 7.803189 GCGATTTCTCTTACAAATCAAAGACAA 59.197 33.333 6.09 0.00 39.34 3.18
2358 2871 9.663904 CGATTTCTCTTACAAATCAAAGACAAA 57.336 29.630 6.09 0.00 39.34 2.83
2362 2875 9.787532 TTCTCTTACAAATCAAAGACAAAAGTG 57.212 29.630 0.00 0.00 0.00 3.16
2363 2876 9.173021 TCTCTTACAAATCAAAGACAAAAGTGA 57.827 29.630 0.00 0.00 0.00 3.41
2364 2877 9.787532 CTCTTACAAATCAAAGACAAAAGTGAA 57.212 29.630 0.00 0.00 0.00 3.18
2365 2878 9.787532 TCTTACAAATCAAAGACAAAAGTGAAG 57.212 29.630 0.00 0.00 0.00 3.02
2366 2879 8.925161 TTACAAATCAAAGACAAAAGTGAAGG 57.075 30.769 0.00 0.00 0.00 3.46
2367 2880 7.169158 ACAAATCAAAGACAAAAGTGAAGGA 57.831 32.000 0.00 0.00 0.00 3.36
2368 2881 7.260603 ACAAATCAAAGACAAAAGTGAAGGAG 58.739 34.615 0.00 0.00 0.00 3.69
2369 2882 6.396829 AATCAAAGACAAAAGTGAAGGAGG 57.603 37.500 0.00 0.00 0.00 4.30
2370 2883 4.855340 TCAAAGACAAAAGTGAAGGAGGT 58.145 39.130 0.00 0.00 0.00 3.85
2371 2884 5.261216 TCAAAGACAAAAGTGAAGGAGGTT 58.739 37.500 0.00 0.00 0.00 3.50
2372 2885 5.714806 TCAAAGACAAAAGTGAAGGAGGTTT 59.285 36.000 0.00 0.00 0.00 3.27
2373 2886 6.887545 TCAAAGACAAAAGTGAAGGAGGTTTA 59.112 34.615 0.00 0.00 0.00 2.01
2374 2887 7.559897 TCAAAGACAAAAGTGAAGGAGGTTTAT 59.440 33.333 0.00 0.00 0.00 1.40
2375 2888 7.898014 AAGACAAAAGTGAAGGAGGTTTATT 57.102 32.000 0.00 0.00 0.00 1.40
2376 2889 8.990163 AAGACAAAAGTGAAGGAGGTTTATTA 57.010 30.769 0.00 0.00 0.00 0.98
2377 2890 8.622948 AGACAAAAGTGAAGGAGGTTTATTAG 57.377 34.615 0.00 0.00 0.00 1.73
2378 2891 8.437575 AGACAAAAGTGAAGGAGGTTTATTAGA 58.562 33.333 0.00 0.00 0.00 2.10
2379 2892 8.622948 ACAAAAGTGAAGGAGGTTTATTAGAG 57.377 34.615 0.00 0.00 0.00 2.43
2380 2893 7.175119 ACAAAAGTGAAGGAGGTTTATTAGAGC 59.825 37.037 0.00 0.00 0.00 4.09
2381 2894 5.360649 AGTGAAGGAGGTTTATTAGAGCC 57.639 43.478 0.00 0.00 0.00 4.70
2382 2895 4.164413 AGTGAAGGAGGTTTATTAGAGCCC 59.836 45.833 0.00 0.00 0.00 5.19
2383 2896 3.134081 TGAAGGAGGTTTATTAGAGCCCG 59.866 47.826 0.00 0.00 0.00 6.13
2384 2897 2.047830 AGGAGGTTTATTAGAGCCCGG 58.952 52.381 0.00 0.00 0.00 5.73
2385 2898 2.044758 GGAGGTTTATTAGAGCCCGGA 58.955 52.381 0.73 0.00 0.00 5.14
2386 2899 2.224233 GGAGGTTTATTAGAGCCCGGAC 60.224 54.545 0.73 0.00 0.00 4.79
2387 2900 1.767088 AGGTTTATTAGAGCCCGGACC 59.233 52.381 0.73 0.00 0.00 4.46
2388 2901 1.539712 GGTTTATTAGAGCCCGGACCG 60.540 57.143 6.99 6.99 0.00 4.79
2389 2902 1.410153 GTTTATTAGAGCCCGGACCGA 59.590 52.381 17.49 0.00 0.00 4.69
2390 2903 2.005370 TTATTAGAGCCCGGACCGAT 57.995 50.000 17.49 0.83 0.00 4.18
2391 2904 2.005370 TATTAGAGCCCGGACCGATT 57.995 50.000 17.49 0.00 0.00 3.34
2392 2905 0.680061 ATTAGAGCCCGGACCGATTC 59.320 55.000 17.49 9.68 0.00 2.52
2393 2906 0.396695 TTAGAGCCCGGACCGATTCT 60.397 55.000 17.49 16.32 0.00 2.40
2394 2907 0.475475 TAGAGCCCGGACCGATTCTA 59.525 55.000 17.49 15.34 0.00 2.10
2395 2908 0.396695 AGAGCCCGGACCGATTCTAA 60.397 55.000 17.49 0.00 0.00 2.10
2396 2909 0.032267 GAGCCCGGACCGATTCTAAG 59.968 60.000 17.49 0.00 0.00 2.18
2397 2910 0.686769 AGCCCGGACCGATTCTAAGT 60.687 55.000 17.49 0.00 0.00 2.24
2398 2911 0.249363 GCCCGGACCGATTCTAAGTC 60.249 60.000 17.49 0.00 0.00 3.01
2399 2912 0.388294 CCCGGACCGATTCTAAGTCC 59.612 60.000 17.49 0.00 45.49 3.85
2401 2914 3.269520 GGACCGATTCTAAGTCCGC 57.730 57.895 0.00 0.00 40.65 5.54
2402 2915 0.745468 GGACCGATTCTAAGTCCGCT 59.255 55.000 0.00 0.00 40.65 5.52
2403 2916 1.136500 GGACCGATTCTAAGTCCGCTT 59.864 52.381 0.00 0.00 40.65 4.68
2404 2917 2.418334 GGACCGATTCTAAGTCCGCTTT 60.418 50.000 0.00 0.00 40.65 3.51
2405 2918 3.259902 GACCGATTCTAAGTCCGCTTTT 58.740 45.455 0.00 0.00 36.22 2.27
2406 2919 3.000727 ACCGATTCTAAGTCCGCTTTTG 58.999 45.455 0.00 0.00 36.22 2.44
2407 2920 3.259064 CCGATTCTAAGTCCGCTTTTGA 58.741 45.455 0.00 0.00 36.22 2.69
2408 2921 3.062234 CCGATTCTAAGTCCGCTTTTGAC 59.938 47.826 0.00 0.00 36.22 3.18
2409 2922 3.062234 CGATTCTAAGTCCGCTTTTGACC 59.938 47.826 0.00 0.00 36.22 4.02
2410 2923 3.478857 TTCTAAGTCCGCTTTTGACCA 57.521 42.857 0.00 0.00 36.22 4.02
2411 2924 3.695830 TCTAAGTCCGCTTTTGACCAT 57.304 42.857 0.00 0.00 36.22 3.55
2412 2925 3.596214 TCTAAGTCCGCTTTTGACCATC 58.404 45.455 0.00 0.00 36.22 3.51
2413 2926 1.534729 AAGTCCGCTTTTGACCATCC 58.465 50.000 0.00 0.00 33.09 3.51
2414 2927 0.693049 AGTCCGCTTTTGACCATCCT 59.307 50.000 0.00 0.00 33.09 3.24
2415 2928 0.804989 GTCCGCTTTTGACCATCCTG 59.195 55.000 0.00 0.00 0.00 3.86
2416 2929 0.690192 TCCGCTTTTGACCATCCTGA 59.310 50.000 0.00 0.00 0.00 3.86
2417 2930 0.804989 CCGCTTTTGACCATCCTGAC 59.195 55.000 0.00 0.00 0.00 3.51
2418 2931 0.804989 CGCTTTTGACCATCCTGACC 59.195 55.000 0.00 0.00 0.00 4.02
2419 2932 1.177401 GCTTTTGACCATCCTGACCC 58.823 55.000 0.00 0.00 0.00 4.46
2420 2933 1.547675 GCTTTTGACCATCCTGACCCA 60.548 52.381 0.00 0.00 0.00 4.51
2421 2934 2.162681 CTTTTGACCATCCTGACCCAC 58.837 52.381 0.00 0.00 0.00 4.61
2422 2935 0.404040 TTTGACCATCCTGACCCACC 59.596 55.000 0.00 0.00 0.00 4.61
2423 2936 0.770166 TTGACCATCCTGACCCACCA 60.770 55.000 0.00 0.00 0.00 4.17
2424 2937 0.770166 TGACCATCCTGACCCACCAA 60.770 55.000 0.00 0.00 0.00 3.67
2425 2938 0.404040 GACCATCCTGACCCACCAAA 59.596 55.000 0.00 0.00 0.00 3.28
2426 2939 0.856982 ACCATCCTGACCCACCAAAA 59.143 50.000 0.00 0.00 0.00 2.44
2427 2940 1.219213 ACCATCCTGACCCACCAAAAA 59.781 47.619 0.00 0.00 0.00 1.94
2428 2941 1.618343 CCATCCTGACCCACCAAAAAC 59.382 52.381 0.00 0.00 0.00 2.43
2429 2942 1.618343 CATCCTGACCCACCAAAAACC 59.382 52.381 0.00 0.00 0.00 3.27
2430 2943 0.930726 TCCTGACCCACCAAAAACCT 59.069 50.000 0.00 0.00 0.00 3.50
2431 2944 1.133606 TCCTGACCCACCAAAAACCTC 60.134 52.381 0.00 0.00 0.00 3.85
2432 2945 1.133482 CCTGACCCACCAAAAACCTCT 60.133 52.381 0.00 0.00 0.00 3.69
2433 2946 2.107552 CCTGACCCACCAAAAACCTCTA 59.892 50.000 0.00 0.00 0.00 2.43
2434 2947 3.146847 CTGACCCACCAAAAACCTCTAC 58.853 50.000 0.00 0.00 0.00 2.59
2435 2948 2.158579 TGACCCACCAAAAACCTCTACC 60.159 50.000 0.00 0.00 0.00 3.18
2436 2949 1.146359 ACCCACCAAAAACCTCTACCC 59.854 52.381 0.00 0.00 0.00 3.69
2437 2950 1.427753 CCCACCAAAAACCTCTACCCT 59.572 52.381 0.00 0.00 0.00 4.34
2438 2951 2.158370 CCCACCAAAAACCTCTACCCTT 60.158 50.000 0.00 0.00 0.00 3.95
2439 2952 3.572642 CCACCAAAAACCTCTACCCTTT 58.427 45.455 0.00 0.00 0.00 3.11
2440 2953 3.572682 CCACCAAAAACCTCTACCCTTTC 59.427 47.826 0.00 0.00 0.00 2.62
2441 2954 3.572682 CACCAAAAACCTCTACCCTTTCC 59.427 47.826 0.00 0.00 0.00 3.13
2442 2955 3.162666 CCAAAAACCTCTACCCTTTCCC 58.837 50.000 0.00 0.00 0.00 3.97
2443 2956 2.817844 CAAAAACCTCTACCCTTTCCCG 59.182 50.000 0.00 0.00 0.00 5.14
2444 2957 0.327259 AAACCTCTACCCTTTCCCGC 59.673 55.000 0.00 0.00 0.00 6.13
2445 2958 1.896122 AACCTCTACCCTTTCCCGCG 61.896 60.000 0.00 0.00 0.00 6.46
2446 2959 2.202892 CTCTACCCTTTCCCGCGC 60.203 66.667 0.00 0.00 0.00 6.86
2447 2960 4.137872 TCTACCCTTTCCCGCGCG 62.138 66.667 25.67 25.67 0.00 6.86
2448 2961 4.446413 CTACCCTTTCCCGCGCGT 62.446 66.667 29.95 10.01 0.00 6.01
2449 2962 3.945304 CTACCCTTTCCCGCGCGTT 62.945 63.158 29.95 4.45 0.00 4.84
2450 2963 3.534054 TACCCTTTCCCGCGCGTTT 62.534 57.895 29.95 5.54 0.00 3.60
2451 2964 3.666253 CCCTTTCCCGCGCGTTTT 61.666 61.111 29.95 0.00 0.00 2.43
2452 2965 2.127003 CCTTTCCCGCGCGTTTTC 60.127 61.111 29.95 0.00 0.00 2.29
2453 2966 2.634777 CTTTCCCGCGCGTTTTCA 59.365 55.556 29.95 7.42 0.00 2.69
2454 2967 1.440353 CTTTCCCGCGCGTTTTCAG 60.440 57.895 29.95 13.56 0.00 3.02
2455 2968 2.113131 CTTTCCCGCGCGTTTTCAGT 62.113 55.000 29.95 0.00 0.00 3.41
2456 2969 1.716826 TTTCCCGCGCGTTTTCAGTT 61.717 50.000 29.95 0.00 0.00 3.16
2457 2970 1.716826 TTCCCGCGCGTTTTCAGTTT 61.717 50.000 29.95 0.00 0.00 2.66
2458 2971 2.008697 CCCGCGCGTTTTCAGTTTG 61.009 57.895 29.95 8.79 0.00 2.93
2459 2972 2.635305 CCGCGCGTTTTCAGTTTGC 61.635 57.895 29.95 0.00 0.00 3.68
2461 2974 2.829834 CGCGTTTTCAGTTTGCGC 59.170 55.556 0.00 0.00 42.42 6.09
2462 2975 2.635305 CGCGTTTTCAGTTTGCGCC 61.635 57.895 4.18 0.00 44.45 6.53
2463 2976 2.300066 GCGTTTTCAGTTTGCGCCC 61.300 57.895 4.18 0.00 41.93 6.13
2464 2977 2.008697 CGTTTTCAGTTTGCGCCCG 61.009 57.895 4.18 0.00 0.00 6.13
2465 2978 2.026879 TTTTCAGTTTGCGCCCGC 59.973 55.556 4.18 5.60 42.35 6.13
2484 2997 1.236628 CATTCATGCCCAGCTAGAGC 58.763 55.000 0.00 0.00 42.49 4.09
2521 3034 3.443045 CGCCGGCATGGAAGCTTT 61.443 61.111 28.98 0.00 42.00 3.51
2522 3035 2.973082 GCCGGCATGGAAGCTTTT 59.027 55.556 24.80 0.00 42.00 2.27
2523 3036 1.153765 GCCGGCATGGAAGCTTTTC 60.154 57.895 24.80 0.00 42.00 2.29
2524 3037 1.137404 CCGGCATGGAAGCTTTTCG 59.863 57.895 0.00 0.00 42.00 3.46
2525 3038 1.137404 CGGCATGGAAGCTTTTCGG 59.863 57.895 0.00 0.00 34.17 4.30
2526 3039 1.586154 CGGCATGGAAGCTTTTCGGT 61.586 55.000 0.00 0.00 34.17 4.69
2527 3040 0.109132 GGCATGGAAGCTTTTCGGTG 60.109 55.000 0.00 1.60 34.17 4.94
2528 3041 0.733909 GCATGGAAGCTTTTCGGTGC 60.734 55.000 0.00 7.63 0.00 5.01
2529 3042 0.597568 CATGGAAGCTTTTCGGTGCA 59.402 50.000 0.00 0.00 0.00 4.57
2530 3043 0.883833 ATGGAAGCTTTTCGGTGCAG 59.116 50.000 0.00 0.00 0.00 4.41
2531 3044 1.172180 TGGAAGCTTTTCGGTGCAGG 61.172 55.000 0.00 0.00 0.00 4.85
2532 3045 1.081175 GAAGCTTTTCGGTGCAGGC 60.081 57.895 0.00 0.00 0.00 4.85
2533 3046 2.786564 GAAGCTTTTCGGTGCAGGCG 62.787 60.000 0.00 0.00 0.00 5.52
2534 3047 3.353836 GCTTTTCGGTGCAGGCGA 61.354 61.111 0.00 0.00 0.00 5.54
2535 3048 2.556287 CTTTTCGGTGCAGGCGAC 59.444 61.111 0.00 0.00 0.00 5.19
2536 3049 2.966309 CTTTTCGGTGCAGGCGACC 61.966 63.158 0.00 3.69 0.00 4.79
2549 3062 3.460278 CGACCGTCGCGCGTTTAA 61.460 61.111 30.98 7.39 39.32 1.52
2550 3063 2.845530 GACCGTCGCGCGTTTAAA 59.154 55.556 30.98 6.92 39.32 1.52
2551 3064 1.505666 GACCGTCGCGCGTTTAAAC 60.506 57.895 30.98 18.95 39.32 2.01
2562 3075 3.333762 GTTTAAACGACACGACGGC 57.666 52.632 1.89 0.00 37.61 5.68
2563 3076 0.111134 GTTTAAACGACACGACGGCC 60.111 55.000 1.89 0.00 37.61 6.13
2564 3077 1.547292 TTTAAACGACACGACGGCCG 61.547 55.000 26.86 26.86 45.44 6.13
2599 3112 4.557605 CGCCCGCATTGATGGCAC 62.558 66.667 14.74 0.00 45.63 5.01
2619 3132 2.436824 GGTTGCCGAGGCTTCTCC 60.437 66.667 15.75 8.35 42.51 3.71
2627 3140 3.453679 AGGCTTCTCCTCCGACGC 61.454 66.667 0.00 0.00 43.20 5.19
2628 3141 4.516195 GGCTTCTCCTCCGACGCC 62.516 72.222 0.00 0.00 40.48 5.68
2629 3142 3.760035 GCTTCTCCTCCGACGCCA 61.760 66.667 0.00 0.00 0.00 5.69
2630 3143 2.182030 CTTCTCCTCCGACGCCAC 59.818 66.667 0.00 0.00 0.00 5.01
2631 3144 2.599281 TTCTCCTCCGACGCCACA 60.599 61.111 0.00 0.00 0.00 4.17
2632 3145 2.820767 CTTCTCCTCCGACGCCACAC 62.821 65.000 0.00 0.00 0.00 3.82
2633 3146 3.680786 CTCCTCCGACGCCACACA 61.681 66.667 0.00 0.00 0.00 3.72
2634 3147 2.994995 TCCTCCGACGCCACACAT 60.995 61.111 0.00 0.00 0.00 3.21
2635 3148 2.509336 CCTCCGACGCCACACATC 60.509 66.667 0.00 0.00 0.00 3.06
2636 3149 2.509336 CTCCGACGCCACACATCC 60.509 66.667 0.00 0.00 0.00 3.51
2637 3150 4.429212 TCCGACGCCACACATCCG 62.429 66.667 0.00 0.00 0.00 4.18
2638 3151 4.735132 CCGACGCCACACATCCGT 62.735 66.667 0.00 0.00 37.99 4.69
2639 3152 3.179265 CGACGCCACACATCCGTC 61.179 66.667 2.63 2.63 45.56 4.79
2640 3153 2.813908 GACGCCACACATCCGTCC 60.814 66.667 1.34 0.00 43.89 4.79
2641 3154 4.388499 ACGCCACACATCCGTCCC 62.388 66.667 0.00 0.00 0.00 4.46
2642 3155 4.082523 CGCCACACATCCGTCCCT 62.083 66.667 0.00 0.00 0.00 4.20
2643 3156 2.125106 GCCACACATCCGTCCCTC 60.125 66.667 0.00 0.00 0.00 4.30
2644 3157 2.660064 GCCACACATCCGTCCCTCT 61.660 63.158 0.00 0.00 0.00 3.69
2645 3158 1.219124 CCACACATCCGTCCCTCTG 59.781 63.158 0.00 0.00 0.00 3.35
2646 3159 1.544825 CCACACATCCGTCCCTCTGT 61.545 60.000 0.00 0.00 0.00 3.41
2647 3160 0.108615 CACACATCCGTCCCTCTGTC 60.109 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.981943 ACTCCCTCCGTTCGGAAAAT 59.018 50.000 14.79 0.00 33.41 1.82
1 2 1.273327 GTACTCCCTCCGTTCGGAAAA 59.727 52.381 14.79 3.16 33.41 2.29
2 3 0.890683 GTACTCCCTCCGTTCGGAAA 59.109 55.000 14.79 3.49 33.41 3.13
3 4 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
4 5 0.962356 GTGTACTCCCTCCGTTCGGA 60.962 60.000 13.34 13.34 0.00 4.55
5 6 1.509923 GTGTACTCCCTCCGTTCGG 59.490 63.158 4.74 4.74 0.00 4.30
6 7 1.246056 TGGTGTACTCCCTCCGTTCG 61.246 60.000 11.36 0.00 0.00 3.95
7 8 1.192428 ATGGTGTACTCCCTCCGTTC 58.808 55.000 11.36 0.00 0.00 3.95
8 9 2.537633 TATGGTGTACTCCCTCCGTT 57.462 50.000 11.36 0.00 0.00 4.44
9 10 2.769602 ATATGGTGTACTCCCTCCGT 57.230 50.000 11.36 2.45 0.00 4.69
10 11 3.386726 TGAAATATGGTGTACTCCCTCCG 59.613 47.826 11.36 0.00 0.00 4.63
11 12 4.654262 TCTGAAATATGGTGTACTCCCTCC 59.346 45.833 11.36 0.00 0.00 4.30
12 13 5.871396 TCTGAAATATGGTGTACTCCCTC 57.129 43.478 11.36 1.90 0.00 4.30
13 14 6.831664 ATTCTGAAATATGGTGTACTCCCT 57.168 37.500 11.36 4.35 0.00 4.20
14 15 7.881775 AAATTCTGAAATATGGTGTACTCCC 57.118 36.000 11.36 3.51 0.00 4.30
42 43 6.019748 TCCCCTTTAATTTGGTGCTATTGAA 58.980 36.000 0.00 0.00 0.00 2.69
43 44 5.584913 TCCCCTTTAATTTGGTGCTATTGA 58.415 37.500 0.00 0.00 0.00 2.57
44 45 5.422012 ACTCCCCTTTAATTTGGTGCTATTG 59.578 40.000 0.00 0.00 0.00 1.90
45 46 5.589831 ACTCCCCTTTAATTTGGTGCTATT 58.410 37.500 0.00 0.00 0.00 1.73
47 48 4.668138 ACTCCCCTTTAATTTGGTGCTA 57.332 40.909 0.00 0.00 0.00 3.49
48 49 3.542969 ACTCCCCTTTAATTTGGTGCT 57.457 42.857 0.00 0.00 0.00 4.40
50 51 4.600062 AGCTACTCCCCTTTAATTTGGTG 58.400 43.478 0.00 0.00 0.00 4.17
51 52 4.540502 AGAGCTACTCCCCTTTAATTTGGT 59.459 41.667 0.00 0.00 0.00 3.67
82 83 4.944317 TGTGTGTGTGTGTGGAAAATAAGA 59.056 37.500 0.00 0.00 0.00 2.10
84 85 4.459337 TGTGTGTGTGTGTGTGGAAAATAA 59.541 37.500 0.00 0.00 0.00 1.40
85 86 4.010349 TGTGTGTGTGTGTGTGGAAAATA 58.990 39.130 0.00 0.00 0.00 1.40
88 89 1.537638 GTGTGTGTGTGTGTGTGGAAA 59.462 47.619 0.00 0.00 0.00 3.13
90 91 0.035458 TGTGTGTGTGTGTGTGTGGA 59.965 50.000 0.00 0.00 0.00 4.02
91 92 0.167908 GTGTGTGTGTGTGTGTGTGG 59.832 55.000 0.00 0.00 0.00 4.17
92 93 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
93 94 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
94 95 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
95 96 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
96 97 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
97 98 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
98 99 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
99 100 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
100 101 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
101 102 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
102 103 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
103 104 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
104 105 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
105 106 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
106 107 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
107 108 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
108 109 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
109 110 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
110 111 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
111 112 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
112 113 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
113 114 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
114 115 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
115 116 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
116 117 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
117 118 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
118 119 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
119 120 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
120 121 5.861222 ATATATGTGTGTGTGTGTGTGTG 57.139 39.130 0.00 0.00 0.00 3.82
148 149 5.544136 TGATCAACGTTGGTATTGATGTG 57.456 39.130 27.02 0.00 43.85 3.21
152 153 5.547465 AGAGTTGATCAACGTTGGTATTGA 58.453 37.500 28.18 8.18 45.50 2.57
153 154 5.862924 AGAGTTGATCAACGTTGGTATTG 57.137 39.130 28.18 2.01 45.50 1.90
215 216 7.951530 AACAGCAGAGACAAAATTTAAATGG 57.048 32.000 0.39 0.00 0.00 3.16
221 222 8.807667 CTGAAATAACAGCAGAGACAAAATTT 57.192 30.769 0.00 0.00 0.00 1.82
244 245 5.748592 CACAACTCACATATGATCATGCTG 58.251 41.667 18.72 16.52 33.22 4.41
302 304 2.094854 GGCAAACCAGCTCTTGATGAAG 60.095 50.000 4.31 0.00 35.26 3.02
305 307 0.529378 GGGCAAACCAGCTCTTGATG 59.471 55.000 4.31 0.00 39.85 3.07
307 309 1.600636 CGGGCAAACCAGCTCTTGA 60.601 57.895 4.31 0.00 40.22 3.02
470 798 6.818644 TGAACCCATTTCACGAAATTTGAAAA 59.181 30.769 7.64 0.00 44.14 2.29
471 799 6.341316 TGAACCCATTTCACGAAATTTGAAA 58.659 32.000 6.31 6.31 44.84 2.69
472 800 5.907207 TGAACCCATTTCACGAAATTTGAA 58.093 33.333 0.00 0.00 39.45 2.69
473 801 5.521906 TGAACCCATTTCACGAAATTTGA 57.478 34.783 0.00 0.00 39.45 2.69
531 861 1.072489 TGCGGGAAGTATGTGTTCCAA 59.928 47.619 4.35 0.00 44.75 3.53
546 876 1.201943 CGGTACAAATACGTTTGCGGG 60.202 52.381 0.00 0.00 46.84 6.13
548 878 1.127213 AGCGGTACAAATACGTTTGCG 59.873 47.619 0.00 0.00 46.84 4.85
550 880 5.177909 CGAACAGCGGTACAAATACGTTTG 61.178 45.833 0.00 0.00 42.33 2.93
586 917 1.722464 CGAAAAACGGTATGACTCGCA 59.278 47.619 0.00 0.00 38.46 5.10
606 937 7.564793 TGTACTGGTATGCATAATATCCCATC 58.435 38.462 8.28 5.87 0.00 3.51
607 938 7.509236 TGTACTGGTATGCATAATATCCCAT 57.491 36.000 8.28 4.69 0.00 4.00
616 947 5.928976 AGAAGCATTGTACTGGTATGCATA 58.071 37.500 18.21 1.16 45.39 3.14
617 948 4.785301 AGAAGCATTGTACTGGTATGCAT 58.215 39.130 18.21 3.79 45.39 3.96
619 950 4.752101 CCTAGAAGCATTGTACTGGTATGC 59.248 45.833 12.02 12.02 43.78 3.14
649 983 9.817365 GTCTTACTTAATTTACTCGGGTTTTTC 57.183 33.333 0.00 0.00 0.00 2.29
710 1044 2.987125 CGGACTCCATTTCCCCGT 59.013 61.111 0.00 0.00 35.83 5.28
715 1049 2.194201 TTTGGGACGGACTCCATTTC 57.806 50.000 0.00 0.00 41.63 2.17
720 1054 2.290071 TGAAGAATTTGGGACGGACTCC 60.290 50.000 0.00 0.00 38.55 3.85
798 1183 2.922740 AAAGTGCTTCCGTGTCCTTA 57.077 45.000 0.00 0.00 0.00 2.69
837 1222 3.119459 TCTCGCGTATTGCTCTCTTTCTT 60.119 43.478 5.77 0.00 43.27 2.52
838 1223 2.423892 TCTCGCGTATTGCTCTCTTTCT 59.576 45.455 5.77 0.00 43.27 2.52
839 1224 2.798680 TCTCGCGTATTGCTCTCTTTC 58.201 47.619 5.77 0.00 43.27 2.62
840 1225 2.941453 TCTCGCGTATTGCTCTCTTT 57.059 45.000 5.77 0.00 43.27 2.52
841 1226 2.941453 TTCTCGCGTATTGCTCTCTT 57.059 45.000 5.77 0.00 43.27 2.85
842 1227 2.480416 CCTTTCTCGCGTATTGCTCTCT 60.480 50.000 5.77 0.00 43.27 3.10
845 1230 1.855360 CTCCTTTCTCGCGTATTGCTC 59.145 52.381 5.77 0.00 43.27 4.26
848 1233 4.030134 ACTACTCCTTTCTCGCGTATTG 57.970 45.455 5.77 0.00 0.00 1.90
851 1236 6.925610 TTTATACTACTCCTTTCTCGCGTA 57.074 37.500 5.77 0.00 0.00 4.42
861 1246 7.137567 ACCAGGGTTGTATTTATACTACTCCT 58.862 38.462 9.67 11.76 39.33 3.69
862 1247 7.370905 ACCAGGGTTGTATTTATACTACTCC 57.629 40.000 9.67 10.28 39.33 3.85
863 1248 7.070322 TGGACCAGGGTTGTATTTATACTACTC 59.930 40.741 12.07 9.35 38.97 2.59
921 1306 0.771127 TTGGGTGGGAGAGAGTTTGG 59.229 55.000 0.00 0.00 0.00 3.28
922 1307 1.421646 AGTTGGGTGGGAGAGAGTTTG 59.578 52.381 0.00 0.00 0.00 2.93
925 1310 0.191064 TGAGTTGGGTGGGAGAGAGT 59.809 55.000 0.00 0.00 0.00 3.24
931 1316 0.761323 TCGAGTTGAGTTGGGTGGGA 60.761 55.000 0.00 0.00 0.00 4.37
955 1340 1.774254 TGTGGAGGCTTTGAAGGAAGA 59.226 47.619 0.00 0.00 0.00 2.87
956 1341 2.157738 CTGTGGAGGCTTTGAAGGAAG 58.842 52.381 0.00 0.00 0.00 3.46
957 1342 1.819305 GCTGTGGAGGCTTTGAAGGAA 60.819 52.381 0.00 0.00 0.00 3.36
958 1343 0.250901 GCTGTGGAGGCTTTGAAGGA 60.251 55.000 0.00 0.00 0.00 3.36
1039 1427 0.719015 ACAGGGAGGATGGAGGAGAA 59.281 55.000 0.00 0.00 0.00 2.87
1391 1779 0.531200 GTCCGACGAATCCTTCTGGT 59.469 55.000 0.00 0.00 34.23 4.00
1416 1822 2.418910 CCGCATGTCCTCGTCCTCT 61.419 63.158 0.00 0.00 0.00 3.69
1649 2070 1.851053 CATCAGCATCAGTCGAAGTCG 59.149 52.381 0.00 0.00 41.45 4.18
1650 2071 3.156511 TCATCAGCATCAGTCGAAGTC 57.843 47.619 0.00 0.00 0.00 3.01
1651 2072 3.599730 TTCATCAGCATCAGTCGAAGT 57.400 42.857 0.00 0.00 0.00 3.01
1652 2073 3.869832 ACATTCATCAGCATCAGTCGAAG 59.130 43.478 0.00 0.00 0.00 3.79
1653 2074 3.619929 CACATTCATCAGCATCAGTCGAA 59.380 43.478 0.00 0.00 0.00 3.71
1732 2162 1.143969 GGAGCGGTTACACGGATTCG 61.144 60.000 0.00 0.00 43.02 3.34
1773 2203 2.836479 ACGAAGGAACAAACAAACCG 57.164 45.000 0.00 0.00 0.00 4.44
1867 2298 6.489022 ACCTTGTGGTAATTCTTCCAAGTAAC 59.511 38.462 0.00 0.00 46.43 2.50
1910 2349 2.259618 AGATGCGCTACAGTGTTTACG 58.740 47.619 9.73 4.44 0.00 3.18
1950 2389 2.095718 GCCGGATTCAACTCAACTCAAC 60.096 50.000 5.05 0.00 0.00 3.18
1951 2390 2.151202 GCCGGATTCAACTCAACTCAA 58.849 47.619 5.05 0.00 0.00 3.02
1952 2391 1.808411 GCCGGATTCAACTCAACTCA 58.192 50.000 5.05 0.00 0.00 3.41
1984 2428 1.400142 TGCCGGAATGTTCGCAAATAG 59.600 47.619 5.05 0.00 0.00 1.73
2020 2464 4.600576 TGCCACGAAGCACGCAGA 62.601 61.111 0.00 0.00 46.94 4.26
2038 2482 1.404391 GCACATTTCAGATCCAGCCAG 59.596 52.381 0.00 0.00 0.00 4.85
2039 2483 1.272037 TGCACATTTCAGATCCAGCCA 60.272 47.619 0.00 0.00 0.00 4.75
2040 2484 1.466856 TGCACATTTCAGATCCAGCC 58.533 50.000 0.00 0.00 0.00 4.85
2041 2485 3.795623 ATTGCACATTTCAGATCCAGC 57.204 42.857 0.00 0.00 0.00 4.85
2086 2538 3.451894 GAAGTGCAATGGGGGCGG 61.452 66.667 0.00 0.00 0.00 6.13
2089 2541 0.680921 ATCGTGAAGTGCAATGGGGG 60.681 55.000 0.00 0.00 0.00 5.40
2135 2616 5.462398 ACACAAATATCTAATTCGTCCGAGC 59.538 40.000 0.00 0.00 0.00 5.03
2139 2620 7.210873 AGAGGACACAAATATCTAATTCGTCC 58.789 38.462 0.00 0.00 40.55 4.79
2166 2647 4.495565 CTCCTACTCTAGTCTCTAGGGGA 58.504 52.174 8.29 0.00 0.00 4.81
2169 2650 4.967084 TGCTCCTACTCTAGTCTCTAGG 57.033 50.000 4.32 0.00 0.00 3.02
2170 2651 6.109156 TCATGCTCCTACTCTAGTCTCTAG 57.891 45.833 0.00 0.00 0.00 2.43
2172 2653 4.746702 GCTCATGCTCCTACTCTAGTCTCT 60.747 50.000 0.00 0.00 36.03 3.10
2173 2654 3.502211 GCTCATGCTCCTACTCTAGTCTC 59.498 52.174 0.00 0.00 36.03 3.36
2243 2756 2.045340 CCTTACTTGGGTGGGCCG 60.045 66.667 0.00 0.00 34.97 6.13
2249 2762 1.992557 TGAAGATGGCCTTACTTGGGT 59.007 47.619 3.32 0.00 34.68 4.51
2253 2766 2.684881 CGCATTGAAGATGGCCTTACTT 59.315 45.455 3.32 6.83 34.68 2.24
2255 2768 1.334869 CCGCATTGAAGATGGCCTTAC 59.665 52.381 3.32 0.00 34.68 2.34
2256 2769 1.211703 TCCGCATTGAAGATGGCCTTA 59.788 47.619 3.32 0.00 34.68 2.69
2257 2770 0.034186 TCCGCATTGAAGATGGCCTT 60.034 50.000 3.32 0.00 37.93 4.35
2259 2772 1.728490 GGTCCGCATTGAAGATGGCC 61.728 60.000 0.00 0.00 0.00 5.36
2260 2773 1.728490 GGGTCCGCATTGAAGATGGC 61.728 60.000 0.00 0.00 0.00 4.40
2261 2774 1.439353 CGGGTCCGCATTGAAGATGG 61.439 60.000 0.00 0.00 0.00 3.51
2262 2775 2.016961 CGGGTCCGCATTGAAGATG 58.983 57.895 0.00 0.00 0.00 2.90
2263 2776 4.540153 CGGGTCCGCATTGAAGAT 57.460 55.556 0.00 0.00 0.00 2.40
2273 2786 1.082366 CGAAAAGTTTGCGGGTCCG 60.082 57.895 8.20 4.85 43.09 4.79
2274 2787 1.228533 TACGAAAAGTTTGCGGGTCC 58.771 50.000 19.93 0.00 0.00 4.46
2275 2788 2.288729 AGTTACGAAAAGTTTGCGGGTC 59.711 45.455 19.93 9.18 0.00 4.46
2276 2789 2.032426 CAGTTACGAAAAGTTTGCGGGT 59.968 45.455 19.93 2.73 0.00 5.28
2277 2790 2.032426 ACAGTTACGAAAAGTTTGCGGG 59.968 45.455 19.93 6.63 0.00 6.13
2278 2791 3.328237 ACAGTTACGAAAAGTTTGCGG 57.672 42.857 19.93 4.45 0.00 5.69
2279 2792 4.336101 TGAACAGTTACGAAAAGTTTGCG 58.664 39.130 14.60 14.60 0.00 4.85
2280 2793 4.204370 GCTGAACAGTTACGAAAAGTTTGC 59.796 41.667 3.77 0.00 0.00 3.68
2281 2794 5.227184 GTGCTGAACAGTTACGAAAAGTTTG 59.773 40.000 3.77 0.00 0.00 2.93
2282 2795 5.106475 TGTGCTGAACAGTTACGAAAAGTTT 60.106 36.000 3.77 0.00 33.78 2.66
2283 2796 4.393680 TGTGCTGAACAGTTACGAAAAGTT 59.606 37.500 3.77 0.00 33.78 2.66
2284 2797 3.936453 TGTGCTGAACAGTTACGAAAAGT 59.064 39.130 3.77 0.00 33.78 2.66
2285 2798 4.201773 TGTGTGCTGAACAGTTACGAAAAG 60.202 41.667 3.77 0.00 40.26 2.27
2286 2799 3.685272 TGTGTGCTGAACAGTTACGAAAA 59.315 39.130 3.77 0.00 40.26 2.29
2287 2800 3.263261 TGTGTGCTGAACAGTTACGAAA 58.737 40.909 3.77 0.00 40.26 3.46
2288 2801 2.894902 TGTGTGCTGAACAGTTACGAA 58.105 42.857 3.77 0.00 40.26 3.85
2289 2802 2.588027 TGTGTGCTGAACAGTTACGA 57.412 45.000 3.77 0.00 40.26 3.43
2290 2803 2.543848 ACATGTGTGCTGAACAGTTACG 59.456 45.455 0.00 0.00 40.26 3.18
2291 2804 4.552166 AACATGTGTGCTGAACAGTTAC 57.448 40.909 0.00 4.53 40.26 2.50
2292 2805 4.637977 TGAAACATGTGTGCTGAACAGTTA 59.362 37.500 0.00 0.00 40.26 2.24
2293 2806 3.443329 TGAAACATGTGTGCTGAACAGTT 59.557 39.130 0.00 0.00 40.26 3.16
2294 2807 3.016031 TGAAACATGTGTGCTGAACAGT 58.984 40.909 0.00 0.00 40.26 3.55
2295 2808 3.696281 TGAAACATGTGTGCTGAACAG 57.304 42.857 0.00 0.00 40.26 3.16
2296 2809 4.142204 ACAATGAAACATGTGTGCTGAACA 60.142 37.500 0.00 0.00 36.04 3.18
2297 2810 4.207635 CACAATGAAACATGTGTGCTGAAC 59.792 41.667 0.00 0.00 41.51 3.18
2298 2811 4.361420 CACAATGAAACATGTGTGCTGAA 58.639 39.130 0.00 0.00 41.51 3.02
2299 2812 3.967401 CACAATGAAACATGTGTGCTGA 58.033 40.909 0.00 0.00 41.51 4.26
2306 2819 2.030893 CGGCTCACACAATGAAACATGT 60.031 45.455 0.00 0.00 36.69 3.21
2307 2820 2.587956 CGGCTCACACAATGAAACATG 58.412 47.619 0.00 0.00 36.69 3.21
2308 2821 1.541147 CCGGCTCACACAATGAAACAT 59.459 47.619 0.00 0.00 36.69 2.71
2309 2822 0.950836 CCGGCTCACACAATGAAACA 59.049 50.000 0.00 0.00 36.69 2.83
2310 2823 1.234821 TCCGGCTCACACAATGAAAC 58.765 50.000 0.00 0.00 36.69 2.78
2311 2824 1.811965 CATCCGGCTCACACAATGAAA 59.188 47.619 0.00 0.00 36.69 2.69
2312 2825 1.452110 CATCCGGCTCACACAATGAA 58.548 50.000 0.00 0.00 36.69 2.57
2313 2826 1.026182 GCATCCGGCTCACACAATGA 61.026 55.000 0.00 0.00 40.25 2.57
2314 2827 1.430632 GCATCCGGCTCACACAATG 59.569 57.895 0.00 0.00 40.25 2.82
2315 2828 2.108514 CGCATCCGGCTCACACAAT 61.109 57.895 0.00 0.00 41.67 2.71
2316 2829 2.520465 ATCGCATCCGGCTCACACAA 62.520 55.000 0.00 0.00 41.67 3.33
2317 2830 2.520465 AATCGCATCCGGCTCACACA 62.520 55.000 0.00 0.00 41.67 3.72
2318 2831 1.369091 AAATCGCATCCGGCTCACAC 61.369 55.000 0.00 0.00 41.67 3.82
2319 2832 1.078497 AAATCGCATCCGGCTCACA 60.078 52.632 0.00 0.00 41.67 3.58
2320 2833 0.811616 AGAAATCGCATCCGGCTCAC 60.812 55.000 0.00 0.00 41.67 3.51
2321 2834 0.530650 GAGAAATCGCATCCGGCTCA 60.531 55.000 0.00 0.00 41.67 4.26
2322 2835 0.249657 AGAGAAATCGCATCCGGCTC 60.250 55.000 0.00 0.00 41.67 4.70
2323 2836 0.179000 AAGAGAAATCGCATCCGGCT 59.821 50.000 0.00 0.00 41.67 5.52
2324 2837 1.527311 GTAAGAGAAATCGCATCCGGC 59.473 52.381 0.00 0.00 39.90 6.13
2325 2838 2.821546 TGTAAGAGAAATCGCATCCGG 58.178 47.619 0.00 0.00 34.56 5.14
2326 2839 4.857871 TTTGTAAGAGAAATCGCATCCG 57.142 40.909 0.00 0.00 0.00 4.18
2327 2840 6.363577 TGATTTGTAAGAGAAATCGCATCC 57.636 37.500 0.00 0.00 41.03 3.51
2328 2841 8.177663 TCTTTGATTTGTAAGAGAAATCGCATC 58.822 33.333 0.00 0.00 41.03 3.91
2329 2842 7.965107 GTCTTTGATTTGTAAGAGAAATCGCAT 59.035 33.333 0.00 0.00 41.03 4.73
2330 2843 7.041440 TGTCTTTGATTTGTAAGAGAAATCGCA 60.041 33.333 0.00 0.00 41.03 5.10
2331 2844 7.298122 TGTCTTTGATTTGTAAGAGAAATCGC 58.702 34.615 0.00 0.00 41.03 4.58
2332 2845 9.663904 TTTGTCTTTGATTTGTAAGAGAAATCG 57.336 29.630 0.00 0.00 41.03 3.34
2336 2849 9.787532 CACTTTTGTCTTTGATTTGTAAGAGAA 57.212 29.630 0.00 0.00 0.00 2.87
2337 2850 9.173021 TCACTTTTGTCTTTGATTTGTAAGAGA 57.827 29.630 0.00 0.00 0.00 3.10
2338 2851 9.787532 TTCACTTTTGTCTTTGATTTGTAAGAG 57.212 29.630 0.00 0.00 0.00 2.85
2339 2852 9.787532 CTTCACTTTTGTCTTTGATTTGTAAGA 57.212 29.630 0.00 0.00 0.00 2.10
2340 2853 9.023967 CCTTCACTTTTGTCTTTGATTTGTAAG 57.976 33.333 0.00 0.00 0.00 2.34
2341 2854 8.744652 TCCTTCACTTTTGTCTTTGATTTGTAA 58.255 29.630 0.00 0.00 0.00 2.41
2342 2855 8.287439 TCCTTCACTTTTGTCTTTGATTTGTA 57.713 30.769 0.00 0.00 0.00 2.41
2343 2856 7.169158 TCCTTCACTTTTGTCTTTGATTTGT 57.831 32.000 0.00 0.00 0.00 2.83
2344 2857 6.698766 CCTCCTTCACTTTTGTCTTTGATTTG 59.301 38.462 0.00 0.00 0.00 2.32
2345 2858 6.381133 ACCTCCTTCACTTTTGTCTTTGATTT 59.619 34.615 0.00 0.00 0.00 2.17
2346 2859 5.893824 ACCTCCTTCACTTTTGTCTTTGATT 59.106 36.000 0.00 0.00 0.00 2.57
2347 2860 5.449553 ACCTCCTTCACTTTTGTCTTTGAT 58.550 37.500 0.00 0.00 0.00 2.57
2348 2861 4.855340 ACCTCCTTCACTTTTGTCTTTGA 58.145 39.130 0.00 0.00 0.00 2.69
2349 2862 5.582689 AACCTCCTTCACTTTTGTCTTTG 57.417 39.130 0.00 0.00 0.00 2.77
2350 2863 7.898014 ATAAACCTCCTTCACTTTTGTCTTT 57.102 32.000 0.00 0.00 0.00 2.52
2351 2864 7.898014 AATAAACCTCCTTCACTTTTGTCTT 57.102 32.000 0.00 0.00 0.00 3.01
2352 2865 8.437575 TCTAATAAACCTCCTTCACTTTTGTCT 58.562 33.333 0.00 0.00 0.00 3.41
2353 2866 8.617290 TCTAATAAACCTCCTTCACTTTTGTC 57.383 34.615 0.00 0.00 0.00 3.18
2354 2867 7.175119 GCTCTAATAAACCTCCTTCACTTTTGT 59.825 37.037 0.00 0.00 0.00 2.83
2355 2868 7.362142 GGCTCTAATAAACCTCCTTCACTTTTG 60.362 40.741 0.00 0.00 0.00 2.44
2356 2869 6.659668 GGCTCTAATAAACCTCCTTCACTTTT 59.340 38.462 0.00 0.00 0.00 2.27
2357 2870 6.181190 GGCTCTAATAAACCTCCTTCACTTT 58.819 40.000 0.00 0.00 0.00 2.66
2358 2871 5.339282 GGGCTCTAATAAACCTCCTTCACTT 60.339 44.000 0.00 0.00 0.00 3.16
2359 2872 4.164413 GGGCTCTAATAAACCTCCTTCACT 59.836 45.833 0.00 0.00 0.00 3.41
2360 2873 4.452825 GGGCTCTAATAAACCTCCTTCAC 58.547 47.826 0.00 0.00 0.00 3.18
2361 2874 3.134081 CGGGCTCTAATAAACCTCCTTCA 59.866 47.826 0.00 0.00 0.00 3.02
2362 2875 3.494573 CCGGGCTCTAATAAACCTCCTTC 60.495 52.174 0.00 0.00 0.00 3.46
2363 2876 2.438392 CCGGGCTCTAATAAACCTCCTT 59.562 50.000 0.00 0.00 0.00 3.36
2364 2877 2.047830 CCGGGCTCTAATAAACCTCCT 58.952 52.381 0.00 0.00 0.00 3.69
2365 2878 2.044758 TCCGGGCTCTAATAAACCTCC 58.955 52.381 0.00 0.00 0.00 4.30
2366 2879 2.224233 GGTCCGGGCTCTAATAAACCTC 60.224 54.545 5.77 0.00 0.00 3.85
2367 2880 1.767088 GGTCCGGGCTCTAATAAACCT 59.233 52.381 5.77 0.00 0.00 3.50
2368 2881 1.539712 CGGTCCGGGCTCTAATAAACC 60.540 57.143 5.77 0.00 0.00 3.27
2369 2882 1.410153 TCGGTCCGGGCTCTAATAAAC 59.590 52.381 12.29 0.00 0.00 2.01
2370 2883 1.779221 TCGGTCCGGGCTCTAATAAA 58.221 50.000 12.29 0.00 0.00 1.40
2371 2884 2.005370 ATCGGTCCGGGCTCTAATAA 57.995 50.000 12.29 0.00 0.00 1.40
2372 2885 1.891150 GAATCGGTCCGGGCTCTAATA 59.109 52.381 12.29 0.00 0.00 0.98
2373 2886 0.680061 GAATCGGTCCGGGCTCTAAT 59.320 55.000 12.29 0.00 0.00 1.73
2374 2887 0.396695 AGAATCGGTCCGGGCTCTAA 60.397 55.000 12.29 0.00 0.00 2.10
2375 2888 0.475475 TAGAATCGGTCCGGGCTCTA 59.525 55.000 12.29 11.82 0.00 2.43
2376 2889 0.396695 TTAGAATCGGTCCGGGCTCT 60.397 55.000 12.29 12.78 0.00 4.09
2377 2890 0.032267 CTTAGAATCGGTCCGGGCTC 59.968 60.000 12.29 5.78 0.00 4.70
2378 2891 0.686769 ACTTAGAATCGGTCCGGGCT 60.687 55.000 12.29 8.88 0.00 5.19
2379 2892 0.249363 GACTTAGAATCGGTCCGGGC 60.249 60.000 12.29 0.00 0.00 6.13
2380 2893 0.388294 GGACTTAGAATCGGTCCGGG 59.612 60.000 12.29 0.00 39.80 5.73
2381 2894 3.961576 GGACTTAGAATCGGTCCGG 57.038 57.895 12.29 0.00 39.80 5.14
2383 2896 0.745468 AGCGGACTTAGAATCGGTCC 59.255 55.000 11.08 11.08 44.16 4.46
2384 2897 2.580966 AAGCGGACTTAGAATCGGTC 57.419 50.000 0.00 0.00 33.13 4.79
2385 2898 3.000727 CAAAAGCGGACTTAGAATCGGT 58.999 45.455 0.00 0.00 34.05 4.69
2386 2899 3.062234 GTCAAAAGCGGACTTAGAATCGG 59.938 47.826 0.00 0.00 34.05 4.18
2387 2900 3.062234 GGTCAAAAGCGGACTTAGAATCG 59.938 47.826 0.00 0.00 34.05 3.34
2388 2901 4.000988 TGGTCAAAAGCGGACTTAGAATC 58.999 43.478 0.00 0.00 34.05 2.52
2389 2902 4.015872 TGGTCAAAAGCGGACTTAGAAT 57.984 40.909 0.00 0.00 34.05 2.40
2390 2903 3.478857 TGGTCAAAAGCGGACTTAGAA 57.521 42.857 0.00 0.00 34.05 2.10
2391 2904 3.596214 GATGGTCAAAAGCGGACTTAGA 58.404 45.455 0.00 0.00 34.05 2.10
2392 2905 2.678336 GGATGGTCAAAAGCGGACTTAG 59.322 50.000 0.00 0.00 34.05 2.18
2393 2906 2.304761 AGGATGGTCAAAAGCGGACTTA 59.695 45.455 0.00 0.00 34.05 2.24
2394 2907 1.073923 AGGATGGTCAAAAGCGGACTT 59.926 47.619 0.00 0.00 37.90 3.01
2395 2908 0.693049 AGGATGGTCAAAAGCGGACT 59.307 50.000 0.00 0.00 35.61 3.85
2396 2909 0.804989 CAGGATGGTCAAAAGCGGAC 59.195 55.000 0.00 0.00 34.52 4.79
2397 2910 0.690192 TCAGGATGGTCAAAAGCGGA 59.310 50.000 0.00 0.00 36.16 5.54
2398 2911 0.804989 GTCAGGATGGTCAAAAGCGG 59.195 55.000 0.00 0.00 36.16 5.52
2399 2912 0.804989 GGTCAGGATGGTCAAAAGCG 59.195 55.000 0.00 0.00 36.16 4.68
2400 2913 1.177401 GGGTCAGGATGGTCAAAAGC 58.823 55.000 0.00 0.00 36.16 3.51
2401 2914 2.162681 GTGGGTCAGGATGGTCAAAAG 58.837 52.381 0.00 0.00 36.16 2.27
2402 2915 1.203001 GGTGGGTCAGGATGGTCAAAA 60.203 52.381 0.00 0.00 36.16 2.44
2403 2916 0.404040 GGTGGGTCAGGATGGTCAAA 59.596 55.000 0.00 0.00 36.16 2.69
2404 2917 0.770166 TGGTGGGTCAGGATGGTCAA 60.770 55.000 0.00 0.00 36.16 3.18
2405 2918 0.770166 TTGGTGGGTCAGGATGGTCA 60.770 55.000 0.00 0.00 36.16 4.02
2406 2919 0.404040 TTTGGTGGGTCAGGATGGTC 59.596 55.000 0.00 0.00 36.16 4.02
2407 2920 0.856982 TTTTGGTGGGTCAGGATGGT 59.143 50.000 0.00 0.00 36.16 3.55
2408 2921 1.618343 GTTTTTGGTGGGTCAGGATGG 59.382 52.381 0.00 0.00 36.16 3.51
2409 2922 1.618343 GGTTTTTGGTGGGTCAGGATG 59.382 52.381 0.00 0.00 37.54 3.51
2410 2923 1.503347 AGGTTTTTGGTGGGTCAGGAT 59.497 47.619 0.00 0.00 0.00 3.24
2411 2924 0.930726 AGGTTTTTGGTGGGTCAGGA 59.069 50.000 0.00 0.00 0.00 3.86
2412 2925 1.133482 AGAGGTTTTTGGTGGGTCAGG 60.133 52.381 0.00 0.00 0.00 3.86
2413 2926 2.364972 AGAGGTTTTTGGTGGGTCAG 57.635 50.000 0.00 0.00 0.00 3.51
2414 2927 2.158579 GGTAGAGGTTTTTGGTGGGTCA 60.159 50.000 0.00 0.00 0.00 4.02
2415 2928 2.511659 GGTAGAGGTTTTTGGTGGGTC 58.488 52.381 0.00 0.00 0.00 4.46
2416 2929 1.146359 GGGTAGAGGTTTTTGGTGGGT 59.854 52.381 0.00 0.00 0.00 4.51
2417 2930 1.427753 AGGGTAGAGGTTTTTGGTGGG 59.572 52.381 0.00 0.00 0.00 4.61
2418 2931 2.971901 AGGGTAGAGGTTTTTGGTGG 57.028 50.000 0.00 0.00 0.00 4.61
2419 2932 3.572682 GGAAAGGGTAGAGGTTTTTGGTG 59.427 47.826 0.00 0.00 0.00 4.17
2420 2933 3.437491 GGGAAAGGGTAGAGGTTTTTGGT 60.437 47.826 0.00 0.00 0.00 3.67
2421 2934 3.162666 GGGAAAGGGTAGAGGTTTTTGG 58.837 50.000 0.00 0.00 0.00 3.28
2422 2935 2.817844 CGGGAAAGGGTAGAGGTTTTTG 59.182 50.000 0.00 0.00 0.00 2.44
2423 2936 2.816712 GCGGGAAAGGGTAGAGGTTTTT 60.817 50.000 0.00 0.00 0.00 1.94
2424 2937 1.271762 GCGGGAAAGGGTAGAGGTTTT 60.272 52.381 0.00 0.00 0.00 2.43
2425 2938 0.327259 GCGGGAAAGGGTAGAGGTTT 59.673 55.000 0.00 0.00 0.00 3.27
2426 2939 1.896122 CGCGGGAAAGGGTAGAGGTT 61.896 60.000 0.00 0.00 0.00 3.50
2427 2940 2.356780 CGCGGGAAAGGGTAGAGGT 61.357 63.158 0.00 0.00 0.00 3.85
2428 2941 2.499685 CGCGGGAAAGGGTAGAGG 59.500 66.667 0.00 0.00 0.00 3.69
2429 2942 2.202892 GCGCGGGAAAGGGTAGAG 60.203 66.667 8.83 0.00 0.00 2.43
2430 2943 4.137872 CGCGCGGGAAAGGGTAGA 62.138 66.667 24.84 0.00 0.00 2.59
2431 2944 3.945304 AACGCGCGGGAAAGGGTAG 62.945 63.158 35.22 1.22 33.10 3.18
2432 2945 3.534054 AAACGCGCGGGAAAGGGTA 62.534 57.895 35.22 0.00 33.10 3.69
2433 2946 4.941309 AAACGCGCGGGAAAGGGT 62.941 61.111 35.22 7.19 34.95 4.34
2434 2947 3.604494 GAAAACGCGCGGGAAAGGG 62.604 63.158 35.22 3.55 0.00 3.95
2435 2948 2.127003 GAAAACGCGCGGGAAAGG 60.127 61.111 35.22 4.42 0.00 3.11
2436 2949 1.440353 CTGAAAACGCGCGGGAAAG 60.440 57.895 35.22 19.73 0.00 2.62
2437 2950 1.716826 AACTGAAAACGCGCGGGAAA 61.717 50.000 35.22 14.24 0.00 3.13
2438 2951 1.716826 AAACTGAAAACGCGCGGGAA 61.717 50.000 35.22 13.48 0.00 3.97
2439 2952 2.181521 AAACTGAAAACGCGCGGGA 61.182 52.632 35.22 11.40 0.00 5.14
2440 2953 2.008697 CAAACTGAAAACGCGCGGG 61.009 57.895 35.22 22.69 0.00 6.13
2441 2954 2.635305 GCAAACTGAAAACGCGCGG 61.635 57.895 35.22 17.49 0.00 6.46
2442 2955 2.829834 GCAAACTGAAAACGCGCG 59.170 55.556 30.96 30.96 0.00 6.86
2443 2956 2.829834 CGCAAACTGAAAACGCGC 59.170 55.556 5.73 0.00 39.43 6.86
2446 2959 2.008697 CGGGCGCAAACTGAAAACG 61.009 57.895 10.83 0.00 0.00 3.60
2447 2960 2.300066 GCGGGCGCAAACTGAAAAC 61.300 57.895 10.83 0.00 41.49 2.43
2448 2961 2.026879 GCGGGCGCAAACTGAAAA 59.973 55.556 10.83 0.00 41.49 2.29
2464 2977 2.748166 GCTCTAGCTGGGCATGAATGC 61.748 57.143 6.73 6.73 44.67 3.56
2465 2978 1.236628 GCTCTAGCTGGGCATGAATG 58.763 55.000 0.00 0.00 38.21 2.67
2466 2979 0.250209 CGCTCTAGCTGGGCATGAAT 60.250 55.000 0.00 0.00 39.32 2.57
2467 2980 1.144716 CGCTCTAGCTGGGCATGAA 59.855 57.895 0.00 0.00 39.32 2.57
2468 2981 2.800541 CCGCTCTAGCTGGGCATGA 61.801 63.158 0.00 0.00 39.32 3.07
2469 2982 2.280660 CCGCTCTAGCTGGGCATG 60.281 66.667 0.00 0.00 39.32 4.06
2470 2983 2.444706 TCCGCTCTAGCTGGGCAT 60.445 61.111 0.00 0.00 39.32 4.40
2471 2984 3.461773 GTCCGCTCTAGCTGGGCA 61.462 66.667 10.99 0.00 38.52 5.36
2472 2985 4.577246 CGTCCGCTCTAGCTGGGC 62.577 72.222 0.00 9.26 39.32 5.36
2473 2986 4.577246 GCGTCCGCTCTAGCTGGG 62.577 72.222 4.10 2.20 39.32 4.45
2474 2987 4.914420 CGCGTCCGCTCTAGCTGG 62.914 72.222 10.21 0.00 39.32 4.85
2475 2988 4.914420 CCGCGTCCGCTCTAGCTG 62.914 72.222 4.92 0.00 39.32 4.24
2504 3017 2.872337 GAAAAGCTTCCATGCCGGCG 62.872 60.000 23.90 8.36 33.14 6.46
2505 3018 1.153765 GAAAAGCTTCCATGCCGGC 60.154 57.895 22.73 22.73 33.14 6.13
2506 3019 1.137404 CGAAAAGCTTCCATGCCGG 59.863 57.895 0.00 0.00 0.00 6.13
2507 3020 1.137404 CCGAAAAGCTTCCATGCCG 59.863 57.895 0.00 0.00 0.00 5.69
2508 3021 0.109132 CACCGAAAAGCTTCCATGCC 60.109 55.000 0.00 0.00 0.00 4.40
2509 3022 0.733909 GCACCGAAAAGCTTCCATGC 60.734 55.000 0.00 2.35 33.91 4.06
2510 3023 0.597568 TGCACCGAAAAGCTTCCATG 59.402 50.000 0.00 0.00 0.00 3.66
2511 3024 0.883833 CTGCACCGAAAAGCTTCCAT 59.116 50.000 0.00 0.00 0.00 3.41
2512 3025 1.172180 CCTGCACCGAAAAGCTTCCA 61.172 55.000 0.00 0.00 0.00 3.53
2513 3026 1.581447 CCTGCACCGAAAAGCTTCC 59.419 57.895 0.00 0.00 0.00 3.46
2514 3027 1.081175 GCCTGCACCGAAAAGCTTC 60.081 57.895 0.00 0.00 0.00 3.86
2515 3028 2.908073 CGCCTGCACCGAAAAGCTT 61.908 57.895 0.00 0.00 0.00 3.74
2516 3029 3.357079 CGCCTGCACCGAAAAGCT 61.357 61.111 0.00 0.00 0.00 3.74
2517 3030 3.353836 TCGCCTGCACCGAAAAGC 61.354 61.111 2.48 0.00 0.00 3.51
2518 3031 2.556287 GTCGCCTGCACCGAAAAG 59.444 61.111 6.31 0.00 36.36 2.27
2519 3032 2.975799 GGTCGCCTGCACCGAAAA 60.976 61.111 6.31 0.00 36.36 2.29
2532 3045 2.986260 TTTAAACGCGCGACGGTCG 61.986 57.895 39.36 25.18 44.78 4.79
2533 3046 1.505666 GTTTAAACGCGCGACGGTC 60.506 57.895 39.36 17.34 44.78 4.79
2544 3057 0.111134 GGCCGTCGTGTCGTTTAAAC 60.111 55.000 8.35 8.35 0.00 2.01
2545 3058 1.547292 CGGCCGTCGTGTCGTTTAAA 61.547 55.000 19.50 0.00 0.00 1.52
2546 3059 2.015627 CGGCCGTCGTGTCGTTTAA 61.016 57.895 19.50 0.00 0.00 1.52
2547 3060 2.428902 CGGCCGTCGTGTCGTTTA 60.429 61.111 19.50 0.00 0.00 2.01
2584 3097 2.491152 GTGTGCCATCAATGCGGG 59.509 61.111 0.00 0.00 0.00 6.13
2585 3098 2.100797 CGTGTGCCATCAATGCGG 59.899 61.111 0.00 0.00 0.00 5.69
2586 3099 2.100797 CCGTGTGCCATCAATGCG 59.899 61.111 0.00 0.00 0.00 4.73
2587 3100 0.733566 CAACCGTGTGCCATCAATGC 60.734 55.000 0.00 0.00 0.00 3.56
2588 3101 0.733566 GCAACCGTGTGCCATCAATG 60.734 55.000 0.00 0.00 38.66 2.82
2589 3102 1.586028 GCAACCGTGTGCCATCAAT 59.414 52.632 0.00 0.00 38.66 2.57
2590 3103 3.038280 GCAACCGTGTGCCATCAA 58.962 55.556 0.00 0.00 38.66 2.57
2602 3115 2.436824 GGAGAAGCCTCGGCAACC 60.437 66.667 11.02 4.13 44.88 3.77
2603 3116 2.665603 AGGAGAAGCCTCGGCAAC 59.334 61.111 11.02 3.65 46.97 4.17
2612 3125 3.760035 TGGCGTCGGAGGAGAAGC 61.760 66.667 1.18 0.00 43.24 3.86
2613 3126 2.182030 GTGGCGTCGGAGGAGAAG 59.818 66.667 1.18 0.00 0.00 2.85
2614 3127 2.599281 TGTGGCGTCGGAGGAGAA 60.599 61.111 1.18 0.00 0.00 2.87
2615 3128 3.371063 GTGTGGCGTCGGAGGAGA 61.371 66.667 1.18 0.00 0.00 3.71
2616 3129 2.890847 GATGTGTGGCGTCGGAGGAG 62.891 65.000 1.18 0.00 0.00 3.69
2617 3130 2.994995 ATGTGTGGCGTCGGAGGA 60.995 61.111 1.18 0.00 0.00 3.71
2618 3131 2.509336 GATGTGTGGCGTCGGAGG 60.509 66.667 0.00 0.00 0.00 4.30
2619 3132 2.509336 GGATGTGTGGCGTCGGAG 60.509 66.667 0.00 0.00 33.98 4.63
2620 3133 4.429212 CGGATGTGTGGCGTCGGA 62.429 66.667 0.00 0.00 36.04 4.55
2621 3134 4.735132 ACGGATGTGTGGCGTCGG 62.735 66.667 0.00 0.00 38.79 4.79
2622 3135 3.179265 GACGGATGTGTGGCGTCG 61.179 66.667 0.00 0.00 33.98 5.12
2623 3136 2.813908 GGACGGATGTGTGGCGTC 60.814 66.667 0.00 0.00 0.00 5.19
2624 3137 4.388499 GGGACGGATGTGTGGCGT 62.388 66.667 0.00 0.00 0.00 5.68
2625 3138 4.082523 AGGGACGGATGTGTGGCG 62.083 66.667 0.00 0.00 0.00 5.69
2626 3139 2.125106 GAGGGACGGATGTGTGGC 60.125 66.667 0.00 0.00 0.00 5.01
2627 3140 1.219124 CAGAGGGACGGATGTGTGG 59.781 63.158 0.00 0.00 0.00 4.17
2628 3141 0.108615 GACAGAGGGACGGATGTGTG 60.109 60.000 0.00 0.00 0.00 3.82
2629 3142 2.277858 GACAGAGGGACGGATGTGT 58.722 57.895 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.