Multiple sequence alignment - TraesCS2A01G339300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G339300 | chr2A | 100.000 | 2309 | 0 | 0 | 1 | 2309 | 573368291 | 573365983 | 0.000000e+00 | 4265 |
1 | TraesCS2A01G339300 | chr2A | 90.426 | 282 | 27 | 0 | 1863 | 2144 | 722516282 | 722516001 | 2.800000e-99 | 372 |
2 | TraesCS2A01G339300 | chr2B | 90.116 | 1720 | 65 | 29 | 6 | 1660 | 488867792 | 488869471 | 0.000000e+00 | 2137 |
3 | TraesCS2A01G339300 | chr2B | 92.391 | 184 | 12 | 2 | 1687 | 1868 | 488869599 | 488869782 | 6.330000e-66 | 261 |
4 | TraesCS2A01G339300 | chr2D | 92.564 | 901 | 49 | 5 | 978 | 1861 | 416861653 | 416862552 | 0.000000e+00 | 1277 |
5 | TraesCS2A01G339300 | chr2D | 85.756 | 1032 | 34 | 38 | 3 | 962 | 416860608 | 416861598 | 0.000000e+00 | 987 |
6 | TraesCS2A01G339300 | chr3A | 94.161 | 274 | 16 | 0 | 1868 | 2141 | 437663475 | 437663748 | 3.550000e-113 | 418 |
7 | TraesCS2A01G339300 | chr4B | 92.446 | 278 | 19 | 2 | 1866 | 2143 | 325992704 | 325992429 | 1.660000e-106 | 396 |
8 | TraesCS2A01G339300 | chr5B | 91.667 | 276 | 23 | 0 | 1866 | 2141 | 332325397 | 332325122 | 1.290000e-102 | 383 |
9 | TraesCS2A01G339300 | chr5B | 91.007 | 278 | 23 | 2 | 1864 | 2141 | 320411188 | 320410913 | 7.790000e-100 | 374 |
10 | TraesCS2A01G339300 | chr1B | 91.039 | 279 | 25 | 0 | 1866 | 2144 | 547278670 | 547278948 | 6.020000e-101 | 377 |
11 | TraesCS2A01G339300 | chr7A | 91.209 | 273 | 24 | 0 | 1869 | 2141 | 208528427 | 208528155 | 2.800000e-99 | 372 |
12 | TraesCS2A01G339300 | chr4A | 90.141 | 284 | 28 | 0 | 1862 | 2145 | 445073028 | 445072745 | 1.010000e-98 | 370 |
13 | TraesCS2A01G339300 | chr3B | 90.876 | 274 | 25 | 0 | 1868 | 2141 | 365497790 | 365498063 | 3.620000e-98 | 368 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G339300 | chr2A | 573365983 | 573368291 | 2308 | True | 4265 | 4265 | 100.0000 | 1 | 2309 | 1 | chr2A.!!$R1 | 2308 |
1 | TraesCS2A01G339300 | chr2B | 488867792 | 488869782 | 1990 | False | 1199 | 2137 | 91.2535 | 6 | 1868 | 2 | chr2B.!!$F1 | 1862 |
2 | TraesCS2A01G339300 | chr2D | 416860608 | 416862552 | 1944 | False | 1132 | 1277 | 89.1600 | 3 | 1861 | 2 | chr2D.!!$F1 | 1858 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
750 | 829 | 0.170116 | GTTGGGTGTGTGTGTGTGTG | 59.83 | 55.0 | 0.0 | 0.0 | 0.0 | 3.82 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2145 | 2391 | 0.242017 | ACGAGCGGTGTGGTACTAAC | 59.758 | 55.0 | 0.0 | 0.0 | 0.0 | 2.34 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
83 | 84 | 1.873295 | CGCGCTTTAAGTTAAACCGG | 58.127 | 50.000 | 19.48 | 0.00 | 29.88 | 5.28 |
91 | 92 | 5.716094 | CTTTAAGTTAAACCGGGGGATTTG | 58.284 | 41.667 | 6.32 | 0.00 | 0.00 | 2.32 |
112 | 113 | 1.200252 | GGAAAGAGAAAGCGAAAGGGC | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
146 | 147 | 4.374702 | CAGCGGCAACAGCGTGAC | 62.375 | 66.667 | 1.45 | 0.00 | 40.31 | 3.67 |
205 | 224 | 1.750399 | CCCCACTCAATCCAAGGCG | 60.750 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
254 | 294 | 1.928706 | GAACATAAAGCGGCGGCCAA | 61.929 | 55.000 | 20.71 | 0.00 | 41.24 | 4.52 |
342 | 386 | 4.390556 | AGCCGTGCTCCTCCTCCT | 62.391 | 66.667 | 0.00 | 0.00 | 30.62 | 3.69 |
343 | 387 | 3.844090 | GCCGTGCTCCTCCTCCTC | 61.844 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
344 | 388 | 3.151022 | CCGTGCTCCTCCTCCTCC | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
345 | 389 | 2.043450 | CGTGCTCCTCCTCCTCCT | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
346 | 390 | 2.124693 | CGTGCTCCTCCTCCTCCTC | 61.125 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
347 | 391 | 1.760480 | GTGCTCCTCCTCCTCCTCC | 60.760 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
348 | 392 | 1.938596 | TGCTCCTCCTCCTCCTCCT | 60.939 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
444 | 490 | 3.251004 | ACAACAAAAGACGAGAAGATGGC | 59.749 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
464 | 510 | 1.690845 | CCTCCACTCTACAGCTCCCAT | 60.691 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
481 | 527 | 1.765314 | CCATGCTCCAAGGCTAGTAGT | 59.235 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
482 | 528 | 2.965831 | CCATGCTCCAAGGCTAGTAGTA | 59.034 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
483 | 529 | 3.243907 | CCATGCTCCAAGGCTAGTAGTAC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 2.73 |
484 | 530 | 3.383698 | TGCTCCAAGGCTAGTAGTACT | 57.616 | 47.619 | 8.14 | 8.14 | 0.00 | 2.73 |
485 | 531 | 4.515028 | TGCTCCAAGGCTAGTAGTACTA | 57.485 | 45.455 | 9.66 | 9.66 | 0.00 | 1.82 |
486 | 532 | 4.205587 | TGCTCCAAGGCTAGTAGTACTAC | 58.794 | 47.826 | 23.03 | 23.03 | 36.35 | 2.73 |
591 | 643 | 4.337060 | TGGTCACGGTCACGCTCG | 62.337 | 66.667 | 0.00 | 0.00 | 46.04 | 5.03 |
662 | 714 | 0.957362 | CGGAAGATACCTCGGTACCC | 59.043 | 60.000 | 6.25 | 0.00 | 33.01 | 3.69 |
744 | 823 | 1.318886 | TGCCTTGTTGGGTGTGTGTG | 61.319 | 55.000 | 0.00 | 0.00 | 36.00 | 3.82 |
745 | 824 | 1.319614 | GCCTTGTTGGGTGTGTGTGT | 61.320 | 55.000 | 0.00 | 0.00 | 36.00 | 3.72 |
746 | 825 | 0.455410 | CCTTGTTGGGTGTGTGTGTG | 59.545 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
747 | 826 | 1.173043 | CTTGTTGGGTGTGTGTGTGT | 58.827 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
748 | 827 | 0.884514 | TTGTTGGGTGTGTGTGTGTG | 59.115 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
749 | 828 | 0.250945 | TGTTGGGTGTGTGTGTGTGT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
750 | 829 | 0.170116 | GTTGGGTGTGTGTGTGTGTG | 59.830 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
751 | 830 | 0.250945 | TTGGGTGTGTGTGTGTGTGT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
788 | 869 | 5.612725 | ATCTCCCTCTCTTTGAGCTTTAG | 57.387 | 43.478 | 0.00 | 0.00 | 41.35 | 1.85 |
805 | 886 | 4.674362 | GCTTTAGTTTATGCCTTTGGACCG | 60.674 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
825 | 906 | 1.227176 | GATCTTACCCGTCACCCGC | 60.227 | 63.158 | 0.00 | 0.00 | 34.38 | 6.13 |
995 | 1136 | 2.820787 | ACTCACACACTAGCTAGGACAC | 59.179 | 50.000 | 24.35 | 0.00 | 0.00 | 3.67 |
1237 | 1378 | 3.132139 | CTTCTCCGCCTCCGACGA | 61.132 | 66.667 | 0.00 | 0.00 | 36.29 | 4.20 |
1339 | 1480 | 1.559682 | GACCAAATGAGGGCCAGACTA | 59.440 | 52.381 | 6.18 | 0.00 | 0.00 | 2.59 |
1397 | 1539 | 6.220201 | CCTCTCGTTTTCTTCTTCTTCTTCT | 58.780 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1411 | 1553 | 4.359706 | TCTTCTTCTTTTGGCGCTTTTTC | 58.640 | 39.130 | 7.64 | 0.00 | 0.00 | 2.29 |
1422 | 1564 | 1.613925 | GCGCTTTTTCTTTCCCCTCTT | 59.386 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
1427 | 1569 | 5.050490 | GCTTTTTCTTTCCCCTCTTTTGAC | 58.950 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
1450 | 1592 | 2.762535 | TGAGTCGTTCCATTCCTTCC | 57.237 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1532 | 1674 | 4.680110 | GCGCATGTGTACCTACTACTTATG | 59.320 | 45.833 | 0.30 | 0.00 | 0.00 | 1.90 |
1539 | 1681 | 8.640063 | TGTGTACCTACTACTTATGACTTGAA | 57.360 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
1592 | 1734 | 6.851330 | ACGTACGTAACTCAGTTTTACAGTAC | 59.149 | 38.462 | 21.41 | 5.66 | 36.85 | 2.73 |
1593 | 1735 | 6.030385 | CGTACGTAACTCAGTTTTACAGTACG | 59.970 | 42.308 | 20.56 | 20.56 | 44.38 | 3.67 |
1818 | 2064 | 2.289382 | TGACAATCAACAGCTTAGCCGA | 60.289 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
1842 | 2088 | 1.621301 | CTGAAGACGAGCACGCTTGG | 61.621 | 60.000 | 15.15 | 0.80 | 43.96 | 3.61 |
1868 | 2114 | 4.230657 | CGCTGCCTGCTACTAGTATTTAG | 58.769 | 47.826 | 2.33 | 2.58 | 40.11 | 1.85 |
1869 | 2115 | 4.561105 | GCTGCCTGCTACTAGTATTTAGG | 58.439 | 47.826 | 16.92 | 16.92 | 38.95 | 2.69 |
1870 | 2116 | 4.561734 | GCTGCCTGCTACTAGTATTTAGGG | 60.562 | 50.000 | 20.21 | 12.71 | 38.95 | 3.53 |
1871 | 2117 | 3.323979 | TGCCTGCTACTAGTATTTAGGGC | 59.676 | 47.826 | 20.21 | 18.96 | 36.75 | 5.19 |
1872 | 2118 | 3.323979 | GCCTGCTACTAGTATTTAGGGCA | 59.676 | 47.826 | 20.21 | 15.98 | 36.31 | 5.36 |
1873 | 2119 | 4.020128 | GCCTGCTACTAGTATTTAGGGCAT | 60.020 | 45.833 | 20.21 | 0.00 | 36.31 | 4.40 |
1874 | 2120 | 5.482908 | CCTGCTACTAGTATTTAGGGCATG | 58.517 | 45.833 | 11.36 | 6.58 | 31.27 | 4.06 |
1875 | 2121 | 5.012148 | CCTGCTACTAGTATTTAGGGCATGT | 59.988 | 44.000 | 11.36 | 0.00 | 31.27 | 3.21 |
1876 | 2122 | 6.210784 | CCTGCTACTAGTATTTAGGGCATGTA | 59.789 | 42.308 | 11.36 | 0.00 | 31.27 | 2.29 |
1877 | 2123 | 6.989659 | TGCTACTAGTATTTAGGGCATGTAC | 58.010 | 40.000 | 2.33 | 0.00 | 0.00 | 2.90 |
1878 | 2124 | 6.551975 | TGCTACTAGTATTTAGGGCATGTACA | 59.448 | 38.462 | 2.33 | 0.00 | 0.00 | 2.90 |
1879 | 2125 | 7.070198 | TGCTACTAGTATTTAGGGCATGTACAA | 59.930 | 37.037 | 2.33 | 0.00 | 0.00 | 2.41 |
1880 | 2126 | 8.095169 | GCTACTAGTATTTAGGGCATGTACAAT | 58.905 | 37.037 | 2.33 | 0.00 | 0.00 | 2.71 |
1881 | 2127 | 9.424319 | CTACTAGTATTTAGGGCATGTACAATG | 57.576 | 37.037 | 2.33 | 0.12 | 0.00 | 2.82 |
1882 | 2128 | 8.029782 | ACTAGTATTTAGGGCATGTACAATGA | 57.970 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
1883 | 2129 | 8.660435 | ACTAGTATTTAGGGCATGTACAATGAT | 58.340 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
1884 | 2130 | 7.750229 | AGTATTTAGGGCATGTACAATGATG | 57.250 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
1885 | 2131 | 4.916983 | TTTAGGGCATGTACAATGATGC | 57.083 | 40.909 | 10.12 | 10.12 | 43.60 | 3.91 |
1886 | 2132 | 2.742428 | AGGGCATGTACAATGATGCT | 57.258 | 45.000 | 16.47 | 0.00 | 43.77 | 3.79 |
1887 | 2133 | 3.862877 | AGGGCATGTACAATGATGCTA | 57.137 | 42.857 | 16.47 | 0.00 | 43.77 | 3.49 |
1888 | 2134 | 4.377762 | AGGGCATGTACAATGATGCTAT | 57.622 | 40.909 | 16.47 | 5.35 | 43.77 | 2.97 |
1889 | 2135 | 4.330250 | AGGGCATGTACAATGATGCTATC | 58.670 | 43.478 | 16.47 | 8.57 | 43.77 | 2.08 |
1890 | 2136 | 4.042560 | AGGGCATGTACAATGATGCTATCT | 59.957 | 41.667 | 16.47 | 10.22 | 43.77 | 1.98 |
1891 | 2137 | 4.763793 | GGGCATGTACAATGATGCTATCTT | 59.236 | 41.667 | 16.47 | 0.00 | 43.77 | 2.40 |
1892 | 2138 | 5.939883 | GGGCATGTACAATGATGCTATCTTA | 59.060 | 40.000 | 16.47 | 0.00 | 43.77 | 2.10 |
1893 | 2139 | 6.093219 | GGGCATGTACAATGATGCTATCTTAG | 59.907 | 42.308 | 16.47 | 0.00 | 43.77 | 2.18 |
1894 | 2140 | 6.875726 | GGCATGTACAATGATGCTATCTTAGA | 59.124 | 38.462 | 16.47 | 0.00 | 43.77 | 2.10 |
1895 | 2141 | 7.388776 | GGCATGTACAATGATGCTATCTTAGAA | 59.611 | 37.037 | 16.47 | 0.00 | 43.77 | 2.10 |
1896 | 2142 | 8.441608 | GCATGTACAATGATGCTATCTTAGAAG | 58.558 | 37.037 | 11.12 | 0.00 | 41.52 | 2.85 |
1897 | 2143 | 9.486497 | CATGTACAATGATGCTATCTTAGAAGT | 57.514 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
1898 | 2144 | 8.877808 | TGTACAATGATGCTATCTTAGAAGTG | 57.122 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
1899 | 2145 | 8.478066 | TGTACAATGATGCTATCTTAGAAGTGT | 58.522 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
1900 | 2146 | 8.973378 | GTACAATGATGCTATCTTAGAAGTGTC | 58.027 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
1901 | 2147 | 7.559486 | ACAATGATGCTATCTTAGAAGTGTCA | 58.441 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
1902 | 2148 | 7.493971 | ACAATGATGCTATCTTAGAAGTGTCAC | 59.506 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
1903 | 2149 | 6.530019 | TGATGCTATCTTAGAAGTGTCACA | 57.470 | 37.500 | 5.62 | 0.00 | 0.00 | 3.58 |
1904 | 2150 | 7.117285 | TGATGCTATCTTAGAAGTGTCACAT | 57.883 | 36.000 | 5.62 | 0.00 | 0.00 | 3.21 |
1905 | 2151 | 8.237811 | TGATGCTATCTTAGAAGTGTCACATA | 57.762 | 34.615 | 5.62 | 0.00 | 0.00 | 2.29 |
1906 | 2152 | 8.355913 | TGATGCTATCTTAGAAGTGTCACATAG | 58.644 | 37.037 | 5.62 | 3.20 | 0.00 | 2.23 |
1907 | 2153 | 7.043961 | TGCTATCTTAGAAGTGTCACATAGG | 57.956 | 40.000 | 5.62 | 0.00 | 0.00 | 2.57 |
1908 | 2154 | 6.833933 | TGCTATCTTAGAAGTGTCACATAGGA | 59.166 | 38.462 | 5.62 | 0.53 | 0.00 | 2.94 |
1909 | 2155 | 7.507277 | TGCTATCTTAGAAGTGTCACATAGGAT | 59.493 | 37.037 | 5.62 | 8.70 | 0.00 | 3.24 |
1910 | 2156 | 9.015367 | GCTATCTTAGAAGTGTCACATAGGATA | 57.985 | 37.037 | 5.62 | 9.29 | 0.00 | 2.59 |
1914 | 2160 | 8.188799 | TCTTAGAAGTGTCACATAGGATAAACG | 58.811 | 37.037 | 5.62 | 0.00 | 0.00 | 3.60 |
1915 | 2161 | 6.525578 | AGAAGTGTCACATAGGATAAACGA | 57.474 | 37.500 | 5.62 | 0.00 | 0.00 | 3.85 |
1916 | 2162 | 7.113658 | AGAAGTGTCACATAGGATAAACGAT | 57.886 | 36.000 | 5.62 | 0.00 | 0.00 | 3.73 |
1917 | 2163 | 6.980978 | AGAAGTGTCACATAGGATAAACGATG | 59.019 | 38.462 | 5.62 | 0.00 | 0.00 | 3.84 |
1918 | 2164 | 6.465439 | AGTGTCACATAGGATAAACGATGA | 57.535 | 37.500 | 5.62 | 0.00 | 0.00 | 2.92 |
1919 | 2165 | 6.507900 | AGTGTCACATAGGATAAACGATGAG | 58.492 | 40.000 | 5.62 | 0.00 | 0.00 | 2.90 |
1920 | 2166 | 5.692204 | GTGTCACATAGGATAAACGATGAGG | 59.308 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1921 | 2167 | 5.362717 | TGTCACATAGGATAAACGATGAGGT | 59.637 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1922 | 2168 | 5.692204 | GTCACATAGGATAAACGATGAGGTG | 59.308 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1923 | 2169 | 5.596772 | TCACATAGGATAAACGATGAGGTGA | 59.403 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1924 | 2170 | 6.097696 | TCACATAGGATAAACGATGAGGTGAA | 59.902 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
1925 | 2171 | 6.422100 | CACATAGGATAAACGATGAGGTGAAG | 59.578 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
1926 | 2172 | 4.408182 | AGGATAAACGATGAGGTGAAGG | 57.592 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
1927 | 2173 | 4.030913 | AGGATAAACGATGAGGTGAAGGA | 58.969 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
1928 | 2174 | 4.100189 | AGGATAAACGATGAGGTGAAGGAG | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
1929 | 2175 | 4.099573 | GGATAAACGATGAGGTGAAGGAGA | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
1930 | 2176 | 3.601443 | AAACGATGAGGTGAAGGAGAG | 57.399 | 47.619 | 0.00 | 0.00 | 0.00 | 3.20 |
1931 | 2177 | 2.516227 | ACGATGAGGTGAAGGAGAGA | 57.484 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1932 | 2178 | 2.374184 | ACGATGAGGTGAAGGAGAGAG | 58.626 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
1933 | 2179 | 2.025793 | ACGATGAGGTGAAGGAGAGAGA | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1934 | 2180 | 3.020274 | CGATGAGGTGAAGGAGAGAGAA | 58.980 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1935 | 2181 | 3.066621 | CGATGAGGTGAAGGAGAGAGAAG | 59.933 | 52.174 | 0.00 | 0.00 | 0.00 | 2.85 |
1936 | 2182 | 3.534357 | TGAGGTGAAGGAGAGAGAAGT | 57.466 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
1937 | 2183 | 3.426615 | TGAGGTGAAGGAGAGAGAAGTC | 58.573 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1938 | 2184 | 3.075283 | TGAGGTGAAGGAGAGAGAAGTCT | 59.925 | 47.826 | 0.00 | 0.00 | 34.86 | 3.24 |
1939 | 2185 | 4.086457 | GAGGTGAAGGAGAGAGAAGTCTT | 58.914 | 47.826 | 0.00 | 0.00 | 30.97 | 3.01 |
1940 | 2186 | 5.222151 | TGAGGTGAAGGAGAGAGAAGTCTTA | 60.222 | 44.000 | 0.00 | 0.00 | 30.97 | 2.10 |
1941 | 2187 | 5.646215 | AGGTGAAGGAGAGAGAAGTCTTAA | 58.354 | 41.667 | 0.00 | 0.00 | 30.97 | 1.85 |
1942 | 2188 | 6.078664 | AGGTGAAGGAGAGAGAAGTCTTAAA | 58.921 | 40.000 | 0.00 | 0.00 | 30.97 | 1.52 |
1943 | 2189 | 6.555360 | AGGTGAAGGAGAGAGAAGTCTTAAAA | 59.445 | 38.462 | 0.00 | 0.00 | 30.97 | 1.52 |
1944 | 2190 | 7.071321 | AGGTGAAGGAGAGAGAAGTCTTAAAAA | 59.929 | 37.037 | 0.00 | 0.00 | 30.97 | 1.94 |
2003 | 2249 | 8.700722 | GAGGTGATCTCTTAGCATAATATGTG | 57.299 | 38.462 | 1.92 | 0.00 | 39.38 | 3.21 |
2004 | 2250 | 8.200024 | AGGTGATCTCTTAGCATAATATGTGT | 57.800 | 34.615 | 1.92 | 0.00 | 0.00 | 3.72 |
2005 | 2251 | 8.310382 | AGGTGATCTCTTAGCATAATATGTGTC | 58.690 | 37.037 | 1.92 | 0.00 | 0.00 | 3.67 |
2006 | 2252 | 8.090831 | GGTGATCTCTTAGCATAATATGTGTCA | 58.909 | 37.037 | 1.92 | 0.00 | 0.00 | 3.58 |
2007 | 2253 | 8.920665 | GTGATCTCTTAGCATAATATGTGTCAC | 58.079 | 37.037 | 1.92 | 0.00 | 0.00 | 3.67 |
2008 | 2254 | 8.090831 | TGATCTCTTAGCATAATATGTGTCACC | 58.909 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
2009 | 2255 | 7.360113 | TCTCTTAGCATAATATGTGTCACCA | 57.640 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2010 | 2256 | 7.966812 | TCTCTTAGCATAATATGTGTCACCAT | 58.033 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
2011 | 2257 | 7.874528 | TCTCTTAGCATAATATGTGTCACCATG | 59.125 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
2012 | 2258 | 7.508687 | TCTTAGCATAATATGTGTCACCATGT | 58.491 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
2013 | 2259 | 7.992608 | TCTTAGCATAATATGTGTCACCATGTT | 59.007 | 33.333 | 0.00 | 2.32 | 32.02 | 2.71 |
2014 | 2260 | 8.518430 | TTAGCATAATATGTGTCACCATGTTT | 57.482 | 30.769 | 0.00 | 0.00 | 30.20 | 2.83 |
2015 | 2261 | 7.408756 | AGCATAATATGTGTCACCATGTTTT | 57.591 | 32.000 | 0.00 | 0.00 | 30.20 | 2.43 |
2016 | 2262 | 7.839907 | AGCATAATATGTGTCACCATGTTTTT | 58.160 | 30.769 | 0.00 | 0.00 | 30.20 | 1.94 |
2017 | 2263 | 8.965819 | AGCATAATATGTGTCACCATGTTTTTA | 58.034 | 29.630 | 0.00 | 0.00 | 30.20 | 1.52 |
2018 | 2264 | 9.236691 | GCATAATATGTGTCACCATGTTTTTAG | 57.763 | 33.333 | 0.00 | 0.00 | 30.20 | 1.85 |
2019 | 2265 | 9.734620 | CATAATATGTGTCACCATGTTTTTAGG | 57.265 | 33.333 | 0.00 | 0.00 | 30.20 | 2.69 |
2020 | 2266 | 9.693739 | ATAATATGTGTCACCATGTTTTTAGGA | 57.306 | 29.630 | 0.00 | 0.00 | 30.20 | 2.94 |
2021 | 2267 | 8.415950 | AATATGTGTCACCATGTTTTTAGGAA | 57.584 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
2022 | 2268 | 6.916360 | ATGTGTCACCATGTTTTTAGGAAT | 57.084 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2023 | 2269 | 6.083098 | TGTGTCACCATGTTTTTAGGAATG | 57.917 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
2024 | 2270 | 5.596361 | TGTGTCACCATGTTTTTAGGAATGT | 59.404 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2025 | 2271 | 6.149633 | GTGTCACCATGTTTTTAGGAATGTC | 58.850 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2026 | 2272 | 6.016276 | GTGTCACCATGTTTTTAGGAATGTCT | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
2027 | 2273 | 7.174253 | GTGTCACCATGTTTTTAGGAATGTCTA | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
2028 | 2274 | 7.390440 | TGTCACCATGTTTTTAGGAATGTCTAG | 59.610 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
2029 | 2275 | 7.390718 | GTCACCATGTTTTTAGGAATGTCTAGT | 59.609 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
2030 | 2276 | 7.942341 | TCACCATGTTTTTAGGAATGTCTAGTT | 59.058 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2031 | 2277 | 9.226606 | CACCATGTTTTTAGGAATGTCTAGTTA | 57.773 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2032 | 2278 | 9.975218 | ACCATGTTTTTAGGAATGTCTAGTTAT | 57.025 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
2044 | 2290 | 8.994170 | GGAATGTCTAGTTATTGAAGATAAGGC | 58.006 | 37.037 | 0.00 | 0.00 | 0.00 | 4.35 |
2045 | 2291 | 9.771534 | GAATGTCTAGTTATTGAAGATAAGGCT | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
2053 | 2299 | 9.995003 | AGTTATTGAAGATAAGGCTAAGAGATG | 57.005 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2054 | 2300 | 9.988815 | GTTATTGAAGATAAGGCTAAGAGATGA | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2055 | 2301 | 9.988815 | TTATTGAAGATAAGGCTAAGAGATGAC | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2056 | 2302 | 6.412362 | TGAAGATAAGGCTAAGAGATGACC | 57.588 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2057 | 2303 | 5.305644 | TGAAGATAAGGCTAAGAGATGACCC | 59.694 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2058 | 2304 | 4.820775 | AGATAAGGCTAAGAGATGACCCA | 58.179 | 43.478 | 0.00 | 0.00 | 0.00 | 4.51 |
2059 | 2305 | 5.410602 | AGATAAGGCTAAGAGATGACCCAT | 58.589 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2060 | 2306 | 5.848921 | AGATAAGGCTAAGAGATGACCCATT | 59.151 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2061 | 2307 | 3.853355 | AGGCTAAGAGATGACCCATTG | 57.147 | 47.619 | 0.00 | 0.00 | 0.00 | 2.82 |
2062 | 2308 | 3.118531 | AGGCTAAGAGATGACCCATTGT | 58.881 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
2063 | 2309 | 4.298626 | AGGCTAAGAGATGACCCATTGTA | 58.701 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
2064 | 2310 | 4.910304 | AGGCTAAGAGATGACCCATTGTAT | 59.090 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2065 | 2311 | 6.084738 | AGGCTAAGAGATGACCCATTGTATA | 58.915 | 40.000 | 0.00 | 0.00 | 0.00 | 1.47 |
2066 | 2312 | 6.014156 | AGGCTAAGAGATGACCCATTGTATAC | 60.014 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
2067 | 2313 | 6.239600 | GGCTAAGAGATGACCCATTGTATACA | 60.240 | 42.308 | 0.08 | 0.08 | 0.00 | 2.29 |
2068 | 2314 | 7.390027 | GCTAAGAGATGACCCATTGTATACAT | 58.610 | 38.462 | 6.36 | 0.00 | 0.00 | 2.29 |
2069 | 2315 | 8.531982 | GCTAAGAGATGACCCATTGTATACATA | 58.468 | 37.037 | 6.36 | 0.00 | 0.00 | 2.29 |
2137 | 2383 | 8.299262 | ACTATCTTATCAATCATTGTACACGC | 57.701 | 34.615 | 0.00 | 0.00 | 0.00 | 5.34 |
2138 | 2384 | 5.984233 | TCTTATCAATCATTGTACACGCC | 57.016 | 39.130 | 0.00 | 0.00 | 0.00 | 5.68 |
2139 | 2385 | 4.814234 | TCTTATCAATCATTGTACACGCCC | 59.186 | 41.667 | 0.00 | 0.00 | 0.00 | 6.13 |
2140 | 2386 | 2.779755 | TCAATCATTGTACACGCCCT | 57.220 | 45.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2141 | 2387 | 3.066291 | TCAATCATTGTACACGCCCTT | 57.934 | 42.857 | 0.00 | 0.00 | 0.00 | 3.95 |
2142 | 2388 | 4.209307 | TCAATCATTGTACACGCCCTTA | 57.791 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
2143 | 2389 | 3.936453 | TCAATCATTGTACACGCCCTTAC | 59.064 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
2144 | 2390 | 3.620427 | ATCATTGTACACGCCCTTACA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
2145 | 2391 | 2.967362 | TCATTGTACACGCCCTTACAG | 58.033 | 47.619 | 0.00 | 0.00 | 30.03 | 2.74 |
2146 | 2392 | 2.300723 | TCATTGTACACGCCCTTACAGT | 59.699 | 45.455 | 0.00 | 0.00 | 30.03 | 3.55 |
2147 | 2393 | 2.914695 | TTGTACACGCCCTTACAGTT | 57.085 | 45.000 | 0.00 | 0.00 | 30.03 | 3.16 |
2148 | 2394 | 4.021280 | TCATTGTACACGCCCTTACAGTTA | 60.021 | 41.667 | 0.00 | 0.00 | 30.03 | 2.24 |
2149 | 2395 | 3.581024 | TGTACACGCCCTTACAGTTAG | 57.419 | 47.619 | 0.00 | 0.00 | 0.00 | 2.34 |
2150 | 2396 | 2.892852 | TGTACACGCCCTTACAGTTAGT | 59.107 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2151 | 2397 | 4.078537 | TGTACACGCCCTTACAGTTAGTA | 58.921 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2152 | 2398 | 3.582714 | ACACGCCCTTACAGTTAGTAC | 57.417 | 47.619 | 0.00 | 0.00 | 30.91 | 2.73 |
2153 | 2399 | 2.232208 | ACACGCCCTTACAGTTAGTACC | 59.768 | 50.000 | 0.00 | 0.00 | 30.91 | 3.34 |
2154 | 2400 | 2.231964 | CACGCCCTTACAGTTAGTACCA | 59.768 | 50.000 | 0.00 | 0.00 | 30.91 | 3.25 |
2155 | 2401 | 2.232208 | ACGCCCTTACAGTTAGTACCAC | 59.768 | 50.000 | 0.00 | 0.00 | 30.91 | 4.16 |
2156 | 2402 | 2.231964 | CGCCCTTACAGTTAGTACCACA | 59.768 | 50.000 | 0.00 | 0.00 | 30.91 | 4.17 |
2157 | 2403 | 3.593096 | GCCCTTACAGTTAGTACCACAC | 58.407 | 50.000 | 0.00 | 0.00 | 30.91 | 3.82 |
2158 | 2404 | 3.618263 | GCCCTTACAGTTAGTACCACACC | 60.618 | 52.174 | 0.00 | 0.00 | 30.91 | 4.16 |
2159 | 2405 | 3.367703 | CCCTTACAGTTAGTACCACACCG | 60.368 | 52.174 | 0.00 | 0.00 | 30.91 | 4.94 |
2160 | 2406 | 3.248266 | CTTACAGTTAGTACCACACCGC | 58.752 | 50.000 | 0.00 | 0.00 | 30.91 | 5.68 |
2161 | 2407 | 1.335145 | ACAGTTAGTACCACACCGCT | 58.665 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2162 | 2408 | 1.271656 | ACAGTTAGTACCACACCGCTC | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
2163 | 2409 | 0.524862 | AGTTAGTACCACACCGCTCG | 59.475 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2164 | 2410 | 0.242017 | GTTAGTACCACACCGCTCGT | 59.758 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2165 | 2411 | 0.961019 | TTAGTACCACACCGCTCGTT | 59.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2166 | 2412 | 0.523072 | TAGTACCACACCGCTCGTTC | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2167 | 2413 | 2.084681 | GTACCACACCGCTCGTTCG | 61.085 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
2174 | 2420 | 4.867599 | CCGCTCGTTCGGGTAGCC | 62.868 | 72.222 | 0.00 | 0.00 | 45.38 | 3.93 |
2175 | 2421 | 4.124351 | CGCTCGTTCGGGTAGCCA | 62.124 | 66.667 | 12.31 | 0.00 | 32.50 | 4.75 |
2176 | 2422 | 2.508663 | GCTCGTTCGGGTAGCCAC | 60.509 | 66.667 | 12.31 | 1.28 | 0.00 | 5.01 |
2177 | 2423 | 3.003113 | GCTCGTTCGGGTAGCCACT | 62.003 | 63.158 | 12.31 | 0.00 | 0.00 | 4.00 |
2178 | 2424 | 1.590147 | CTCGTTCGGGTAGCCACTT | 59.410 | 57.895 | 12.31 | 0.00 | 0.00 | 3.16 |
2179 | 2425 | 0.458025 | CTCGTTCGGGTAGCCACTTC | 60.458 | 60.000 | 12.31 | 0.00 | 0.00 | 3.01 |
2180 | 2426 | 1.804326 | CGTTCGGGTAGCCACTTCG | 60.804 | 63.158 | 12.31 | 6.14 | 0.00 | 3.79 |
2181 | 2427 | 2.098831 | GTTCGGGTAGCCACTTCGC | 61.099 | 63.158 | 12.31 | 0.00 | 0.00 | 4.70 |
2182 | 2428 | 2.280552 | TTCGGGTAGCCACTTCGCT | 61.281 | 57.895 | 12.31 | 0.00 | 43.09 | 4.93 |
2183 | 2429 | 1.823169 | TTCGGGTAGCCACTTCGCTT | 61.823 | 55.000 | 12.31 | 0.00 | 40.39 | 4.68 |
2184 | 2430 | 1.375523 | CGGGTAGCCACTTCGCTTT | 60.376 | 57.895 | 12.31 | 0.00 | 40.39 | 3.51 |
2185 | 2431 | 1.359459 | CGGGTAGCCACTTCGCTTTC | 61.359 | 60.000 | 12.31 | 0.00 | 40.39 | 2.62 |
2186 | 2432 | 0.321298 | GGGTAGCCACTTCGCTTTCA | 60.321 | 55.000 | 5.96 | 0.00 | 40.39 | 2.69 |
2187 | 2433 | 1.519408 | GGTAGCCACTTCGCTTTCAA | 58.481 | 50.000 | 0.00 | 0.00 | 40.39 | 2.69 |
2188 | 2434 | 1.197036 | GGTAGCCACTTCGCTTTCAAC | 59.803 | 52.381 | 0.00 | 0.00 | 40.39 | 3.18 |
2189 | 2435 | 1.871039 | GTAGCCACTTCGCTTTCAACA | 59.129 | 47.619 | 0.00 | 0.00 | 40.39 | 3.33 |
2190 | 2436 | 1.388547 | AGCCACTTCGCTTTCAACAA | 58.611 | 45.000 | 0.00 | 0.00 | 34.73 | 2.83 |
2191 | 2437 | 1.748493 | AGCCACTTCGCTTTCAACAAA | 59.252 | 42.857 | 0.00 | 0.00 | 34.73 | 2.83 |
2192 | 2438 | 1.852280 | GCCACTTCGCTTTCAACAAAC | 59.148 | 47.619 | 0.00 | 0.00 | 0.00 | 2.93 |
2193 | 2439 | 2.459934 | CCACTTCGCTTTCAACAAACC | 58.540 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
2194 | 2440 | 2.099098 | CCACTTCGCTTTCAACAAACCT | 59.901 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
2195 | 2441 | 3.363178 | CACTTCGCTTTCAACAAACCTC | 58.637 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2196 | 2442 | 2.031683 | ACTTCGCTTTCAACAAACCTCG | 59.968 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
2197 | 2443 | 0.306533 | TCGCTTTCAACAAACCTCGC | 59.693 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2198 | 2444 | 0.660300 | CGCTTTCAACAAACCTCGCC | 60.660 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2199 | 2445 | 0.383949 | GCTTTCAACAAACCTCGCCA | 59.616 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2200 | 2446 | 1.202359 | GCTTTCAACAAACCTCGCCAA | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
2201 | 2447 | 2.737039 | GCTTTCAACAAACCTCGCCAAA | 60.737 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
2202 | 2448 | 3.716601 | CTTTCAACAAACCTCGCCAAAT | 58.283 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
2203 | 2449 | 3.810310 | TTCAACAAACCTCGCCAAATT | 57.190 | 38.095 | 0.00 | 0.00 | 0.00 | 1.82 |
2204 | 2450 | 3.810310 | TCAACAAACCTCGCCAAATTT | 57.190 | 38.095 | 0.00 | 0.00 | 0.00 | 1.82 |
2205 | 2451 | 4.920640 | TCAACAAACCTCGCCAAATTTA | 57.079 | 36.364 | 0.00 | 0.00 | 0.00 | 1.40 |
2206 | 2452 | 4.865776 | TCAACAAACCTCGCCAAATTTAG | 58.134 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
2207 | 2453 | 3.934457 | ACAAACCTCGCCAAATTTAGG | 57.066 | 42.857 | 3.58 | 3.58 | 35.14 | 2.69 |
2208 | 2454 | 2.560981 | ACAAACCTCGCCAAATTTAGGG | 59.439 | 45.455 | 9.11 | 2.40 | 33.16 | 3.53 |
2209 | 2455 | 2.823154 | CAAACCTCGCCAAATTTAGGGA | 59.177 | 45.455 | 9.11 | 6.46 | 33.16 | 4.20 |
2210 | 2456 | 2.420058 | ACCTCGCCAAATTTAGGGAG | 57.580 | 50.000 | 19.27 | 19.27 | 41.40 | 4.30 |
2212 | 2458 | 2.710096 | CTCGCCAAATTTAGGGAGGA | 57.290 | 50.000 | 18.70 | 5.93 | 38.89 | 3.71 |
2213 | 2459 | 2.999331 | CTCGCCAAATTTAGGGAGGAA | 58.001 | 47.619 | 18.70 | 0.00 | 38.89 | 3.36 |
2214 | 2460 | 2.683362 | CTCGCCAAATTTAGGGAGGAAC | 59.317 | 50.000 | 18.70 | 0.00 | 38.89 | 3.62 |
2215 | 2461 | 2.040545 | TCGCCAAATTTAGGGAGGAACA | 59.959 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2216 | 2462 | 2.163613 | CGCCAAATTTAGGGAGGAACAC | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2217 | 2463 | 2.496070 | GCCAAATTTAGGGAGGAACACC | 59.504 | 50.000 | 0.00 | 0.00 | 38.77 | 4.16 |
2218 | 2464 | 3.817931 | GCCAAATTTAGGGAGGAACACCT | 60.818 | 47.826 | 0.00 | 0.00 | 39.68 | 4.00 |
2219 | 2465 | 4.017126 | CCAAATTTAGGGAGGAACACCTC | 58.983 | 47.826 | 7.64 | 7.64 | 46.71 | 3.85 |
2237 | 2483 | 3.477899 | CTCCAACGAGGCAAATTCTTC | 57.522 | 47.619 | 0.00 | 0.00 | 37.29 | 2.87 |
2238 | 2484 | 2.813754 | CTCCAACGAGGCAAATTCTTCA | 59.186 | 45.455 | 0.00 | 0.00 | 37.29 | 3.02 |
2239 | 2485 | 3.420893 | TCCAACGAGGCAAATTCTTCAT | 58.579 | 40.909 | 0.00 | 0.00 | 37.29 | 2.57 |
2240 | 2486 | 3.440173 | TCCAACGAGGCAAATTCTTCATC | 59.560 | 43.478 | 0.00 | 0.00 | 37.29 | 2.92 |
2241 | 2487 | 3.191162 | CCAACGAGGCAAATTCTTCATCA | 59.809 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
2242 | 2488 | 4.321156 | CCAACGAGGCAAATTCTTCATCAA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2243 | 2489 | 4.425577 | ACGAGGCAAATTCTTCATCAAC | 57.574 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
2244 | 2490 | 3.820467 | ACGAGGCAAATTCTTCATCAACA | 59.180 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
2245 | 2491 | 4.278170 | ACGAGGCAAATTCTTCATCAACAA | 59.722 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
2246 | 2492 | 4.855388 | CGAGGCAAATTCTTCATCAACAAG | 59.145 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2247 | 2493 | 5.563475 | CGAGGCAAATTCTTCATCAACAAGT | 60.563 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2248 | 2494 | 5.776744 | AGGCAAATTCTTCATCAACAAGTC | 58.223 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
2249 | 2495 | 5.302568 | AGGCAAATTCTTCATCAACAAGTCA | 59.697 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2250 | 2496 | 5.984926 | GGCAAATTCTTCATCAACAAGTCAA | 59.015 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2251 | 2497 | 6.479660 | GGCAAATTCTTCATCAACAAGTCAAA | 59.520 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2252 | 2498 | 7.339953 | GCAAATTCTTCATCAACAAGTCAAAC | 58.660 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
2253 | 2499 | 7.010367 | GCAAATTCTTCATCAACAAGTCAAACA | 59.990 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2254 | 2500 | 7.992180 | AATTCTTCATCAACAAGTCAAACAC | 57.008 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2255 | 2501 | 5.155509 | TCTTCATCAACAAGTCAAACACG | 57.844 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
2256 | 2502 | 4.873259 | TCTTCATCAACAAGTCAAACACGA | 59.127 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
2257 | 2503 | 5.352846 | TCTTCATCAACAAGTCAAACACGAA | 59.647 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2258 | 2504 | 5.155509 | TCATCAACAAGTCAAACACGAAG | 57.844 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
2259 | 2505 | 4.873259 | TCATCAACAAGTCAAACACGAAGA | 59.127 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
2260 | 2506 | 5.527214 | TCATCAACAAGTCAAACACGAAGAT | 59.473 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2261 | 2507 | 5.155509 | TCAACAAGTCAAACACGAAGATG | 57.844 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
2262 | 2508 | 4.634004 | TCAACAAGTCAAACACGAAGATGT | 59.366 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
2263 | 2509 | 5.123186 | TCAACAAGTCAAACACGAAGATGTT | 59.877 | 36.000 | 0.00 | 0.00 | 44.76 | 2.71 |
2264 | 2510 | 4.908736 | ACAAGTCAAACACGAAGATGTTG | 58.091 | 39.130 | 0.00 | 0.00 | 42.01 | 3.33 |
2265 | 2511 | 4.634004 | ACAAGTCAAACACGAAGATGTTGA | 59.366 | 37.500 | 0.00 | 0.00 | 42.01 | 3.18 |
2266 | 2512 | 5.296780 | ACAAGTCAAACACGAAGATGTTGAT | 59.703 | 36.000 | 0.00 | 0.00 | 42.01 | 2.57 |
2267 | 2513 | 6.481976 | ACAAGTCAAACACGAAGATGTTGATA | 59.518 | 34.615 | 0.00 | 0.00 | 42.01 | 2.15 |
2268 | 2514 | 7.173218 | ACAAGTCAAACACGAAGATGTTGATAT | 59.827 | 33.333 | 0.00 | 0.00 | 42.01 | 1.63 |
2269 | 2515 | 7.295952 | AGTCAAACACGAAGATGTTGATATC | 57.704 | 36.000 | 0.00 | 0.00 | 42.01 | 1.63 |
2270 | 2516 | 6.313905 | AGTCAAACACGAAGATGTTGATATCC | 59.686 | 38.462 | 0.00 | 0.00 | 42.01 | 2.59 |
2271 | 2517 | 5.584649 | TCAAACACGAAGATGTTGATATCCC | 59.415 | 40.000 | 0.00 | 0.00 | 42.01 | 3.85 |
2272 | 2518 | 4.753516 | ACACGAAGATGTTGATATCCCA | 57.246 | 40.909 | 0.00 | 0.00 | 0.00 | 4.37 |
2273 | 2519 | 4.442706 | ACACGAAGATGTTGATATCCCAC | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 4.61 |
2274 | 2520 | 3.809832 | CACGAAGATGTTGATATCCCACC | 59.190 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
2275 | 2521 | 3.454447 | ACGAAGATGTTGATATCCCACCA | 59.546 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2276 | 2522 | 4.103153 | ACGAAGATGTTGATATCCCACCAT | 59.897 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
2277 | 2523 | 4.453478 | CGAAGATGTTGATATCCCACCATG | 59.547 | 45.833 | 0.00 | 0.00 | 0.00 | 3.66 |
2278 | 2524 | 4.377762 | AGATGTTGATATCCCACCATGG | 57.622 | 45.455 | 11.19 | 11.19 | 37.25 | 3.66 |
2279 | 2525 | 3.723681 | AGATGTTGATATCCCACCATGGT | 59.276 | 43.478 | 13.00 | 13.00 | 35.17 | 3.55 |
2280 | 2526 | 4.168675 | AGATGTTGATATCCCACCATGGTT | 59.831 | 41.667 | 16.84 | 2.78 | 35.17 | 3.67 |
2281 | 2527 | 3.630168 | TGTTGATATCCCACCATGGTTG | 58.370 | 45.455 | 16.84 | 12.51 | 35.17 | 3.77 |
2282 | 2528 | 3.268072 | TGTTGATATCCCACCATGGTTGA | 59.732 | 43.478 | 16.84 | 15.49 | 35.17 | 3.18 |
2283 | 2529 | 4.264128 | TGTTGATATCCCACCATGGTTGAA | 60.264 | 41.667 | 16.84 | 0.00 | 35.17 | 2.69 |
2284 | 2530 | 4.169059 | TGATATCCCACCATGGTTGAAG | 57.831 | 45.455 | 16.84 | 3.43 | 35.17 | 3.02 |
2285 | 2531 | 3.785325 | TGATATCCCACCATGGTTGAAGA | 59.215 | 43.478 | 16.84 | 9.97 | 35.17 | 2.87 |
2286 | 2532 | 4.416513 | TGATATCCCACCATGGTTGAAGAT | 59.583 | 41.667 | 16.84 | 16.31 | 35.17 | 2.40 |
2287 | 2533 | 3.763557 | ATCCCACCATGGTTGAAGATT | 57.236 | 42.857 | 16.84 | 0.00 | 35.17 | 2.40 |
2288 | 2534 | 4.879295 | ATCCCACCATGGTTGAAGATTA | 57.121 | 40.909 | 16.84 | 0.00 | 35.17 | 1.75 |
2289 | 2535 | 4.235079 | TCCCACCATGGTTGAAGATTAG | 57.765 | 45.455 | 16.84 | 0.00 | 35.17 | 1.73 |
2290 | 2536 | 2.689983 | CCCACCATGGTTGAAGATTAGC | 59.310 | 50.000 | 16.84 | 0.00 | 35.17 | 3.09 |
2291 | 2537 | 2.355756 | CCACCATGGTTGAAGATTAGCG | 59.644 | 50.000 | 16.84 | 0.00 | 31.35 | 4.26 |
2292 | 2538 | 3.270027 | CACCATGGTTGAAGATTAGCGA | 58.730 | 45.455 | 16.84 | 0.00 | 0.00 | 4.93 |
2293 | 2539 | 3.310774 | CACCATGGTTGAAGATTAGCGAG | 59.689 | 47.826 | 16.84 | 0.00 | 0.00 | 5.03 |
2294 | 2540 | 3.055094 | ACCATGGTTGAAGATTAGCGAGT | 60.055 | 43.478 | 13.00 | 0.00 | 0.00 | 4.18 |
2295 | 2541 | 3.941483 | CCATGGTTGAAGATTAGCGAGTT | 59.059 | 43.478 | 2.57 | 0.00 | 0.00 | 3.01 |
2296 | 2542 | 4.201851 | CCATGGTTGAAGATTAGCGAGTTG | 60.202 | 45.833 | 2.57 | 0.00 | 0.00 | 3.16 |
2297 | 2543 | 3.334691 | TGGTTGAAGATTAGCGAGTTGG | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
2298 | 2544 | 3.007506 | TGGTTGAAGATTAGCGAGTTGGA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
2299 | 2545 | 4.192317 | GGTTGAAGATTAGCGAGTTGGAT | 58.808 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2300 | 2546 | 4.636206 | GGTTGAAGATTAGCGAGTTGGATT | 59.364 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2301 | 2547 | 5.123979 | GGTTGAAGATTAGCGAGTTGGATTT | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2302 | 2548 | 6.349363 | GGTTGAAGATTAGCGAGTTGGATTTT | 60.349 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2303 | 2549 | 6.817765 | TGAAGATTAGCGAGTTGGATTTTT | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2304 | 2550 | 6.611381 | TGAAGATTAGCGAGTTGGATTTTTG | 58.389 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2305 | 2551 | 6.429692 | TGAAGATTAGCGAGTTGGATTTTTGA | 59.570 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2306 | 2552 | 6.817765 | AGATTAGCGAGTTGGATTTTTGAA | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2307 | 2553 | 7.214467 | AGATTAGCGAGTTGGATTTTTGAAA | 57.786 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2308 | 2554 | 7.830739 | AGATTAGCGAGTTGGATTTTTGAAAT | 58.169 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4.541482 | CATCCACCACGCATGCGC | 62.541 | 66.667 | 38.15 | 0.00 | 44.19 | 6.09 |
1 | 2 | 1.717791 | ATTCATCCACCACGCATGCG | 61.718 | 55.000 | 36.79 | 36.79 | 46.03 | 4.73 |
83 | 84 | 2.497675 | GCTTTCTCTTTCCCAAATCCCC | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
91 | 92 | 1.813178 | CCCTTTCGCTTTCTCTTTCCC | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
112 | 113 | 1.331756 | GCTGGTAGCGACATTCCATTG | 59.668 | 52.381 | 0.00 | 0.00 | 0.00 | 2.82 |
146 | 147 | 1.135689 | CCCGTTCAAAGATCCAAAGCG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
272 | 312 | 2.732094 | GCTTTGGCTTGCTGTGCG | 60.732 | 61.111 | 0.00 | 0.00 | 35.22 | 5.34 |
305 | 345 | 1.535204 | CCCCATGTGTGCCAGAAACC | 61.535 | 60.000 | 0.00 | 0.00 | 0.00 | 3.27 |
340 | 384 | 0.979665 | TCTGTGAAGCAAGGAGGAGG | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
341 | 385 | 1.898472 | TCTCTGTGAAGCAAGGAGGAG | 59.102 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
342 | 386 | 2.015456 | TCTCTGTGAAGCAAGGAGGA | 57.985 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
343 | 387 | 2.697654 | CTTCTCTGTGAAGCAAGGAGG | 58.302 | 52.381 | 6.55 | 0.00 | 44.62 | 4.30 |
391 | 435 | 1.892819 | ATCGCAGATCATAGGGCCCG | 61.893 | 60.000 | 18.44 | 1.51 | 45.12 | 6.13 |
392 | 436 | 0.107945 | GATCGCAGATCATAGGGCCC | 60.108 | 60.000 | 16.46 | 16.46 | 45.12 | 5.80 |
395 | 439 | 3.332919 | CTTTGGATCGCAGATCATAGGG | 58.667 | 50.000 | 16.61 | 0.00 | 45.12 | 3.53 |
444 | 490 | 0.324738 | TGGGAGCTGTAGAGTGGAGG | 60.325 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
464 | 510 | 3.383698 | AGTACTACTAGCCTTGGAGCA | 57.616 | 47.619 | 0.00 | 0.00 | 34.23 | 4.26 |
481 | 527 | 8.123639 | ACAAAAATGCTCTCTACTGAGTAGTA | 57.876 | 34.615 | 18.33 | 8.10 | 40.98 | 1.82 |
482 | 528 | 6.998802 | ACAAAAATGCTCTCTACTGAGTAGT | 58.001 | 36.000 | 18.33 | 0.00 | 40.98 | 2.73 |
483 | 529 | 7.897575 | AACAAAAATGCTCTCTACTGAGTAG | 57.102 | 36.000 | 13.35 | 13.35 | 40.98 | 2.57 |
484 | 530 | 8.677148 | AAAACAAAAATGCTCTCTACTGAGTA | 57.323 | 30.769 | 0.00 | 0.00 | 40.98 | 2.59 |
485 | 531 | 7.255277 | GGAAAACAAAAATGCTCTCTACTGAGT | 60.255 | 37.037 | 0.00 | 0.00 | 40.98 | 3.41 |
486 | 532 | 7.080724 | GGAAAACAAAAATGCTCTCTACTGAG | 58.919 | 38.462 | 0.00 | 0.00 | 41.51 | 3.35 |
487 | 533 | 6.545666 | TGGAAAACAAAAATGCTCTCTACTGA | 59.454 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
526 | 572 | 0.811281 | GTTCAGGGCGCTGCTAAATT | 59.189 | 50.000 | 25.01 | 0.00 | 0.00 | 1.82 |
591 | 643 | 3.316308 | TCACAGAAAAGAGAAAGGCAAGC | 59.684 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
662 | 714 | 0.393077 | AATCTAGTGGGGGCGAATCG | 59.607 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
744 | 823 | 4.217035 | TGTGCACTGGACACACAC | 57.783 | 55.556 | 19.41 | 0.00 | 42.88 | 3.82 |
748 | 827 | 1.927174 | GATACGATGTGCACTGGACAC | 59.073 | 52.381 | 19.41 | 0.06 | 38.55 | 3.67 |
749 | 828 | 1.824852 | AGATACGATGTGCACTGGACA | 59.175 | 47.619 | 19.41 | 5.77 | 0.00 | 4.02 |
750 | 829 | 2.464865 | GAGATACGATGTGCACTGGAC | 58.535 | 52.381 | 19.41 | 5.81 | 0.00 | 4.02 |
751 | 830 | 1.409064 | GGAGATACGATGTGCACTGGA | 59.591 | 52.381 | 19.41 | 4.98 | 0.00 | 3.86 |
788 | 869 | 2.706890 | TCTCGGTCCAAAGGCATAAAC | 58.293 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
805 | 886 | 0.384669 | CGGGTGACGGGTAAGATCTC | 59.615 | 60.000 | 0.00 | 0.00 | 39.42 | 2.75 |
825 | 906 | 0.798776 | GGTCACATCTGAAACAGCGG | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
855 | 936 | 8.198109 | TCTTTGTTGTTGTAGATATAGGAGAGC | 58.802 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
962 | 1064 | 1.299541 | GTGTGAGTTGTGACACCCAG | 58.700 | 55.000 | 2.45 | 0.00 | 37.15 | 4.45 |
995 | 1136 | 0.108207 | GCTGGGGACTCTCATCATGG | 59.892 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1095 | 1236 | 1.446272 | CGTTGAGGCGAGAAGGACC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
1175 | 1316 | 3.723235 | GAGGCATCGAAGCTGGCGA | 62.723 | 63.158 | 12.92 | 13.40 | 43.43 | 5.54 |
1237 | 1378 | 4.789075 | CCGGTCCGCGTCGAACAT | 62.789 | 66.667 | 5.50 | 0.00 | 0.00 | 2.71 |
1329 | 1470 | 2.911928 | GCCCTTCTAGTCTGGCCC | 59.088 | 66.667 | 0.00 | 0.00 | 37.94 | 5.80 |
1339 | 1480 | 1.846712 | GAGAGTTGGCTGGCCCTTCT | 61.847 | 60.000 | 9.28 | 8.87 | 34.56 | 2.85 |
1397 | 1539 | 2.556257 | GGGAAAGAAAAAGCGCCAAAA | 58.444 | 42.857 | 2.29 | 0.00 | 0.00 | 2.44 |
1411 | 1553 | 3.630312 | TCAAACGTCAAAAGAGGGGAAAG | 59.370 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
1422 | 1564 | 2.619147 | TGGAACGACTCAAACGTCAAA | 58.381 | 42.857 | 0.00 | 0.00 | 43.16 | 2.69 |
1427 | 1569 | 2.413837 | AGGAATGGAACGACTCAAACG | 58.586 | 47.619 | 0.00 | 0.00 | 0.00 | 3.60 |
1450 | 1592 | 1.360911 | CAAAACCGGTTGAACCCCG | 59.639 | 57.895 | 23.08 | 1.46 | 45.07 | 5.73 |
1532 | 1674 | 5.064452 | ACAATGCTCGATTCAGATTCAAGTC | 59.936 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1539 | 1681 | 3.834489 | AGGACAATGCTCGATTCAGAT | 57.166 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
1574 | 1716 | 9.801873 | AAAAGTACGTACTGTAAAACTGAGTTA | 57.198 | 29.630 | 28.00 | 0.00 | 36.50 | 2.24 |
1592 | 1734 | 7.739043 | GGAACTGAACGAATCTTAAAAAGTACG | 59.261 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
1593 | 1735 | 8.013947 | GGGAACTGAACGAATCTTAAAAAGTAC | 58.986 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1759 | 2004 | 1.276622 | AGAACTACGGATGCAACCCT | 58.723 | 50.000 | 7.52 | 0.00 | 0.00 | 4.34 |
1818 | 2064 | 1.078848 | GTGCTCGTCTTCAGCCCAT | 60.079 | 57.895 | 0.00 | 0.00 | 35.89 | 4.00 |
1824 | 2070 | 1.664649 | CCAAGCGTGCTCGTCTTCA | 60.665 | 57.895 | 10.18 | 0.00 | 39.49 | 3.02 |
1852 | 2098 | 6.102897 | ACATGCCCTAAATACTAGTAGCAG | 57.897 | 41.667 | 15.00 | 8.93 | 31.70 | 4.24 |
1868 | 2114 | 4.330250 | AGATAGCATCATTGTACATGCCC | 58.670 | 43.478 | 14.08 | 5.86 | 45.63 | 5.36 |
1869 | 2115 | 5.954296 | AAGATAGCATCATTGTACATGCC | 57.046 | 39.130 | 14.08 | 1.71 | 45.63 | 4.40 |
1870 | 2116 | 7.895975 | TCTAAGATAGCATCATTGTACATGC | 57.104 | 36.000 | 10.53 | 10.53 | 44.96 | 4.06 |
1871 | 2117 | 9.486497 | ACTTCTAAGATAGCATCATTGTACATG | 57.514 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
1872 | 2118 | 9.486497 | CACTTCTAAGATAGCATCATTGTACAT | 57.514 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1873 | 2119 | 8.478066 | ACACTTCTAAGATAGCATCATTGTACA | 58.522 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
1874 | 2120 | 8.879342 | ACACTTCTAAGATAGCATCATTGTAC | 57.121 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
1875 | 2121 | 8.695456 | TGACACTTCTAAGATAGCATCATTGTA | 58.305 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1876 | 2122 | 7.493971 | GTGACACTTCTAAGATAGCATCATTGT | 59.506 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
1877 | 2123 | 7.493645 | TGTGACACTTCTAAGATAGCATCATTG | 59.506 | 37.037 | 7.20 | 0.00 | 0.00 | 2.82 |
1878 | 2124 | 7.559486 | TGTGACACTTCTAAGATAGCATCATT | 58.441 | 34.615 | 7.20 | 0.00 | 0.00 | 2.57 |
1879 | 2125 | 7.117285 | TGTGACACTTCTAAGATAGCATCAT | 57.883 | 36.000 | 7.20 | 0.00 | 0.00 | 2.45 |
1880 | 2126 | 6.530019 | TGTGACACTTCTAAGATAGCATCA | 57.470 | 37.500 | 7.20 | 0.00 | 0.00 | 3.07 |
1881 | 2127 | 7.812191 | CCTATGTGACACTTCTAAGATAGCATC | 59.188 | 40.741 | 7.20 | 0.00 | 0.00 | 3.91 |
1882 | 2128 | 7.507277 | TCCTATGTGACACTTCTAAGATAGCAT | 59.493 | 37.037 | 7.20 | 0.00 | 0.00 | 3.79 |
1883 | 2129 | 6.833933 | TCCTATGTGACACTTCTAAGATAGCA | 59.166 | 38.462 | 7.20 | 0.00 | 0.00 | 3.49 |
1884 | 2130 | 7.278461 | TCCTATGTGACACTTCTAAGATAGC | 57.722 | 40.000 | 7.20 | 0.00 | 0.00 | 2.97 |
1888 | 2134 | 8.188799 | CGTTTATCCTATGTGACACTTCTAAGA | 58.811 | 37.037 | 7.20 | 0.00 | 0.00 | 2.10 |
1889 | 2135 | 8.188799 | TCGTTTATCCTATGTGACACTTCTAAG | 58.811 | 37.037 | 7.20 | 0.00 | 0.00 | 2.18 |
1890 | 2136 | 8.058667 | TCGTTTATCCTATGTGACACTTCTAA | 57.941 | 34.615 | 7.20 | 0.00 | 0.00 | 2.10 |
1891 | 2137 | 7.634671 | TCGTTTATCCTATGTGACACTTCTA | 57.365 | 36.000 | 7.20 | 0.00 | 0.00 | 2.10 |
1892 | 2138 | 6.525578 | TCGTTTATCCTATGTGACACTTCT | 57.474 | 37.500 | 7.20 | 0.00 | 0.00 | 2.85 |
1893 | 2139 | 6.978659 | TCATCGTTTATCCTATGTGACACTTC | 59.021 | 38.462 | 7.20 | 0.00 | 0.00 | 3.01 |
1894 | 2140 | 6.873997 | TCATCGTTTATCCTATGTGACACTT | 58.126 | 36.000 | 7.20 | 3.00 | 0.00 | 3.16 |
1895 | 2141 | 6.461648 | CCTCATCGTTTATCCTATGTGACACT | 60.462 | 42.308 | 7.20 | 0.00 | 0.00 | 3.55 |
1896 | 2142 | 5.692204 | CCTCATCGTTTATCCTATGTGACAC | 59.308 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1897 | 2143 | 5.362717 | ACCTCATCGTTTATCCTATGTGACA | 59.637 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1898 | 2144 | 5.692204 | CACCTCATCGTTTATCCTATGTGAC | 59.308 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1899 | 2145 | 5.596772 | TCACCTCATCGTTTATCCTATGTGA | 59.403 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1900 | 2146 | 5.842907 | TCACCTCATCGTTTATCCTATGTG | 58.157 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
1901 | 2147 | 6.463049 | CCTTCACCTCATCGTTTATCCTATGT | 60.463 | 42.308 | 0.00 | 0.00 | 0.00 | 2.29 |
1902 | 2148 | 5.928839 | CCTTCACCTCATCGTTTATCCTATG | 59.071 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
1903 | 2149 | 5.839063 | TCCTTCACCTCATCGTTTATCCTAT | 59.161 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1904 | 2150 | 5.205821 | TCCTTCACCTCATCGTTTATCCTA | 58.794 | 41.667 | 0.00 | 0.00 | 0.00 | 2.94 |
1905 | 2151 | 4.030913 | TCCTTCACCTCATCGTTTATCCT | 58.969 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
1906 | 2152 | 4.099573 | TCTCCTTCACCTCATCGTTTATCC | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
1907 | 2153 | 5.067936 | TCTCTCCTTCACCTCATCGTTTATC | 59.932 | 44.000 | 0.00 | 0.00 | 0.00 | 1.75 |
1908 | 2154 | 4.956700 | TCTCTCCTTCACCTCATCGTTTAT | 59.043 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
1909 | 2155 | 4.341487 | TCTCTCCTTCACCTCATCGTTTA | 58.659 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
1910 | 2156 | 3.165875 | TCTCTCCTTCACCTCATCGTTT | 58.834 | 45.455 | 0.00 | 0.00 | 0.00 | 3.60 |
1911 | 2157 | 2.757868 | CTCTCTCCTTCACCTCATCGTT | 59.242 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1912 | 2158 | 2.025793 | TCTCTCTCCTTCACCTCATCGT | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
1913 | 2159 | 2.649190 | TCTCTCTCCTTCACCTCATCG | 58.351 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
1914 | 2160 | 4.023291 | ACTTCTCTCTCCTTCACCTCATC | 58.977 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
1915 | 2161 | 4.023291 | GACTTCTCTCTCCTTCACCTCAT | 58.977 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1916 | 2162 | 3.075283 | AGACTTCTCTCTCCTTCACCTCA | 59.925 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
1917 | 2163 | 3.697166 | AGACTTCTCTCTCCTTCACCTC | 58.303 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1918 | 2164 | 3.825908 | AGACTTCTCTCTCCTTCACCT | 57.174 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
1919 | 2165 | 5.986501 | TTAAGACTTCTCTCTCCTTCACC | 57.013 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
1978 | 2224 | 8.310382 | ACACATATTATGCTAAGAGATCACCTC | 58.690 | 37.037 | 3.52 | 0.00 | 42.28 | 3.85 |
1979 | 2225 | 8.200024 | ACACATATTATGCTAAGAGATCACCT | 57.800 | 34.615 | 3.52 | 0.00 | 0.00 | 4.00 |
1980 | 2226 | 8.090831 | TGACACATATTATGCTAAGAGATCACC | 58.909 | 37.037 | 3.52 | 0.00 | 0.00 | 4.02 |
1981 | 2227 | 8.920665 | GTGACACATATTATGCTAAGAGATCAC | 58.079 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
1982 | 2228 | 8.090831 | GGTGACACATATTATGCTAAGAGATCA | 58.909 | 37.037 | 8.08 | 0.00 | 0.00 | 2.92 |
1983 | 2229 | 8.090831 | TGGTGACACATATTATGCTAAGAGATC | 58.909 | 37.037 | 8.08 | 0.00 | 33.40 | 2.75 |
1984 | 2230 | 7.966812 | TGGTGACACATATTATGCTAAGAGAT | 58.033 | 34.615 | 8.08 | 0.00 | 33.40 | 2.75 |
1985 | 2231 | 7.360113 | TGGTGACACATATTATGCTAAGAGA | 57.640 | 36.000 | 8.08 | 0.00 | 33.40 | 3.10 |
2003 | 2249 | 6.575162 | AGACATTCCTAAAAACATGGTGAC | 57.425 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2004 | 2250 | 7.458397 | ACTAGACATTCCTAAAAACATGGTGA | 58.542 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
2005 | 2251 | 7.687941 | ACTAGACATTCCTAAAAACATGGTG | 57.312 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2006 | 2252 | 9.975218 | ATAACTAGACATTCCTAAAAACATGGT | 57.025 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
2018 | 2264 | 8.994170 | GCCTTATCTTCAATAACTAGACATTCC | 58.006 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2019 | 2265 | 9.771534 | AGCCTTATCTTCAATAACTAGACATTC | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
2027 | 2273 | 9.995003 | CATCTCTTAGCCTTATCTTCAATAACT | 57.005 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2028 | 2274 | 9.988815 | TCATCTCTTAGCCTTATCTTCAATAAC | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2029 | 2275 | 9.988815 | GTCATCTCTTAGCCTTATCTTCAATAA | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2030 | 2276 | 8.589338 | GGTCATCTCTTAGCCTTATCTTCAATA | 58.411 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
2031 | 2277 | 7.449247 | GGTCATCTCTTAGCCTTATCTTCAAT | 58.551 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
2032 | 2278 | 6.183361 | GGGTCATCTCTTAGCCTTATCTTCAA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 2.69 |
2033 | 2279 | 5.305644 | GGGTCATCTCTTAGCCTTATCTTCA | 59.694 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2034 | 2280 | 5.305644 | TGGGTCATCTCTTAGCCTTATCTTC | 59.694 | 44.000 | 0.00 | 0.00 | 34.30 | 2.87 |
2035 | 2281 | 5.219739 | TGGGTCATCTCTTAGCCTTATCTT | 58.780 | 41.667 | 0.00 | 0.00 | 34.30 | 2.40 |
2036 | 2282 | 4.820775 | TGGGTCATCTCTTAGCCTTATCT | 58.179 | 43.478 | 0.00 | 0.00 | 34.30 | 1.98 |
2037 | 2283 | 5.753721 | ATGGGTCATCTCTTAGCCTTATC | 57.246 | 43.478 | 0.00 | 0.00 | 34.30 | 1.75 |
2038 | 2284 | 5.370880 | ACAATGGGTCATCTCTTAGCCTTAT | 59.629 | 40.000 | 0.00 | 0.00 | 34.30 | 1.73 |
2039 | 2285 | 4.721776 | ACAATGGGTCATCTCTTAGCCTTA | 59.278 | 41.667 | 0.00 | 0.00 | 34.30 | 2.69 |
2040 | 2286 | 3.525199 | ACAATGGGTCATCTCTTAGCCTT | 59.475 | 43.478 | 0.00 | 0.00 | 34.30 | 4.35 |
2041 | 2287 | 3.118531 | ACAATGGGTCATCTCTTAGCCT | 58.881 | 45.455 | 0.00 | 0.00 | 34.30 | 4.58 |
2042 | 2288 | 3.567478 | ACAATGGGTCATCTCTTAGCC | 57.433 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
2043 | 2289 | 6.759272 | TGTATACAATGGGTCATCTCTTAGC | 58.241 | 40.000 | 2.20 | 0.00 | 0.00 | 3.09 |
2111 | 2357 | 8.765219 | GCGTGTACAATGATTGATAAGATAGTT | 58.235 | 33.333 | 12.80 | 0.00 | 0.00 | 2.24 |
2112 | 2358 | 7.385205 | GGCGTGTACAATGATTGATAAGATAGT | 59.615 | 37.037 | 12.80 | 0.00 | 0.00 | 2.12 |
2113 | 2359 | 7.148573 | GGGCGTGTACAATGATTGATAAGATAG | 60.149 | 40.741 | 12.80 | 0.00 | 0.00 | 2.08 |
2114 | 2360 | 6.649141 | GGGCGTGTACAATGATTGATAAGATA | 59.351 | 38.462 | 12.80 | 0.00 | 0.00 | 1.98 |
2115 | 2361 | 5.470098 | GGGCGTGTACAATGATTGATAAGAT | 59.530 | 40.000 | 12.80 | 0.00 | 0.00 | 2.40 |
2116 | 2362 | 4.814234 | GGGCGTGTACAATGATTGATAAGA | 59.186 | 41.667 | 12.80 | 0.00 | 0.00 | 2.10 |
2117 | 2363 | 4.816385 | AGGGCGTGTACAATGATTGATAAG | 59.184 | 41.667 | 12.80 | 1.60 | 0.00 | 1.73 |
2118 | 2364 | 4.776349 | AGGGCGTGTACAATGATTGATAA | 58.224 | 39.130 | 12.80 | 0.00 | 0.00 | 1.75 |
2119 | 2365 | 4.415881 | AGGGCGTGTACAATGATTGATA | 57.584 | 40.909 | 12.80 | 0.00 | 0.00 | 2.15 |
2120 | 2366 | 3.281727 | AGGGCGTGTACAATGATTGAT | 57.718 | 42.857 | 12.80 | 0.00 | 0.00 | 2.57 |
2121 | 2367 | 2.779755 | AGGGCGTGTACAATGATTGA | 57.220 | 45.000 | 12.80 | 0.00 | 0.00 | 2.57 |
2122 | 2368 | 3.687212 | TGTAAGGGCGTGTACAATGATTG | 59.313 | 43.478 | 3.16 | 3.16 | 0.00 | 2.67 |
2123 | 2369 | 3.938963 | CTGTAAGGGCGTGTACAATGATT | 59.061 | 43.478 | 0.00 | 0.00 | 30.11 | 2.57 |
2124 | 2370 | 3.055385 | ACTGTAAGGGCGTGTACAATGAT | 60.055 | 43.478 | 0.00 | 0.00 | 39.30 | 2.45 |
2125 | 2371 | 2.300723 | ACTGTAAGGGCGTGTACAATGA | 59.699 | 45.455 | 0.00 | 0.00 | 39.30 | 2.57 |
2126 | 2372 | 2.695359 | ACTGTAAGGGCGTGTACAATG | 58.305 | 47.619 | 0.00 | 0.00 | 39.30 | 2.82 |
2127 | 2373 | 3.412237 | AACTGTAAGGGCGTGTACAAT | 57.588 | 42.857 | 0.00 | 0.00 | 39.30 | 2.71 |
2128 | 2374 | 2.914695 | AACTGTAAGGGCGTGTACAA | 57.085 | 45.000 | 0.00 | 0.00 | 39.30 | 2.41 |
2129 | 2375 | 2.892852 | ACTAACTGTAAGGGCGTGTACA | 59.107 | 45.455 | 0.00 | 0.00 | 39.30 | 2.90 |
2130 | 2376 | 3.582714 | ACTAACTGTAAGGGCGTGTAC | 57.417 | 47.619 | 0.00 | 0.00 | 39.30 | 2.90 |
2131 | 2377 | 3.443681 | GGTACTAACTGTAAGGGCGTGTA | 59.556 | 47.826 | 0.00 | 0.00 | 39.30 | 2.90 |
2132 | 2378 | 2.232208 | GGTACTAACTGTAAGGGCGTGT | 59.768 | 50.000 | 0.00 | 0.00 | 39.30 | 4.49 |
2133 | 2379 | 2.231964 | TGGTACTAACTGTAAGGGCGTG | 59.768 | 50.000 | 0.00 | 0.00 | 39.30 | 5.34 |
2134 | 2380 | 2.232208 | GTGGTACTAACTGTAAGGGCGT | 59.768 | 50.000 | 0.00 | 0.00 | 39.30 | 5.68 |
2135 | 2381 | 2.231964 | TGTGGTACTAACTGTAAGGGCG | 59.768 | 50.000 | 0.00 | 0.00 | 39.30 | 6.13 |
2136 | 2382 | 3.593096 | GTGTGGTACTAACTGTAAGGGC | 58.407 | 50.000 | 0.00 | 0.00 | 39.30 | 5.19 |
2137 | 2383 | 3.367703 | CGGTGTGGTACTAACTGTAAGGG | 60.368 | 52.174 | 0.00 | 0.00 | 39.30 | 3.95 |
2138 | 2384 | 3.841643 | CGGTGTGGTACTAACTGTAAGG | 58.158 | 50.000 | 0.00 | 0.00 | 39.30 | 2.69 |
2139 | 2385 | 3.057033 | AGCGGTGTGGTACTAACTGTAAG | 60.057 | 47.826 | 0.00 | 0.00 | 42.29 | 2.34 |
2140 | 2386 | 2.892852 | AGCGGTGTGGTACTAACTGTAA | 59.107 | 45.455 | 0.00 | 0.00 | 32.25 | 2.41 |
2141 | 2387 | 2.489329 | GAGCGGTGTGGTACTAACTGTA | 59.511 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2142 | 2388 | 1.271656 | GAGCGGTGTGGTACTAACTGT | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
2143 | 2389 | 1.731424 | CGAGCGGTGTGGTACTAACTG | 60.731 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
2144 | 2390 | 0.524862 | CGAGCGGTGTGGTACTAACT | 59.475 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2145 | 2391 | 0.242017 | ACGAGCGGTGTGGTACTAAC | 59.758 | 55.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2146 | 2392 | 0.961019 | AACGAGCGGTGTGGTACTAA | 59.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2147 | 2393 | 0.523072 | GAACGAGCGGTGTGGTACTA | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2148 | 2394 | 1.288127 | GAACGAGCGGTGTGGTACT | 59.712 | 57.895 | 0.00 | 0.00 | 0.00 | 2.73 |
2149 | 2395 | 2.084681 | CGAACGAGCGGTGTGGTAC | 61.085 | 63.158 | 0.00 | 0.00 | 0.00 | 3.34 |
2150 | 2396 | 2.256158 | CGAACGAGCGGTGTGGTA | 59.744 | 61.111 | 0.00 | 0.00 | 0.00 | 3.25 |
2151 | 2397 | 4.657824 | CCGAACGAGCGGTGTGGT | 62.658 | 66.667 | 11.54 | 0.00 | 46.07 | 4.16 |
2158 | 2404 | 4.124351 | TGGCTACCCGAACGAGCG | 62.124 | 66.667 | 0.00 | 0.00 | 37.07 | 5.03 |
2159 | 2405 | 2.502692 | AAGTGGCTACCCGAACGAGC | 62.503 | 60.000 | 0.00 | 0.00 | 35.39 | 5.03 |
2160 | 2406 | 0.458025 | GAAGTGGCTACCCGAACGAG | 60.458 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2161 | 2407 | 1.588082 | GAAGTGGCTACCCGAACGA | 59.412 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
2162 | 2408 | 1.804326 | CGAAGTGGCTACCCGAACG | 60.804 | 63.158 | 6.75 | 0.00 | 0.00 | 3.95 |
2163 | 2409 | 2.098831 | GCGAAGTGGCTACCCGAAC | 61.099 | 63.158 | 14.93 | 0.00 | 0.00 | 3.95 |
2164 | 2410 | 1.823169 | AAGCGAAGTGGCTACCCGAA | 61.823 | 55.000 | 14.93 | 0.00 | 43.93 | 4.30 |
2165 | 2411 | 1.823169 | AAAGCGAAGTGGCTACCCGA | 61.823 | 55.000 | 14.93 | 0.00 | 43.93 | 5.14 |
2166 | 2412 | 1.359459 | GAAAGCGAAGTGGCTACCCG | 61.359 | 60.000 | 7.98 | 7.98 | 43.93 | 5.28 |
2167 | 2413 | 0.321298 | TGAAAGCGAAGTGGCTACCC | 60.321 | 55.000 | 0.00 | 0.00 | 43.93 | 3.69 |
2168 | 2414 | 1.197036 | GTTGAAAGCGAAGTGGCTACC | 59.803 | 52.381 | 0.00 | 0.00 | 43.93 | 3.18 |
2169 | 2415 | 1.871039 | TGTTGAAAGCGAAGTGGCTAC | 59.129 | 47.619 | 0.00 | 0.00 | 43.93 | 3.58 |
2170 | 2416 | 2.248280 | TGTTGAAAGCGAAGTGGCTA | 57.752 | 45.000 | 0.00 | 0.00 | 43.93 | 3.93 |
2172 | 2418 | 1.852280 | GTTTGTTGAAAGCGAAGTGGC | 59.148 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
2173 | 2419 | 2.099098 | AGGTTTGTTGAAAGCGAAGTGG | 59.901 | 45.455 | 0.00 | 0.00 | 43.13 | 4.00 |
2174 | 2420 | 3.363178 | GAGGTTTGTTGAAAGCGAAGTG | 58.637 | 45.455 | 0.00 | 0.00 | 43.13 | 3.16 |
2175 | 2421 | 2.031683 | CGAGGTTTGTTGAAAGCGAAGT | 59.968 | 45.455 | 0.00 | 0.00 | 43.13 | 3.01 |
2176 | 2422 | 2.639751 | CGAGGTTTGTTGAAAGCGAAG | 58.360 | 47.619 | 0.00 | 0.00 | 43.13 | 3.79 |
2177 | 2423 | 1.268335 | GCGAGGTTTGTTGAAAGCGAA | 60.268 | 47.619 | 0.00 | 0.00 | 43.13 | 4.70 |
2178 | 2424 | 0.306533 | GCGAGGTTTGTTGAAAGCGA | 59.693 | 50.000 | 0.00 | 0.00 | 43.13 | 4.93 |
2179 | 2425 | 0.660300 | GGCGAGGTTTGTTGAAAGCG | 60.660 | 55.000 | 0.00 | 0.00 | 43.13 | 4.68 |
2180 | 2426 | 0.383949 | TGGCGAGGTTTGTTGAAAGC | 59.616 | 50.000 | 0.00 | 0.00 | 39.44 | 3.51 |
2181 | 2427 | 2.861462 | TTGGCGAGGTTTGTTGAAAG | 57.139 | 45.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2182 | 2428 | 3.810310 | ATTTGGCGAGGTTTGTTGAAA | 57.190 | 38.095 | 0.00 | 0.00 | 0.00 | 2.69 |
2183 | 2429 | 3.810310 | AATTTGGCGAGGTTTGTTGAA | 57.190 | 38.095 | 0.00 | 0.00 | 0.00 | 2.69 |
2184 | 2430 | 3.810310 | AAATTTGGCGAGGTTTGTTGA | 57.190 | 38.095 | 0.00 | 0.00 | 0.00 | 3.18 |
2185 | 2431 | 3.987220 | CCTAAATTTGGCGAGGTTTGTTG | 59.013 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
2186 | 2432 | 3.006430 | CCCTAAATTTGGCGAGGTTTGTT | 59.994 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2187 | 2433 | 2.560981 | CCCTAAATTTGGCGAGGTTTGT | 59.439 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2188 | 2434 | 2.823154 | TCCCTAAATTTGGCGAGGTTTG | 59.177 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
2189 | 2435 | 3.089284 | CTCCCTAAATTTGGCGAGGTTT | 58.911 | 45.455 | 8.03 | 0.00 | 0.00 | 3.27 |
2190 | 2436 | 2.620627 | CCTCCCTAAATTTGGCGAGGTT | 60.621 | 50.000 | 21.28 | 0.00 | 37.32 | 3.50 |
2191 | 2437 | 1.064685 | CCTCCCTAAATTTGGCGAGGT | 60.065 | 52.381 | 21.28 | 0.00 | 37.32 | 3.85 |
2192 | 2438 | 1.211949 | TCCTCCCTAAATTTGGCGAGG | 59.788 | 52.381 | 22.81 | 22.81 | 40.38 | 4.63 |
2193 | 2439 | 2.683362 | GTTCCTCCCTAAATTTGGCGAG | 59.317 | 50.000 | 8.77 | 8.77 | 0.00 | 5.03 |
2194 | 2440 | 2.040545 | TGTTCCTCCCTAAATTTGGCGA | 59.959 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
2195 | 2441 | 2.163613 | GTGTTCCTCCCTAAATTTGGCG | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2196 | 2442 | 2.496070 | GGTGTTCCTCCCTAAATTTGGC | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2197 | 2443 | 4.047627 | AGGTGTTCCTCCCTAAATTTGG | 57.952 | 45.455 | 0.00 | 0.00 | 40.58 | 3.28 |
2217 | 2463 | 2.813754 | TGAAGAATTTGCCTCGTTGGAG | 59.186 | 45.455 | 1.63 | 0.00 | 40.14 | 3.86 |
2218 | 2464 | 2.857483 | TGAAGAATTTGCCTCGTTGGA | 58.143 | 42.857 | 1.63 | 0.00 | 38.35 | 3.53 |
2219 | 2465 | 3.191162 | TGATGAAGAATTTGCCTCGTTGG | 59.809 | 43.478 | 0.00 | 0.00 | 39.35 | 3.77 |
2220 | 2466 | 4.424061 | TGATGAAGAATTTGCCTCGTTG | 57.576 | 40.909 | 0.00 | 0.00 | 0.00 | 4.10 |
2221 | 2467 | 4.278170 | TGTTGATGAAGAATTTGCCTCGTT | 59.722 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
2222 | 2468 | 3.820467 | TGTTGATGAAGAATTTGCCTCGT | 59.180 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
2223 | 2469 | 4.424061 | TGTTGATGAAGAATTTGCCTCG | 57.576 | 40.909 | 0.00 | 0.00 | 0.00 | 4.63 |
2224 | 2470 | 5.776744 | ACTTGTTGATGAAGAATTTGCCTC | 58.223 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
2225 | 2471 | 5.302568 | TGACTTGTTGATGAAGAATTTGCCT | 59.697 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2226 | 2472 | 5.531634 | TGACTTGTTGATGAAGAATTTGCC | 58.468 | 37.500 | 0.00 | 0.00 | 0.00 | 4.52 |
2227 | 2473 | 7.010367 | TGTTTGACTTGTTGATGAAGAATTTGC | 59.990 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
2228 | 2474 | 8.323140 | GTGTTTGACTTGTTGATGAAGAATTTG | 58.677 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2229 | 2475 | 7.220683 | CGTGTTTGACTTGTTGATGAAGAATTT | 59.779 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2230 | 2476 | 6.692681 | CGTGTTTGACTTGTTGATGAAGAATT | 59.307 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
2231 | 2477 | 6.038161 | TCGTGTTTGACTTGTTGATGAAGAAT | 59.962 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2232 | 2478 | 5.352846 | TCGTGTTTGACTTGTTGATGAAGAA | 59.647 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2233 | 2479 | 4.873259 | TCGTGTTTGACTTGTTGATGAAGA | 59.127 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
2234 | 2480 | 5.155509 | TCGTGTTTGACTTGTTGATGAAG | 57.844 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2235 | 2481 | 5.352846 | TCTTCGTGTTTGACTTGTTGATGAA | 59.647 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2236 | 2482 | 4.873259 | TCTTCGTGTTTGACTTGTTGATGA | 59.127 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
2237 | 2483 | 5.155509 | TCTTCGTGTTTGACTTGTTGATG | 57.844 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
2238 | 2484 | 5.296780 | ACATCTTCGTGTTTGACTTGTTGAT | 59.703 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2239 | 2485 | 4.634004 | ACATCTTCGTGTTTGACTTGTTGA | 59.366 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
2240 | 2486 | 4.908736 | ACATCTTCGTGTTTGACTTGTTG | 58.091 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
2241 | 2487 | 5.123186 | TCAACATCTTCGTGTTTGACTTGTT | 59.877 | 36.000 | 0.00 | 0.00 | 40.17 | 2.83 |
2242 | 2488 | 4.634004 | TCAACATCTTCGTGTTTGACTTGT | 59.366 | 37.500 | 0.00 | 0.00 | 40.17 | 3.16 |
2243 | 2489 | 5.155509 | TCAACATCTTCGTGTTTGACTTG | 57.844 | 39.130 | 0.00 | 0.00 | 40.17 | 3.16 |
2244 | 2490 | 7.148407 | GGATATCAACATCTTCGTGTTTGACTT | 60.148 | 37.037 | 4.83 | 0.00 | 40.17 | 3.01 |
2245 | 2491 | 6.313905 | GGATATCAACATCTTCGTGTTTGACT | 59.686 | 38.462 | 4.83 | 0.00 | 40.17 | 3.41 |
2246 | 2492 | 6.456988 | GGGATATCAACATCTTCGTGTTTGAC | 60.457 | 42.308 | 4.83 | 0.00 | 40.17 | 3.18 |
2247 | 2493 | 5.584649 | GGGATATCAACATCTTCGTGTTTGA | 59.415 | 40.000 | 4.83 | 0.00 | 40.17 | 2.69 |
2248 | 2494 | 5.353956 | TGGGATATCAACATCTTCGTGTTTG | 59.646 | 40.000 | 4.83 | 0.00 | 40.17 | 2.93 |
2249 | 2495 | 5.354234 | GTGGGATATCAACATCTTCGTGTTT | 59.646 | 40.000 | 4.83 | 0.00 | 40.17 | 2.83 |
2250 | 2496 | 4.876107 | GTGGGATATCAACATCTTCGTGTT | 59.124 | 41.667 | 4.83 | 0.00 | 42.75 | 3.32 |
2251 | 2497 | 4.442706 | GTGGGATATCAACATCTTCGTGT | 58.557 | 43.478 | 4.83 | 0.00 | 0.00 | 4.49 |
2252 | 2498 | 3.809832 | GGTGGGATATCAACATCTTCGTG | 59.190 | 47.826 | 4.83 | 0.00 | 0.00 | 4.35 |
2253 | 2499 | 3.454447 | TGGTGGGATATCAACATCTTCGT | 59.546 | 43.478 | 4.83 | 0.00 | 28.08 | 3.85 |
2254 | 2500 | 4.071961 | TGGTGGGATATCAACATCTTCG | 57.928 | 45.455 | 4.83 | 0.00 | 28.08 | 3.79 |
2255 | 2501 | 4.763793 | CCATGGTGGGATATCAACATCTTC | 59.236 | 45.833 | 2.57 | 0.00 | 42.57 | 2.87 |
2256 | 2502 | 4.168675 | ACCATGGTGGGATATCAACATCTT | 59.831 | 41.667 | 18.99 | 0.00 | 42.57 | 2.40 |
2257 | 2503 | 3.723681 | ACCATGGTGGGATATCAACATCT | 59.276 | 43.478 | 18.99 | 0.00 | 42.57 | 2.90 |
2258 | 2504 | 4.104383 | ACCATGGTGGGATATCAACATC | 57.896 | 45.455 | 18.99 | 4.13 | 42.57 | 3.06 |
2259 | 2505 | 4.079269 | TCAACCATGGTGGGATATCAACAT | 60.079 | 41.667 | 20.60 | 0.00 | 45.03 | 2.71 |
2260 | 2506 | 3.268072 | TCAACCATGGTGGGATATCAACA | 59.732 | 43.478 | 20.60 | 0.00 | 43.37 | 3.33 |
2261 | 2507 | 3.897239 | TCAACCATGGTGGGATATCAAC | 58.103 | 45.455 | 20.60 | 2.23 | 43.37 | 3.18 |
2262 | 2508 | 4.229353 | TCTTCAACCATGGTGGGATATCAA | 59.771 | 41.667 | 20.60 | 3.25 | 43.37 | 2.57 |
2263 | 2509 | 3.785325 | TCTTCAACCATGGTGGGATATCA | 59.215 | 43.478 | 20.60 | 3.62 | 43.37 | 2.15 |
2264 | 2510 | 4.437682 | TCTTCAACCATGGTGGGATATC | 57.562 | 45.455 | 20.60 | 0.00 | 43.37 | 1.63 |
2265 | 2511 | 5.408079 | AATCTTCAACCATGGTGGGATAT | 57.592 | 39.130 | 20.60 | 5.21 | 43.37 | 1.63 |
2266 | 2512 | 4.879295 | AATCTTCAACCATGGTGGGATA | 57.121 | 40.909 | 20.60 | 2.37 | 43.37 | 2.59 |
2267 | 2513 | 3.763557 | AATCTTCAACCATGGTGGGAT | 57.236 | 42.857 | 20.60 | 15.76 | 43.37 | 3.85 |
2268 | 2514 | 3.624707 | GCTAATCTTCAACCATGGTGGGA | 60.625 | 47.826 | 20.60 | 16.65 | 43.37 | 4.37 |
2269 | 2515 | 2.689983 | GCTAATCTTCAACCATGGTGGG | 59.310 | 50.000 | 20.60 | 14.38 | 43.37 | 4.61 |
2270 | 2516 | 2.355756 | CGCTAATCTTCAACCATGGTGG | 59.644 | 50.000 | 20.60 | 17.03 | 45.02 | 4.61 |
2271 | 2517 | 3.270027 | TCGCTAATCTTCAACCATGGTG | 58.730 | 45.455 | 20.60 | 12.88 | 0.00 | 4.17 |
2272 | 2518 | 3.055094 | ACTCGCTAATCTTCAACCATGGT | 60.055 | 43.478 | 13.00 | 13.00 | 0.00 | 3.55 |
2273 | 2519 | 3.535561 | ACTCGCTAATCTTCAACCATGG | 58.464 | 45.455 | 11.19 | 11.19 | 0.00 | 3.66 |
2274 | 2520 | 4.201851 | CCAACTCGCTAATCTTCAACCATG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.66 |
2275 | 2521 | 3.941483 | CCAACTCGCTAATCTTCAACCAT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
2276 | 2522 | 3.007506 | TCCAACTCGCTAATCTTCAACCA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
2277 | 2523 | 3.596214 | TCCAACTCGCTAATCTTCAACC | 58.404 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
2278 | 2524 | 5.803020 | AATCCAACTCGCTAATCTTCAAC | 57.197 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
2279 | 2525 | 6.817765 | AAAATCCAACTCGCTAATCTTCAA | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2280 | 2526 | 6.429692 | TCAAAAATCCAACTCGCTAATCTTCA | 59.570 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
2281 | 2527 | 6.842163 | TCAAAAATCCAACTCGCTAATCTTC | 58.158 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2282 | 2528 | 6.817765 | TCAAAAATCCAACTCGCTAATCTT | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2283 | 2529 | 6.817765 | TTCAAAAATCCAACTCGCTAATCT | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.