Multiple sequence alignment - TraesCS2A01G336200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G336200 chr2A 100.000 2753 0 0 1 2753 570012765 570015517 0.000000e+00 5084.0
1 TraesCS2A01G336200 chr2A 96.579 380 11 2 11 389 733108964 733109342 1.800000e-176 628.0
2 TraesCS2A01G336200 chr2D 95.787 1780 46 10 390 2160 420166507 420164748 0.000000e+00 2844.0
3 TraesCS2A01G336200 chr2D 87.640 356 16 10 2167 2520 420164702 420164373 3.320000e-104 388.0
4 TraesCS2A01G336200 chr2D 91.781 219 18 0 2535 2753 176635841 176635623 3.440000e-79 305.0
5 TraesCS2A01G336200 chr2B 96.851 1429 39 5 734 2158 492616180 492614754 0.000000e+00 2385.0
6 TraesCS2A01G336200 chr2B 94.355 372 16 3 2167 2536 492614707 492614339 1.430000e-157 566.0
7 TraesCS2A01G336200 chr2B 93.818 275 7 2 390 654 492616454 492616180 3.300000e-109 405.0
8 TraesCS2A01G336200 chr2B 92.941 85 6 0 653 737 14834409 14834325 1.040000e-24 124.0
9 TraesCS2A01G336200 chr2B 89.000 100 8 2 638 737 677805515 677805611 1.340000e-23 121.0
10 TraesCS2A01G336200 chr5A 98.904 365 3 1 25 389 460411286 460410923 0.000000e+00 651.0
11 TraesCS2A01G336200 chr5A 96.978 364 10 1 27 389 597672268 597671905 6.520000e-171 610.0
12 TraesCS2A01G336200 chr5A 92.237 219 17 0 2535 2753 618247141 618246923 7.400000e-81 311.0
13 TraesCS2A01G336200 chr5A 91.860 86 7 0 653 738 134086058 134085973 1.340000e-23 121.0
14 TraesCS2A01G336200 chr6A 98.098 368 7 0 22 389 601004230 601004597 2.310000e-180 641.0
15 TraesCS2A01G336200 chr6A 91.011 89 7 1 653 741 464514513 464514426 4.820000e-23 119.0
16 TraesCS2A01G336200 chr3A 97.354 378 8 2 13 389 533960743 533961119 2.310000e-180 641.0
17 TraesCS2A01G336200 chr3A 96.712 365 12 0 25 389 19527678 19528042 2.340000e-170 608.0
18 TraesCS2A01G336200 chr7A 98.087 366 7 0 24 389 438213190 438212825 2.990000e-179 638.0
19 TraesCS2A01G336200 chr7A 96.730 367 11 1 24 389 66467731 66467365 6.520000e-171 610.0
20 TraesCS2A01G336200 chr4A 98.082 365 6 1 25 389 146664158 146663795 3.870000e-178 634.0
21 TraesCS2A01G336200 chr5D 91.781 219 18 0 2535 2753 39015541 39015759 3.440000e-79 305.0
22 TraesCS2A01G336200 chr5D 91.781 219 17 1 2535 2753 265671377 265671160 1.240000e-78 303.0
23 TraesCS2A01G336200 chr5D 91.743 218 18 0 2536 2753 342525685 342525902 1.240000e-78 303.0
24 TraesCS2A01G336200 chr5D 95.238 42 2 0 1987 2028 332215063 332215022 1.770000e-07 67.6
25 TraesCS2A01G336200 chr6D 91.743 218 18 0 2536 2753 97586889 97586672 1.240000e-78 303.0
26 TraesCS2A01G336200 chr6D 90.043 231 23 0 2523 2753 159027827 159027597 1.600000e-77 300.0
27 TraesCS2A01G336200 chr6D 91.011 89 7 1 653 741 325727795 325727708 4.820000e-23 119.0
28 TraesCS2A01G336200 chr5B 91.743 218 18 0 2536 2753 429739762 429739545 1.240000e-78 303.0
29 TraesCS2A01G336200 chr5B 91.860 86 7 0 653 738 134917768 134917853 1.340000e-23 121.0
30 TraesCS2A01G336200 chr4D 91.743 218 18 0 2536 2753 170665333 170665550 1.240000e-78 303.0
31 TraesCS2A01G336200 chr7D 93.023 86 5 1 653 738 41146563 41146647 1.040000e-24 124.0
32 TraesCS2A01G336200 chr1A 92.941 85 6 0 653 737 33225517 33225433 1.040000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G336200 chr2A 570012765 570015517 2752 False 5084.000000 5084 100.0000 1 2753 1 chr2A.!!$F1 2752
1 TraesCS2A01G336200 chr2D 420164373 420166507 2134 True 1616.000000 2844 91.7135 390 2520 2 chr2D.!!$R2 2130
2 TraesCS2A01G336200 chr2B 492614339 492616454 2115 True 1118.666667 2385 95.0080 390 2536 3 chr2B.!!$R2 2146

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.03582 ATGATACCCCGCACGTTGTT 60.036 50.0 0.0 0.0 0.0 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1934 1947 0.040067 GCCAAAAGGCAGTCTTCACG 60.04 55.0 0.84 0.0 33.94 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.570442 GGTTCGGTTTGTGCTTTTGA 57.430 45.000 0.00 0.00 0.00 2.69
20 21 2.459934 GGTTCGGTTTGTGCTTTTGAG 58.540 47.619 0.00 0.00 0.00 3.02
21 22 2.159296 GGTTCGGTTTGTGCTTTTGAGT 60.159 45.455 0.00 0.00 0.00 3.41
22 23 3.065648 GGTTCGGTTTGTGCTTTTGAGTA 59.934 43.478 0.00 0.00 0.00 2.59
23 24 4.439016 GGTTCGGTTTGTGCTTTTGAGTAA 60.439 41.667 0.00 0.00 0.00 2.24
24 25 4.966965 TCGGTTTGTGCTTTTGAGTAAA 57.033 36.364 0.00 0.00 0.00 2.01
25 26 4.664188 TCGGTTTGTGCTTTTGAGTAAAC 58.336 39.130 0.00 0.00 0.00 2.01
26 27 4.396790 TCGGTTTGTGCTTTTGAGTAAACT 59.603 37.500 0.00 0.00 0.00 2.66
27 28 5.585445 TCGGTTTGTGCTTTTGAGTAAACTA 59.415 36.000 0.00 0.00 0.00 2.24
28 29 5.907391 CGGTTTGTGCTTTTGAGTAAACTAG 59.093 40.000 0.00 0.00 0.00 2.57
29 30 6.238266 CGGTTTGTGCTTTTGAGTAAACTAGA 60.238 38.462 0.00 0.00 0.00 2.43
30 31 7.519970 CGGTTTGTGCTTTTGAGTAAACTAGAT 60.520 37.037 0.00 0.00 0.00 1.98
31 32 7.591426 GGTTTGTGCTTTTGAGTAAACTAGATG 59.409 37.037 0.00 0.00 0.00 2.90
32 33 8.342634 GTTTGTGCTTTTGAGTAAACTAGATGA 58.657 33.333 0.00 0.00 0.00 2.92
33 34 8.621532 TTGTGCTTTTGAGTAAACTAGATGAT 57.378 30.769 0.00 0.00 0.00 2.45
34 35 9.719355 TTGTGCTTTTGAGTAAACTAGATGATA 57.281 29.630 0.00 0.00 0.00 2.15
35 36 9.151471 TGTGCTTTTGAGTAAACTAGATGATAC 57.849 33.333 0.00 0.00 0.00 2.24
36 37 8.604890 GTGCTTTTGAGTAAACTAGATGATACC 58.395 37.037 0.00 0.00 0.00 2.73
37 38 7.769044 TGCTTTTGAGTAAACTAGATGATACCC 59.231 37.037 0.00 0.00 0.00 3.69
38 39 7.226918 GCTTTTGAGTAAACTAGATGATACCCC 59.773 40.741 0.00 0.00 0.00 4.95
39 40 6.401047 TTGAGTAAACTAGATGATACCCCG 57.599 41.667 0.00 0.00 0.00 5.73
40 41 4.280174 TGAGTAAACTAGATGATACCCCGC 59.720 45.833 0.00 0.00 0.00 6.13
41 42 4.220724 AGTAAACTAGATGATACCCCGCA 58.779 43.478 0.00 0.00 0.00 5.69
42 43 3.470645 AAACTAGATGATACCCCGCAC 57.529 47.619 0.00 0.00 0.00 5.34
43 44 0.959553 ACTAGATGATACCCCGCACG 59.040 55.000 0.00 0.00 0.00 5.34
44 45 0.959553 CTAGATGATACCCCGCACGT 59.040 55.000 0.00 0.00 0.00 4.49
45 46 1.340248 CTAGATGATACCCCGCACGTT 59.660 52.381 0.00 0.00 0.00 3.99
46 47 0.179084 AGATGATACCCCGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10
47 48 0.461339 GATGATACCCCGCACGTTGT 60.461 55.000 0.00 0.00 0.00 3.32
48 49 0.035820 ATGATACCCCGCACGTTGTT 60.036 50.000 0.00 0.00 0.00 2.83
49 50 0.951525 TGATACCCCGCACGTTGTTG 60.952 55.000 0.00 0.00 0.00 3.33
50 51 2.248274 GATACCCCGCACGTTGTTGC 62.248 60.000 0.00 0.00 39.28 4.17
56 57 2.642700 GCACGTTGTTGCGGGAAT 59.357 55.556 0.00 0.00 37.48 3.01
57 58 1.870383 GCACGTTGTTGCGGGAATA 59.130 52.632 0.00 0.00 37.48 1.75
58 59 0.450184 GCACGTTGTTGCGGGAATAT 59.550 50.000 0.00 0.00 37.48 1.28
59 60 1.135517 GCACGTTGTTGCGGGAATATT 60.136 47.619 0.00 0.00 37.48 1.28
60 61 2.096174 GCACGTTGTTGCGGGAATATTA 59.904 45.455 0.00 0.00 37.48 0.98
61 62 3.242936 GCACGTTGTTGCGGGAATATTAT 60.243 43.478 0.00 0.00 37.48 1.28
62 63 4.278858 CACGTTGTTGCGGGAATATTATG 58.721 43.478 0.00 0.00 37.48 1.90
63 64 3.242936 ACGTTGTTGCGGGAATATTATGC 60.243 43.478 0.00 0.00 35.98 3.14
64 65 3.242903 CGTTGTTGCGGGAATATTATGCA 60.243 43.478 5.01 5.01 0.00 3.96
65 66 4.677584 GTTGTTGCGGGAATATTATGCAA 58.322 39.130 14.15 14.15 42.68 4.08
68 69 3.980646 TGCGGGAATATTATGCAACAC 57.019 42.857 6.33 0.00 31.69 3.32
69 70 3.282885 TGCGGGAATATTATGCAACACA 58.717 40.909 6.33 0.00 31.69 3.72
70 71 3.888323 TGCGGGAATATTATGCAACACAT 59.112 39.130 6.33 0.00 43.18 3.21
71 72 4.340666 TGCGGGAATATTATGCAACACATT 59.659 37.500 6.33 0.00 40.38 2.71
72 73 5.163468 TGCGGGAATATTATGCAACACATTT 60.163 36.000 6.33 0.00 40.38 2.32
73 74 5.402270 GCGGGAATATTATGCAACACATTTC 59.598 40.000 0.00 0.00 40.38 2.17
74 75 6.502652 CGGGAATATTATGCAACACATTTCA 58.497 36.000 0.00 0.00 40.38 2.69
75 76 6.638063 CGGGAATATTATGCAACACATTTCAG 59.362 38.462 0.00 0.00 40.38 3.02
76 77 7.491682 GGGAATATTATGCAACACATTTCAGT 58.508 34.615 0.00 0.00 40.38 3.41
77 78 7.436080 GGGAATATTATGCAACACATTTCAGTG 59.564 37.037 0.00 0.00 44.93 3.66
92 93 8.339344 ACATTTCAGTGTGATTCATTGTATGA 57.661 30.769 0.00 0.00 35.65 2.15
219 220 8.511604 AATAGAATGAAAATTCTCATGTCCGT 57.488 30.769 4.30 0.00 40.91 4.69
220 221 6.824305 AGAATGAAAATTCTCATGTCCGTT 57.176 33.333 0.00 0.00 36.20 4.44
221 222 7.219484 AGAATGAAAATTCTCATGTCCGTTT 57.781 32.000 0.00 0.00 36.20 3.60
222 223 7.086376 AGAATGAAAATTCTCATGTCCGTTTG 58.914 34.615 0.00 0.00 36.20 2.93
223 224 4.545610 TGAAAATTCTCATGTCCGTTTGC 58.454 39.130 0.00 0.00 0.00 3.68
224 225 4.037327 TGAAAATTCTCATGTCCGTTTGCA 59.963 37.500 0.00 0.00 0.00 4.08
225 226 4.789012 AAATTCTCATGTCCGTTTGCAT 57.211 36.364 0.00 0.00 0.00 3.96
226 227 3.770263 ATTCTCATGTCCGTTTGCATG 57.230 42.857 0.00 0.00 42.62 4.06
227 228 2.183478 TCTCATGTCCGTTTGCATGT 57.817 45.000 0.00 0.00 42.09 3.21
228 229 2.503331 TCTCATGTCCGTTTGCATGTT 58.497 42.857 0.00 0.00 42.09 2.71
229 230 2.226200 TCTCATGTCCGTTTGCATGTTG 59.774 45.455 0.00 0.00 42.09 3.33
230 231 2.225467 TCATGTCCGTTTGCATGTTGA 58.775 42.857 0.00 0.00 42.09 3.18
231 232 2.226200 TCATGTCCGTTTGCATGTTGAG 59.774 45.455 0.00 0.00 42.09 3.02
232 233 1.960417 TGTCCGTTTGCATGTTGAGA 58.040 45.000 0.00 0.00 0.00 3.27
233 234 2.503331 TGTCCGTTTGCATGTTGAGAT 58.497 42.857 0.00 0.00 0.00 2.75
234 235 2.226200 TGTCCGTTTGCATGTTGAGATG 59.774 45.455 0.00 0.00 0.00 2.90
235 236 2.226437 GTCCGTTTGCATGTTGAGATGT 59.774 45.455 0.00 0.00 0.00 3.06
236 237 2.226200 TCCGTTTGCATGTTGAGATGTG 59.774 45.455 0.00 0.00 0.00 3.21
237 238 2.030893 CCGTTTGCATGTTGAGATGTGT 60.031 45.455 0.00 0.00 0.00 3.72
238 239 3.228749 CGTTTGCATGTTGAGATGTGTC 58.771 45.455 0.00 0.00 0.00 3.67
239 240 3.058708 CGTTTGCATGTTGAGATGTGTCT 60.059 43.478 0.00 0.00 37.42 3.41
240 241 4.555313 CGTTTGCATGTTGAGATGTGTCTT 60.555 41.667 0.00 0.00 33.97 3.01
241 242 5.284079 GTTTGCATGTTGAGATGTGTCTTT 58.716 37.500 0.00 0.00 33.97 2.52
242 243 5.518848 TTGCATGTTGAGATGTGTCTTTT 57.481 34.783 0.00 0.00 33.97 2.27
243 244 5.518848 TGCATGTTGAGATGTGTCTTTTT 57.481 34.783 0.00 0.00 33.97 1.94
265 266 7.974243 TTTTCATGCATATTTCACGATCAAG 57.026 32.000 0.00 0.00 0.00 3.02
266 267 6.682423 TTCATGCATATTTCACGATCAAGT 57.318 33.333 0.00 0.00 0.00 3.16
267 268 6.051646 TCATGCATATTTCACGATCAAGTG 57.948 37.500 0.00 0.00 43.11 3.16
268 269 4.880886 TGCATATTTCACGATCAAGTGG 57.119 40.909 0.00 0.00 42.10 4.00
269 270 3.065233 TGCATATTTCACGATCAAGTGGC 59.935 43.478 0.00 0.00 42.10 5.01
270 271 3.065233 GCATATTTCACGATCAAGTGGCA 59.935 43.478 0.00 0.00 42.10 4.92
271 272 4.261322 GCATATTTCACGATCAAGTGGCAT 60.261 41.667 0.00 0.00 42.10 4.40
272 273 3.770263 ATTTCACGATCAAGTGGCATG 57.230 42.857 0.00 0.00 42.10 4.06
273 274 0.804364 TTCACGATCAAGTGGCATGC 59.196 50.000 9.90 9.90 42.10 4.06
274 275 0.036105 TCACGATCAAGTGGCATGCT 60.036 50.000 18.92 0.00 42.10 3.79
275 276 0.806868 CACGATCAAGTGGCATGCTT 59.193 50.000 18.92 0.45 38.40 3.91
276 277 0.806868 ACGATCAAGTGGCATGCTTG 59.193 50.000 18.92 14.39 43.26 4.01
293 294 7.997107 CATGCTTGCATGTTAAAAGACATAT 57.003 32.000 23.00 0.00 38.15 1.78
294 295 7.837505 CATGCTTGCATGTTAAAAGACATATG 58.162 34.615 23.00 0.00 38.15 1.78
295 296 6.331845 TGCTTGCATGTTAAAAGACATATGG 58.668 36.000 7.80 0.00 38.15 2.74
296 297 6.071447 TGCTTGCATGTTAAAAGACATATGGT 60.071 34.615 7.80 0.00 38.15 3.55
297 298 7.121907 TGCTTGCATGTTAAAAGACATATGGTA 59.878 33.333 7.80 0.00 38.15 3.25
298 299 7.645340 GCTTGCATGTTAAAAGACATATGGTAG 59.355 37.037 7.80 0.00 38.15 3.18
299 300 8.574251 TTGCATGTTAAAAGACATATGGTAGT 57.426 30.769 7.80 0.00 38.15 2.73
300 301 7.984391 TGCATGTTAAAAGACATATGGTAGTG 58.016 34.615 7.80 0.00 38.15 2.74
301 302 7.066887 TGCATGTTAAAAGACATATGGTAGTGG 59.933 37.037 7.80 0.00 38.15 4.00
302 303 7.468631 GCATGTTAAAAGACATATGGTAGTGGG 60.469 40.741 7.80 0.00 38.15 4.61
303 304 6.419791 TGTTAAAAGACATATGGTAGTGGGG 58.580 40.000 7.80 0.00 0.00 4.96
304 305 4.519906 AAAAGACATATGGTAGTGGGGG 57.480 45.455 7.80 0.00 0.00 5.40
305 306 2.889522 AGACATATGGTAGTGGGGGT 57.110 50.000 7.80 0.00 0.00 4.95
306 307 2.408565 AGACATATGGTAGTGGGGGTG 58.591 52.381 7.80 0.00 0.00 4.61
307 308 1.420138 GACATATGGTAGTGGGGGTGG 59.580 57.143 7.80 0.00 0.00 4.61
308 309 1.010294 ACATATGGTAGTGGGGGTGGA 59.990 52.381 7.80 0.00 0.00 4.02
309 310 1.420138 CATATGGTAGTGGGGGTGGAC 59.580 57.143 0.00 0.00 0.00 4.02
310 311 0.326808 TATGGTAGTGGGGGTGGACC 60.327 60.000 0.00 0.00 39.11 4.46
311 312 2.124312 GGTAGTGGGGGTGGACCT 59.876 66.667 0.00 0.00 40.03 3.85
312 313 1.540617 GGTAGTGGGGGTGGACCTT 60.541 63.158 0.00 0.00 40.03 3.50
313 314 1.138228 GGTAGTGGGGGTGGACCTTT 61.138 60.000 0.00 0.00 40.03 3.11
314 315 0.775542 GTAGTGGGGGTGGACCTTTT 59.224 55.000 0.00 0.00 40.03 2.27
315 316 1.069775 TAGTGGGGGTGGACCTTTTC 58.930 55.000 0.00 0.00 40.03 2.29
316 317 0.701310 AGTGGGGGTGGACCTTTTCT 60.701 55.000 0.00 0.00 40.03 2.52
317 318 0.251209 GTGGGGGTGGACCTTTTCTC 60.251 60.000 0.00 0.00 40.03 2.87
318 319 0.699577 TGGGGGTGGACCTTTTCTCA 60.700 55.000 0.00 0.00 40.03 3.27
319 320 0.704664 GGGGGTGGACCTTTTCTCAT 59.295 55.000 0.00 0.00 40.03 2.90
320 321 1.616994 GGGGGTGGACCTTTTCTCATG 60.617 57.143 0.00 0.00 40.03 3.07
321 322 1.177401 GGGTGGACCTTTTCTCATGC 58.823 55.000 0.00 0.00 35.85 4.06
322 323 1.547675 GGGTGGACCTTTTCTCATGCA 60.548 52.381 0.00 0.00 35.85 3.96
323 324 2.450476 GGTGGACCTTTTCTCATGCAT 58.550 47.619 0.00 0.00 0.00 3.96
324 325 2.165030 GGTGGACCTTTTCTCATGCATG 59.835 50.000 21.07 21.07 0.00 4.06
325 326 2.821969 GTGGACCTTTTCTCATGCATGT 59.178 45.455 25.43 4.14 0.00 3.21
326 327 3.256631 GTGGACCTTTTCTCATGCATGTT 59.743 43.478 25.43 2.15 0.00 2.71
327 328 3.256383 TGGACCTTTTCTCATGCATGTTG 59.744 43.478 25.43 18.71 0.00 3.33
328 329 3.256631 GGACCTTTTCTCATGCATGTTGT 59.743 43.478 25.43 12.83 0.00 3.32
329 330 4.232221 GACCTTTTCTCATGCATGTTGTG 58.768 43.478 25.43 14.20 0.00 3.33
330 331 3.638160 ACCTTTTCTCATGCATGTTGTGT 59.362 39.130 25.43 12.06 0.00 3.72
331 332 3.985279 CCTTTTCTCATGCATGTTGTGTG 59.015 43.478 25.43 12.95 0.00 3.82
332 333 4.261698 CCTTTTCTCATGCATGTTGTGTGA 60.262 41.667 25.43 12.31 0.00 3.58
333 334 5.456548 TTTTCTCATGCATGTTGTGTGAT 57.543 34.783 25.43 0.00 0.00 3.06
334 335 4.428615 TTCTCATGCATGTTGTGTGATG 57.571 40.909 25.43 0.00 0.00 3.07
335 336 3.677190 TCTCATGCATGTTGTGTGATGA 58.323 40.909 25.43 2.85 31.86 2.92
336 337 4.266714 TCTCATGCATGTTGTGTGATGAT 58.733 39.130 25.43 0.00 32.15 2.45
337 338 4.095782 TCTCATGCATGTTGTGTGATGATG 59.904 41.667 25.43 0.00 32.15 3.07
338 339 3.759618 TCATGCATGTTGTGTGATGATGT 59.240 39.130 25.43 0.00 29.35 3.06
339 340 3.562567 TGCATGTTGTGTGATGATGTG 57.437 42.857 0.00 0.00 0.00 3.21
340 341 2.229302 TGCATGTTGTGTGATGATGTGG 59.771 45.455 0.00 0.00 0.00 4.17
341 342 2.871133 CATGTTGTGTGATGATGTGGC 58.129 47.619 0.00 0.00 0.00 5.01
342 343 1.978454 TGTTGTGTGATGATGTGGCA 58.022 45.000 0.00 0.00 0.00 4.92
343 344 2.516906 TGTTGTGTGATGATGTGGCAT 58.483 42.857 0.00 0.00 0.00 4.40
344 345 2.229302 TGTTGTGTGATGATGTGGCATG 59.771 45.455 0.00 0.00 0.00 4.06
345 346 0.812549 TGTGTGATGATGTGGCATGC 59.187 50.000 9.90 9.90 0.00 4.06
346 347 1.100510 GTGTGATGATGTGGCATGCT 58.899 50.000 18.92 0.00 0.00 3.79
347 348 1.475280 GTGTGATGATGTGGCATGCTT 59.525 47.619 18.92 0.00 0.00 3.91
348 349 1.474879 TGTGATGATGTGGCATGCTTG 59.525 47.619 18.92 0.00 0.00 4.01
361 362 3.842732 CATGCTTGCATGTTGAGAGAA 57.157 42.857 23.00 0.00 0.00 2.87
362 363 4.168922 CATGCTTGCATGTTGAGAGAAA 57.831 40.909 23.00 0.00 0.00 2.52
363 364 4.744570 CATGCTTGCATGTTGAGAGAAAT 58.255 39.130 23.00 0.00 0.00 2.17
364 365 5.886992 CATGCTTGCATGTTGAGAGAAATA 58.113 37.500 23.00 0.00 0.00 1.40
365 366 5.556355 TGCTTGCATGTTGAGAGAAATAG 57.444 39.130 1.14 0.00 0.00 1.73
366 367 5.005740 TGCTTGCATGTTGAGAGAAATAGT 58.994 37.500 1.14 0.00 0.00 2.12
367 368 5.474532 TGCTTGCATGTTGAGAGAAATAGTT 59.525 36.000 1.14 0.00 0.00 2.24
368 369 6.654582 TGCTTGCATGTTGAGAGAAATAGTTA 59.345 34.615 1.14 0.00 0.00 2.24
369 370 7.148356 TGCTTGCATGTTGAGAGAAATAGTTAG 60.148 37.037 1.14 0.00 0.00 2.34
370 371 7.148340 GCTTGCATGTTGAGAGAAATAGTTAGT 60.148 37.037 1.14 0.00 0.00 2.24
371 372 7.601073 TGCATGTTGAGAGAAATAGTTAGTG 57.399 36.000 0.00 0.00 0.00 2.74
372 373 6.595326 TGCATGTTGAGAGAAATAGTTAGTGG 59.405 38.462 0.00 0.00 0.00 4.00
373 374 6.037610 GCATGTTGAGAGAAATAGTTAGTGGG 59.962 42.308 0.00 0.00 0.00 4.61
374 375 6.049955 TGTTGAGAGAAATAGTTAGTGGGG 57.950 41.667 0.00 0.00 0.00 4.96
375 376 5.045869 TGTTGAGAGAAATAGTTAGTGGGGG 60.046 44.000 0.00 0.00 0.00 5.40
376 377 3.454812 TGAGAGAAATAGTTAGTGGGGGC 59.545 47.826 0.00 0.00 0.00 5.80
377 378 3.712218 GAGAGAAATAGTTAGTGGGGGCT 59.288 47.826 0.00 0.00 0.00 5.19
378 379 4.892198 AGAGAAATAGTTAGTGGGGGCTA 58.108 43.478 0.00 0.00 0.00 3.93
379 380 4.902448 AGAGAAATAGTTAGTGGGGGCTAG 59.098 45.833 0.00 0.00 0.00 3.42
380 381 3.391626 AGAAATAGTTAGTGGGGGCTAGC 59.608 47.826 6.04 6.04 0.00 3.42
381 382 2.797285 ATAGTTAGTGGGGGCTAGCT 57.203 50.000 15.72 0.00 36.65 3.32
382 383 3.917324 ATAGTTAGTGGGGGCTAGCTA 57.083 47.619 15.72 0.00 38.49 3.32
383 384 2.797285 AGTTAGTGGGGGCTAGCTAT 57.203 50.000 15.72 0.00 32.08 2.97
384 385 3.061909 AGTTAGTGGGGGCTAGCTATT 57.938 47.619 15.72 0.00 32.08 1.73
385 386 3.394645 AGTTAGTGGGGGCTAGCTATTT 58.605 45.455 15.72 0.00 32.08 1.40
386 387 4.563782 AGTTAGTGGGGGCTAGCTATTTA 58.436 43.478 15.72 0.00 32.08 1.40
387 388 4.593634 AGTTAGTGGGGGCTAGCTATTTAG 59.406 45.833 15.72 0.00 32.08 1.85
388 389 3.346146 AGTGGGGGCTAGCTATTTAGA 57.654 47.619 15.72 0.00 0.00 2.10
395 396 4.319177 GGGCTAGCTATTTAGACACCATG 58.681 47.826 15.72 0.00 29.77 3.66
472 473 4.398044 GTGGTAATCGGTTGGATCATTTGT 59.602 41.667 0.00 0.00 33.02 2.83
658 669 6.390165 AGCTATTTTCTTTATGGACTACCCCT 59.610 38.462 0.00 0.00 34.81 4.79
726 737 6.183360 TGCAAAACGATCTTATATTGTGGGAC 60.183 38.462 0.00 0.00 0.00 4.46
730 741 4.022242 ACGATCTTATATTGTGGGACGGAG 60.022 45.833 0.00 0.00 0.00 4.63
756 767 6.148480 GGAGTATGTTCTAGCAATAGCCATTG 59.852 42.308 0.00 0.00 43.79 2.82
804 815 8.790718 GGTATACTCTTCTACGTTTATCATCCA 58.209 37.037 2.25 0.00 0.00 3.41
919 930 7.454225 ACCATCTCTTATTAATAGGCACTTCC 58.546 38.462 0.00 0.00 41.75 3.46
928 939 1.053424 TAGGCACTTCCGGTTCACTT 58.947 50.000 0.00 0.00 41.75 3.16
947 958 4.504097 CACTTTTTGGTTTGTAGCTGAAGC 59.496 41.667 0.00 0.00 42.49 3.86
951 962 1.079503 GGTTTGTAGCTGAAGCCTCG 58.920 55.000 0.00 0.00 43.38 4.63
1972 1986 5.718801 TGGCCCATAGTAGATTTGGTTTA 57.281 39.130 0.00 0.00 0.00 2.01
1976 1990 9.118367 TGGCCCATAGTAGATTTGGTTTATATA 57.882 33.333 0.00 0.00 0.00 0.86
2056 2070 0.616371 AGCCCGCTATTGTGTAACCA 59.384 50.000 0.00 0.00 34.36 3.67
2058 2072 1.813786 GCCCGCTATTGTGTAACCAAA 59.186 47.619 0.00 0.00 34.36 3.28
2061 2075 3.253677 CCCGCTATTGTGTAACCAAACAA 59.746 43.478 0.00 0.00 40.36 2.83
2064 2078 5.571357 CCGCTATTGTGTAACCAAACAATTC 59.429 40.000 6.37 0.17 42.85 2.17
2166 2212 8.478775 TTCTAGCTTAGTATATTTGAGGAGCA 57.521 34.615 0.00 0.00 0.00 4.26
2171 2217 6.239458 GCTTAGTATATTTGAGGAGCAGGAGT 60.239 42.308 0.00 0.00 0.00 3.85
2175 2221 2.260844 TTTGAGGAGCAGGAGTGTTG 57.739 50.000 0.00 0.00 0.00 3.33
2176 2222 0.250467 TTGAGGAGCAGGAGTGTTGC 60.250 55.000 0.00 0.00 41.83 4.17
2255 2310 2.680312 ACACATATGAAGCGTGCTCT 57.320 45.000 10.38 0.00 33.89 4.09
2445 2508 6.783892 ACAAAACATTATGCACATTCAACC 57.216 33.333 0.00 0.00 0.00 3.77
2446 2509 6.286758 ACAAAACATTATGCACATTCAACCA 58.713 32.000 0.00 0.00 0.00 3.67
2447 2510 6.424509 ACAAAACATTATGCACATTCAACCAG 59.575 34.615 0.00 0.00 0.00 4.00
2485 2548 1.519455 GCCGACGACTCCTCCATTG 60.519 63.158 0.00 0.00 0.00 2.82
2497 2560 1.238439 CTCCATTGTTTGCACCGTCT 58.762 50.000 0.00 0.00 0.00 4.18
2513 2576 2.354403 CCGTCTTTTCCTCCGGTATGTT 60.354 50.000 0.00 0.00 35.78 2.71
2533 2596 1.006758 TCATAGTCACCTCCTCCGGTT 59.993 52.381 0.00 0.00 34.29 4.44
2536 2599 1.003718 GTCACCTCCTCCGGTTTGG 60.004 63.158 0.00 2.66 34.29 3.28
2537 2600 2.359975 CACCTCCTCCGGTTTGGC 60.360 66.667 0.00 0.00 37.80 4.52
2538 2601 2.852075 ACCTCCTCCGGTTTGGCA 60.852 61.111 0.00 0.00 37.80 4.92
2539 2602 2.434331 CCTCCTCCGGTTTGGCAA 59.566 61.111 0.00 0.00 37.80 4.52
2540 2603 1.228429 CCTCCTCCGGTTTGGCAAA 60.228 57.895 8.93 8.93 37.80 3.68
2541 2604 0.825840 CCTCCTCCGGTTTGGCAAAA 60.826 55.000 15.29 0.00 37.80 2.44
2542 2605 1.256812 CTCCTCCGGTTTGGCAAAAT 58.743 50.000 15.29 0.00 37.80 1.82
2543 2606 1.618343 CTCCTCCGGTTTGGCAAAATT 59.382 47.619 15.29 0.00 37.80 1.82
2544 2607 1.342819 TCCTCCGGTTTGGCAAAATTG 59.657 47.619 15.29 7.26 37.80 2.32
2545 2608 1.342819 CCTCCGGTTTGGCAAAATTGA 59.657 47.619 15.29 9.90 37.80 2.57
2546 2609 2.403259 CTCCGGTTTGGCAAAATTGAC 58.597 47.619 15.29 2.00 37.80 3.18
2547 2610 1.757118 TCCGGTTTGGCAAAATTGACA 59.243 42.857 15.29 0.00 46.35 3.58
2556 2619 5.747951 TGGCAAAATTGACAAATTTGACC 57.252 34.783 25.03 23.45 44.72 4.02
2557 2620 5.435291 TGGCAAAATTGACAAATTTGACCT 58.565 33.333 25.03 2.04 44.72 3.85
2558 2621 6.586344 TGGCAAAATTGACAAATTTGACCTA 58.414 32.000 25.03 10.28 44.72 3.08
2559 2622 7.222872 TGGCAAAATTGACAAATTTGACCTAT 58.777 30.769 25.03 13.80 44.72 2.57
2560 2623 7.172875 TGGCAAAATTGACAAATTTGACCTATG 59.827 33.333 25.03 13.77 44.72 2.23
2561 2624 7.361116 GGCAAAATTGACAAATTTGACCTATGG 60.361 37.037 25.81 8.50 43.63 2.74
2562 2625 7.387397 GCAAAATTGACAAATTTGACCTATGGA 59.613 33.333 25.81 0.00 43.63 3.41
2563 2626 8.711457 CAAAATTGACAAATTTGACCTATGGAC 58.289 33.333 24.64 5.11 43.63 4.02
2564 2627 5.621197 TTGACAAATTTGACCTATGGACG 57.379 39.130 24.64 0.00 0.00 4.79
2565 2628 4.900684 TGACAAATTTGACCTATGGACGA 58.099 39.130 24.64 0.00 0.00 4.20
2566 2629 5.309638 TGACAAATTTGACCTATGGACGAA 58.690 37.500 24.64 0.00 0.00 3.85
2567 2630 5.765677 TGACAAATTTGACCTATGGACGAAA 59.234 36.000 24.64 0.00 0.00 3.46
2568 2631 6.432783 TGACAAATTTGACCTATGGACGAAAT 59.567 34.615 24.64 0.00 0.00 2.17
2569 2632 6.852664 ACAAATTTGACCTATGGACGAAATC 58.147 36.000 24.64 0.00 0.00 2.17
2570 2633 6.432783 ACAAATTTGACCTATGGACGAAATCA 59.567 34.615 24.64 0.00 0.00 2.57
2571 2634 7.040062 ACAAATTTGACCTATGGACGAAATCAA 60.040 33.333 24.64 0.00 0.00 2.57
2572 2635 7.461182 AATTTGACCTATGGACGAAATCAAA 57.539 32.000 0.00 0.00 38.52 2.69
2573 2636 7.645058 ATTTGACCTATGGACGAAATCAAAT 57.355 32.000 0.00 0.00 39.34 2.32
2574 2637 6.677781 TTGACCTATGGACGAAATCAAATC 57.322 37.500 0.00 0.00 0.00 2.17
2575 2638 5.739959 TGACCTATGGACGAAATCAAATCA 58.260 37.500 0.00 0.00 0.00 2.57
2576 2639 5.584649 TGACCTATGGACGAAATCAAATCAC 59.415 40.000 0.00 0.00 0.00 3.06
2577 2640 5.496556 ACCTATGGACGAAATCAAATCACA 58.503 37.500 0.00 0.00 0.00 3.58
2578 2641 5.943416 ACCTATGGACGAAATCAAATCACAA 59.057 36.000 0.00 0.00 0.00 3.33
2579 2642 6.432783 ACCTATGGACGAAATCAAATCACAAA 59.567 34.615 0.00 0.00 0.00 2.83
2580 2643 7.040062 ACCTATGGACGAAATCAAATCACAAAA 60.040 33.333 0.00 0.00 0.00 2.44
2581 2644 7.975616 CCTATGGACGAAATCAAATCACAAAAT 59.024 33.333 0.00 0.00 0.00 1.82
2584 2647 9.703892 ATGGACGAAATCAAATCACAAAATAAA 57.296 25.926 0.00 0.00 0.00 1.40
2585 2648 8.973378 TGGACGAAATCAAATCACAAAATAAAC 58.027 29.630 0.00 0.00 0.00 2.01
2586 2649 9.191995 GGACGAAATCAAATCACAAAATAAACT 57.808 29.630 0.00 0.00 0.00 2.66
2593 2656 9.874205 ATCAAATCACAAAATAAACTACCCATG 57.126 29.630 0.00 0.00 0.00 3.66
2594 2657 9.083422 TCAAATCACAAAATAAACTACCCATGA 57.917 29.630 0.00 0.00 0.00 3.07
2595 2658 9.703892 CAAATCACAAAATAAACTACCCATGAA 57.296 29.630 0.00 0.00 0.00 2.57
2597 2660 9.705290 AATCACAAAATAAACTACCCATGAAAC 57.295 29.630 0.00 0.00 0.00 2.78
2598 2661 8.472007 TCACAAAATAAACTACCCATGAAACT 57.528 30.769 0.00 0.00 0.00 2.66
2599 2662 9.575868 TCACAAAATAAACTACCCATGAAACTA 57.424 29.630 0.00 0.00 0.00 2.24
2612 2675 3.811722 TGAAACTATTTCACGCTGCTG 57.188 42.857 0.00 0.00 44.21 4.41
2613 2676 3.398406 TGAAACTATTTCACGCTGCTGA 58.602 40.909 0.00 0.00 44.21 4.26
2614 2677 3.186409 TGAAACTATTTCACGCTGCTGAC 59.814 43.478 0.00 0.00 44.21 3.51
2615 2678 1.726853 ACTATTTCACGCTGCTGACC 58.273 50.000 0.00 0.00 0.00 4.02
2616 2679 1.276421 ACTATTTCACGCTGCTGACCT 59.724 47.619 0.00 0.00 0.00 3.85
2617 2680 2.289694 ACTATTTCACGCTGCTGACCTT 60.290 45.455 0.00 0.00 0.00 3.50
2618 2681 1.609208 ATTTCACGCTGCTGACCTTT 58.391 45.000 0.00 0.00 0.00 3.11
2619 2682 1.388547 TTTCACGCTGCTGACCTTTT 58.611 45.000 0.00 0.00 0.00 2.27
2620 2683 1.388547 TTCACGCTGCTGACCTTTTT 58.611 45.000 0.00 0.00 0.00 1.94
2621 2684 2.248280 TCACGCTGCTGACCTTTTTA 57.752 45.000 0.00 0.00 0.00 1.52
2622 2685 2.778299 TCACGCTGCTGACCTTTTTAT 58.222 42.857 0.00 0.00 0.00 1.40
2623 2686 2.483877 TCACGCTGCTGACCTTTTTATG 59.516 45.455 0.00 0.00 0.00 1.90
2624 2687 2.226437 CACGCTGCTGACCTTTTTATGT 59.774 45.455 0.00 0.00 0.00 2.29
2625 2688 2.226437 ACGCTGCTGACCTTTTTATGTG 59.774 45.455 0.00 0.00 0.00 3.21
2626 2689 2.483877 CGCTGCTGACCTTTTTATGTGA 59.516 45.455 0.00 0.00 0.00 3.58
2627 2690 3.667960 CGCTGCTGACCTTTTTATGTGAC 60.668 47.826 0.00 0.00 0.00 3.67
2628 2691 3.667960 GCTGCTGACCTTTTTATGTGACG 60.668 47.826 0.00 0.00 0.00 4.35
2629 2692 2.225491 TGCTGACCTTTTTATGTGACGC 59.775 45.455 0.00 0.00 0.00 5.19
2630 2693 2.414161 GCTGACCTTTTTATGTGACGCC 60.414 50.000 0.00 0.00 0.00 5.68
2631 2694 2.156098 TGACCTTTTTATGTGACGCCC 58.844 47.619 0.00 0.00 0.00 6.13
2632 2695 1.129811 GACCTTTTTATGTGACGCCCG 59.870 52.381 0.00 0.00 0.00 6.13
2633 2696 1.270947 ACCTTTTTATGTGACGCCCGA 60.271 47.619 0.00 0.00 0.00 5.14
2634 2697 1.129811 CCTTTTTATGTGACGCCCGAC 59.870 52.381 0.00 0.00 0.00 4.79
2635 2698 1.801771 CTTTTTATGTGACGCCCGACA 59.198 47.619 0.00 0.00 0.00 4.35
2636 2699 2.102070 TTTTATGTGACGCCCGACAT 57.898 45.000 0.00 0.00 36.72 3.06
2637 2700 2.963548 TTTATGTGACGCCCGACATA 57.036 45.000 0.00 0.00 34.60 2.29
2638 2701 2.963548 TTATGTGACGCCCGACATAA 57.036 45.000 9.49 9.49 34.60 1.90
2639 2702 2.963548 TATGTGACGCCCGACATAAA 57.036 45.000 0.00 0.00 34.60 1.40
2640 2703 1.651987 ATGTGACGCCCGACATAAAG 58.348 50.000 0.00 0.00 30.86 1.85
2641 2704 0.604073 TGTGACGCCCGACATAAAGA 59.396 50.000 0.00 0.00 0.00 2.52
2642 2705 0.997196 GTGACGCCCGACATAAAGAC 59.003 55.000 0.00 0.00 0.00 3.01
2643 2706 0.457166 TGACGCCCGACATAAAGACG 60.457 55.000 0.00 0.00 35.18 4.18
2644 2707 0.457337 GACGCCCGACATAAAGACGT 60.457 55.000 0.00 0.00 33.56 4.34
2645 2708 0.457337 ACGCCCGACATAAAGACGTC 60.457 55.000 7.70 7.70 33.56 4.34
2646 2709 0.457166 CGCCCGACATAAAGACGTCA 60.457 55.000 19.50 0.00 33.56 4.35
2647 2710 0.997196 GCCCGACATAAAGACGTCAC 59.003 55.000 19.50 0.00 33.56 3.67
2648 2711 1.670674 GCCCGACATAAAGACGTCACA 60.671 52.381 19.50 1.96 33.56 3.58
2649 2712 1.990563 CCCGACATAAAGACGTCACAC 59.009 52.381 19.50 1.00 33.56 3.82
2650 2713 2.352421 CCCGACATAAAGACGTCACACT 60.352 50.000 19.50 1.06 33.56 3.55
2651 2714 3.119743 CCCGACATAAAGACGTCACACTA 60.120 47.826 19.50 3.44 33.56 2.74
2652 2715 3.850273 CCGACATAAAGACGTCACACTAC 59.150 47.826 19.50 2.67 33.56 2.73
2653 2716 4.469552 CGACATAAAGACGTCACACTACA 58.530 43.478 19.50 0.00 32.24 2.74
2654 2717 4.320164 CGACATAAAGACGTCACACTACAC 59.680 45.833 19.50 2.03 32.24 2.90
2655 2718 5.449107 ACATAAAGACGTCACACTACACT 57.551 39.130 19.50 0.00 0.00 3.55
2656 2719 5.220381 ACATAAAGACGTCACACTACACTG 58.780 41.667 19.50 4.99 0.00 3.66
2657 2720 3.795623 AAAGACGTCACACTACACTGT 57.204 42.857 19.50 0.00 0.00 3.55
2658 2721 2.776312 AGACGTCACACTACACTGTG 57.224 50.000 19.50 6.19 42.62 3.66
2659 2722 1.129326 GACGTCACACTACACTGTGC 58.871 55.000 11.55 0.00 41.27 4.57
2660 2723 0.458260 ACGTCACACTACACTGTGCA 59.542 50.000 7.90 0.00 41.27 4.57
2661 2724 1.134936 ACGTCACACTACACTGTGCAA 60.135 47.619 7.90 0.00 41.27 4.08
2662 2725 1.257936 CGTCACACTACACTGTGCAAC 59.742 52.381 7.90 0.00 41.27 4.17
2663 2726 1.257936 GTCACACTACACTGTGCAACG 59.742 52.381 7.90 0.00 42.39 4.10
2664 2727 0.042188 CACACTACACTGTGCAACGC 60.042 55.000 7.90 0.00 42.39 4.84
2665 2728 1.157870 ACACTACACTGTGCAACGCC 61.158 55.000 7.90 0.00 42.39 5.68
2666 2729 0.880278 CACTACACTGTGCAACGCCT 60.880 55.000 7.90 0.00 42.39 5.52
2667 2730 0.600255 ACTACACTGTGCAACGCCTC 60.600 55.000 7.90 0.00 42.39 4.70
2668 2731 0.599991 CTACACTGTGCAACGCCTCA 60.600 55.000 7.90 0.00 42.39 3.86
2669 2732 0.878523 TACACTGTGCAACGCCTCAC 60.879 55.000 7.90 0.00 42.39 3.51
2670 2733 2.179547 CACTGTGCAACGCCTCACA 61.180 57.895 0.00 4.54 42.39 3.58
2672 2735 2.503546 TGTGCAACGCCTCACAGA 59.496 55.556 0.00 0.00 42.39 3.41
2673 2736 1.071299 TGTGCAACGCCTCACAGAT 59.929 52.632 0.00 0.00 42.39 2.90
2674 2737 0.320050 TGTGCAACGCCTCACAGATA 59.680 50.000 0.00 0.00 42.39 1.98
2675 2738 1.066215 TGTGCAACGCCTCACAGATAT 60.066 47.619 0.00 0.00 42.39 1.63
2676 2739 1.328680 GTGCAACGCCTCACAGATATG 59.671 52.381 0.00 0.00 33.63 1.78
2677 2740 0.305922 GCAACGCCTCACAGATATGC 59.694 55.000 0.00 0.00 0.00 3.14
2679 2742 3.238260 CGCCTCACAGATATGCGC 58.762 61.111 0.00 0.00 38.69 6.09
2680 2743 1.300465 CGCCTCACAGATATGCGCT 60.300 57.895 9.73 0.00 38.69 5.92
2681 2744 0.039165 CGCCTCACAGATATGCGCTA 60.039 55.000 9.73 0.00 38.69 4.26
2682 2745 1.423395 GCCTCACAGATATGCGCTAC 58.577 55.000 9.73 0.00 0.00 3.58
2683 2746 1.269778 GCCTCACAGATATGCGCTACA 60.270 52.381 9.73 0.00 0.00 2.74
2684 2747 2.398498 CCTCACAGATATGCGCTACAC 58.602 52.381 9.73 0.00 0.00 2.90
2685 2748 2.223805 CCTCACAGATATGCGCTACACA 60.224 50.000 9.73 0.00 0.00 3.72
2686 2749 2.791560 CTCACAGATATGCGCTACACAC 59.208 50.000 9.73 0.00 0.00 3.82
2687 2750 1.860950 CACAGATATGCGCTACACACC 59.139 52.381 9.73 0.00 0.00 4.16
2688 2751 1.757118 ACAGATATGCGCTACACACCT 59.243 47.619 9.73 0.00 0.00 4.00
2689 2752 2.130395 CAGATATGCGCTACACACCTG 58.870 52.381 9.73 3.24 0.00 4.00
2690 2753 1.069204 AGATATGCGCTACACACCTGG 59.931 52.381 9.73 0.00 0.00 4.45
2691 2754 0.106708 ATATGCGCTACACACCTGGG 59.893 55.000 9.73 0.00 0.00 4.45
2692 2755 2.587322 TATGCGCTACACACCTGGGC 62.587 60.000 9.73 0.00 39.58 5.36
2693 2756 4.697756 GCGCTACACACCTGGGCA 62.698 66.667 0.00 0.00 39.08 5.36
2694 2757 2.434884 CGCTACACACCTGGGCAG 60.435 66.667 0.00 0.00 0.00 4.85
2695 2758 2.747855 GCTACACACCTGGGCAGC 60.748 66.667 0.00 0.00 0.00 5.25
2696 2759 2.434884 CTACACACCTGGGCAGCG 60.435 66.667 0.00 0.00 0.00 5.18
2697 2760 3.238497 TACACACCTGGGCAGCGT 61.238 61.111 0.00 0.00 0.00 5.07
2698 2761 3.234630 TACACACCTGGGCAGCGTC 62.235 63.158 0.00 0.00 0.00 5.19
2707 2770 3.869272 GGCAGCGTCGCATCCTTG 61.869 66.667 21.09 9.55 0.00 3.61
2708 2771 3.121030 GCAGCGTCGCATCCTTGT 61.121 61.111 21.09 0.00 0.00 3.16
2709 2772 2.780643 CAGCGTCGCATCCTTGTG 59.219 61.111 21.09 2.74 34.56 3.33
2710 2773 1.737735 CAGCGTCGCATCCTTGTGA 60.738 57.895 21.09 0.00 40.00 3.58
2711 2774 1.086067 CAGCGTCGCATCCTTGTGAT 61.086 55.000 21.09 0.00 43.82 3.06
2712 2775 0.807667 AGCGTCGCATCCTTGTGATC 60.808 55.000 21.09 0.00 43.82 2.92
2713 2776 1.766143 GCGTCGCATCCTTGTGATCC 61.766 60.000 13.44 0.00 43.82 3.36
2714 2777 1.482621 CGTCGCATCCTTGTGATCCG 61.483 60.000 0.00 0.00 43.82 4.18
2715 2778 0.179111 GTCGCATCCTTGTGATCCGA 60.179 55.000 0.00 0.00 41.27 4.55
2716 2779 0.534873 TCGCATCCTTGTGATCCGAA 59.465 50.000 0.00 0.00 40.60 4.30
2717 2780 1.066502 TCGCATCCTTGTGATCCGAAA 60.067 47.619 0.00 0.00 40.60 3.46
2718 2781 1.737236 CGCATCCTTGTGATCCGAAAA 59.263 47.619 0.00 0.00 36.74 2.29
2719 2782 2.355756 CGCATCCTTGTGATCCGAAAAT 59.644 45.455 0.00 0.00 36.74 1.82
2720 2783 3.181497 CGCATCCTTGTGATCCGAAAATT 60.181 43.478 0.00 0.00 36.74 1.82
2721 2784 4.035091 CGCATCCTTGTGATCCGAAAATTA 59.965 41.667 0.00 0.00 36.74 1.40
2722 2785 5.277974 CGCATCCTTGTGATCCGAAAATTAT 60.278 40.000 0.00 0.00 36.74 1.28
2723 2786 6.507023 GCATCCTTGTGATCCGAAAATTATT 58.493 36.000 0.00 0.00 0.00 1.40
2724 2787 7.519809 CGCATCCTTGTGATCCGAAAATTATTA 60.520 37.037 0.00 0.00 36.74 0.98
2725 2788 8.134895 GCATCCTTGTGATCCGAAAATTATTAA 58.865 33.333 0.00 0.00 0.00 1.40
2726 2789 9.669353 CATCCTTGTGATCCGAAAATTATTAAG 57.331 33.333 0.00 0.00 0.00 1.85
2727 2790 8.801882 TCCTTGTGATCCGAAAATTATTAAGT 57.198 30.769 0.00 0.00 0.00 2.24
2728 2791 8.889717 TCCTTGTGATCCGAAAATTATTAAGTC 58.110 33.333 0.00 0.00 0.00 3.01
2729 2792 8.673711 CCTTGTGATCCGAAAATTATTAAGTCA 58.326 33.333 0.00 0.00 0.00 3.41
2730 2793 9.708222 CTTGTGATCCGAAAATTATTAAGTCAG 57.292 33.333 0.00 0.00 0.00 3.51
2731 2794 8.786826 TGTGATCCGAAAATTATTAAGTCAGT 57.213 30.769 0.00 0.00 0.00 3.41
2732 2795 8.664798 TGTGATCCGAAAATTATTAAGTCAGTG 58.335 33.333 0.00 0.00 0.00 3.66
2733 2796 8.665685 GTGATCCGAAAATTATTAAGTCAGTGT 58.334 33.333 0.00 0.00 0.00 3.55
2734 2797 8.664798 TGATCCGAAAATTATTAAGTCAGTGTG 58.335 33.333 0.00 0.00 0.00 3.82
2735 2798 6.837992 TCCGAAAATTATTAAGTCAGTGTGC 58.162 36.000 0.00 0.00 0.00 4.57
2736 2799 6.428465 TCCGAAAATTATTAAGTCAGTGTGCA 59.572 34.615 0.00 0.00 0.00 4.57
2737 2800 6.742718 CCGAAAATTATTAAGTCAGTGTGCAG 59.257 38.462 0.00 0.00 0.00 4.41
2738 2801 6.249260 CGAAAATTATTAAGTCAGTGTGCAGC 59.751 38.462 0.00 0.00 0.00 5.25
2739 2802 4.864916 ATTATTAAGTCAGTGTGCAGCG 57.135 40.909 0.00 0.00 0.00 5.18
2740 2803 0.798776 ATTAAGTCAGTGTGCAGCGC 59.201 50.000 0.00 0.00 0.00 5.92
2741 2804 1.227999 TTAAGTCAGTGTGCAGCGCC 61.228 55.000 2.29 0.00 0.00 6.53
2742 2805 2.099652 TAAGTCAGTGTGCAGCGCCT 62.100 55.000 2.29 0.00 0.00 5.52
2743 2806 3.720193 GTCAGTGTGCAGCGCCTG 61.720 66.667 2.29 14.85 34.12 4.85
2744 2807 3.927548 TCAGTGTGCAGCGCCTGA 61.928 61.111 18.04 18.04 32.44 3.86
2745 2808 3.420606 CAGTGTGCAGCGCCTGAG 61.421 66.667 15.59 0.00 32.44 3.35
2746 2809 3.619767 AGTGTGCAGCGCCTGAGA 61.620 61.111 2.29 0.00 32.44 3.27
2747 2810 3.117171 GTGTGCAGCGCCTGAGAG 61.117 66.667 2.29 0.00 32.44 3.20
2748 2811 3.305516 TGTGCAGCGCCTGAGAGA 61.306 61.111 2.29 0.00 32.44 3.10
2749 2812 2.186384 GTGCAGCGCCTGAGAGAT 59.814 61.111 2.29 0.00 32.44 2.75
2750 2813 1.322538 TGTGCAGCGCCTGAGAGATA 61.323 55.000 2.29 0.00 32.44 1.98
2751 2814 0.597118 GTGCAGCGCCTGAGAGATAG 60.597 60.000 2.29 0.00 32.44 2.08
2752 2815 1.006337 GCAGCGCCTGAGAGATAGG 60.006 63.158 2.29 0.00 38.39 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.159296 ACTCAAAAGCACAAACCGAACC 60.159 45.455 0.00 0.00 0.00 3.62
1 2 3.145212 ACTCAAAAGCACAAACCGAAC 57.855 42.857 0.00 0.00 0.00 3.95
2 3 4.966965 TTACTCAAAAGCACAAACCGAA 57.033 36.364 0.00 0.00 0.00 4.30
3 4 4.396790 AGTTTACTCAAAAGCACAAACCGA 59.603 37.500 0.00 0.00 0.00 4.69
4 5 4.668289 AGTTTACTCAAAAGCACAAACCG 58.332 39.130 0.00 0.00 0.00 4.44
5 6 7.023197 TCTAGTTTACTCAAAAGCACAAACC 57.977 36.000 0.00 0.00 0.00 3.27
6 7 8.342634 TCATCTAGTTTACTCAAAAGCACAAAC 58.657 33.333 0.00 0.00 0.00 2.93
7 8 8.445275 TCATCTAGTTTACTCAAAAGCACAAA 57.555 30.769 0.00 0.00 0.00 2.83
8 9 8.621532 ATCATCTAGTTTACTCAAAAGCACAA 57.378 30.769 0.00 0.00 0.00 3.33
9 10 9.151471 GTATCATCTAGTTTACTCAAAAGCACA 57.849 33.333 0.00 0.00 0.00 4.57
10 11 8.604890 GGTATCATCTAGTTTACTCAAAAGCAC 58.395 37.037 0.00 0.00 0.00 4.40
11 12 7.769044 GGGTATCATCTAGTTTACTCAAAAGCA 59.231 37.037 0.00 0.00 0.00 3.91
12 13 7.226918 GGGGTATCATCTAGTTTACTCAAAAGC 59.773 40.741 0.00 0.00 0.00 3.51
13 14 7.438459 CGGGGTATCATCTAGTTTACTCAAAAG 59.562 40.741 0.00 0.00 0.00 2.27
14 15 7.270047 CGGGGTATCATCTAGTTTACTCAAAA 58.730 38.462 0.00 0.00 0.00 2.44
15 16 6.684613 GCGGGGTATCATCTAGTTTACTCAAA 60.685 42.308 0.00 0.00 0.00 2.69
16 17 5.221382 GCGGGGTATCATCTAGTTTACTCAA 60.221 44.000 0.00 0.00 0.00 3.02
17 18 4.280174 GCGGGGTATCATCTAGTTTACTCA 59.720 45.833 0.00 0.00 0.00 3.41
18 19 4.280174 TGCGGGGTATCATCTAGTTTACTC 59.720 45.833 0.00 0.00 0.00 2.59
19 20 4.038883 GTGCGGGGTATCATCTAGTTTACT 59.961 45.833 0.00 0.00 0.00 2.24
20 21 4.304939 GTGCGGGGTATCATCTAGTTTAC 58.695 47.826 0.00 0.00 0.00 2.01
21 22 3.005050 CGTGCGGGGTATCATCTAGTTTA 59.995 47.826 0.00 0.00 0.00 2.01
22 23 2.223971 CGTGCGGGGTATCATCTAGTTT 60.224 50.000 0.00 0.00 0.00 2.66
23 24 1.340248 CGTGCGGGGTATCATCTAGTT 59.660 52.381 0.00 0.00 0.00 2.24
24 25 0.959553 CGTGCGGGGTATCATCTAGT 59.040 55.000 0.00 0.00 0.00 2.57
25 26 0.959553 ACGTGCGGGGTATCATCTAG 59.040 55.000 0.00 0.00 0.00 2.43
26 27 1.067974 CAACGTGCGGGGTATCATCTA 59.932 52.381 0.00 0.00 0.00 1.98
27 28 0.179084 CAACGTGCGGGGTATCATCT 60.179 55.000 0.00 0.00 0.00 2.90
28 29 0.461339 ACAACGTGCGGGGTATCATC 60.461 55.000 0.00 0.00 0.00 2.92
29 30 0.035820 AACAACGTGCGGGGTATCAT 60.036 50.000 0.00 0.00 0.00 2.45
30 31 0.951525 CAACAACGTGCGGGGTATCA 60.952 55.000 0.00 0.00 0.00 2.15
31 32 1.791662 CAACAACGTGCGGGGTATC 59.208 57.895 0.00 0.00 0.00 2.24
32 33 2.329614 GCAACAACGTGCGGGGTAT 61.330 57.895 0.00 0.00 34.21 2.73
33 34 2.973600 GCAACAACGTGCGGGGTA 60.974 61.111 0.00 0.00 34.21 3.69
39 40 0.450184 ATATTCCCGCAACAACGTGC 59.550 50.000 0.00 0.00 41.32 5.34
40 41 2.911819 AATATTCCCGCAACAACGTG 57.088 45.000 0.00 0.00 0.00 4.49
41 42 3.242936 GCATAATATTCCCGCAACAACGT 60.243 43.478 0.00 0.00 0.00 3.99
42 43 3.242903 TGCATAATATTCCCGCAACAACG 60.243 43.478 0.00 0.00 0.00 4.10
43 44 4.300189 TGCATAATATTCCCGCAACAAC 57.700 40.909 0.00 0.00 0.00 3.32
44 45 4.991153 TTGCATAATATTCCCGCAACAA 57.009 36.364 12.54 0.00 37.64 2.83
47 48 3.696548 TGTGTTGCATAATATTCCCGCAA 59.303 39.130 12.54 12.54 40.08 4.85
48 49 3.282885 TGTGTTGCATAATATTCCCGCA 58.717 40.909 0.00 0.00 0.00 5.69
49 50 3.980646 TGTGTTGCATAATATTCCCGC 57.019 42.857 0.00 0.00 0.00 6.13
50 51 6.502652 TGAAATGTGTTGCATAATATTCCCG 58.497 36.000 0.00 0.00 36.67 5.14
51 52 7.436080 CACTGAAATGTGTTGCATAATATTCCC 59.564 37.037 0.00 0.00 36.67 3.97
52 53 8.343974 CACTGAAATGTGTTGCATAATATTCC 57.656 34.615 0.00 0.00 36.67 3.01
66 67 8.238631 TCATACAATGAATCACACTGAAATGTG 58.761 33.333 0.00 0.00 42.79 3.21
67 68 8.339344 TCATACAATGAATCACACTGAAATGT 57.661 30.769 0.00 0.00 36.11 2.71
198 199 6.183360 GCAAACGGACATGAGAATTTTCATTC 60.183 38.462 8.69 9.63 39.45 2.67
199 200 5.634859 GCAAACGGACATGAGAATTTTCATT 59.365 36.000 8.69 1.89 35.67 2.57
200 201 5.163513 GCAAACGGACATGAGAATTTTCAT 58.836 37.500 5.67 5.67 38.30 2.57
201 202 4.037327 TGCAAACGGACATGAGAATTTTCA 59.963 37.500 0.00 0.54 0.00 2.69
202 203 4.545610 TGCAAACGGACATGAGAATTTTC 58.454 39.130 0.00 0.00 0.00 2.29
203 204 4.582701 TGCAAACGGACATGAGAATTTT 57.417 36.364 0.00 0.00 0.00 1.82
204 205 4.022068 ACATGCAAACGGACATGAGAATTT 60.022 37.500 9.77 0.00 45.23 1.82
205 206 3.507233 ACATGCAAACGGACATGAGAATT 59.493 39.130 9.77 0.00 45.23 2.17
206 207 3.084039 ACATGCAAACGGACATGAGAAT 58.916 40.909 9.77 0.00 45.23 2.40
207 208 2.503331 ACATGCAAACGGACATGAGAA 58.497 42.857 9.77 0.00 45.23 2.87
208 209 2.183478 ACATGCAAACGGACATGAGA 57.817 45.000 9.77 0.00 45.23 3.27
209 210 2.226200 TCAACATGCAAACGGACATGAG 59.774 45.455 9.77 2.76 45.23 2.90
210 211 2.225467 TCAACATGCAAACGGACATGA 58.775 42.857 9.77 0.00 45.23 3.07
212 213 2.503331 TCTCAACATGCAAACGGACAT 58.497 42.857 0.00 0.00 0.00 3.06
213 214 1.960417 TCTCAACATGCAAACGGACA 58.040 45.000 0.00 0.00 0.00 4.02
214 215 2.226437 ACATCTCAACATGCAAACGGAC 59.774 45.455 0.00 0.00 0.00 4.79
215 216 2.226200 CACATCTCAACATGCAAACGGA 59.774 45.455 0.00 0.00 0.00 4.69
216 217 2.030893 ACACATCTCAACATGCAAACGG 60.031 45.455 0.00 0.00 0.00 4.44
217 218 3.058708 AGACACATCTCAACATGCAAACG 60.059 43.478 0.00 0.00 0.00 3.60
218 219 4.494350 AGACACATCTCAACATGCAAAC 57.506 40.909 0.00 0.00 0.00 2.93
219 220 5.518848 AAAGACACATCTCAACATGCAAA 57.481 34.783 0.00 0.00 32.34 3.68
220 221 5.518848 AAAAGACACATCTCAACATGCAA 57.481 34.783 0.00 0.00 32.34 4.08
221 222 5.518848 AAAAAGACACATCTCAACATGCA 57.481 34.783 0.00 0.00 32.34 3.96
240 241 8.028354 ACTTGATCGTGAAATATGCATGAAAAA 58.972 29.630 10.16 0.00 35.17 1.94
241 242 7.485595 CACTTGATCGTGAAATATGCATGAAAA 59.514 33.333 10.16 0.00 37.06 2.29
242 243 6.968335 CACTTGATCGTGAAATATGCATGAAA 59.032 34.615 10.16 0.00 37.06 2.69
243 244 6.458615 CCACTTGATCGTGAAATATGCATGAA 60.459 38.462 10.16 0.00 37.06 2.57
244 245 5.007921 CCACTTGATCGTGAAATATGCATGA 59.992 40.000 10.16 0.00 37.06 3.07
245 246 5.209977 CCACTTGATCGTGAAATATGCATG 58.790 41.667 10.16 0.00 37.06 4.06
246 247 4.261322 GCCACTTGATCGTGAAATATGCAT 60.261 41.667 3.79 3.79 37.06 3.96
247 248 3.065233 GCCACTTGATCGTGAAATATGCA 59.935 43.478 2.63 0.00 37.06 3.96
248 249 3.065233 TGCCACTTGATCGTGAAATATGC 59.935 43.478 2.63 0.00 37.06 3.14
249 250 4.880886 TGCCACTTGATCGTGAAATATG 57.119 40.909 2.63 0.00 37.06 1.78
250 251 4.261322 GCATGCCACTTGATCGTGAAATAT 60.261 41.667 6.36 0.00 37.06 1.28
251 252 3.065233 GCATGCCACTTGATCGTGAAATA 59.935 43.478 6.36 0.00 37.06 1.40
252 253 2.159338 GCATGCCACTTGATCGTGAAAT 60.159 45.455 6.36 0.00 37.06 2.17
253 254 1.199789 GCATGCCACTTGATCGTGAAA 59.800 47.619 6.36 0.00 37.06 2.69
254 255 0.804364 GCATGCCACTTGATCGTGAA 59.196 50.000 6.36 0.00 37.06 3.18
255 256 0.036105 AGCATGCCACTTGATCGTGA 60.036 50.000 15.66 0.00 37.06 4.35
256 257 0.806868 AAGCATGCCACTTGATCGTG 59.193 50.000 15.66 0.00 34.71 4.35
257 258 0.806868 CAAGCATGCCACTTGATCGT 59.193 50.000 15.66 0.00 45.99 3.73
258 259 0.524816 GCAAGCATGCCACTTGATCG 60.525 55.000 19.17 0.00 45.99 3.69
259 260 3.340727 GCAAGCATGCCACTTGATC 57.659 52.632 19.17 2.16 45.99 2.92
270 271 6.982141 CCATATGTCTTTTAACATGCAAGCAT 59.018 34.615 0.86 0.86 40.08 3.79
271 272 6.071447 ACCATATGTCTTTTAACATGCAAGCA 60.071 34.615 1.24 0.00 40.08 3.91
272 273 6.332630 ACCATATGTCTTTTAACATGCAAGC 58.667 36.000 1.24 0.00 40.08 4.01
273 274 8.677300 ACTACCATATGTCTTTTAACATGCAAG 58.323 33.333 1.24 0.00 40.08 4.01
274 275 8.458052 CACTACCATATGTCTTTTAACATGCAA 58.542 33.333 1.24 0.00 40.08 4.08
275 276 7.066887 CCACTACCATATGTCTTTTAACATGCA 59.933 37.037 1.24 0.00 40.08 3.96
276 277 7.417612 CCACTACCATATGTCTTTTAACATGC 58.582 38.462 1.24 0.00 40.08 4.06
277 278 7.013274 CCCCACTACCATATGTCTTTTAACATG 59.987 40.741 1.24 0.00 40.08 3.21
278 279 7.060421 CCCCACTACCATATGTCTTTTAACAT 58.940 38.462 1.24 0.00 42.41 2.71
279 280 6.419791 CCCCACTACCATATGTCTTTTAACA 58.580 40.000 1.24 0.00 0.00 2.41
280 281 5.826208 CCCCCACTACCATATGTCTTTTAAC 59.174 44.000 1.24 0.00 0.00 2.01
281 282 5.493250 ACCCCCACTACCATATGTCTTTTAA 59.507 40.000 1.24 0.00 0.00 1.52
282 283 5.041015 ACCCCCACTACCATATGTCTTTTA 58.959 41.667 1.24 0.00 0.00 1.52
283 284 3.856206 ACCCCCACTACCATATGTCTTTT 59.144 43.478 1.24 0.00 0.00 2.27
284 285 3.202151 CACCCCCACTACCATATGTCTTT 59.798 47.826 1.24 0.00 0.00 2.52
285 286 2.777692 CACCCCCACTACCATATGTCTT 59.222 50.000 1.24 0.00 0.00 3.01
286 287 2.408565 CACCCCCACTACCATATGTCT 58.591 52.381 1.24 0.00 0.00 3.41
287 288 1.420138 CCACCCCCACTACCATATGTC 59.580 57.143 1.24 0.00 0.00 3.06
288 289 1.010294 TCCACCCCCACTACCATATGT 59.990 52.381 1.24 0.00 0.00 2.29
289 290 1.420138 GTCCACCCCCACTACCATATG 59.580 57.143 0.00 0.00 0.00 1.78
290 291 1.697945 GGTCCACCCCCACTACCATAT 60.698 57.143 0.00 0.00 0.00 1.78
291 292 0.326808 GGTCCACCCCCACTACCATA 60.327 60.000 0.00 0.00 0.00 2.74
292 293 1.618447 GGTCCACCCCCACTACCAT 60.618 63.158 0.00 0.00 0.00 3.55
293 294 2.204029 GGTCCACCCCCACTACCA 60.204 66.667 0.00 0.00 0.00 3.25
294 295 1.138228 AAAGGTCCACCCCCACTACC 61.138 60.000 0.00 0.00 36.42 3.18
295 296 0.775542 AAAAGGTCCACCCCCACTAC 59.224 55.000 0.00 0.00 36.42 2.73
296 297 1.069775 GAAAAGGTCCACCCCCACTA 58.930 55.000 0.00 0.00 36.42 2.74
297 298 0.701310 AGAAAAGGTCCACCCCCACT 60.701 55.000 0.00 0.00 36.42 4.00
298 299 0.251209 GAGAAAAGGTCCACCCCCAC 60.251 60.000 0.00 0.00 36.42 4.61
299 300 0.699577 TGAGAAAAGGTCCACCCCCA 60.700 55.000 0.00 0.00 36.42 4.96
300 301 0.704664 ATGAGAAAAGGTCCACCCCC 59.295 55.000 0.00 0.00 36.42 5.40
301 302 1.839424 CATGAGAAAAGGTCCACCCC 58.161 55.000 0.00 0.00 36.42 4.95
302 303 1.177401 GCATGAGAAAAGGTCCACCC 58.823 55.000 0.00 0.00 36.42 4.61
303 304 1.909700 TGCATGAGAAAAGGTCCACC 58.090 50.000 0.00 0.00 0.00 4.61
304 305 2.821969 ACATGCATGAGAAAAGGTCCAC 59.178 45.455 32.75 0.00 0.00 4.02
305 306 3.159213 ACATGCATGAGAAAAGGTCCA 57.841 42.857 32.75 0.00 0.00 4.02
306 307 3.256631 ACAACATGCATGAGAAAAGGTCC 59.743 43.478 32.75 0.00 0.00 4.46
307 308 4.232221 CACAACATGCATGAGAAAAGGTC 58.768 43.478 32.75 0.00 0.00 3.85
308 309 3.638160 ACACAACATGCATGAGAAAAGGT 59.362 39.130 32.75 16.62 0.00 3.50
309 310 3.985279 CACACAACATGCATGAGAAAAGG 59.015 43.478 32.75 16.03 0.00 3.11
310 311 4.862350 TCACACAACATGCATGAGAAAAG 58.138 39.130 32.75 17.73 0.00 2.27
311 312 4.915158 TCACACAACATGCATGAGAAAA 57.085 36.364 32.75 8.98 0.00 2.29
312 313 4.519730 TCATCACACAACATGCATGAGAAA 59.480 37.500 32.75 11.26 30.70 2.52
313 314 4.073549 TCATCACACAACATGCATGAGAA 58.926 39.130 32.75 10.74 30.70 2.87
314 315 3.677190 TCATCACACAACATGCATGAGA 58.323 40.909 32.75 18.25 30.70 3.27
315 316 4.142469 ACATCATCACACAACATGCATGAG 60.142 41.667 32.75 24.30 35.42 2.90
316 317 3.759618 ACATCATCACACAACATGCATGA 59.240 39.130 32.75 10.20 36.06 3.07
317 318 3.857093 CACATCATCACACAACATGCATG 59.143 43.478 25.09 25.09 0.00 4.06
318 319 3.119280 CCACATCATCACACAACATGCAT 60.119 43.478 0.00 0.00 0.00 3.96
319 320 2.229302 CCACATCATCACACAACATGCA 59.771 45.455 0.00 0.00 0.00 3.96
320 321 2.871133 CCACATCATCACACAACATGC 58.129 47.619 0.00 0.00 0.00 4.06
321 322 2.229302 TGCCACATCATCACACAACATG 59.771 45.455 0.00 0.00 0.00 3.21
322 323 2.516906 TGCCACATCATCACACAACAT 58.483 42.857 0.00 0.00 0.00 2.71
323 324 1.978454 TGCCACATCATCACACAACA 58.022 45.000 0.00 0.00 0.00 3.33
324 325 2.871133 CATGCCACATCATCACACAAC 58.129 47.619 0.00 0.00 0.00 3.32
325 326 1.202817 GCATGCCACATCATCACACAA 59.797 47.619 6.36 0.00 0.00 3.33
326 327 0.812549 GCATGCCACATCATCACACA 59.187 50.000 6.36 0.00 0.00 3.72
327 328 1.100510 AGCATGCCACATCATCACAC 58.899 50.000 15.66 0.00 0.00 3.82
328 329 1.474879 CAAGCATGCCACATCATCACA 59.525 47.619 15.66 0.00 0.00 3.58
329 330 2.203800 CAAGCATGCCACATCATCAC 57.796 50.000 15.66 0.00 0.00 3.06
342 343 5.651139 ACTATTTCTCTCAACATGCAAGCAT 59.349 36.000 0.86 0.86 37.08 3.79
343 344 5.005740 ACTATTTCTCTCAACATGCAAGCA 58.994 37.500 0.00 0.00 0.00 3.91
344 345 5.557891 ACTATTTCTCTCAACATGCAAGC 57.442 39.130 0.00 0.00 0.00 4.01
345 346 8.173775 CACTAACTATTTCTCTCAACATGCAAG 58.826 37.037 0.00 0.00 0.00 4.01
346 347 7.119699 CCACTAACTATTTCTCTCAACATGCAA 59.880 37.037 0.00 0.00 0.00 4.08
347 348 6.595326 CCACTAACTATTTCTCTCAACATGCA 59.405 38.462 0.00 0.00 0.00 3.96
348 349 6.037610 CCCACTAACTATTTCTCTCAACATGC 59.962 42.308 0.00 0.00 0.00 4.06
349 350 6.540189 CCCCACTAACTATTTCTCTCAACATG 59.460 42.308 0.00 0.00 0.00 3.21
350 351 6.353082 CCCCCACTAACTATTTCTCTCAACAT 60.353 42.308 0.00 0.00 0.00 2.71
351 352 5.045869 CCCCCACTAACTATTTCTCTCAACA 60.046 44.000 0.00 0.00 0.00 3.33
352 353 5.429130 CCCCCACTAACTATTTCTCTCAAC 58.571 45.833 0.00 0.00 0.00 3.18
353 354 4.080526 GCCCCCACTAACTATTTCTCTCAA 60.081 45.833 0.00 0.00 0.00 3.02
354 355 3.454812 GCCCCCACTAACTATTTCTCTCA 59.545 47.826 0.00 0.00 0.00 3.27
355 356 3.712218 AGCCCCCACTAACTATTTCTCTC 59.288 47.826 0.00 0.00 0.00 3.20
356 357 3.737263 AGCCCCCACTAACTATTTCTCT 58.263 45.455 0.00 0.00 0.00 3.10
357 358 4.503469 GCTAGCCCCCACTAACTATTTCTC 60.503 50.000 2.29 0.00 0.00 2.87
358 359 3.391626 GCTAGCCCCCACTAACTATTTCT 59.608 47.826 2.29 0.00 0.00 2.52
359 360 3.391626 AGCTAGCCCCCACTAACTATTTC 59.608 47.826 12.13 0.00 0.00 2.17
360 361 3.394645 AGCTAGCCCCCACTAACTATTT 58.605 45.455 12.13 0.00 0.00 1.40
361 362 3.061909 AGCTAGCCCCCACTAACTATT 57.938 47.619 12.13 0.00 0.00 1.73
362 363 2.797285 AGCTAGCCCCCACTAACTAT 57.203 50.000 12.13 0.00 0.00 2.12
363 364 3.917324 ATAGCTAGCCCCCACTAACTA 57.083 47.619 12.13 0.00 0.00 2.24
364 365 2.797285 ATAGCTAGCCCCCACTAACT 57.203 50.000 12.13 0.00 0.00 2.24
365 366 3.859061 AAATAGCTAGCCCCCACTAAC 57.141 47.619 12.13 0.00 0.00 2.34
366 367 4.591924 GTCTAAATAGCTAGCCCCCACTAA 59.408 45.833 12.13 0.00 0.00 2.24
367 368 4.158015 GTCTAAATAGCTAGCCCCCACTA 58.842 47.826 12.13 0.00 0.00 2.74
368 369 2.973406 GTCTAAATAGCTAGCCCCCACT 59.027 50.000 12.13 0.00 0.00 4.00
369 370 2.704065 TGTCTAAATAGCTAGCCCCCAC 59.296 50.000 12.13 0.02 0.00 4.61
370 371 2.704065 GTGTCTAAATAGCTAGCCCCCA 59.296 50.000 12.13 0.00 0.00 4.96
371 372 2.038689 GGTGTCTAAATAGCTAGCCCCC 59.961 54.545 12.13 0.00 0.00 5.40
372 373 2.704065 TGGTGTCTAAATAGCTAGCCCC 59.296 50.000 12.13 0.00 0.00 5.80
373 374 4.319177 CATGGTGTCTAAATAGCTAGCCC 58.681 47.826 12.13 1.47 0.00 5.19
374 375 4.202367 ACCATGGTGTCTAAATAGCTAGCC 60.202 45.833 18.99 0.00 0.00 3.93
375 376 4.752101 CACCATGGTGTCTAAATAGCTAGC 59.248 45.833 32.94 6.62 40.91 3.42
376 377 6.161855 TCACCATGGTGTCTAAATAGCTAG 57.838 41.667 37.49 13.00 45.55 3.42
377 378 6.553953 TTCACCATGGTGTCTAAATAGCTA 57.446 37.500 37.49 16.24 45.55 3.32
378 379 5.435686 TTCACCATGGTGTCTAAATAGCT 57.564 39.130 37.49 0.45 45.55 3.32
379 380 5.506317 GCATTCACCATGGTGTCTAAATAGC 60.506 44.000 37.49 27.66 45.55 2.97
380 381 5.824624 AGCATTCACCATGGTGTCTAAATAG 59.175 40.000 37.49 23.91 42.29 1.73
381 382 5.754782 AGCATTCACCATGGTGTCTAAATA 58.245 37.500 37.49 18.85 42.29 1.40
382 383 4.603131 AGCATTCACCATGGTGTCTAAAT 58.397 39.130 37.49 27.73 42.29 1.40
383 384 4.032960 AGCATTCACCATGGTGTCTAAA 57.967 40.909 37.49 26.89 42.29 1.85
384 385 3.719268 AGCATTCACCATGGTGTCTAA 57.281 42.857 37.49 27.22 42.29 2.10
385 386 3.719268 AAGCATTCACCATGGTGTCTA 57.281 42.857 37.49 25.90 43.13 2.59
386 387 2.592102 AAGCATTCACCATGGTGTCT 57.408 45.000 37.49 26.93 43.13 3.41
387 388 3.002656 CGATAAGCATTCACCATGGTGTC 59.997 47.826 37.49 25.47 43.13 3.67
388 389 2.945008 CGATAAGCATTCACCATGGTGT 59.055 45.455 37.49 23.21 43.13 4.16
395 396 4.574828 ACAATACCACGATAAGCATTCACC 59.425 41.667 0.00 0.00 0.00 4.02
579 590 1.774254 TGATGTCTGTTGGAGTTGGGT 59.226 47.619 0.00 0.00 0.00 4.51
616 627 3.842007 AGCTTCCATCTTCCAGATCAG 57.158 47.619 0.00 0.00 31.32 2.90
642 653 2.770232 ACGGAAGGGGTAGTCCATAAAG 59.230 50.000 0.00 0.00 37.22 1.85
658 669 4.342951 ACGATCTTACATTATGGGACGGAA 59.657 41.667 0.00 0.00 0.00 4.30
726 737 2.307768 TGCTAGAACATACTCCCTCCG 58.692 52.381 0.00 0.00 0.00 4.63
730 741 4.040461 TGGCTATTGCTAGAACATACTCCC 59.960 45.833 0.00 0.00 39.59 4.30
756 767 3.618690 AGACTAAGCAGAACATGGACC 57.381 47.619 0.00 0.00 0.00 4.46
919 930 3.794564 GCTACAAACCAAAAAGTGAACCG 59.205 43.478 0.00 0.00 0.00 4.44
928 939 3.295973 AGGCTTCAGCTACAAACCAAAA 58.704 40.909 0.00 0.00 41.70 2.44
947 958 2.026636 CCTCTACCCTCTAGGATCGAGG 60.027 59.091 7.89 7.89 46.11 4.63
951 962 2.982339 TGCCTCTACCCTCTAGGATC 57.018 55.000 0.00 0.00 39.89 3.36
1020 1032 3.632145 GGAAAACAGCCTTCAGAACTTCA 59.368 43.478 0.00 0.00 0.00 3.02
1164 1176 1.131638 TTGTGTCAGAAGGAGGCTGT 58.868 50.000 0.00 0.00 34.98 4.40
1518 1530 5.783654 GTCAATGTAATCAAAACTCGACGTG 59.216 40.000 0.00 0.00 0.00 4.49
1884 1897 7.392113 ACCAAATCATGAACGGTATAGAAAACA 59.608 33.333 11.27 0.00 0.00 2.83
1934 1947 0.040067 GCCAAAAGGCAGTCTTCACG 60.040 55.000 0.84 0.00 33.94 4.35
1976 1990 7.829725 TGTTGATTTAGCACAAGCAATTATCT 58.170 30.769 2.39 0.00 45.49 1.98
2052 2066 4.815846 GCACCAATGAAGAATTGTTTGGTT 59.184 37.500 7.30 0.00 43.49 3.67
2053 2067 4.141756 TGCACCAATGAAGAATTGTTTGGT 60.142 37.500 4.72 4.72 45.55 3.67
2056 2070 6.289834 TGAATGCACCAATGAAGAATTGTTT 58.710 32.000 0.00 0.00 43.66 2.83
2058 2072 5.471556 TGAATGCACCAATGAAGAATTGT 57.528 34.783 0.00 0.00 43.66 2.71
2061 2075 7.989416 AAATTTGAATGCACCAATGAAGAAT 57.011 28.000 4.45 0.00 0.00 2.40
2064 2078 8.537049 TCTAAAATTTGAATGCACCAATGAAG 57.463 30.769 4.45 0.73 0.00 3.02
2255 2310 3.680490 TCGCACACTCCCAAATTTGATA 58.320 40.909 19.86 6.05 0.00 2.15
2332 2391 4.300189 TCCAAATGTGTGAACGAAAAGG 57.700 40.909 0.00 0.00 0.00 3.11
2375 2434 5.527951 TGAAAAATGTGTGCATGATGCTTTT 59.472 32.000 19.19 14.55 45.31 2.27
2421 2480 7.436933 TGGTTGAATGTGCATAATGTTTTGTA 58.563 30.769 0.00 0.00 0.00 2.41
2479 2542 1.686355 AAGACGGTGCAAACAATGGA 58.314 45.000 0.00 0.00 0.00 3.41
2485 2548 1.001706 GGAGGAAAAGACGGTGCAAAC 60.002 52.381 0.00 0.00 0.00 2.93
2533 2596 5.884792 AGGTCAAATTTGTCAATTTTGCCAA 59.115 32.000 26.52 13.60 40.09 4.52
2536 2599 7.387397 TCCATAGGTCAAATTTGTCAATTTTGC 59.613 33.333 20.61 16.62 40.09 3.68
2537 2600 8.711457 GTCCATAGGTCAAATTTGTCAATTTTG 58.289 33.333 17.47 19.85 40.09 2.44
2538 2601 7.598493 CGTCCATAGGTCAAATTTGTCAATTTT 59.402 33.333 17.47 0.59 40.09 1.82
2539 2602 7.040062 TCGTCCATAGGTCAAATTTGTCAATTT 60.040 33.333 17.47 2.98 42.37 1.82
2540 2603 6.432783 TCGTCCATAGGTCAAATTTGTCAATT 59.567 34.615 17.47 5.14 33.72 2.32
2541 2604 5.943416 TCGTCCATAGGTCAAATTTGTCAAT 59.057 36.000 17.47 7.25 0.00 2.57
2542 2605 5.309638 TCGTCCATAGGTCAAATTTGTCAA 58.690 37.500 17.47 5.31 0.00 3.18
2543 2606 4.900684 TCGTCCATAGGTCAAATTTGTCA 58.099 39.130 17.47 0.00 0.00 3.58
2544 2607 5.873179 TTCGTCCATAGGTCAAATTTGTC 57.127 39.130 17.47 12.07 0.00 3.18
2545 2608 6.432783 TGATTTCGTCCATAGGTCAAATTTGT 59.567 34.615 17.47 1.67 0.00 2.83
2546 2609 6.851609 TGATTTCGTCCATAGGTCAAATTTG 58.148 36.000 12.15 12.15 0.00 2.32
2547 2610 7.461182 TTGATTTCGTCCATAGGTCAAATTT 57.539 32.000 0.00 0.00 0.00 1.82
2548 2611 7.461182 TTTGATTTCGTCCATAGGTCAAATT 57.539 32.000 0.00 0.00 31.46 1.82
2549 2612 7.339212 TGATTTGATTTCGTCCATAGGTCAAAT 59.661 33.333 9.41 9.41 43.48 2.32
2550 2613 6.657117 TGATTTGATTTCGTCCATAGGTCAAA 59.343 34.615 0.00 0.00 38.14 2.69
2551 2614 6.093495 GTGATTTGATTTCGTCCATAGGTCAA 59.907 38.462 0.00 0.00 0.00 3.18
2552 2615 5.584649 GTGATTTGATTTCGTCCATAGGTCA 59.415 40.000 0.00 0.00 0.00 4.02
2553 2616 5.584649 TGTGATTTGATTTCGTCCATAGGTC 59.415 40.000 0.00 0.00 0.00 3.85
2554 2617 5.496556 TGTGATTTGATTTCGTCCATAGGT 58.503 37.500 0.00 0.00 0.00 3.08
2555 2618 6.435430 TTGTGATTTGATTTCGTCCATAGG 57.565 37.500 0.00 0.00 0.00 2.57
2556 2619 8.915871 ATTTTGTGATTTGATTTCGTCCATAG 57.084 30.769 0.00 0.00 0.00 2.23
2558 2621 9.703892 TTTATTTTGTGATTTGATTTCGTCCAT 57.296 25.926 0.00 0.00 0.00 3.41
2559 2622 8.973378 GTTTATTTTGTGATTTGATTTCGTCCA 58.027 29.630 0.00 0.00 0.00 4.02
2560 2623 9.191995 AGTTTATTTTGTGATTTGATTTCGTCC 57.808 29.630 0.00 0.00 0.00 4.79
2567 2630 9.874205 CATGGGTAGTTTATTTTGTGATTTGAT 57.126 29.630 0.00 0.00 0.00 2.57
2568 2631 9.083422 TCATGGGTAGTTTATTTTGTGATTTGA 57.917 29.630 0.00 0.00 0.00 2.69
2569 2632 9.703892 TTCATGGGTAGTTTATTTTGTGATTTG 57.296 29.630 0.00 0.00 0.00 2.32
2571 2634 9.705290 GTTTCATGGGTAGTTTATTTTGTGATT 57.295 29.630 0.00 0.00 0.00 2.57
2572 2635 9.088987 AGTTTCATGGGTAGTTTATTTTGTGAT 57.911 29.630 0.00 0.00 0.00 3.06
2573 2636 8.472007 AGTTTCATGGGTAGTTTATTTTGTGA 57.528 30.769 0.00 0.00 0.00 3.58
2592 2655 3.186409 GTCAGCAGCGTGAAATAGTTTCA 59.814 43.478 1.24 1.24 46.68 2.69
2593 2656 3.424962 GGTCAGCAGCGTGAAATAGTTTC 60.425 47.826 0.00 0.00 40.08 2.78
2594 2657 2.484264 GGTCAGCAGCGTGAAATAGTTT 59.516 45.455 0.00 0.00 0.00 2.66
2595 2658 2.076863 GGTCAGCAGCGTGAAATAGTT 58.923 47.619 0.00 0.00 0.00 2.24
2596 2659 1.276421 AGGTCAGCAGCGTGAAATAGT 59.724 47.619 0.00 0.00 0.00 2.12
2597 2660 2.015736 AGGTCAGCAGCGTGAAATAG 57.984 50.000 0.00 0.00 0.00 1.73
2598 2661 2.472695 AAGGTCAGCAGCGTGAAATA 57.527 45.000 0.00 0.00 0.00 1.40
2599 2662 1.609208 AAAGGTCAGCAGCGTGAAAT 58.391 45.000 0.00 0.00 0.00 2.17
2600 2663 1.388547 AAAAGGTCAGCAGCGTGAAA 58.611 45.000 0.00 0.00 0.00 2.69
2601 2664 1.388547 AAAAAGGTCAGCAGCGTGAA 58.611 45.000 0.00 0.00 0.00 3.18
2602 2665 2.248280 TAAAAAGGTCAGCAGCGTGA 57.752 45.000 0.00 0.00 0.00 4.35
2603 2666 2.226437 ACATAAAAAGGTCAGCAGCGTG 59.774 45.455 0.00 0.00 0.00 5.34
2604 2667 2.226437 CACATAAAAAGGTCAGCAGCGT 59.774 45.455 0.00 0.00 0.00 5.07
2605 2668 2.483877 TCACATAAAAAGGTCAGCAGCG 59.516 45.455 0.00 0.00 0.00 5.18
2606 2669 3.667960 CGTCACATAAAAAGGTCAGCAGC 60.668 47.826 0.00 0.00 0.00 5.25
2607 2670 3.667960 GCGTCACATAAAAAGGTCAGCAG 60.668 47.826 0.00 0.00 0.00 4.24
2608 2671 2.225491 GCGTCACATAAAAAGGTCAGCA 59.775 45.455 0.00 0.00 0.00 4.41
2609 2672 2.414161 GGCGTCACATAAAAAGGTCAGC 60.414 50.000 0.00 0.00 0.00 4.26
2610 2673 2.161609 GGGCGTCACATAAAAAGGTCAG 59.838 50.000 0.00 0.00 0.00 3.51
2611 2674 2.156098 GGGCGTCACATAAAAAGGTCA 58.844 47.619 0.00 0.00 0.00 4.02
2612 2675 1.129811 CGGGCGTCACATAAAAAGGTC 59.870 52.381 0.00 0.00 0.00 3.85
2613 2676 1.161843 CGGGCGTCACATAAAAAGGT 58.838 50.000 0.00 0.00 0.00 3.50
2614 2677 1.129811 GTCGGGCGTCACATAAAAAGG 59.870 52.381 0.00 0.00 0.00 3.11
2615 2678 1.801771 TGTCGGGCGTCACATAAAAAG 59.198 47.619 0.00 0.00 0.00 2.27
2616 2679 1.880271 TGTCGGGCGTCACATAAAAA 58.120 45.000 0.00 0.00 0.00 1.94
2617 2680 2.102070 ATGTCGGGCGTCACATAAAA 57.898 45.000 0.00 0.00 31.20 1.52
2618 2681 2.963548 TATGTCGGGCGTCACATAAA 57.036 45.000 0.00 0.00 33.46 1.40
2619 2682 2.963548 TTATGTCGGGCGTCACATAA 57.036 45.000 8.41 8.41 41.22 1.90
2620 2683 2.427812 TCTTTATGTCGGGCGTCACATA 59.572 45.455 0.00 0.00 34.92 2.29
2621 2684 1.206132 TCTTTATGTCGGGCGTCACAT 59.794 47.619 0.00 0.00 37.08 3.21
2622 2685 0.604073 TCTTTATGTCGGGCGTCACA 59.396 50.000 0.00 0.00 0.00 3.58
2623 2686 0.997196 GTCTTTATGTCGGGCGTCAC 59.003 55.000 0.00 0.00 0.00 3.67
2624 2687 0.457166 CGTCTTTATGTCGGGCGTCA 60.457 55.000 0.00 0.00 0.00 4.35
2625 2688 0.457337 ACGTCTTTATGTCGGGCGTC 60.457 55.000 0.00 0.00 0.00 5.19
2626 2689 0.457337 GACGTCTTTATGTCGGGCGT 60.457 55.000 8.70 0.00 32.16 5.68
2627 2690 0.457166 TGACGTCTTTATGTCGGGCG 60.457 55.000 17.92 0.00 43.45 6.13
2628 2691 0.997196 GTGACGTCTTTATGTCGGGC 59.003 55.000 17.92 0.00 43.45 6.13
2629 2692 1.990563 GTGTGACGTCTTTATGTCGGG 59.009 52.381 17.92 0.00 43.45 5.14
2630 2693 2.942710 AGTGTGACGTCTTTATGTCGG 58.057 47.619 17.92 0.00 43.45 4.79
2631 2694 4.320164 GTGTAGTGTGACGTCTTTATGTCG 59.680 45.833 17.92 0.00 43.45 4.35
2632 2695 5.342525 CAGTGTAGTGTGACGTCTTTATGTC 59.657 44.000 17.92 3.02 41.30 3.06
2633 2696 5.220381 CAGTGTAGTGTGACGTCTTTATGT 58.780 41.667 17.92 0.00 0.00 2.29
2634 2697 5.220381 ACAGTGTAGTGTGACGTCTTTATG 58.780 41.667 17.92 5.89 0.00 1.90
2635 2698 5.449107 ACAGTGTAGTGTGACGTCTTTAT 57.551 39.130 17.92 3.22 0.00 1.40
2636 2699 4.906065 ACAGTGTAGTGTGACGTCTTTA 57.094 40.909 17.92 0.00 0.00 1.85
2637 2700 3.795623 ACAGTGTAGTGTGACGTCTTT 57.204 42.857 17.92 2.20 0.00 2.52
2646 2709 1.157870 GGCGTTGCACAGTGTAGTGT 61.158 55.000 1.61 0.00 41.52 3.55
2647 2710 0.880278 AGGCGTTGCACAGTGTAGTG 60.880 55.000 1.61 0.00 42.37 2.74
2648 2711 0.600255 GAGGCGTTGCACAGTGTAGT 60.600 55.000 1.61 0.00 0.00 2.73
2649 2712 0.599991 TGAGGCGTTGCACAGTGTAG 60.600 55.000 1.61 0.00 0.00 2.74
2650 2713 0.878523 GTGAGGCGTTGCACAGTGTA 60.879 55.000 1.61 0.00 35.19 2.90
2651 2714 2.180204 GTGAGGCGTTGCACAGTGT 61.180 57.895 1.61 0.00 35.19 3.55
2652 2715 2.179547 TGTGAGGCGTTGCACAGTG 61.180 57.895 0.00 0.00 39.86 3.66
2653 2716 2.189257 TGTGAGGCGTTGCACAGT 59.811 55.556 0.00 0.00 39.86 3.55
2655 2718 0.320050 TATCTGTGAGGCGTTGCACA 59.680 50.000 0.00 0.00 42.25 4.57
2656 2719 1.328680 CATATCTGTGAGGCGTTGCAC 59.671 52.381 0.00 0.00 35.63 4.57
2657 2720 1.655484 CATATCTGTGAGGCGTTGCA 58.345 50.000 0.00 0.00 0.00 4.08
2658 2721 0.305922 GCATATCTGTGAGGCGTTGC 59.694 55.000 0.00 0.00 0.00 4.17
2659 2722 0.578683 CGCATATCTGTGAGGCGTTG 59.421 55.000 0.00 0.00 42.51 4.10
2660 2723 2.977700 CGCATATCTGTGAGGCGTT 58.022 52.632 0.00 0.00 42.51 4.84
2661 2724 4.738198 CGCATATCTGTGAGGCGT 57.262 55.556 0.00 0.00 42.51 5.68
2663 2726 1.269778 TGTAGCGCATATCTGTGAGGC 60.270 52.381 11.47 0.00 34.71 4.70
2664 2727 2.223805 TGTGTAGCGCATATCTGTGAGG 60.224 50.000 11.47 0.00 34.71 3.86
2665 2728 2.791560 GTGTGTAGCGCATATCTGTGAG 59.208 50.000 11.47 0.00 34.71 3.51
2666 2729 2.481276 GGTGTGTAGCGCATATCTGTGA 60.481 50.000 11.47 0.00 34.71 3.58
2667 2730 1.860950 GGTGTGTAGCGCATATCTGTG 59.139 52.381 11.47 0.00 35.92 3.66
2668 2731 1.757118 AGGTGTGTAGCGCATATCTGT 59.243 47.619 11.47 0.00 28.00 3.41
2669 2732 2.130395 CAGGTGTGTAGCGCATATCTG 58.870 52.381 11.47 0.00 40.25 2.90
2670 2733 1.069204 CCAGGTGTGTAGCGCATATCT 59.931 52.381 11.47 0.00 29.12 1.98
2671 2734 1.502231 CCAGGTGTGTAGCGCATATC 58.498 55.000 11.47 0.00 0.00 1.63
2672 2735 0.106708 CCCAGGTGTGTAGCGCATAT 59.893 55.000 11.47 0.00 0.00 1.78
2673 2736 1.520192 CCCAGGTGTGTAGCGCATA 59.480 57.895 11.47 0.00 0.00 3.14
2674 2737 2.268920 CCCAGGTGTGTAGCGCAT 59.731 61.111 11.47 0.00 0.00 4.73
2675 2738 4.697756 GCCCAGGTGTGTAGCGCA 62.698 66.667 11.47 0.00 0.00 6.09
2676 2739 4.697756 TGCCCAGGTGTGTAGCGC 62.698 66.667 0.00 0.00 0.00 5.92
2677 2740 2.434884 CTGCCCAGGTGTGTAGCG 60.435 66.667 0.00 0.00 0.00 4.26
2678 2741 2.747855 GCTGCCCAGGTGTGTAGC 60.748 66.667 0.00 0.00 0.00 3.58
2679 2742 2.434884 CGCTGCCCAGGTGTGTAG 60.435 66.667 0.00 0.00 0.00 2.74
2680 2743 3.234630 GACGCTGCCCAGGTGTGTA 62.235 63.158 0.00 0.00 0.00 2.90
2681 2744 4.626081 GACGCTGCCCAGGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
2690 2753 3.869272 CAAGGATGCGACGCTGCC 61.869 66.667 22.08 20.55 0.00 4.85
2691 2754 3.121030 ACAAGGATGCGACGCTGC 61.121 61.111 22.08 12.38 0.00 5.25
2692 2755 1.086067 ATCACAAGGATGCGACGCTG 61.086 55.000 22.08 12.79 34.06 5.18
2693 2756 0.807667 GATCACAAGGATGCGACGCT 60.808 55.000 22.08 6.44 36.00 5.07
2694 2757 1.638467 GATCACAAGGATGCGACGC 59.362 57.895 14.19 14.19 36.00 5.19
2695 2758 2.301505 GGATCACAAGGATGCGACG 58.698 57.895 0.00 0.00 36.00 5.12
2699 2762 4.376340 AATTTTCGGATCACAAGGATGC 57.624 40.909 0.00 0.00 40.66 3.91
2700 2763 9.669353 CTTAATAATTTTCGGATCACAAGGATG 57.331 33.333 0.00 0.00 36.00 3.51
2701 2764 9.408648 ACTTAATAATTTTCGGATCACAAGGAT 57.591 29.630 0.00 0.00 39.53 3.24
2702 2765 8.801882 ACTTAATAATTTTCGGATCACAAGGA 57.198 30.769 0.00 0.00 0.00 3.36
2703 2766 8.673711 TGACTTAATAATTTTCGGATCACAAGG 58.326 33.333 0.00 0.00 0.00 3.61
2704 2767 9.708222 CTGACTTAATAATTTTCGGATCACAAG 57.292 33.333 0.00 0.00 0.00 3.16
2705 2768 9.226606 ACTGACTTAATAATTTTCGGATCACAA 57.773 29.630 0.00 0.00 0.00 3.33
2706 2769 8.664798 CACTGACTTAATAATTTTCGGATCACA 58.335 33.333 0.00 0.00 0.00 3.58
2707 2770 8.665685 ACACTGACTTAATAATTTTCGGATCAC 58.334 33.333 0.00 0.00 0.00 3.06
2708 2771 8.664798 CACACTGACTTAATAATTTTCGGATCA 58.335 33.333 0.00 0.00 0.00 2.92
2709 2772 7.640240 GCACACTGACTTAATAATTTTCGGATC 59.360 37.037 0.00 0.00 0.00 3.36
2710 2773 7.120579 TGCACACTGACTTAATAATTTTCGGAT 59.879 33.333 0.00 0.00 0.00 4.18
2711 2774 6.428465 TGCACACTGACTTAATAATTTTCGGA 59.572 34.615 0.00 0.00 0.00 4.55
2712 2775 6.607689 TGCACACTGACTTAATAATTTTCGG 58.392 36.000 0.00 0.00 0.00 4.30
2713 2776 6.249260 GCTGCACACTGACTTAATAATTTTCG 59.751 38.462 0.00 0.00 0.00 3.46
2714 2777 6.249260 CGCTGCACACTGACTTAATAATTTTC 59.751 38.462 0.00 0.00 0.00 2.29
2715 2778 6.086222 CGCTGCACACTGACTTAATAATTTT 58.914 36.000 0.00 0.00 0.00 1.82
2716 2779 5.631026 CGCTGCACACTGACTTAATAATTT 58.369 37.500 0.00 0.00 0.00 1.82
2717 2780 4.437390 GCGCTGCACACTGACTTAATAATT 60.437 41.667 0.00 0.00 0.00 1.40
2718 2781 3.063997 GCGCTGCACACTGACTTAATAAT 59.936 43.478 0.00 0.00 0.00 1.28
2719 2782 2.415168 GCGCTGCACACTGACTTAATAA 59.585 45.455 0.00 0.00 0.00 1.40
2720 2783 1.999735 GCGCTGCACACTGACTTAATA 59.000 47.619 0.00 0.00 0.00 0.98
2721 2784 0.798776 GCGCTGCACACTGACTTAAT 59.201 50.000 0.00 0.00 0.00 1.40
2722 2785 1.227999 GGCGCTGCACACTGACTTAA 61.228 55.000 7.64 0.00 0.00 1.85
2723 2786 1.667830 GGCGCTGCACACTGACTTA 60.668 57.895 7.64 0.00 0.00 2.24
2724 2787 2.974698 GGCGCTGCACACTGACTT 60.975 61.111 7.64 0.00 0.00 3.01
2725 2788 3.933722 AGGCGCTGCACACTGACT 61.934 61.111 7.64 0.00 0.00 3.41
2726 2789 3.720193 CAGGCGCTGCACACTGAC 61.720 66.667 7.64 0.00 32.86 3.51
2727 2790 3.871248 CTCAGGCGCTGCACACTGA 62.871 63.158 7.64 9.54 37.61 3.41
2728 2791 3.420606 CTCAGGCGCTGCACACTG 61.421 66.667 7.64 4.89 0.00 3.66
2729 2792 3.586461 CTCTCAGGCGCTGCACACT 62.586 63.158 7.64 0.00 0.00 3.55
2730 2793 2.849120 ATCTCTCAGGCGCTGCACAC 62.849 60.000 7.64 0.00 0.00 3.82
2731 2794 1.322538 TATCTCTCAGGCGCTGCACA 61.323 55.000 7.64 0.00 0.00 4.57
2732 2795 0.597118 CTATCTCTCAGGCGCTGCAC 60.597 60.000 7.64 0.00 0.00 4.57
2733 2796 1.738432 CTATCTCTCAGGCGCTGCA 59.262 57.895 7.64 0.00 0.00 4.41
2734 2797 1.006337 CCTATCTCTCAGGCGCTGC 60.006 63.158 7.64 0.00 0.00 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.