Multiple sequence alignment - TraesCS2A01G338500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G338500 chr2A 100.000 2162 0 0 1 2162 572704588 572706749 0.000000e+00 3993.0
1 TraesCS2A01G338500 chr2A 95.665 346 15 0 1 346 340541458 340541803 6.740000e-155 556.0
2 TraesCS2A01G338500 chr2A 85.100 349 51 1 1 349 765005589 765005242 2.640000e-94 355.0
3 TraesCS2A01G338500 chr2D 87.236 1849 118 64 406 2162 417213592 417211770 0.000000e+00 1999.0
4 TraesCS2A01G338500 chr2D 84.551 356 41 13 1 349 542367458 542367110 7.390000e-90 340.0
5 TraesCS2A01G338500 chr2B 87.058 904 49 35 1313 2162 489031527 489030638 0.000000e+00 959.0
6 TraesCS2A01G338500 chr2B 94.796 538 23 2 687 1224 489032300 489031768 0.000000e+00 833.0
7 TraesCS2A01G338500 chr2B 85.714 98 2 5 1218 1315 489031735 489031650 2.280000e-15 93.5
8 TraesCS2A01G338500 chr6A 93.429 350 21 2 1 349 171793576 171793228 3.180000e-143 518.0
9 TraesCS2A01G338500 chr5A 93.410 349 23 0 1 349 569640044 569639696 3.180000e-143 518.0
10 TraesCS2A01G338500 chr4A 92.775 346 25 0 1 346 391390522 391390177 3.200000e-138 501.0
11 TraesCS2A01G338500 chr1A 92.264 349 27 0 1 349 3763139 3762791 1.490000e-136 496.0
12 TraesCS2A01G338500 chr7D 86.158 354 43 6 1 349 179629725 179629373 5.630000e-101 377.0
13 TraesCS2A01G338500 chrUn 85.549 346 49 1 1 346 371454765 371455109 5.670000e-96 361.0
14 TraesCS2A01G338500 chr1B 83.375 397 52 10 1765 2157 41525423 41525809 2.640000e-94 355.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G338500 chr2A 572704588 572706749 2161 False 3993.0 3993 100.000000 1 2162 1 chr2A.!!$F2 2161
1 TraesCS2A01G338500 chr2D 417211770 417213592 1822 True 1999.0 1999 87.236000 406 2162 1 chr2D.!!$R1 1756
2 TraesCS2A01G338500 chr2B 489030638 489032300 1662 True 628.5 959 89.189333 687 2162 3 chr2B.!!$R1 1475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.106619 ATTCTACTCGTCGCTCCCCT 60.107 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1256 1306 0.035317 ACCACTTCGATCTGCAGCAA 59.965 50.0 9.47 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.469008 AAAACAAGCAAGTAAAGCCCC 57.531 42.857 0.00 0.00 0.00 5.80
40 41 2.080654 AACAAGCAAGTAAAGCCCCA 57.919 45.000 0.00 0.00 0.00 4.96
41 42 1.328279 ACAAGCAAGTAAAGCCCCAC 58.672 50.000 0.00 0.00 0.00 4.61
42 43 1.327303 CAAGCAAGTAAAGCCCCACA 58.673 50.000 0.00 0.00 0.00 4.17
43 44 1.686052 CAAGCAAGTAAAGCCCCACAA 59.314 47.619 0.00 0.00 0.00 3.33
44 45 2.080654 AGCAAGTAAAGCCCCACAAA 57.919 45.000 0.00 0.00 0.00 2.83
45 46 2.608623 AGCAAGTAAAGCCCCACAAAT 58.391 42.857 0.00 0.00 0.00 2.32
46 47 2.299867 AGCAAGTAAAGCCCCACAAATG 59.700 45.455 0.00 0.00 0.00 2.32
47 48 2.612721 GCAAGTAAAGCCCCACAAATGG 60.613 50.000 0.00 0.00 46.81 3.16
65 66 3.228759 GCCGGCCCATGAATGCAT 61.229 61.111 18.11 0.00 34.29 3.96
66 67 1.902918 GCCGGCCCATGAATGCATA 60.903 57.895 18.11 0.00 32.27 3.14
67 68 1.959085 CCGGCCCATGAATGCATAC 59.041 57.895 0.00 0.00 32.27 2.39
68 69 0.822944 CCGGCCCATGAATGCATACA 60.823 55.000 0.00 0.00 32.27 2.29
69 70 1.250328 CGGCCCATGAATGCATACAT 58.750 50.000 0.00 0.00 38.49 2.29
70 71 1.068125 CGGCCCATGAATGCATACATG 60.068 52.381 0.00 0.00 42.12 3.21
77 78 4.654915 CATGAATGCATACATGGGTAGGA 58.345 43.478 0.00 0.00 39.79 2.94
78 79 4.085357 TGAATGCATACATGGGTAGGAC 57.915 45.455 0.00 0.00 36.36 3.85
79 80 3.457749 TGAATGCATACATGGGTAGGACA 59.542 43.478 0.00 0.00 36.36 4.02
80 81 4.104579 TGAATGCATACATGGGTAGGACAT 59.895 41.667 0.00 0.00 36.36 3.06
81 82 9.177671 CATGAATGCATACATGGGTAGGACATG 62.178 44.444 0.00 4.04 41.06 3.21
85 86 2.694065 CATGGGTAGGACATGCGTG 58.306 57.895 3.82 3.82 39.23 5.34
86 87 0.177836 CATGGGTAGGACATGCGTGA 59.822 55.000 14.17 0.00 39.23 4.35
87 88 0.465705 ATGGGTAGGACATGCGTGAG 59.534 55.000 14.17 0.00 0.00 3.51
88 89 0.613572 TGGGTAGGACATGCGTGAGA 60.614 55.000 14.17 0.00 0.00 3.27
89 90 0.535335 GGGTAGGACATGCGTGAGAA 59.465 55.000 14.17 0.00 0.00 2.87
90 91 1.066430 GGGTAGGACATGCGTGAGAAA 60.066 52.381 14.17 0.00 0.00 2.52
91 92 2.614481 GGGTAGGACATGCGTGAGAAAA 60.614 50.000 14.17 0.00 0.00 2.29
92 93 2.673368 GGTAGGACATGCGTGAGAAAAG 59.327 50.000 14.17 0.00 0.00 2.27
93 94 2.839486 AGGACATGCGTGAGAAAAGA 57.161 45.000 14.17 0.00 0.00 2.52
94 95 3.126001 AGGACATGCGTGAGAAAAGAA 57.874 42.857 14.17 0.00 0.00 2.52
95 96 3.476552 AGGACATGCGTGAGAAAAGAAA 58.523 40.909 14.17 0.00 0.00 2.52
96 97 3.499918 AGGACATGCGTGAGAAAAGAAAG 59.500 43.478 14.17 0.00 0.00 2.62
97 98 3.498397 GGACATGCGTGAGAAAAGAAAGA 59.502 43.478 14.17 0.00 0.00 2.52
98 99 4.154918 GGACATGCGTGAGAAAAGAAAGAT 59.845 41.667 14.17 0.00 0.00 2.40
99 100 5.351465 GGACATGCGTGAGAAAAGAAAGATA 59.649 40.000 14.17 0.00 0.00 1.98
100 101 6.128282 GGACATGCGTGAGAAAAGAAAGATAA 60.128 38.462 14.17 0.00 0.00 1.75
101 102 7.202016 ACATGCGTGAGAAAAGAAAGATAAA 57.798 32.000 14.17 0.00 0.00 1.40
102 103 7.648142 ACATGCGTGAGAAAAGAAAGATAAAA 58.352 30.769 14.17 0.00 0.00 1.52
103 104 8.134895 ACATGCGTGAGAAAAGAAAGATAAAAA 58.865 29.630 14.17 0.00 0.00 1.94
104 105 8.633408 CATGCGTGAGAAAAGAAAGATAAAAAG 58.367 33.333 0.00 0.00 0.00 2.27
105 106 7.703328 TGCGTGAGAAAAGAAAGATAAAAAGT 58.297 30.769 0.00 0.00 0.00 2.66
106 107 7.643764 TGCGTGAGAAAAGAAAGATAAAAAGTG 59.356 33.333 0.00 0.00 0.00 3.16
107 108 7.644157 GCGTGAGAAAAGAAAGATAAAAAGTGT 59.356 33.333 0.00 0.00 0.00 3.55
108 109 8.947940 CGTGAGAAAAGAAAGATAAAAAGTGTG 58.052 33.333 0.00 0.00 0.00 3.82
113 114 9.175060 GAAAAGAAAGATAAAAAGTGTGAGAGC 57.825 33.333 0.00 0.00 0.00 4.09
114 115 8.457238 AAAGAAAGATAAAAAGTGTGAGAGCT 57.543 30.769 0.00 0.00 0.00 4.09
115 116 9.561069 AAAGAAAGATAAAAAGTGTGAGAGCTA 57.439 29.630 0.00 0.00 0.00 3.32
116 117 8.770438 AGAAAGATAAAAAGTGTGAGAGCTAG 57.230 34.615 0.00 0.00 0.00 3.42
117 118 7.821846 AGAAAGATAAAAAGTGTGAGAGCTAGG 59.178 37.037 0.00 0.00 0.00 3.02
118 119 5.983540 AGATAAAAAGTGTGAGAGCTAGGG 58.016 41.667 0.00 0.00 0.00 3.53
119 120 5.721960 AGATAAAAAGTGTGAGAGCTAGGGA 59.278 40.000 0.00 0.00 0.00 4.20
120 121 4.917906 AAAAAGTGTGAGAGCTAGGGAT 57.082 40.909 0.00 0.00 0.00 3.85
121 122 4.917906 AAAAGTGTGAGAGCTAGGGATT 57.082 40.909 0.00 0.00 0.00 3.01
122 123 3.902881 AAGTGTGAGAGCTAGGGATTG 57.097 47.619 0.00 0.00 0.00 2.67
123 124 3.107402 AGTGTGAGAGCTAGGGATTGA 57.893 47.619 0.00 0.00 0.00 2.57
124 125 3.445008 AGTGTGAGAGCTAGGGATTGAA 58.555 45.455 0.00 0.00 0.00 2.69
125 126 3.196685 AGTGTGAGAGCTAGGGATTGAAC 59.803 47.826 0.00 0.00 0.00 3.18
126 127 2.501723 TGTGAGAGCTAGGGATTGAACC 59.498 50.000 0.00 0.00 0.00 3.62
137 138 4.779993 GGGATTGAACCCTAGTCTCATT 57.220 45.455 0.00 0.00 45.90 2.57
138 139 4.455606 GGGATTGAACCCTAGTCTCATTG 58.544 47.826 0.00 0.00 45.90 2.82
139 140 3.879892 GGATTGAACCCTAGTCTCATTGC 59.120 47.826 0.00 0.00 0.00 3.56
140 141 3.350219 TTGAACCCTAGTCTCATTGCC 57.650 47.619 0.00 0.00 0.00 4.52
141 142 2.265367 TGAACCCTAGTCTCATTGCCA 58.735 47.619 0.00 0.00 0.00 4.92
142 143 2.237143 TGAACCCTAGTCTCATTGCCAG 59.763 50.000 0.00 0.00 0.00 4.85
143 144 2.254152 ACCCTAGTCTCATTGCCAGA 57.746 50.000 0.00 0.00 0.00 3.86
144 145 2.551270 ACCCTAGTCTCATTGCCAGAA 58.449 47.619 0.00 0.00 0.00 3.02
145 146 2.503356 ACCCTAGTCTCATTGCCAGAAG 59.497 50.000 0.00 0.00 0.00 2.85
146 147 2.768527 CCCTAGTCTCATTGCCAGAAGA 59.231 50.000 0.00 0.00 0.00 2.87
147 148 3.390639 CCCTAGTCTCATTGCCAGAAGAT 59.609 47.826 0.00 0.00 0.00 2.40
148 149 4.502950 CCCTAGTCTCATTGCCAGAAGATC 60.503 50.000 0.00 0.00 0.00 2.75
149 150 4.344679 CCTAGTCTCATTGCCAGAAGATCT 59.655 45.833 0.00 0.00 0.00 2.75
150 151 5.538053 CCTAGTCTCATTGCCAGAAGATCTA 59.462 44.000 0.00 0.00 0.00 1.98
151 152 5.275067 AGTCTCATTGCCAGAAGATCTAC 57.725 43.478 0.00 0.00 0.00 2.59
152 153 4.100808 AGTCTCATTGCCAGAAGATCTACC 59.899 45.833 0.00 0.00 0.00 3.18
153 154 4.033009 TCTCATTGCCAGAAGATCTACCA 58.967 43.478 0.00 0.00 0.00 3.25
154 155 4.100653 TCTCATTGCCAGAAGATCTACCAG 59.899 45.833 0.00 0.00 0.00 4.00
155 156 2.698855 TTGCCAGAAGATCTACCAGC 57.301 50.000 0.00 0.00 0.00 4.85
156 157 0.833287 TGCCAGAAGATCTACCAGCC 59.167 55.000 0.00 0.00 0.00 4.85
157 158 0.833287 GCCAGAAGATCTACCAGCCA 59.167 55.000 0.00 0.00 0.00 4.75
158 159 1.210478 GCCAGAAGATCTACCAGCCAA 59.790 52.381 0.00 0.00 0.00 4.52
159 160 2.911484 CCAGAAGATCTACCAGCCAAC 58.089 52.381 0.00 0.00 0.00 3.77
160 161 2.420687 CCAGAAGATCTACCAGCCAACC 60.421 54.545 0.00 0.00 0.00 3.77
161 162 2.237143 CAGAAGATCTACCAGCCAACCA 59.763 50.000 0.00 0.00 0.00 3.67
162 163 2.237392 AGAAGATCTACCAGCCAACCAC 59.763 50.000 0.00 0.00 0.00 4.16
163 164 1.958288 AGATCTACCAGCCAACCACT 58.042 50.000 0.00 0.00 0.00 4.00
164 165 1.834263 AGATCTACCAGCCAACCACTC 59.166 52.381 0.00 0.00 0.00 3.51
165 166 1.834263 GATCTACCAGCCAACCACTCT 59.166 52.381 0.00 0.00 0.00 3.24
166 167 0.976641 TCTACCAGCCAACCACTCTG 59.023 55.000 0.00 0.00 0.00 3.35
167 168 0.674895 CTACCAGCCAACCACTCTGC 60.675 60.000 0.00 0.00 0.00 4.26
168 169 2.124507 TACCAGCCAACCACTCTGCC 62.125 60.000 0.00 0.00 0.00 4.85
169 170 2.113774 CAGCCAACCACTCTGCCA 59.886 61.111 0.00 0.00 0.00 4.92
170 171 1.303888 CAGCCAACCACTCTGCCAT 60.304 57.895 0.00 0.00 0.00 4.40
171 172 0.896940 CAGCCAACCACTCTGCCATT 60.897 55.000 0.00 0.00 0.00 3.16
172 173 0.610232 AGCCAACCACTCTGCCATTC 60.610 55.000 0.00 0.00 0.00 2.67
173 174 0.895100 GCCAACCACTCTGCCATTCA 60.895 55.000 0.00 0.00 0.00 2.57
174 175 1.843368 CCAACCACTCTGCCATTCAT 58.157 50.000 0.00 0.00 0.00 2.57
175 176 2.173519 CCAACCACTCTGCCATTCATT 58.826 47.619 0.00 0.00 0.00 2.57
176 177 2.564062 CCAACCACTCTGCCATTCATTT 59.436 45.455 0.00 0.00 0.00 2.32
177 178 3.007182 CCAACCACTCTGCCATTCATTTT 59.993 43.478 0.00 0.00 0.00 1.82
178 179 4.503643 CCAACCACTCTGCCATTCATTTTT 60.504 41.667 0.00 0.00 0.00 1.94
179 180 4.525912 ACCACTCTGCCATTCATTTTTC 57.474 40.909 0.00 0.00 0.00 2.29
180 181 4.154942 ACCACTCTGCCATTCATTTTTCT 58.845 39.130 0.00 0.00 0.00 2.52
181 182 4.021719 ACCACTCTGCCATTCATTTTTCTG 60.022 41.667 0.00 0.00 0.00 3.02
182 183 4.021719 CCACTCTGCCATTCATTTTTCTGT 60.022 41.667 0.00 0.00 0.00 3.41
183 184 4.921515 CACTCTGCCATTCATTTTTCTGTG 59.078 41.667 0.00 0.00 0.00 3.66
184 185 4.586001 ACTCTGCCATTCATTTTTCTGTGT 59.414 37.500 0.00 0.00 0.00 3.72
185 186 5.769662 ACTCTGCCATTCATTTTTCTGTGTA 59.230 36.000 0.00 0.00 0.00 2.90
186 187 6.435277 ACTCTGCCATTCATTTTTCTGTGTAT 59.565 34.615 0.00 0.00 0.00 2.29
187 188 7.039504 ACTCTGCCATTCATTTTTCTGTGTATT 60.040 33.333 0.00 0.00 0.00 1.89
188 189 7.315142 TCTGCCATTCATTTTTCTGTGTATTC 58.685 34.615 0.00 0.00 0.00 1.75
189 190 7.177216 TCTGCCATTCATTTTTCTGTGTATTCT 59.823 33.333 0.00 0.00 0.00 2.40
190 191 8.347004 TGCCATTCATTTTTCTGTGTATTCTA 57.653 30.769 0.00 0.00 0.00 2.10
191 192 8.243426 TGCCATTCATTTTTCTGTGTATTCTAC 58.757 33.333 0.00 0.00 0.00 2.59
192 193 8.462016 GCCATTCATTTTTCTGTGTATTCTACT 58.538 33.333 0.00 0.00 0.00 2.57
193 194 9.994432 CCATTCATTTTTCTGTGTATTCTACTC 57.006 33.333 0.00 0.00 0.00 2.59
194 195 9.694520 CATTCATTTTTCTGTGTATTCTACTCG 57.305 33.333 0.00 0.00 0.00 4.18
195 196 8.827177 TTCATTTTTCTGTGTATTCTACTCGT 57.173 30.769 0.00 0.00 0.00 4.18
196 197 8.462143 TCATTTTTCTGTGTATTCTACTCGTC 57.538 34.615 0.00 0.00 0.00 4.20
197 198 6.922980 TTTTTCTGTGTATTCTACTCGTCG 57.077 37.500 0.00 0.00 0.00 5.12
198 199 3.670311 TCTGTGTATTCTACTCGTCGC 57.330 47.619 0.00 0.00 0.00 5.19
199 200 3.268330 TCTGTGTATTCTACTCGTCGCT 58.732 45.455 0.00 0.00 0.00 4.93
200 201 3.309138 TCTGTGTATTCTACTCGTCGCTC 59.691 47.826 0.00 0.00 0.00 5.03
201 202 2.353889 TGTGTATTCTACTCGTCGCTCC 59.646 50.000 0.00 0.00 0.00 4.70
202 203 1.945394 TGTATTCTACTCGTCGCTCCC 59.055 52.381 0.00 0.00 0.00 4.30
203 204 1.266446 GTATTCTACTCGTCGCTCCCC 59.734 57.143 0.00 0.00 0.00 4.81
204 205 0.106619 ATTCTACTCGTCGCTCCCCT 60.107 55.000 0.00 0.00 0.00 4.79
205 206 0.543277 TTCTACTCGTCGCTCCCCTA 59.457 55.000 0.00 0.00 0.00 3.53
206 207 0.763652 TCTACTCGTCGCTCCCCTAT 59.236 55.000 0.00 0.00 0.00 2.57
207 208 1.973515 TCTACTCGTCGCTCCCCTATA 59.026 52.381 0.00 0.00 0.00 1.31
208 209 2.369860 TCTACTCGTCGCTCCCCTATAA 59.630 50.000 0.00 0.00 0.00 0.98
209 210 2.062971 ACTCGTCGCTCCCCTATAAA 57.937 50.000 0.00 0.00 0.00 1.40
210 211 2.381911 ACTCGTCGCTCCCCTATAAAA 58.618 47.619 0.00 0.00 0.00 1.52
211 212 2.100418 ACTCGTCGCTCCCCTATAAAAC 59.900 50.000 0.00 0.00 0.00 2.43
212 213 2.100252 CTCGTCGCTCCCCTATAAAACA 59.900 50.000 0.00 0.00 0.00 2.83
213 214 2.496871 TCGTCGCTCCCCTATAAAACAA 59.503 45.455 0.00 0.00 0.00 2.83
214 215 3.133362 TCGTCGCTCCCCTATAAAACAAT 59.867 43.478 0.00 0.00 0.00 2.71
215 216 3.247648 CGTCGCTCCCCTATAAAACAATG 59.752 47.826 0.00 0.00 0.00 2.82
216 217 4.448210 GTCGCTCCCCTATAAAACAATGA 58.552 43.478 0.00 0.00 0.00 2.57
217 218 4.879545 GTCGCTCCCCTATAAAACAATGAA 59.120 41.667 0.00 0.00 0.00 2.57
218 219 5.007724 GTCGCTCCCCTATAAAACAATGAAG 59.992 44.000 0.00 0.00 0.00 3.02
219 220 4.275936 CGCTCCCCTATAAAACAATGAAGG 59.724 45.833 0.00 0.00 0.00 3.46
220 221 5.445964 GCTCCCCTATAAAACAATGAAGGA 58.554 41.667 0.00 0.00 0.00 3.36
221 222 5.532779 GCTCCCCTATAAAACAATGAAGGAG 59.467 44.000 0.00 0.00 40.12 3.69
222 223 6.013554 TCCCCTATAAAACAATGAAGGAGG 57.986 41.667 0.00 0.00 0.00 4.30
223 224 5.494706 TCCCCTATAAAACAATGAAGGAGGT 59.505 40.000 0.00 0.00 0.00 3.85
224 225 5.594317 CCCCTATAAAACAATGAAGGAGGTG 59.406 44.000 0.00 0.00 0.00 4.00
225 226 5.594317 CCCTATAAAACAATGAAGGAGGTGG 59.406 44.000 0.00 0.00 0.00 4.61
226 227 5.067805 CCTATAAAACAATGAAGGAGGTGGC 59.932 44.000 0.00 0.00 0.00 5.01
227 228 1.247567 AAACAATGAAGGAGGTGGCG 58.752 50.000 0.00 0.00 0.00 5.69
228 229 0.400213 AACAATGAAGGAGGTGGCGA 59.600 50.000 0.00 0.00 0.00 5.54
229 230 0.620556 ACAATGAAGGAGGTGGCGAT 59.379 50.000 0.00 0.00 0.00 4.58
230 231 1.004745 ACAATGAAGGAGGTGGCGATT 59.995 47.619 0.00 0.00 0.00 3.34
231 232 2.094675 CAATGAAGGAGGTGGCGATTT 58.905 47.619 0.00 0.00 0.00 2.17
232 233 2.493278 CAATGAAGGAGGTGGCGATTTT 59.507 45.455 0.00 0.00 0.00 1.82
233 234 2.286365 TGAAGGAGGTGGCGATTTTT 57.714 45.000 0.00 0.00 0.00 1.94
234 235 1.885887 TGAAGGAGGTGGCGATTTTTG 59.114 47.619 0.00 0.00 0.00 2.44
235 236 1.202348 GAAGGAGGTGGCGATTTTTGG 59.798 52.381 0.00 0.00 0.00 3.28
236 237 0.112412 AGGAGGTGGCGATTTTTGGT 59.888 50.000 0.00 0.00 0.00 3.67
237 238 0.526211 GGAGGTGGCGATTTTTGGTC 59.474 55.000 0.00 0.00 0.00 4.02
238 239 0.526211 GAGGTGGCGATTTTTGGTCC 59.474 55.000 0.00 0.00 0.00 4.46
239 240 1.211709 GGTGGCGATTTTTGGTCCG 59.788 57.895 0.00 0.00 0.00 4.79
240 241 1.238625 GGTGGCGATTTTTGGTCCGA 61.239 55.000 0.00 0.00 0.00 4.55
241 242 0.594110 GTGGCGATTTTTGGTCCGAA 59.406 50.000 0.00 0.00 0.00 4.30
242 243 1.001158 GTGGCGATTTTTGGTCCGAAA 60.001 47.619 0.00 0.00 0.00 3.46
243 244 1.681793 TGGCGATTTTTGGTCCGAAAA 59.318 42.857 17.68 17.68 32.25 2.29
244 245 2.100916 TGGCGATTTTTGGTCCGAAAAA 59.899 40.909 18.99 14.92 38.75 1.94
245 246 3.243907 TGGCGATTTTTGGTCCGAAAAAT 60.244 39.130 18.99 18.11 44.49 1.82
246 247 3.743911 GGCGATTTTTGGTCCGAAAAATT 59.256 39.130 18.99 5.74 42.76 1.82
247 248 4.376920 GGCGATTTTTGGTCCGAAAAATTG 60.377 41.667 18.99 20.37 42.76 2.32
248 249 4.446051 GCGATTTTTGGTCCGAAAAATTGA 59.554 37.500 25.26 8.60 43.52 2.57
249 250 5.050702 GCGATTTTTGGTCCGAAAAATTGAA 60.051 36.000 25.26 8.08 43.52 2.69
250 251 6.347321 GCGATTTTTGGTCCGAAAAATTGAAT 60.347 34.615 25.26 11.81 43.52 2.57
251 252 7.226772 CGATTTTTGGTCCGAAAAATTGAATC 58.773 34.615 18.99 10.90 43.52 2.52
252 253 6.517914 TTTTTGGTCCGAAAAATTGAATCG 57.482 33.333 13.78 1.91 31.39 3.34
253 254 4.839668 TTGGTCCGAAAAATTGAATCGT 57.160 36.364 6.93 0.00 34.90 3.73
254 255 4.839668 TGGTCCGAAAAATTGAATCGTT 57.160 36.364 6.93 0.00 34.90 3.85
255 256 5.189659 TGGTCCGAAAAATTGAATCGTTT 57.810 34.783 6.93 0.00 34.90 3.60
256 257 5.593010 TGGTCCGAAAAATTGAATCGTTTT 58.407 33.333 6.93 0.00 34.90 2.43
257 258 5.688176 TGGTCCGAAAAATTGAATCGTTTTC 59.312 36.000 5.43 5.43 37.71 2.29
258 259 5.918576 GGTCCGAAAAATTGAATCGTTTTCT 59.081 36.000 11.23 0.02 38.52 2.52
259 260 7.079475 GGTCCGAAAAATTGAATCGTTTTCTA 58.921 34.615 11.23 0.89 38.52 2.10
260 261 7.060289 GGTCCGAAAAATTGAATCGTTTTCTAC 59.940 37.037 11.23 9.40 38.52 2.59
261 262 7.801783 GTCCGAAAAATTGAATCGTTTTCTACT 59.198 33.333 11.23 0.00 38.52 2.57
262 263 8.347035 TCCGAAAAATTGAATCGTTTTCTACTT 58.653 29.630 11.23 0.00 38.52 2.24
263 264 9.601971 CCGAAAAATTGAATCGTTTTCTACTTA 57.398 29.630 11.23 0.00 38.52 2.24
267 268 9.855021 AAAATTGAATCGTTTTCTACTTATGGG 57.145 29.630 3.29 0.00 0.00 4.00
268 269 8.575649 AATTGAATCGTTTTCTACTTATGGGT 57.424 30.769 3.29 0.00 0.00 4.51
269 270 6.978343 TGAATCGTTTTCTACTTATGGGTG 57.022 37.500 3.29 0.00 0.00 4.61
270 271 5.878116 TGAATCGTTTTCTACTTATGGGTGG 59.122 40.000 3.29 0.00 0.00 4.61
271 272 3.602483 TCGTTTTCTACTTATGGGTGGC 58.398 45.455 0.00 0.00 0.00 5.01
272 273 3.008157 TCGTTTTCTACTTATGGGTGGCA 59.992 43.478 0.00 0.00 0.00 4.92
273 274 3.945285 CGTTTTCTACTTATGGGTGGCAT 59.055 43.478 0.00 0.00 0.00 4.40
274 275 4.398044 CGTTTTCTACTTATGGGTGGCATT 59.602 41.667 0.00 0.00 0.00 3.56
275 276 5.650543 GTTTTCTACTTATGGGTGGCATTG 58.349 41.667 0.00 0.00 0.00 2.82
276 277 3.576078 TCTACTTATGGGTGGCATTGG 57.424 47.619 0.00 0.00 0.00 3.16
277 278 2.849943 TCTACTTATGGGTGGCATTGGT 59.150 45.455 0.00 0.00 0.00 3.67
278 279 1.851304 ACTTATGGGTGGCATTGGTG 58.149 50.000 0.00 0.00 0.00 4.17
279 280 1.113788 CTTATGGGTGGCATTGGTGG 58.886 55.000 0.00 0.00 0.00 4.61
280 281 0.325110 TTATGGGTGGCATTGGTGGG 60.325 55.000 0.00 0.00 0.00 4.61
281 282 1.513975 TATGGGTGGCATTGGTGGGT 61.514 55.000 0.00 0.00 0.00 4.51
282 283 1.513975 ATGGGTGGCATTGGTGGGTA 61.514 55.000 0.00 0.00 0.00 3.69
283 284 1.077625 GGGTGGCATTGGTGGGTAA 59.922 57.895 0.00 0.00 0.00 2.85
284 285 0.325203 GGGTGGCATTGGTGGGTAAT 60.325 55.000 0.00 0.00 0.00 1.89
285 286 1.567357 GGTGGCATTGGTGGGTAATT 58.433 50.000 0.00 0.00 0.00 1.40
286 287 1.905894 GGTGGCATTGGTGGGTAATTT 59.094 47.619 0.00 0.00 0.00 1.82
287 288 2.304470 GGTGGCATTGGTGGGTAATTTT 59.696 45.455 0.00 0.00 0.00 1.82
288 289 3.244735 GGTGGCATTGGTGGGTAATTTTT 60.245 43.478 0.00 0.00 0.00 1.94
289 290 4.020128 GGTGGCATTGGTGGGTAATTTTTA 60.020 41.667 0.00 0.00 0.00 1.52
290 291 5.338789 GGTGGCATTGGTGGGTAATTTTTAT 60.339 40.000 0.00 0.00 0.00 1.40
291 292 5.815222 GTGGCATTGGTGGGTAATTTTTATC 59.185 40.000 0.00 0.00 0.00 1.75
292 293 5.485353 TGGCATTGGTGGGTAATTTTTATCA 59.515 36.000 0.00 0.00 0.00 2.15
293 294 6.013379 TGGCATTGGTGGGTAATTTTTATCAA 60.013 34.615 0.00 0.00 0.00 2.57
294 295 6.315144 GGCATTGGTGGGTAATTTTTATCAAC 59.685 38.462 0.00 0.00 0.00 3.18
295 296 7.102993 GCATTGGTGGGTAATTTTTATCAACT 58.897 34.615 0.00 0.00 0.00 3.16
296 297 7.606073 GCATTGGTGGGTAATTTTTATCAACTT 59.394 33.333 0.00 0.00 0.00 2.66
297 298 8.934825 CATTGGTGGGTAATTTTTATCAACTTG 58.065 33.333 0.00 0.00 0.00 3.16
298 299 7.841282 TGGTGGGTAATTTTTATCAACTTGA 57.159 32.000 0.00 0.00 0.00 3.02
299 300 8.251383 TGGTGGGTAATTTTTATCAACTTGAA 57.749 30.769 0.00 0.00 0.00 2.69
300 301 8.364142 TGGTGGGTAATTTTTATCAACTTGAAG 58.636 33.333 0.00 0.00 0.00 3.02
301 302 7.817478 GGTGGGTAATTTTTATCAACTTGAAGG 59.183 37.037 0.00 0.00 0.00 3.46
302 303 7.817478 GTGGGTAATTTTTATCAACTTGAAGGG 59.183 37.037 0.00 0.00 0.00 3.95
303 304 7.511028 TGGGTAATTTTTATCAACTTGAAGGGT 59.489 33.333 0.00 0.00 0.00 4.34
304 305 9.027202 GGGTAATTTTTATCAACTTGAAGGGTA 57.973 33.333 0.00 0.00 0.00 3.69
305 306 9.850628 GGTAATTTTTATCAACTTGAAGGGTAC 57.149 33.333 0.00 0.00 0.00 3.34
314 315 8.934023 ATCAACTTGAAGGGTACTTTTAATGA 57.066 30.769 0.00 0.00 36.97 2.57
315 316 8.161699 TCAACTTGAAGGGTACTTTTAATGAC 57.838 34.615 0.00 0.00 36.97 3.06
316 317 6.796705 ACTTGAAGGGTACTTTTAATGACG 57.203 37.500 0.00 0.00 36.97 4.35
317 318 5.704053 ACTTGAAGGGTACTTTTAATGACGG 59.296 40.000 0.00 0.00 36.97 4.79
318 319 5.486735 TGAAGGGTACTTTTAATGACGGA 57.513 39.130 0.00 0.00 36.97 4.69
319 320 5.240121 TGAAGGGTACTTTTAATGACGGAC 58.760 41.667 0.00 0.00 36.97 4.79
320 321 3.853475 AGGGTACTTTTAATGACGGACG 58.147 45.455 0.00 0.00 0.00 4.79
321 322 3.511146 AGGGTACTTTTAATGACGGACGA 59.489 43.478 0.00 0.00 0.00 4.20
322 323 3.614176 GGGTACTTTTAATGACGGACGAC 59.386 47.826 0.00 0.00 0.00 4.34
323 324 3.614176 GGTACTTTTAATGACGGACGACC 59.386 47.826 0.00 0.00 0.00 4.79
324 325 3.389925 ACTTTTAATGACGGACGACCA 57.610 42.857 4.48 0.00 35.59 4.02
325 326 3.323243 ACTTTTAATGACGGACGACCAG 58.677 45.455 4.48 0.00 35.59 4.00
326 327 3.006110 ACTTTTAATGACGGACGACCAGA 59.994 43.478 4.48 0.00 35.59 3.86
327 328 3.663995 TTTAATGACGGACGACCAGAA 57.336 42.857 4.48 0.00 35.59 3.02
328 329 2.933495 TAATGACGGACGACCAGAAG 57.067 50.000 4.48 0.00 35.59 2.85
329 330 0.389948 AATGACGGACGACCAGAAGC 60.390 55.000 4.48 0.00 35.59 3.86
330 331 1.251527 ATGACGGACGACCAGAAGCT 61.252 55.000 4.48 0.00 35.59 3.74
331 332 0.607217 TGACGGACGACCAGAAGCTA 60.607 55.000 4.48 0.00 35.59 3.32
332 333 0.739561 GACGGACGACCAGAAGCTAT 59.260 55.000 4.48 0.00 35.59 2.97
333 334 1.945394 GACGGACGACCAGAAGCTATA 59.055 52.381 4.48 0.00 35.59 1.31
334 335 1.948145 ACGGACGACCAGAAGCTATAG 59.052 52.381 4.48 0.00 35.59 1.31
335 336 1.335142 CGGACGACCAGAAGCTATAGC 60.335 57.143 17.33 17.33 37.39 2.97
336 337 1.000052 GGACGACCAGAAGCTATAGCC 60.000 57.143 21.17 6.99 37.72 3.93
337 338 0.669077 ACGACCAGAAGCTATAGCCG 59.331 55.000 21.17 16.74 43.38 5.52
338 339 0.664767 CGACCAGAAGCTATAGCCGC 60.665 60.000 21.17 13.13 43.38 6.53
339 340 0.676736 GACCAGAAGCTATAGCCGCT 59.323 55.000 21.17 15.18 43.38 5.52
341 342 1.486726 ACCAGAAGCTATAGCCGCTTT 59.513 47.619 21.17 8.85 46.85 3.51
342 343 2.698797 ACCAGAAGCTATAGCCGCTTTA 59.301 45.455 21.17 0.00 46.85 1.85
343 344 3.325135 ACCAGAAGCTATAGCCGCTTTAT 59.675 43.478 21.17 3.48 46.85 1.40
344 345 4.202367 ACCAGAAGCTATAGCCGCTTTATT 60.202 41.667 21.17 6.96 46.85 1.40
345 346 5.011738 ACCAGAAGCTATAGCCGCTTTATTA 59.988 40.000 21.17 0.00 46.85 0.98
346 347 5.932303 CCAGAAGCTATAGCCGCTTTATTAA 59.068 40.000 21.17 0.00 46.85 1.40
347 348 6.595716 CCAGAAGCTATAGCCGCTTTATTAAT 59.404 38.462 21.17 0.00 46.85 1.40
348 349 7.764443 CCAGAAGCTATAGCCGCTTTATTAATA 59.236 37.037 21.17 0.00 46.85 0.98
349 350 8.596380 CAGAAGCTATAGCCGCTTTATTAATAC 58.404 37.037 21.17 0.00 46.85 1.89
350 351 8.311836 AGAAGCTATAGCCGCTTTATTAATACA 58.688 33.333 21.17 0.00 46.85 2.29
351 352 7.829378 AGCTATAGCCGCTTTATTAATACAC 57.171 36.000 21.17 0.00 43.38 2.90
352 353 6.530534 AGCTATAGCCGCTTTATTAATACACG 59.469 38.462 21.17 0.00 43.38 4.49
353 354 3.872560 AGCCGCTTTATTAATACACGC 57.127 42.857 0.00 0.00 0.00 5.34
354 355 3.199677 AGCCGCTTTATTAATACACGCA 58.800 40.909 0.00 0.00 0.00 5.24
355 356 3.001939 AGCCGCTTTATTAATACACGCAC 59.998 43.478 0.00 0.00 0.00 5.34
356 357 3.847105 GCCGCTTTATTAATACACGCACC 60.847 47.826 0.00 0.00 0.00 5.01
357 358 3.528121 CGCTTTATTAATACACGCACCG 58.472 45.455 0.00 0.00 0.00 4.94
358 359 3.243410 CGCTTTATTAATACACGCACCGA 59.757 43.478 0.00 0.00 0.00 4.69
359 360 4.259890 CGCTTTATTAATACACGCACCGAA 60.260 41.667 0.00 0.00 0.00 4.30
360 361 4.959757 GCTTTATTAATACACGCACCGAAC 59.040 41.667 0.00 0.00 0.00 3.95
361 362 5.446206 GCTTTATTAATACACGCACCGAACA 60.446 40.000 0.00 0.00 0.00 3.18
362 363 6.665474 TTTATTAATACACGCACCGAACAT 57.335 33.333 0.00 0.00 0.00 2.71
363 364 4.789095 ATTAATACACGCACCGAACATC 57.211 40.909 0.00 0.00 0.00 3.06
364 365 1.365699 AATACACGCACCGAACATCC 58.634 50.000 0.00 0.00 0.00 3.51
365 366 0.461339 ATACACGCACCGAACATCCC 60.461 55.000 0.00 0.00 0.00 3.85
366 367 1.817911 TACACGCACCGAACATCCCA 61.818 55.000 0.00 0.00 0.00 4.37
367 368 1.963855 CACGCACCGAACATCCCAA 60.964 57.895 0.00 0.00 0.00 4.12
368 369 1.228003 ACGCACCGAACATCCCAAA 60.228 52.632 0.00 0.00 0.00 3.28
369 370 0.820074 ACGCACCGAACATCCCAAAA 60.820 50.000 0.00 0.00 0.00 2.44
370 371 0.312416 CGCACCGAACATCCCAAAAA 59.688 50.000 0.00 0.00 0.00 1.94
371 372 1.067915 CGCACCGAACATCCCAAAAAT 60.068 47.619 0.00 0.00 0.00 1.82
372 373 2.162608 CGCACCGAACATCCCAAAAATA 59.837 45.455 0.00 0.00 0.00 1.40
373 374 3.181491 CGCACCGAACATCCCAAAAATAT 60.181 43.478 0.00 0.00 0.00 1.28
374 375 4.359706 GCACCGAACATCCCAAAAATATC 58.640 43.478 0.00 0.00 0.00 1.63
375 376 4.736464 GCACCGAACATCCCAAAAATATCC 60.736 45.833 0.00 0.00 0.00 2.59
376 377 4.400884 CACCGAACATCCCAAAAATATCCA 59.599 41.667 0.00 0.00 0.00 3.41
377 378 4.644685 ACCGAACATCCCAAAAATATCCAG 59.355 41.667 0.00 0.00 0.00 3.86
378 379 4.887071 CCGAACATCCCAAAAATATCCAGA 59.113 41.667 0.00 0.00 0.00 3.86
379 380 5.359576 CCGAACATCCCAAAAATATCCAGAA 59.640 40.000 0.00 0.00 0.00 3.02
380 381 6.127479 CCGAACATCCCAAAAATATCCAGAAA 60.127 38.462 0.00 0.00 0.00 2.52
381 382 7.319646 CGAACATCCCAAAAATATCCAGAAAA 58.680 34.615 0.00 0.00 0.00 2.29
382 383 7.816995 CGAACATCCCAAAAATATCCAGAAAAA 59.183 33.333 0.00 0.00 0.00 1.94
424 425 8.413229 CAAATAGAAACAGAAAGGAACAAAGGA 58.587 33.333 0.00 0.00 0.00 3.36
438 439 1.209261 CAAAGGAAGAGAGAGGAGGGC 59.791 57.143 0.00 0.00 0.00 5.19
439 440 0.326143 AAGGAAGAGAGAGGAGGGCC 60.326 60.000 0.00 0.00 0.00 5.80
441 442 1.380650 GAAGAGAGAGGAGGGCCGT 60.381 63.158 0.00 0.00 39.96 5.68
442 443 0.106619 GAAGAGAGAGGAGGGCCGTA 60.107 60.000 0.00 0.00 39.96 4.02
444 445 0.111639 AGAGAGAGGAGGGCCGTATC 59.888 60.000 0.00 0.00 39.96 2.24
446 447 1.528776 GAGAGGAGGGCCGTATCGT 60.529 63.158 0.00 0.00 39.96 3.73
462 463 2.684001 TCGTACAGGTAATGGGCTTG 57.316 50.000 0.00 0.00 0.00 4.01
465 466 2.167693 CGTACAGGTAATGGGCTTGAGA 59.832 50.000 0.00 0.00 0.00 3.27
466 467 3.369052 CGTACAGGTAATGGGCTTGAGAA 60.369 47.826 0.00 0.00 0.00 2.87
467 468 3.806949 ACAGGTAATGGGCTTGAGAAA 57.193 42.857 0.00 0.00 0.00 2.52
472 473 4.079253 GGTAATGGGCTTGAGAAAGTTGA 58.921 43.478 0.00 0.00 0.00 3.18
479 480 4.321527 GGGCTTGAGAAAGTTGAGGAATTG 60.322 45.833 0.00 0.00 0.00 2.32
483 484 6.377327 TTGAGAAAGTTGAGGAATTGACAC 57.623 37.500 0.00 0.00 0.00 3.67
484 485 5.684704 TGAGAAAGTTGAGGAATTGACACT 58.315 37.500 0.00 0.00 0.00 3.55
485 486 5.760253 TGAGAAAGTTGAGGAATTGACACTC 59.240 40.000 0.00 0.00 0.00 3.51
508 509 7.432252 ACTCAAATTTGTGATCAGTCGAAAAAC 59.568 33.333 23.24 0.00 0.00 2.43
509 510 6.695278 TCAAATTTGTGATCAGTCGAAAAACC 59.305 34.615 17.47 0.00 0.00 3.27
513 514 2.484264 GTGATCAGTCGAAAAACCCAGG 59.516 50.000 0.00 0.00 0.00 4.45
518 519 2.290641 CAGTCGAAAAACCCAGGTCAAG 59.709 50.000 0.00 0.00 0.00 3.02
559 567 3.541130 CGCAAATCTCAAAGCAGAAATCG 59.459 43.478 0.00 0.00 0.00 3.34
570 578 5.964958 AAGCAGAAATCGATGAGGAAAAA 57.035 34.783 0.00 0.00 0.00 1.94
593 601 6.478512 AAAAACTAGCTGACCCAAAATCAA 57.521 33.333 0.00 0.00 0.00 2.57
599 607 5.813513 AGCTGACCCAAAATCAATTTTCT 57.186 34.783 0.00 0.00 37.86 2.52
604 612 4.644498 ACCCAAAATCAATTTTCTGGCAG 58.356 39.130 8.58 8.58 37.86 4.85
605 613 4.102996 ACCCAAAATCAATTTTCTGGCAGT 59.897 37.500 15.27 0.00 37.86 4.40
607 615 5.532032 CCCAAAATCAATTTTCTGGCAGTTT 59.468 36.000 15.27 1.96 37.86 2.66
614 622 9.590451 AATCAATTTTCTGGCAGTTTACATATG 57.410 29.630 15.27 0.00 0.00 1.78
635 643 5.744666 TGGCTAAAATGATTTACGCCTAC 57.255 39.130 22.50 5.89 41.21 3.18
639 647 6.691388 GGCTAAAATGATTTACGCCTACAAAG 59.309 38.462 17.80 0.00 39.55 2.77
640 648 6.691388 GCTAAAATGATTTACGCCTACAAAGG 59.309 38.462 0.00 0.00 46.76 3.11
694 703 6.428385 ACAGTGAAGCTAATCAAACTATGC 57.572 37.500 0.00 0.00 0.00 3.14
698 709 8.333908 CAGTGAAGCTAATCAAACTATGCTTAG 58.666 37.037 5.13 5.13 40.26 2.18
771 782 1.004200 TTTCCCGGCTCCGAAAGAC 60.004 57.895 10.28 0.00 42.83 3.01
784 795 3.192103 AAAGACAGACGGCACCCCC 62.192 63.158 0.00 0.00 0.00 5.40
813 824 0.753262 TCGAAGCCCTCCATAAGCTC 59.247 55.000 0.00 0.00 35.30 4.09
819 830 1.216990 CCCTCCATAAGCTCAACCCT 58.783 55.000 0.00 0.00 0.00 4.34
1024 1035 2.124695 GGAACATGACGGGGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
1239 1289 0.252881 AGCTCCTCCTGGTTGGATCA 60.253 55.000 10.56 0.00 45.16 2.92
1258 1308 6.288426 GATCATCTGATCCGCATATGATTG 57.712 41.667 6.97 0.00 45.46 2.67
1259 1309 3.937079 TCATCTGATCCGCATATGATTGC 59.063 43.478 6.97 0.00 35.80 3.56
1260 1310 3.690475 TCTGATCCGCATATGATTGCT 57.310 42.857 6.97 0.00 40.54 3.91
1261 1311 3.332034 TCTGATCCGCATATGATTGCTG 58.668 45.455 6.97 0.00 40.54 4.41
1262 1312 1.808343 TGATCCGCATATGATTGCTGC 59.192 47.619 6.97 0.00 40.54 5.25
1263 1313 1.808343 GATCCGCATATGATTGCTGCA 59.192 47.619 6.97 0.00 40.54 4.41
1264 1314 1.232119 TCCGCATATGATTGCTGCAG 58.768 50.000 10.11 10.11 40.54 4.41
1265 1315 1.202675 TCCGCATATGATTGCTGCAGA 60.203 47.619 20.43 0.00 40.54 4.26
1266 1316 1.810755 CCGCATATGATTGCTGCAGAT 59.189 47.619 20.43 1.92 40.54 2.90
1267 1317 2.159558 CCGCATATGATTGCTGCAGATC 60.160 50.000 20.43 13.19 40.54 2.75
1268 1318 2.474032 CGCATATGATTGCTGCAGATCG 60.474 50.000 20.43 1.04 40.54 3.69
1377 1558 5.070770 TGCATCTCTTTTGTTGTTGTTGT 57.929 34.783 0.00 0.00 0.00 3.32
1381 1562 6.670452 GCATCTCTTTTGTTGTTGTTGTTGTG 60.670 38.462 0.00 0.00 0.00 3.33
1382 1563 4.683781 TCTCTTTTGTTGTTGTTGTTGTGC 59.316 37.500 0.00 0.00 0.00 4.57
1453 1644 4.202050 GGATGCATACAACCAGTCAAATCC 60.202 45.833 3.28 0.00 38.58 3.01
1461 1652 2.354328 ACCAGTCAAATCCCCTAACCA 58.646 47.619 0.00 0.00 0.00 3.67
1466 1657 3.141272 AGTCAAATCCCCTAACCACCAAA 59.859 43.478 0.00 0.00 0.00 3.28
1479 1671 3.347216 ACCACCAAAGGAGAATCATTCG 58.653 45.455 0.00 0.00 38.69 3.34
1514 1706 7.309194 GGTTGACTTAATGTACTCCATTGCTTT 60.309 37.037 0.00 0.00 43.63 3.51
1515 1707 7.759489 TGACTTAATGTACTCCATTGCTTTT 57.241 32.000 0.00 0.00 43.63 2.27
1516 1708 7.816640 TGACTTAATGTACTCCATTGCTTTTC 58.183 34.615 0.00 0.00 43.63 2.29
1517 1709 6.842163 ACTTAATGTACTCCATTGCTTTTCG 58.158 36.000 0.00 0.00 43.63 3.46
1527 1719 6.485648 ACTCCATTGCTTTTCGTACTACTTTT 59.514 34.615 0.00 0.00 0.00 2.27
1541 1733 7.859377 TCGTACTACTTTTTGTACAAGAGACAG 59.141 37.037 21.14 18.43 39.00 3.51
1603 1804 5.933790 TGAAATCCGCACAACTACAATAAC 58.066 37.500 0.00 0.00 0.00 1.89
1610 1838 5.163663 CCGCACAACTACAATAACATGGAAT 60.164 40.000 0.00 0.00 0.00 3.01
1634 1862 2.738643 CGATGAAGTGCCGTCCTACAAT 60.739 50.000 0.00 0.00 0.00 2.71
1683 1911 6.528423 AGAAACAGAAATACTCATCTCGAACG 59.472 38.462 0.00 0.00 0.00 3.95
1686 1914 6.849502 ACAGAAATACTCATCTCGAACGTAA 58.150 36.000 0.00 0.00 0.00 3.18
1711 1941 6.979238 AGTACATTTTGAGCGTAGAACTATCC 59.021 38.462 0.00 0.00 0.00 2.59
1741 1971 4.298626 ACTATCCCTGCCTCATCTACAAA 58.701 43.478 0.00 0.00 0.00 2.83
1753 1983 4.002982 TCATCTACAAACTGCCATGACAC 58.997 43.478 0.00 0.00 0.00 3.67
1754 1984 2.412870 TCTACAAACTGCCATGACACG 58.587 47.619 0.00 0.00 0.00 4.49
1755 1985 2.036604 TCTACAAACTGCCATGACACGA 59.963 45.455 0.00 0.00 0.00 4.35
1765 1995 2.609491 GCCATGACACGAGACAACACTA 60.609 50.000 0.00 0.00 0.00 2.74
1783 2013 2.296471 ACTACGTAGCTGCTGTTCAGTT 59.704 45.455 22.40 0.00 44.66 3.16
1788 2018 2.855209 AGCTGCTGTTCAGTTCAGAT 57.145 45.000 0.00 3.12 44.66 2.90
1814 2045 2.547211 TGTTGGAAATTTTGCATTGCCG 59.453 40.909 6.12 0.00 28.87 5.69
1817 2048 1.136000 GGAAATTTTGCATTGCCGCAC 60.136 47.619 6.12 0.00 42.87 5.34
1843 2074 2.997897 GCAGACGGACAGAGGGGT 60.998 66.667 0.00 0.00 0.00 4.95
1845 2076 2.997897 AGACGGACAGAGGGGTGC 60.998 66.667 0.00 0.00 0.00 5.01
1846 2077 4.083862 GACGGACAGAGGGGTGCC 62.084 72.222 0.00 0.00 0.00 5.01
1863 2094 1.442526 GCCGCCACCATCATCTGAAG 61.443 60.000 0.00 0.00 0.00 3.02
1869 2100 2.094026 CCACCATCATCTGAAGTCGTGA 60.094 50.000 0.00 0.00 0.00 4.35
1871 2102 4.186926 CACCATCATCTGAAGTCGTGAAT 58.813 43.478 0.00 0.00 0.00 2.57
1872 2103 4.033702 CACCATCATCTGAAGTCGTGAATG 59.966 45.833 0.00 0.00 0.00 2.67
1874 2105 5.055144 CCATCATCTGAAGTCGTGAATGAT 58.945 41.667 0.00 0.00 0.00 2.45
1875 2106 5.177142 CCATCATCTGAAGTCGTGAATGATC 59.823 44.000 0.00 0.00 0.00 2.92
1877 2108 5.970592 TCATCTGAAGTCGTGAATGATCTT 58.029 37.500 0.00 0.00 0.00 2.40
1878 2109 6.038985 TCATCTGAAGTCGTGAATGATCTTC 58.961 40.000 0.00 0.00 36.20 2.87
1879 2110 5.391312 TCTGAAGTCGTGAATGATCTTCA 57.609 39.130 12.68 12.68 41.00 3.02
1881 2112 5.391312 TGAAGTCGTGAATGATCTTCAGA 57.609 39.130 7.56 5.82 39.27 3.27
1882 2113 5.783111 TGAAGTCGTGAATGATCTTCAGAA 58.217 37.500 7.56 0.00 39.27 3.02
1981 2212 4.538283 ACGATCAGCGCGACCTCG 62.538 66.667 12.10 14.57 46.04 4.63
2023 2254 2.747446 GCCGAAGATTTTGAGGTAGCAA 59.253 45.455 0.00 0.00 0.00 3.91
2059 2290 2.202987 GAGGCCATGACGCTGAGG 60.203 66.667 5.01 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.198853 TGGGGCTTTACTTGCTTGTTTTT 59.801 39.130 0.00 0.00 0.00 1.94
19 20 2.769095 TGGGGCTTTACTTGCTTGTTTT 59.231 40.909 0.00 0.00 0.00 2.43
20 21 2.102420 GTGGGGCTTTACTTGCTTGTTT 59.898 45.455 0.00 0.00 0.00 2.83
21 22 1.686587 GTGGGGCTTTACTTGCTTGTT 59.313 47.619 0.00 0.00 0.00 2.83
22 23 1.328279 GTGGGGCTTTACTTGCTTGT 58.672 50.000 0.00 0.00 0.00 3.16
23 24 1.327303 TGTGGGGCTTTACTTGCTTG 58.673 50.000 0.00 0.00 0.00 4.01
24 25 2.080654 TTGTGGGGCTTTACTTGCTT 57.919 45.000 0.00 0.00 0.00 3.91
25 26 2.080654 TTTGTGGGGCTTTACTTGCT 57.919 45.000 0.00 0.00 0.00 3.91
26 27 2.612721 CCATTTGTGGGGCTTTACTTGC 60.613 50.000 0.00 0.00 0.00 4.01
27 28 2.028203 CCCATTTGTGGGGCTTTACTTG 60.028 50.000 5.56 0.00 45.34 3.16
28 29 2.256306 CCCATTTGTGGGGCTTTACTT 58.744 47.619 5.56 0.00 45.34 2.24
29 30 1.937191 CCCATTTGTGGGGCTTTACT 58.063 50.000 5.56 0.00 45.34 2.24
48 49 1.902918 TATGCATTCATGGGCCGGC 60.903 57.895 21.18 21.18 34.22 6.13
49 50 0.822944 TGTATGCATTCATGGGCCGG 60.823 55.000 3.54 0.00 34.22 6.13
50 51 1.068125 CATGTATGCATTCATGGGCCG 60.068 52.381 29.02 11.01 38.10 6.13
51 52 2.736144 CATGTATGCATTCATGGGCC 57.264 50.000 29.02 0.00 38.10 5.80
55 56 4.456911 GTCCTACCCATGTATGCATTCATG 59.543 45.833 29.47 29.47 40.46 3.07
56 57 4.104579 TGTCCTACCCATGTATGCATTCAT 59.895 41.667 12.58 12.58 36.73 2.57
57 58 3.457749 TGTCCTACCCATGTATGCATTCA 59.542 43.478 3.54 6.47 31.99 2.57
58 59 4.085357 TGTCCTACCCATGTATGCATTC 57.915 45.455 3.54 0.00 31.99 2.67
59 60 4.401022 CATGTCCTACCCATGTATGCATT 58.599 43.478 3.54 0.00 35.94 3.56
60 61 3.811810 GCATGTCCTACCCATGTATGCAT 60.812 47.826 3.79 3.79 41.38 3.96
61 62 2.487086 GCATGTCCTACCCATGTATGCA 60.487 50.000 0.00 0.00 41.38 3.96
62 63 2.154462 GCATGTCCTACCCATGTATGC 58.846 52.381 0.00 0.00 41.38 3.14
63 64 2.224281 ACGCATGTCCTACCCATGTATG 60.224 50.000 0.00 0.00 41.38 2.39
64 65 2.047061 ACGCATGTCCTACCCATGTAT 58.953 47.619 0.00 0.00 41.38 2.29
65 66 1.138069 CACGCATGTCCTACCCATGTA 59.862 52.381 0.00 0.00 41.38 2.29
66 67 0.107703 CACGCATGTCCTACCCATGT 60.108 55.000 0.00 0.00 41.38 3.21
67 68 0.177836 TCACGCATGTCCTACCCATG 59.822 55.000 0.00 0.00 42.06 3.66
68 69 0.465705 CTCACGCATGTCCTACCCAT 59.534 55.000 0.00 0.00 0.00 4.00
69 70 0.613572 TCTCACGCATGTCCTACCCA 60.614 55.000 0.00 0.00 0.00 4.51
70 71 0.535335 TTCTCACGCATGTCCTACCC 59.465 55.000 0.00 0.00 0.00 3.69
71 72 2.380084 TTTCTCACGCATGTCCTACC 57.620 50.000 0.00 0.00 0.00 3.18
72 73 3.585862 TCTTTTCTCACGCATGTCCTAC 58.414 45.455 0.00 0.00 0.00 3.18
73 74 3.953712 TCTTTTCTCACGCATGTCCTA 57.046 42.857 0.00 0.00 0.00 2.94
74 75 2.839486 TCTTTTCTCACGCATGTCCT 57.161 45.000 0.00 0.00 0.00 3.85
75 76 3.498397 TCTTTCTTTTCTCACGCATGTCC 59.502 43.478 0.00 0.00 0.00 4.02
76 77 4.732285 TCTTTCTTTTCTCACGCATGTC 57.268 40.909 0.00 0.00 0.00 3.06
77 78 6.801539 TTATCTTTCTTTTCTCACGCATGT 57.198 33.333 0.00 0.00 0.00 3.21
78 79 8.506140 TTTTTATCTTTCTTTTCTCACGCATG 57.494 30.769 0.00 0.00 0.00 4.06
79 80 8.352942 ACTTTTTATCTTTCTTTTCTCACGCAT 58.647 29.630 0.00 0.00 0.00 4.73
80 81 7.643764 CACTTTTTATCTTTCTTTTCTCACGCA 59.356 33.333 0.00 0.00 0.00 5.24
81 82 7.644157 ACACTTTTTATCTTTCTTTTCTCACGC 59.356 33.333 0.00 0.00 0.00 5.34
82 83 8.947940 CACACTTTTTATCTTTCTTTTCTCACG 58.052 33.333 0.00 0.00 0.00 4.35
87 88 9.175060 GCTCTCACACTTTTTATCTTTCTTTTC 57.825 33.333 0.00 0.00 0.00 2.29
88 89 8.907885 AGCTCTCACACTTTTTATCTTTCTTTT 58.092 29.630 0.00 0.00 0.00 2.27
89 90 8.457238 AGCTCTCACACTTTTTATCTTTCTTT 57.543 30.769 0.00 0.00 0.00 2.52
90 91 9.213799 CTAGCTCTCACACTTTTTATCTTTCTT 57.786 33.333 0.00 0.00 0.00 2.52
91 92 7.821846 CCTAGCTCTCACACTTTTTATCTTTCT 59.178 37.037 0.00 0.00 0.00 2.52
92 93 7.065204 CCCTAGCTCTCACACTTTTTATCTTTC 59.935 40.741 0.00 0.00 0.00 2.62
93 94 6.881602 CCCTAGCTCTCACACTTTTTATCTTT 59.118 38.462 0.00 0.00 0.00 2.52
94 95 6.213600 TCCCTAGCTCTCACACTTTTTATCTT 59.786 38.462 0.00 0.00 0.00 2.40
95 96 5.721960 TCCCTAGCTCTCACACTTTTTATCT 59.278 40.000 0.00 0.00 0.00 1.98
96 97 5.978814 TCCCTAGCTCTCACACTTTTTATC 58.021 41.667 0.00 0.00 0.00 1.75
97 98 6.567602 ATCCCTAGCTCTCACACTTTTTAT 57.432 37.500 0.00 0.00 0.00 1.40
98 99 6.013725 TCAATCCCTAGCTCTCACACTTTTTA 60.014 38.462 0.00 0.00 0.00 1.52
99 100 4.917906 ATCCCTAGCTCTCACACTTTTT 57.082 40.909 0.00 0.00 0.00 1.94
100 101 4.287067 TCAATCCCTAGCTCTCACACTTTT 59.713 41.667 0.00 0.00 0.00 2.27
101 102 3.840666 TCAATCCCTAGCTCTCACACTTT 59.159 43.478 0.00 0.00 0.00 2.66
102 103 3.445008 TCAATCCCTAGCTCTCACACTT 58.555 45.455 0.00 0.00 0.00 3.16
103 104 3.107402 TCAATCCCTAGCTCTCACACT 57.893 47.619 0.00 0.00 0.00 3.55
104 105 3.526534 GTTCAATCCCTAGCTCTCACAC 58.473 50.000 0.00 0.00 0.00 3.82
105 106 2.501723 GGTTCAATCCCTAGCTCTCACA 59.498 50.000 0.00 0.00 0.00 3.58
106 107 2.158885 GGGTTCAATCCCTAGCTCTCAC 60.159 54.545 0.00 0.00 43.85 3.51
107 108 2.119495 GGGTTCAATCCCTAGCTCTCA 58.881 52.381 0.00 0.00 43.85 3.27
108 109 2.920724 GGGTTCAATCCCTAGCTCTC 57.079 55.000 0.00 0.00 43.85 3.20
117 118 3.879892 GCAATGAGACTAGGGTTCAATCC 59.120 47.826 0.00 0.00 0.00 3.01
118 119 3.879892 GGCAATGAGACTAGGGTTCAATC 59.120 47.826 0.00 0.00 0.00 2.67
119 120 3.266772 TGGCAATGAGACTAGGGTTCAAT 59.733 43.478 0.00 0.00 0.00 2.57
120 121 2.642311 TGGCAATGAGACTAGGGTTCAA 59.358 45.455 0.00 0.00 0.00 2.69
121 122 2.237143 CTGGCAATGAGACTAGGGTTCA 59.763 50.000 0.00 0.00 0.00 3.18
122 123 2.501723 TCTGGCAATGAGACTAGGGTTC 59.498 50.000 0.00 0.00 0.00 3.62
123 124 2.551270 TCTGGCAATGAGACTAGGGTT 58.449 47.619 0.00 0.00 0.00 4.11
124 125 2.254152 TCTGGCAATGAGACTAGGGT 57.746 50.000 0.00 0.00 0.00 4.34
125 126 2.768527 TCTTCTGGCAATGAGACTAGGG 59.231 50.000 0.00 0.00 0.00 3.53
126 127 4.344679 AGATCTTCTGGCAATGAGACTAGG 59.655 45.833 0.00 0.00 0.00 3.02
127 128 5.534207 AGATCTTCTGGCAATGAGACTAG 57.466 43.478 0.00 0.00 0.00 2.57
128 129 5.303078 GGTAGATCTTCTGGCAATGAGACTA 59.697 44.000 0.00 0.00 0.00 2.59
129 130 4.100808 GGTAGATCTTCTGGCAATGAGACT 59.899 45.833 0.00 0.00 0.00 3.24
130 131 4.141846 TGGTAGATCTTCTGGCAATGAGAC 60.142 45.833 0.00 0.00 0.00 3.36
131 132 4.033009 TGGTAGATCTTCTGGCAATGAGA 58.967 43.478 0.00 0.00 0.00 3.27
132 133 4.378774 CTGGTAGATCTTCTGGCAATGAG 58.621 47.826 0.00 0.00 0.00 2.90
133 134 3.432749 GCTGGTAGATCTTCTGGCAATGA 60.433 47.826 0.00 0.00 0.00 2.57
134 135 2.877168 GCTGGTAGATCTTCTGGCAATG 59.123 50.000 0.00 0.00 0.00 2.82
135 136 2.158696 GGCTGGTAGATCTTCTGGCAAT 60.159 50.000 0.00 0.00 0.00 3.56
136 137 1.210478 GGCTGGTAGATCTTCTGGCAA 59.790 52.381 0.00 0.00 0.00 4.52
137 138 0.833287 GGCTGGTAGATCTTCTGGCA 59.167 55.000 0.00 0.00 0.00 4.92
138 139 0.833287 TGGCTGGTAGATCTTCTGGC 59.167 55.000 0.00 10.80 0.00 4.85
139 140 2.420687 GGTTGGCTGGTAGATCTTCTGG 60.421 54.545 0.00 0.00 0.00 3.86
140 141 2.237143 TGGTTGGCTGGTAGATCTTCTG 59.763 50.000 0.00 0.00 0.00 3.02
141 142 2.237392 GTGGTTGGCTGGTAGATCTTCT 59.763 50.000 0.00 0.00 0.00 2.85
142 143 2.237392 AGTGGTTGGCTGGTAGATCTTC 59.763 50.000 0.00 0.00 0.00 2.87
143 144 2.237392 GAGTGGTTGGCTGGTAGATCTT 59.763 50.000 0.00 0.00 0.00 2.40
144 145 1.834263 GAGTGGTTGGCTGGTAGATCT 59.166 52.381 0.00 0.00 0.00 2.75
145 146 1.834263 AGAGTGGTTGGCTGGTAGATC 59.166 52.381 0.00 0.00 0.00 2.75
146 147 1.556911 CAGAGTGGTTGGCTGGTAGAT 59.443 52.381 0.00 0.00 0.00 1.98
147 148 0.976641 CAGAGTGGTTGGCTGGTAGA 59.023 55.000 0.00 0.00 0.00 2.59
148 149 0.674895 GCAGAGTGGTTGGCTGGTAG 60.675 60.000 0.00 0.00 0.00 3.18
149 150 1.374947 GCAGAGTGGTTGGCTGGTA 59.625 57.895 0.00 0.00 0.00 3.25
150 151 2.113986 GCAGAGTGGTTGGCTGGT 59.886 61.111 0.00 0.00 0.00 4.00
151 152 2.674380 GGCAGAGTGGTTGGCTGG 60.674 66.667 0.00 0.00 38.03 4.85
152 153 0.896940 AATGGCAGAGTGGTTGGCTG 60.897 55.000 0.00 0.00 41.29 4.85
153 154 0.610232 GAATGGCAGAGTGGTTGGCT 60.610 55.000 0.00 0.00 41.29 4.75
154 155 0.895100 TGAATGGCAGAGTGGTTGGC 60.895 55.000 0.00 0.00 41.12 4.52
155 156 1.843368 ATGAATGGCAGAGTGGTTGG 58.157 50.000 0.00 0.00 0.00 3.77
156 157 3.947910 AAATGAATGGCAGAGTGGTTG 57.052 42.857 0.00 0.00 0.00 3.77
157 158 4.590222 AGAAAAATGAATGGCAGAGTGGTT 59.410 37.500 0.00 0.00 0.00 3.67
158 159 4.021719 CAGAAAAATGAATGGCAGAGTGGT 60.022 41.667 0.00 0.00 0.00 4.16
159 160 4.021719 ACAGAAAAATGAATGGCAGAGTGG 60.022 41.667 0.00 0.00 0.00 4.00
160 161 4.921515 CACAGAAAAATGAATGGCAGAGTG 59.078 41.667 0.00 0.00 0.00 3.51
161 162 4.586001 ACACAGAAAAATGAATGGCAGAGT 59.414 37.500 0.00 0.00 0.00 3.24
162 163 5.130292 ACACAGAAAAATGAATGGCAGAG 57.870 39.130 0.00 0.00 0.00 3.35
163 164 6.839124 ATACACAGAAAAATGAATGGCAGA 57.161 33.333 0.00 0.00 0.00 4.26
164 165 7.318141 AGAATACACAGAAAAATGAATGGCAG 58.682 34.615 0.00 0.00 0.00 4.85
165 166 7.230849 AGAATACACAGAAAAATGAATGGCA 57.769 32.000 0.00 0.00 0.00 4.92
166 167 8.462016 AGTAGAATACACAGAAAAATGAATGGC 58.538 33.333 0.00 0.00 46.26 4.40
167 168 9.994432 GAGTAGAATACACAGAAAAATGAATGG 57.006 33.333 0.00 0.00 46.26 3.16
168 169 9.694520 CGAGTAGAATACACAGAAAAATGAATG 57.305 33.333 0.00 0.00 46.26 2.67
169 170 9.436957 ACGAGTAGAATACACAGAAAAATGAAT 57.563 29.630 0.00 0.00 46.26 2.57
170 171 8.827177 ACGAGTAGAATACACAGAAAAATGAA 57.173 30.769 0.00 0.00 46.26 2.57
171 172 7.272731 CGACGAGTAGAATACACAGAAAAATGA 59.727 37.037 0.00 0.00 46.26 2.57
172 173 7.384124 CGACGAGTAGAATACACAGAAAAATG 58.616 38.462 0.00 0.00 46.26 2.32
173 174 6.034683 GCGACGAGTAGAATACACAGAAAAAT 59.965 38.462 0.00 0.00 46.26 1.82
174 175 5.344128 GCGACGAGTAGAATACACAGAAAAA 59.656 40.000 0.00 0.00 46.26 1.94
175 176 4.855388 GCGACGAGTAGAATACACAGAAAA 59.145 41.667 0.00 0.00 46.26 2.29
176 177 4.155462 AGCGACGAGTAGAATACACAGAAA 59.845 41.667 0.00 0.00 46.26 2.52
177 178 3.688185 AGCGACGAGTAGAATACACAGAA 59.312 43.478 0.00 0.00 46.26 3.02
178 179 3.268330 AGCGACGAGTAGAATACACAGA 58.732 45.455 0.00 0.00 46.26 3.41
179 180 3.546417 GGAGCGACGAGTAGAATACACAG 60.546 52.174 0.00 0.00 46.26 3.66
180 181 2.353889 GGAGCGACGAGTAGAATACACA 59.646 50.000 0.00 0.00 46.26 3.72
181 182 2.286891 GGGAGCGACGAGTAGAATACAC 60.287 54.545 0.00 0.00 46.26 2.90
182 183 1.945394 GGGAGCGACGAGTAGAATACA 59.055 52.381 0.00 0.00 46.26 2.29
183 184 1.266446 GGGGAGCGACGAGTAGAATAC 59.734 57.143 0.00 0.00 43.47 1.89
184 185 1.142465 AGGGGAGCGACGAGTAGAATA 59.858 52.381 0.00 0.00 0.00 1.75
185 186 0.106619 AGGGGAGCGACGAGTAGAAT 60.107 55.000 0.00 0.00 0.00 2.40
186 187 0.543277 TAGGGGAGCGACGAGTAGAA 59.457 55.000 0.00 0.00 0.00 2.10
187 188 0.763652 ATAGGGGAGCGACGAGTAGA 59.236 55.000 0.00 0.00 0.00 2.59
188 189 2.469274 TATAGGGGAGCGACGAGTAG 57.531 55.000 0.00 0.00 0.00 2.57
189 190 2.936919 TTATAGGGGAGCGACGAGTA 57.063 50.000 0.00 0.00 0.00 2.59
190 191 2.062971 TTTATAGGGGAGCGACGAGT 57.937 50.000 0.00 0.00 0.00 4.18
191 192 2.100252 TGTTTTATAGGGGAGCGACGAG 59.900 50.000 0.00 0.00 0.00 4.18
192 193 2.101783 TGTTTTATAGGGGAGCGACGA 58.898 47.619 0.00 0.00 0.00 4.20
193 194 2.589798 TGTTTTATAGGGGAGCGACG 57.410 50.000 0.00 0.00 0.00 5.12
194 195 4.448210 TCATTGTTTTATAGGGGAGCGAC 58.552 43.478 0.00 0.00 0.00 5.19
195 196 4.764050 TCATTGTTTTATAGGGGAGCGA 57.236 40.909 0.00 0.00 0.00 4.93
196 197 4.275936 CCTTCATTGTTTTATAGGGGAGCG 59.724 45.833 0.00 0.00 0.00 5.03
197 198 5.445964 TCCTTCATTGTTTTATAGGGGAGC 58.554 41.667 0.00 0.00 0.00 4.70
198 199 6.064717 CCTCCTTCATTGTTTTATAGGGGAG 58.935 44.000 0.00 0.00 37.10 4.30
199 200 5.494706 ACCTCCTTCATTGTTTTATAGGGGA 59.505 40.000 0.00 0.00 0.00 4.81
200 201 5.594317 CACCTCCTTCATTGTTTTATAGGGG 59.406 44.000 0.00 0.00 0.00 4.79
201 202 5.594317 CCACCTCCTTCATTGTTTTATAGGG 59.406 44.000 0.00 0.00 0.00 3.53
202 203 5.067805 GCCACCTCCTTCATTGTTTTATAGG 59.932 44.000 0.00 0.00 0.00 2.57
203 204 5.220854 CGCCACCTCCTTCATTGTTTTATAG 60.221 44.000 0.00 0.00 0.00 1.31
204 205 4.638421 CGCCACCTCCTTCATTGTTTTATA 59.362 41.667 0.00 0.00 0.00 0.98
205 206 3.443681 CGCCACCTCCTTCATTGTTTTAT 59.556 43.478 0.00 0.00 0.00 1.40
206 207 2.817258 CGCCACCTCCTTCATTGTTTTA 59.183 45.455 0.00 0.00 0.00 1.52
207 208 1.613437 CGCCACCTCCTTCATTGTTTT 59.387 47.619 0.00 0.00 0.00 2.43
208 209 1.202879 TCGCCACCTCCTTCATTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
209 210 0.400213 TCGCCACCTCCTTCATTGTT 59.600 50.000 0.00 0.00 0.00 2.83
210 211 0.620556 ATCGCCACCTCCTTCATTGT 59.379 50.000 0.00 0.00 0.00 2.71
211 212 1.755179 AATCGCCACCTCCTTCATTG 58.245 50.000 0.00 0.00 0.00 2.82
212 213 2.514458 AAATCGCCACCTCCTTCATT 57.486 45.000 0.00 0.00 0.00 2.57
213 214 2.493278 CAAAAATCGCCACCTCCTTCAT 59.507 45.455 0.00 0.00 0.00 2.57
214 215 1.885887 CAAAAATCGCCACCTCCTTCA 59.114 47.619 0.00 0.00 0.00 3.02
215 216 1.202348 CCAAAAATCGCCACCTCCTTC 59.798 52.381 0.00 0.00 0.00 3.46
216 217 1.256812 CCAAAAATCGCCACCTCCTT 58.743 50.000 0.00 0.00 0.00 3.36
217 218 0.112412 ACCAAAAATCGCCACCTCCT 59.888 50.000 0.00 0.00 0.00 3.69
218 219 0.526211 GACCAAAAATCGCCACCTCC 59.474 55.000 0.00 0.00 0.00 4.30
219 220 0.526211 GGACCAAAAATCGCCACCTC 59.474 55.000 0.00 0.00 0.00 3.85
220 221 1.241315 CGGACCAAAAATCGCCACCT 61.241 55.000 0.00 0.00 0.00 4.00
221 222 1.211709 CGGACCAAAAATCGCCACC 59.788 57.895 0.00 0.00 0.00 4.61
222 223 0.594110 TTCGGACCAAAAATCGCCAC 59.406 50.000 0.00 0.00 0.00 5.01
223 224 1.319541 TTTCGGACCAAAAATCGCCA 58.680 45.000 0.00 0.00 0.00 5.69
224 225 2.425578 TTTTCGGACCAAAAATCGCC 57.574 45.000 0.00 0.00 0.00 5.54
225 226 4.446051 TCAATTTTTCGGACCAAAAATCGC 59.554 37.500 19.10 0.00 42.55 4.58
226 227 6.517914 TTCAATTTTTCGGACCAAAAATCG 57.482 33.333 19.10 13.01 42.55 3.34
227 228 7.095816 ACGATTCAATTTTTCGGACCAAAAATC 60.096 33.333 19.10 11.47 42.55 2.17
228 229 6.704050 ACGATTCAATTTTTCGGACCAAAAAT 59.296 30.769 15.72 15.72 44.34 1.82
229 230 6.043411 ACGATTCAATTTTTCGGACCAAAAA 58.957 32.000 13.44 13.44 39.09 1.94
230 231 5.593010 ACGATTCAATTTTTCGGACCAAAA 58.407 33.333 0.00 0.00 37.20 2.44
231 232 5.189659 ACGATTCAATTTTTCGGACCAAA 57.810 34.783 0.00 0.00 37.20 3.28
232 233 4.839668 ACGATTCAATTTTTCGGACCAA 57.160 36.364 0.00 0.00 37.20 3.67
233 234 4.839668 AACGATTCAATTTTTCGGACCA 57.160 36.364 0.00 0.00 37.20 4.02
234 235 5.918576 AGAAAACGATTCAATTTTTCGGACC 59.081 36.000 8.09 0.00 41.88 4.46
235 236 6.986424 AGAAAACGATTCAATTTTTCGGAC 57.014 33.333 8.09 0.00 41.88 4.79
236 237 7.867752 AGTAGAAAACGATTCAATTTTTCGGA 58.132 30.769 8.09 0.00 41.88 4.55
237 238 8.502161 AAGTAGAAAACGATTCAATTTTTCGG 57.498 30.769 8.09 0.00 41.88 4.30
241 242 9.855021 CCCATAAGTAGAAAACGATTCAATTTT 57.145 29.630 8.09 0.00 0.00 1.82
242 243 9.020731 ACCCATAAGTAGAAAACGATTCAATTT 57.979 29.630 8.09 2.85 0.00 1.82
243 244 8.458843 CACCCATAAGTAGAAAACGATTCAATT 58.541 33.333 8.09 3.33 0.00 2.32
244 245 7.067008 CCACCCATAAGTAGAAAACGATTCAAT 59.933 37.037 8.09 0.00 0.00 2.57
245 246 6.373216 CCACCCATAAGTAGAAAACGATTCAA 59.627 38.462 8.09 0.00 0.00 2.69
246 247 5.878116 CCACCCATAAGTAGAAAACGATTCA 59.122 40.000 8.09 0.00 0.00 2.57
247 248 5.220796 GCCACCCATAAGTAGAAAACGATTC 60.221 44.000 0.00 0.00 0.00 2.52
248 249 4.638865 GCCACCCATAAGTAGAAAACGATT 59.361 41.667 0.00 0.00 0.00 3.34
249 250 4.196971 GCCACCCATAAGTAGAAAACGAT 58.803 43.478 0.00 0.00 0.00 3.73
250 251 3.008157 TGCCACCCATAAGTAGAAAACGA 59.992 43.478 0.00 0.00 0.00 3.85
251 252 3.340034 TGCCACCCATAAGTAGAAAACG 58.660 45.455 0.00 0.00 0.00 3.60
252 253 5.394115 CCAATGCCACCCATAAGTAGAAAAC 60.394 44.000 0.00 0.00 32.67 2.43
253 254 4.709397 CCAATGCCACCCATAAGTAGAAAA 59.291 41.667 0.00 0.00 32.67 2.29
254 255 4.264172 ACCAATGCCACCCATAAGTAGAAA 60.264 41.667 0.00 0.00 32.67 2.52
255 256 3.268334 ACCAATGCCACCCATAAGTAGAA 59.732 43.478 0.00 0.00 32.67 2.10
256 257 2.849943 ACCAATGCCACCCATAAGTAGA 59.150 45.455 0.00 0.00 32.67 2.59
257 258 2.951642 CACCAATGCCACCCATAAGTAG 59.048 50.000 0.00 0.00 32.67 2.57
258 259 2.357673 CCACCAATGCCACCCATAAGTA 60.358 50.000 0.00 0.00 32.67 2.24
259 260 1.619432 CCACCAATGCCACCCATAAGT 60.619 52.381 0.00 0.00 32.67 2.24
260 261 1.113788 CCACCAATGCCACCCATAAG 58.886 55.000 0.00 0.00 32.67 1.73
261 262 0.325110 CCCACCAATGCCACCCATAA 60.325 55.000 0.00 0.00 32.67 1.90
262 263 1.309347 CCCACCAATGCCACCCATA 59.691 57.895 0.00 0.00 32.67 2.74
263 264 1.513975 TACCCACCAATGCCACCCAT 61.514 55.000 0.00 0.00 35.06 4.00
264 265 1.730295 TTACCCACCAATGCCACCCA 61.730 55.000 0.00 0.00 0.00 4.51
265 266 0.325203 ATTACCCACCAATGCCACCC 60.325 55.000 0.00 0.00 0.00 4.61
266 267 1.567357 AATTACCCACCAATGCCACC 58.433 50.000 0.00 0.00 0.00 4.61
267 268 3.694043 AAAATTACCCACCAATGCCAC 57.306 42.857 0.00 0.00 0.00 5.01
268 269 5.485353 TGATAAAAATTACCCACCAATGCCA 59.515 36.000 0.00 0.00 0.00 4.92
269 270 5.983540 TGATAAAAATTACCCACCAATGCC 58.016 37.500 0.00 0.00 0.00 4.40
270 271 7.102993 AGTTGATAAAAATTACCCACCAATGC 58.897 34.615 0.00 0.00 0.00 3.56
271 272 8.934825 CAAGTTGATAAAAATTACCCACCAATG 58.065 33.333 0.00 0.00 0.00 2.82
272 273 8.875168 TCAAGTTGATAAAAATTACCCACCAAT 58.125 29.630 0.08 0.00 0.00 3.16
273 274 8.251383 TCAAGTTGATAAAAATTACCCACCAA 57.749 30.769 0.08 0.00 0.00 3.67
274 275 7.841282 TCAAGTTGATAAAAATTACCCACCA 57.159 32.000 0.08 0.00 0.00 4.17
275 276 7.817478 CCTTCAAGTTGATAAAAATTACCCACC 59.183 37.037 6.36 0.00 0.00 4.61
276 277 7.817478 CCCTTCAAGTTGATAAAAATTACCCAC 59.183 37.037 6.36 0.00 0.00 4.61
277 278 7.511028 ACCCTTCAAGTTGATAAAAATTACCCA 59.489 33.333 6.36 0.00 0.00 4.51
278 279 7.903145 ACCCTTCAAGTTGATAAAAATTACCC 58.097 34.615 6.36 0.00 0.00 3.69
279 280 9.850628 GTACCCTTCAAGTTGATAAAAATTACC 57.149 33.333 6.36 0.00 0.00 2.85
289 290 8.793592 GTCATTAAAAGTACCCTTCAAGTTGAT 58.206 33.333 6.36 0.00 0.00 2.57
290 291 7.041644 CGTCATTAAAAGTACCCTTCAAGTTGA 60.042 37.037 0.08 0.08 0.00 3.18
291 292 7.075741 CGTCATTAAAAGTACCCTTCAAGTTG 58.924 38.462 0.00 0.00 0.00 3.16
292 293 6.206048 CCGTCATTAAAAGTACCCTTCAAGTT 59.794 38.462 0.00 0.00 0.00 2.66
293 294 5.704053 CCGTCATTAAAAGTACCCTTCAAGT 59.296 40.000 0.00 0.00 0.00 3.16
294 295 5.935789 TCCGTCATTAAAAGTACCCTTCAAG 59.064 40.000 0.00 0.00 0.00 3.02
295 296 5.702209 GTCCGTCATTAAAAGTACCCTTCAA 59.298 40.000 0.00 0.00 0.00 2.69
296 297 5.240121 GTCCGTCATTAAAAGTACCCTTCA 58.760 41.667 0.00 0.00 0.00 3.02
297 298 4.328169 CGTCCGTCATTAAAAGTACCCTTC 59.672 45.833 0.00 0.00 0.00 3.46
298 299 4.021192 TCGTCCGTCATTAAAAGTACCCTT 60.021 41.667 0.00 0.00 0.00 3.95
299 300 3.511146 TCGTCCGTCATTAAAAGTACCCT 59.489 43.478 0.00 0.00 0.00 4.34
300 301 3.614176 GTCGTCCGTCATTAAAAGTACCC 59.386 47.826 0.00 0.00 0.00 3.69
301 302 3.614176 GGTCGTCCGTCATTAAAAGTACC 59.386 47.826 0.00 0.00 0.00 3.34
302 303 4.236935 TGGTCGTCCGTCATTAAAAGTAC 58.763 43.478 0.00 0.00 36.30 2.73
303 304 4.218200 TCTGGTCGTCCGTCATTAAAAGTA 59.782 41.667 0.00 0.00 36.30 2.24
304 305 3.006110 TCTGGTCGTCCGTCATTAAAAGT 59.994 43.478 0.00 0.00 36.30 2.66
305 306 3.581755 TCTGGTCGTCCGTCATTAAAAG 58.418 45.455 0.00 0.00 36.30 2.27
306 307 3.663995 TCTGGTCGTCCGTCATTAAAA 57.336 42.857 0.00 0.00 36.30 1.52
307 308 3.581755 CTTCTGGTCGTCCGTCATTAAA 58.418 45.455 0.00 0.00 36.30 1.52
308 309 2.673043 GCTTCTGGTCGTCCGTCATTAA 60.673 50.000 0.00 0.00 36.30 1.40
309 310 1.135199 GCTTCTGGTCGTCCGTCATTA 60.135 52.381 0.00 0.00 36.30 1.90
310 311 0.389948 GCTTCTGGTCGTCCGTCATT 60.390 55.000 0.00 0.00 36.30 2.57
311 312 1.215647 GCTTCTGGTCGTCCGTCAT 59.784 57.895 0.00 0.00 36.30 3.06
312 313 0.607217 TAGCTTCTGGTCGTCCGTCA 60.607 55.000 0.00 0.00 36.30 4.35
313 314 0.739561 ATAGCTTCTGGTCGTCCGTC 59.260 55.000 0.00 0.00 36.30 4.79
314 315 1.948145 CTATAGCTTCTGGTCGTCCGT 59.052 52.381 0.00 0.00 36.30 4.69
315 316 1.335142 GCTATAGCTTCTGGTCGTCCG 60.335 57.143 17.75 0.00 38.21 4.79
316 317 1.000052 GGCTATAGCTTCTGGTCGTCC 60.000 57.143 23.53 0.00 41.70 4.79
317 318 1.335142 CGGCTATAGCTTCTGGTCGTC 60.335 57.143 23.53 2.73 41.70 4.20
318 319 0.669077 CGGCTATAGCTTCTGGTCGT 59.331 55.000 23.53 0.00 41.70 4.34
319 320 0.664767 GCGGCTATAGCTTCTGGTCG 60.665 60.000 23.53 16.87 41.70 4.79
320 321 0.676736 AGCGGCTATAGCTTCTGGTC 59.323 55.000 23.53 4.86 43.24 4.02
321 322 2.827715 AGCGGCTATAGCTTCTGGT 58.172 52.632 23.53 13.61 43.24 4.00
328 329 6.693342 CGTGTATTAATAAAGCGGCTATAGC 58.307 40.000 16.78 16.78 41.14 2.97
329 330 6.309494 TGCGTGTATTAATAAAGCGGCTATAG 59.691 38.462 1.35 0.00 0.00 1.31
330 331 6.089820 GTGCGTGTATTAATAAAGCGGCTATA 59.910 38.462 1.35 0.00 0.00 1.31
331 332 4.992319 TGCGTGTATTAATAAAGCGGCTAT 59.008 37.500 1.35 0.00 0.00 2.97
332 333 4.209703 GTGCGTGTATTAATAAAGCGGCTA 59.790 41.667 1.35 0.00 0.00 3.93
333 334 3.001939 GTGCGTGTATTAATAAAGCGGCT 59.998 43.478 0.00 0.00 0.00 5.52
334 335 3.285745 GTGCGTGTATTAATAAAGCGGC 58.714 45.455 13.03 0.00 0.00 6.53
335 336 3.602946 CGGTGCGTGTATTAATAAAGCGG 60.603 47.826 13.03 4.32 0.00 5.52
336 337 3.243410 TCGGTGCGTGTATTAATAAAGCG 59.757 43.478 0.00 3.88 0.00 4.68
337 338 4.782252 TCGGTGCGTGTATTAATAAAGC 57.218 40.909 0.00 4.24 0.00 3.51
338 339 6.097156 TGTTCGGTGCGTGTATTAATAAAG 57.903 37.500 0.00 0.00 0.00 1.85
339 340 6.238157 GGATGTTCGGTGCGTGTATTAATAAA 60.238 38.462 0.00 0.00 0.00 1.40
340 341 5.234757 GGATGTTCGGTGCGTGTATTAATAA 59.765 40.000 0.00 0.00 0.00 1.40
341 342 4.746115 GGATGTTCGGTGCGTGTATTAATA 59.254 41.667 0.00 0.00 0.00 0.98
342 343 3.558418 GGATGTTCGGTGCGTGTATTAAT 59.442 43.478 0.00 0.00 0.00 1.40
343 344 2.931325 GGATGTTCGGTGCGTGTATTAA 59.069 45.455 0.00 0.00 0.00 1.40
344 345 2.542597 GGATGTTCGGTGCGTGTATTA 58.457 47.619 0.00 0.00 0.00 0.98
345 346 1.365699 GGATGTTCGGTGCGTGTATT 58.634 50.000 0.00 0.00 0.00 1.89
346 347 0.461339 GGGATGTTCGGTGCGTGTAT 60.461 55.000 0.00 0.00 0.00 2.29
347 348 1.079681 GGGATGTTCGGTGCGTGTA 60.080 57.895 0.00 0.00 0.00 2.90
348 349 2.358247 GGGATGTTCGGTGCGTGT 60.358 61.111 0.00 0.00 0.00 4.49
349 350 1.511318 TTTGGGATGTTCGGTGCGTG 61.511 55.000 0.00 0.00 0.00 5.34
350 351 0.820074 TTTTGGGATGTTCGGTGCGT 60.820 50.000 0.00 0.00 0.00 5.24
351 352 0.312416 TTTTTGGGATGTTCGGTGCG 59.688 50.000 0.00 0.00 0.00 5.34
352 353 2.741759 ATTTTTGGGATGTTCGGTGC 57.258 45.000 0.00 0.00 0.00 5.01
353 354 4.400884 TGGATATTTTTGGGATGTTCGGTG 59.599 41.667 0.00 0.00 0.00 4.94
354 355 4.605183 TGGATATTTTTGGGATGTTCGGT 58.395 39.130 0.00 0.00 0.00 4.69
355 356 4.887071 TCTGGATATTTTTGGGATGTTCGG 59.113 41.667 0.00 0.00 0.00 4.30
356 357 6.449635 TTCTGGATATTTTTGGGATGTTCG 57.550 37.500 0.00 0.00 0.00 3.95
393 394 9.936759 TGTTCCTTTCTGTTTCTATTTGTTTTT 57.063 25.926 0.00 0.00 0.00 1.94
394 395 9.936759 TTGTTCCTTTCTGTTTCTATTTGTTTT 57.063 25.926 0.00 0.00 0.00 2.43
395 396 9.936759 TTTGTTCCTTTCTGTTTCTATTTGTTT 57.063 25.926 0.00 0.00 0.00 2.83
396 397 9.586435 CTTTGTTCCTTTCTGTTTCTATTTGTT 57.414 29.630 0.00 0.00 0.00 2.83
397 398 8.197439 CCTTTGTTCCTTTCTGTTTCTATTTGT 58.803 33.333 0.00 0.00 0.00 2.83
398 399 8.413229 TCCTTTGTTCCTTTCTGTTTCTATTTG 58.587 33.333 0.00 0.00 0.00 2.32
399 400 8.533569 TCCTTTGTTCCTTTCTGTTTCTATTT 57.466 30.769 0.00 0.00 0.00 1.40
400 401 8.533569 TTCCTTTGTTCCTTTCTGTTTCTATT 57.466 30.769 0.00 0.00 0.00 1.73
401 402 7.998964 TCTTCCTTTGTTCCTTTCTGTTTCTAT 59.001 33.333 0.00 0.00 0.00 1.98
402 403 7.343357 TCTTCCTTTGTTCCTTTCTGTTTCTA 58.657 34.615 0.00 0.00 0.00 2.10
403 404 6.187682 TCTTCCTTTGTTCCTTTCTGTTTCT 58.812 36.000 0.00 0.00 0.00 2.52
404 405 6.318900 TCTCTTCCTTTGTTCCTTTCTGTTTC 59.681 38.462 0.00 0.00 0.00 2.78
414 415 3.055458 CCTCCTCTCTCTTCCTTTGTTCC 60.055 52.174 0.00 0.00 0.00 3.62
424 425 0.558712 ATACGGCCCTCCTCTCTCTT 59.441 55.000 0.00 0.00 0.00 2.85
438 439 2.608752 GCCCATTACCTGTACGATACGG 60.609 54.545 0.00 0.00 34.81 4.02
439 440 2.295349 AGCCCATTACCTGTACGATACG 59.705 50.000 0.00 0.00 0.00 3.06
441 442 3.962063 TCAAGCCCATTACCTGTACGATA 59.038 43.478 0.00 0.00 0.00 2.92
442 443 2.769663 TCAAGCCCATTACCTGTACGAT 59.230 45.455 0.00 0.00 0.00 3.73
444 445 2.167693 TCTCAAGCCCATTACCTGTACG 59.832 50.000 0.00 0.00 0.00 3.67
446 447 4.288626 ACTTTCTCAAGCCCATTACCTGTA 59.711 41.667 0.00 0.00 32.57 2.74
462 463 5.760253 TGAGTGTCAATTCCTCAACTTTCTC 59.240 40.000 0.00 0.00 32.55 2.87
465 466 6.773976 TTTGAGTGTCAATTCCTCAACTTT 57.226 33.333 3.72 0.00 42.99 2.66
466 467 6.966534 ATTTGAGTGTCAATTCCTCAACTT 57.033 33.333 3.72 0.00 42.99 2.66
467 468 6.966534 AATTTGAGTGTCAATTCCTCAACT 57.033 33.333 3.72 0.00 42.99 3.16
472 473 6.713762 TCACAAATTTGAGTGTCAATTCCT 57.286 33.333 24.64 0.00 36.11 3.36
479 480 5.177511 TCGACTGATCACAAATTTGAGTGTC 59.822 40.000 24.64 18.68 37.07 3.67
483 484 7.096477 GGTTTTTCGACTGATCACAAATTTGAG 60.096 37.037 24.64 16.73 0.00 3.02
484 485 6.695278 GGTTTTTCGACTGATCACAAATTTGA 59.305 34.615 24.64 3.52 0.00 2.69
485 486 6.074356 GGGTTTTTCGACTGATCACAAATTTG 60.074 38.462 16.67 16.67 0.00 2.32
508 509 1.543429 GGTGAGTTGTCTTGACCTGGG 60.543 57.143 0.00 0.00 0.00 4.45
509 510 1.140852 TGGTGAGTTGTCTTGACCTGG 59.859 52.381 0.00 0.00 31.62 4.45
538 546 4.726416 TCGATTTCTGCTTTGAGATTTGC 58.274 39.130 0.00 0.00 0.00 3.68
570 578 6.478512 TTGATTTTGGGTCAGCTAGTTTTT 57.521 33.333 0.00 0.00 0.00 1.94
575 583 6.810182 CAGAAAATTGATTTTGGGTCAGCTAG 59.190 38.462 6.44 0.00 39.86 3.42
584 592 6.622833 AAACTGCCAGAAAATTGATTTTGG 57.377 33.333 0.00 4.95 39.86 3.28
593 601 5.658190 AGCCATATGTAAACTGCCAGAAAAT 59.342 36.000 0.00 0.00 0.00 1.82
599 607 6.605194 TCATTTTAGCCATATGTAAACTGCCA 59.395 34.615 1.24 0.00 0.00 4.92
605 613 9.672086 GCGTAAATCATTTTAGCCATATGTAAA 57.328 29.630 1.24 0.00 0.00 2.01
607 615 7.663905 AGGCGTAAATCATTTTAGCCATATGTA 59.336 33.333 22.76 0.00 40.41 2.29
614 622 5.744666 TGTAGGCGTAAATCATTTTAGCC 57.255 39.130 16.56 16.56 39.42 3.93
667 676 5.523369 AGTTTGATTAGCTTCACTGTTTGC 58.477 37.500 0.00 0.00 0.00 3.68
694 703 3.058501 ACGCCCGTCAATTTTGAACTAAG 60.059 43.478 0.00 0.00 39.21 2.18
698 709 2.048498 GAACGCCCGTCAATTTTGAAC 58.952 47.619 0.00 0.00 39.21 3.18
706 717 2.355363 CGTCTGAACGCCCGTCAA 60.355 61.111 0.00 0.00 42.82 3.18
787 798 4.516195 GAGGGCTTCGAGGGTCGC 62.516 72.222 0.00 0.00 40.21 5.19
813 824 4.379243 AGCGCGTGGAGAGGGTTG 62.379 66.667 8.43 0.00 0.00 3.77
819 830 3.749064 GGTGAGAGCGCGTGGAGA 61.749 66.667 8.43 0.00 0.00 3.71
972 983 2.182030 CTCGGTCGTCTCTTGGCC 59.818 66.667 0.00 0.00 0.00 5.36
1181 1192 1.215014 GAAACCGGCAAAAGCTGTGC 61.215 55.000 13.08 13.08 41.45 4.57
1183 1194 0.385390 CTGAAACCGGCAAAAGCTGT 59.615 50.000 0.00 0.00 0.00 4.40
1190 1201 1.698506 ATGGAAACTGAAACCGGCAA 58.301 45.000 0.00 0.00 0.00 4.52
1192 1203 3.181490 GGAATATGGAAACTGAAACCGGC 60.181 47.826 0.00 0.00 0.00 6.13
1193 1204 4.270008 AGGAATATGGAAACTGAAACCGG 58.730 43.478 0.00 0.00 0.00 5.28
1197 1208 7.669722 AGCTACAAAGGAATATGGAAACTGAAA 59.330 33.333 0.00 0.00 0.00 2.69
1253 1303 2.004733 CACTTCGATCTGCAGCAATCA 58.995 47.619 9.47 0.00 0.00 2.57
1254 1304 1.329906 CCACTTCGATCTGCAGCAATC 59.670 52.381 9.47 7.10 0.00 2.67
1255 1305 1.339438 ACCACTTCGATCTGCAGCAAT 60.339 47.619 9.47 0.00 0.00 3.56
1256 1306 0.035317 ACCACTTCGATCTGCAGCAA 59.965 50.000 9.47 0.00 0.00 3.91
1257 1307 0.035317 AACCACTTCGATCTGCAGCA 59.965 50.000 9.47 0.00 0.00 4.41
1258 1308 0.445436 CAACCACTTCGATCTGCAGC 59.555 55.000 9.47 0.00 0.00 5.25
1259 1309 1.800805 ACAACCACTTCGATCTGCAG 58.199 50.000 7.63 7.63 0.00 4.41
1260 1310 3.195610 AGATACAACCACTTCGATCTGCA 59.804 43.478 0.00 0.00 0.00 4.41
1261 1311 3.786635 AGATACAACCACTTCGATCTGC 58.213 45.455 0.00 0.00 0.00 4.26
1262 1312 5.171476 ACAAGATACAACCACTTCGATCTG 58.829 41.667 0.00 0.00 0.00 2.90
1263 1313 5.407407 ACAAGATACAACCACTTCGATCT 57.593 39.130 0.00 0.00 0.00 2.75
1264 1314 7.707035 AGAATACAAGATACAACCACTTCGATC 59.293 37.037 0.00 0.00 0.00 3.69
1265 1315 7.492669 CAGAATACAAGATACAACCACTTCGAT 59.507 37.037 0.00 0.00 0.00 3.59
1266 1316 6.811665 CAGAATACAAGATACAACCACTTCGA 59.188 38.462 0.00 0.00 0.00 3.71
1267 1317 6.590292 ACAGAATACAAGATACAACCACTTCG 59.410 38.462 0.00 0.00 0.00 3.79
1268 1318 7.907214 ACAGAATACAAGATACAACCACTTC 57.093 36.000 0.00 0.00 0.00 3.01
1328 1503 2.354510 CCACGCTTCAAGACAGACAAAA 59.645 45.455 0.00 0.00 0.00 2.44
1453 1644 3.010138 TGATTCTCCTTTGGTGGTTAGGG 59.990 47.826 0.00 0.00 0.00 3.53
1461 1652 2.025887 AGGCGAATGATTCTCCTTTGGT 60.026 45.455 10.78 0.00 41.98 3.67
1466 1657 4.823989 CCATTTTAGGCGAATGATTCTCCT 59.176 41.667 19.43 19.43 46.15 3.69
1479 1671 8.051901 AGTACATTAAGTCAACCATTTTAGGC 57.948 34.615 0.00 0.00 0.00 3.93
1514 1706 8.190122 TGTCTCTTGTACAAAAAGTAGTACGAA 58.810 33.333 10.03 0.00 42.62 3.85
1515 1707 7.706159 TGTCTCTTGTACAAAAAGTAGTACGA 58.294 34.615 10.03 0.00 42.62 3.43
1516 1708 7.646922 ACTGTCTCTTGTACAAAAAGTAGTACG 59.353 37.037 10.03 0.00 42.62 3.67
1517 1709 8.868635 ACTGTCTCTTGTACAAAAAGTAGTAC 57.131 34.615 10.03 5.33 40.68 2.73
1527 1719 6.710597 AACACTAGACTGTCTCTTGTACAA 57.289 37.500 14.62 8.28 33.68 2.41
1566 1767 4.357142 CGGATTTCATTTCCTGATGCTTG 58.643 43.478 0.00 0.00 32.72 4.01
1603 1804 1.268896 GCACTTCATCGGCATTCCATG 60.269 52.381 0.00 0.00 0.00 3.66
1610 1838 2.434185 GACGGCACTTCATCGGCA 60.434 61.111 0.00 0.00 31.36 5.69
1618 1846 1.553248 TGCTATTGTAGGACGGCACTT 59.447 47.619 0.00 0.00 0.00 3.16
1679 1907 5.260027 ACGCTCAAAATGTACTTACGTTC 57.740 39.130 0.00 0.00 34.53 3.95
1683 1911 7.578169 AGTTCTACGCTCAAAATGTACTTAC 57.422 36.000 0.00 0.00 0.00 2.34
1686 1914 6.979238 GGATAGTTCTACGCTCAAAATGTACT 59.021 38.462 0.00 0.00 0.00 2.73
1687 1915 6.074994 CGGATAGTTCTACGCTCAAAATGTAC 60.075 42.308 0.00 0.00 0.00 2.90
1690 1918 4.804139 ACGGATAGTTCTACGCTCAAAATG 59.196 41.667 0.00 0.00 0.00 2.32
1691 1919 5.007385 ACGGATAGTTCTACGCTCAAAAT 57.993 39.130 0.00 0.00 0.00 1.82
1692 1920 4.445452 ACGGATAGTTCTACGCTCAAAA 57.555 40.909 0.00 0.00 0.00 2.44
1711 1941 2.032620 AGGCAGGGATAGTACAGAACG 58.967 52.381 0.00 0.00 0.00 3.95
1741 1971 0.392706 TTGTCTCGTGTCATGGCAGT 59.607 50.000 0.00 0.00 0.00 4.40
1753 1983 2.506865 CAGCTACGTAGTGTTGTCTCG 58.493 52.381 22.98 3.43 45.73 4.04
1754 1984 2.095161 AGCAGCTACGTAGTGTTGTCTC 60.095 50.000 22.98 4.61 45.73 3.36
1755 1985 1.887198 AGCAGCTACGTAGTGTTGTCT 59.113 47.619 22.98 15.58 45.73 3.41
1783 2013 1.825090 ATTTCCAACAGCGCATCTGA 58.175 45.000 11.47 0.00 45.72 3.27
1788 2018 1.216122 GCAAAATTTCCAACAGCGCA 58.784 45.000 11.47 0.00 0.00 6.09
1814 2045 1.009675 CGTCTGCTTGGTGTTGTGC 60.010 57.895 0.00 0.00 0.00 4.57
1817 2048 0.813610 TGTCCGTCTGCTTGGTGTTG 60.814 55.000 0.00 0.00 0.00 3.33
1843 2074 2.124612 CAGATGATGGTGGCGGCA 60.125 61.111 7.97 7.97 0.00 5.69
1845 2076 0.107508 ACTTCAGATGATGGTGGCGG 60.108 55.000 1.41 0.00 0.00 6.13
1846 2077 1.293924 GACTTCAGATGATGGTGGCG 58.706 55.000 1.41 0.00 0.00 5.69
1847 2078 1.293924 CGACTTCAGATGATGGTGGC 58.706 55.000 1.41 0.00 0.00 5.01
1848 2079 2.094026 TCACGACTTCAGATGATGGTGG 60.094 50.000 0.00 0.54 0.00 4.61
1849 2080 3.236632 TCACGACTTCAGATGATGGTG 57.763 47.619 0.00 0.00 0.00 4.17
1856 2087 5.970592 TGAAGATCATTCACGACTTCAGAT 58.029 37.500 0.00 0.00 40.86 2.90
1863 2094 5.635280 TGAAGTTCTGAAGATCATTCACGAC 59.365 40.000 4.17 2.62 0.00 4.34
1869 2100 6.589523 CGAGTTCTGAAGTTCTGAAGATCATT 59.410 38.462 21.45 7.14 35.48 2.57
1871 2102 5.010112 ACGAGTTCTGAAGTTCTGAAGATCA 59.990 40.000 21.45 1.93 35.48 2.92
1872 2103 5.344665 CACGAGTTCTGAAGTTCTGAAGATC 59.655 44.000 21.45 19.69 35.48 2.75
1874 2105 4.338400 TCACGAGTTCTGAAGTTCTGAAGA 59.662 41.667 21.45 13.70 35.48 2.87
1875 2106 4.611943 TCACGAGTTCTGAAGTTCTGAAG 58.388 43.478 21.45 14.20 35.48 3.02
1877 2108 4.649088 TTCACGAGTTCTGAAGTTCTGA 57.351 40.909 8.27 8.27 0.00 3.27
1878 2109 4.984785 TCATTCACGAGTTCTGAAGTTCTG 59.015 41.667 4.17 3.79 31.22 3.02
1879 2110 5.201713 TCATTCACGAGTTCTGAAGTTCT 57.798 39.130 4.17 0.00 31.22 3.01
1880 2111 5.866633 AGATCATTCACGAGTTCTGAAGTTC 59.133 40.000 0.00 0.00 31.22 3.01
1881 2112 5.788450 AGATCATTCACGAGTTCTGAAGTT 58.212 37.500 0.00 0.00 31.22 2.66
1882 2113 5.398603 AGATCATTCACGAGTTCTGAAGT 57.601 39.130 0.00 0.00 31.22 3.01
2023 2254 2.044650 ATGCTGCTCCCGTGCATT 60.045 55.556 0.00 0.00 43.85 3.56
2103 2334 4.873129 CGGTCATCGTGGCCCTCG 62.873 72.222 0.00 5.57 39.48 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.