Multiple sequence alignment - TraesCS2A01G297000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G297000 chr2A 100.000 2528 0 0 1 2528 511075290 511077817 0.000000e+00 4669.0
1 TraesCS2A01G297000 chr2A 86.395 147 19 1 1 146 161800510 161800364 2.600000e-35 159.0
2 TraesCS2A01G297000 chr2A 76.316 342 49 22 1110 1444 171609456 171609772 1.210000e-33 154.0
3 TraesCS2A01G297000 chr2B 91.777 1812 70 35 226 2015 448694227 448695981 0.000000e+00 2447.0
4 TraesCS2A01G297000 chr2B 77.419 341 47 21 1110 1444 216965367 216965051 2.580000e-40 176.0
5 TraesCS2A01G297000 chr2B 81.921 177 28 4 29 203 588738134 588737960 2.030000e-31 147.0
6 TraesCS2A01G297000 chr2D 89.652 1237 90 23 1019 2249 377122097 377123301 0.000000e+00 1541.0
7 TraesCS2A01G297000 chr2D 89.353 742 27 15 202 931 377120962 377121663 0.000000e+00 885.0
8 TraesCS2A01G297000 chr2D 88.963 299 26 5 2233 2528 414994983 414995277 1.850000e-96 363.0
9 TraesCS2A01G297000 chr2D 88.591 298 31 3 2229 2525 587269176 587269471 2.390000e-95 359.0
10 TraesCS2A01G297000 chr2D 76.833 341 49 21 1110 1444 160211464 160211148 5.590000e-37 165.0
11 TraesCS2A01G297000 chr2D 82.955 176 28 2 32 206 376945065 376944891 9.360000e-35 158.0
12 TraesCS2A01G297000 chr3A 89.369 301 30 2 2229 2528 425283186 425282887 6.600000e-101 377.0
13 TraesCS2A01G297000 chr3A 88.889 297 29 3 2233 2526 127169680 127169975 1.850000e-96 363.0
14 TraesCS2A01G297000 chr1B 89.492 295 29 2 2235 2528 189706972 189706679 3.070000e-99 372.0
15 TraesCS2A01G297000 chr1B 88.449 303 31 3 2229 2528 68055000 68054699 1.850000e-96 363.0
16 TraesCS2A01G297000 chr6A 89.226 297 29 3 2233 2527 444708581 444708876 3.970000e-98 368.0
17 TraesCS2A01G297000 chr6A 88.079 302 34 2 2229 2528 596755926 596756227 8.600000e-95 357.0
18 TraesCS2A01G297000 chr5D 88.372 301 33 2 2229 2528 458000677 458000976 6.650000e-96 361.0
19 TraesCS2A01G297000 chr5D 76.774 155 21 9 60 206 320369860 320369713 3.490000e-09 73.1
20 TraesCS2A01G297000 chr3B 83.333 174 27 2 31 203 55368110 55367938 2.600000e-35 159.0
21 TraesCS2A01G297000 chr3B 89.916 119 12 0 1 119 32947647 32947765 1.210000e-33 154.0
22 TraesCS2A01G297000 chr7B 83.974 156 22 3 56 210 18104723 18104570 2.030000e-31 147.0
23 TraesCS2A01G297000 chr7B 84.354 147 20 3 1 146 6127067 6127211 9.430000e-30 141.0
24 TraesCS2A01G297000 chr3D 87.023 131 14 2 19 146 303792223 303792353 7.290000e-31 145.0
25 TraesCS2A01G297000 chr3D 78.140 215 34 5 2 203 46465920 46465706 9.500000e-25 124.0
26 TraesCS2A01G297000 chr7D 80.460 174 32 2 31 203 512209441 512209269 5.670000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G297000 chr2A 511075290 511077817 2527 False 4669 4669 100.0000 1 2528 1 chr2A.!!$F2 2527
1 TraesCS2A01G297000 chr2B 448694227 448695981 1754 False 2447 2447 91.7770 226 2015 1 chr2B.!!$F1 1789
2 TraesCS2A01G297000 chr2D 377120962 377123301 2339 False 1213 1541 89.5025 202 2249 2 chr2D.!!$F3 2047

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.036164 TGACTGGATGGTTTGTCCGG 59.964 55.0 0.0 0.0 45.74 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2111 2503 0.817634 TTTGCGGGTCACAGTTGGAG 60.818 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.103911 CCACGCCGTCAGTTCGAC 61.104 66.667 0.00 0.00 41.62 4.20
33 34 0.997196 GTCAGTTCGACGTAATGGGC 59.003 55.000 2.16 0.00 34.19 5.36
34 35 0.457166 TCAGTTCGACGTAATGGGCG 60.457 55.000 2.16 0.00 0.00 6.13
35 36 0.734942 CAGTTCGACGTAATGGGCGT 60.735 55.000 0.00 0.00 45.86 5.68
36 37 0.734942 AGTTCGACGTAATGGGCGTG 60.735 55.000 0.00 0.00 43.04 5.34
37 38 2.095847 TTCGACGTAATGGGCGTGC 61.096 57.895 0.00 0.00 43.04 5.34
38 39 3.560278 CGACGTAATGGGCGTGCC 61.560 66.667 1.16 1.16 43.04 5.01
62 63 2.923035 CCCTCGTATCCGCCCCAT 60.923 66.667 0.00 0.00 0.00 4.00
63 64 1.608336 CCCTCGTATCCGCCCCATA 60.608 63.158 0.00 0.00 0.00 2.74
64 65 0.976073 CCCTCGTATCCGCCCCATAT 60.976 60.000 0.00 0.00 0.00 1.78
65 66 0.902531 CCTCGTATCCGCCCCATATT 59.097 55.000 0.00 0.00 0.00 1.28
66 67 1.278127 CCTCGTATCCGCCCCATATTT 59.722 52.381 0.00 0.00 0.00 1.40
67 68 2.346803 CTCGTATCCGCCCCATATTTG 58.653 52.381 0.00 0.00 0.00 2.32
68 69 1.002659 TCGTATCCGCCCCATATTTGG 59.997 52.381 0.00 0.00 43.23 3.28
82 83 2.403899 ATTTGGGCTGAATATGGGGG 57.596 50.000 0.00 0.00 0.00 5.40
115 116 3.292159 GGCGTTTGAGGGCCGTTT 61.292 61.111 0.00 0.00 39.93 3.60
116 117 2.050442 GCGTTTGAGGGCCGTTTG 60.050 61.111 0.00 0.00 0.00 2.93
117 118 2.548295 GCGTTTGAGGGCCGTTTGA 61.548 57.895 0.00 0.00 0.00 2.69
118 119 1.574428 CGTTTGAGGGCCGTTTGAG 59.426 57.895 0.00 0.00 0.00 3.02
119 120 0.882927 CGTTTGAGGGCCGTTTGAGA 60.883 55.000 0.00 0.00 0.00 3.27
120 121 0.875059 GTTTGAGGGCCGTTTGAGAG 59.125 55.000 0.00 0.00 0.00 3.20
121 122 0.250727 TTTGAGGGCCGTTTGAGAGG 60.251 55.000 0.00 0.00 0.00 3.69
122 123 1.415672 TTGAGGGCCGTTTGAGAGGT 61.416 55.000 0.00 0.00 0.00 3.85
123 124 1.079057 GAGGGCCGTTTGAGAGGTC 60.079 63.158 0.00 0.00 0.00 3.85
124 125 2.046217 GGGCCGTTTGAGAGGTCC 60.046 66.667 0.00 0.00 45.95 4.46
125 126 2.434359 GGCCGTTTGAGAGGTCCG 60.434 66.667 0.00 0.00 0.00 4.79
126 127 3.119096 GCCGTTTGAGAGGTCCGC 61.119 66.667 0.00 0.00 0.00 5.54
127 128 2.434359 CCGTTTGAGAGGTCCGCC 60.434 66.667 0.00 0.00 0.00 6.13
138 139 2.286365 AGGTCCGCCTGAATCAAAAA 57.714 45.000 0.00 0.00 45.05 1.94
157 158 5.612725 AAAAATGTGACTGGATGGTTTGT 57.387 34.783 0.00 0.00 0.00 2.83
158 159 4.853924 AAATGTGACTGGATGGTTTGTC 57.146 40.909 0.00 0.00 0.00 3.18
159 160 2.270352 TGTGACTGGATGGTTTGTCC 57.730 50.000 0.00 0.00 36.26 4.02
160 161 1.156736 GTGACTGGATGGTTTGTCCG 58.843 55.000 0.00 0.00 38.64 4.79
161 162 0.036164 TGACTGGATGGTTTGTCCGG 59.964 55.000 0.00 0.00 45.74 5.14
162 163 0.323629 GACTGGATGGTTTGTCCGGA 59.676 55.000 0.00 0.00 43.50 5.14
163 164 0.036306 ACTGGATGGTTTGTCCGGAC 59.964 55.000 28.17 28.17 43.50 4.79
164 165 0.036164 CTGGATGGTTTGTCCGGACA 59.964 55.000 33.23 33.23 43.50 4.02
165 166 0.695924 TGGATGGTTTGTCCGGACAT 59.304 50.000 36.52 22.38 41.52 3.06
166 167 1.074727 TGGATGGTTTGTCCGGACATT 59.925 47.619 36.52 19.08 41.52 2.71
167 168 2.167662 GGATGGTTTGTCCGGACATTT 58.832 47.619 36.52 19.42 41.52 2.32
168 169 2.094752 GGATGGTTTGTCCGGACATTTG 60.095 50.000 36.52 0.00 41.52 2.32
169 170 2.350057 TGGTTTGTCCGGACATTTGA 57.650 45.000 36.52 20.17 41.52 2.69
170 171 2.226330 TGGTTTGTCCGGACATTTGAG 58.774 47.619 36.52 0.00 41.52 3.02
171 172 2.158740 TGGTTTGTCCGGACATTTGAGA 60.159 45.455 36.52 18.99 41.52 3.27
172 173 2.225727 GGTTTGTCCGGACATTTGAGAC 59.774 50.000 36.52 24.36 41.52 3.36
173 174 1.790755 TTGTCCGGACATTTGAGACG 58.209 50.000 36.52 0.00 41.52 4.18
174 175 0.963225 TGTCCGGACATTTGAGACGA 59.037 50.000 33.23 6.51 36.21 4.20
175 176 1.067846 TGTCCGGACATTTGAGACGAG 60.068 52.381 33.23 0.00 36.21 4.18
176 177 1.067776 GTCCGGACATTTGAGACGAGT 60.068 52.381 29.75 0.00 0.00 4.18
177 178 1.616865 TCCGGACATTTGAGACGAGTT 59.383 47.619 0.00 0.00 0.00 3.01
178 179 2.036733 TCCGGACATTTGAGACGAGTTT 59.963 45.455 0.00 0.00 0.00 2.66
179 180 2.157668 CCGGACATTTGAGACGAGTTTG 59.842 50.000 0.00 0.00 0.00 2.93
180 181 2.157668 CGGACATTTGAGACGAGTTTGG 59.842 50.000 0.00 0.00 0.00 3.28
181 182 2.484264 GGACATTTGAGACGAGTTTGGG 59.516 50.000 0.00 0.00 0.00 4.12
182 183 3.399330 GACATTTGAGACGAGTTTGGGA 58.601 45.455 0.00 0.00 0.00 4.37
183 184 3.403038 ACATTTGAGACGAGTTTGGGAG 58.597 45.455 0.00 0.00 0.00 4.30
184 185 2.543777 TTTGAGACGAGTTTGGGAGG 57.456 50.000 0.00 0.00 0.00 4.30
185 186 1.420430 TTGAGACGAGTTTGGGAGGT 58.580 50.000 0.00 0.00 0.00 3.85
186 187 0.966920 TGAGACGAGTTTGGGAGGTC 59.033 55.000 0.00 0.00 0.00 3.85
187 188 0.246910 GAGACGAGTTTGGGAGGTCC 59.753 60.000 0.00 0.00 0.00 4.46
188 189 1.080025 GACGAGTTTGGGAGGTCCG 60.080 63.158 0.00 0.00 38.76 4.79
189 190 2.264794 CGAGTTTGGGAGGTCCGG 59.735 66.667 0.00 0.00 38.76 5.14
190 191 2.580601 CGAGTTTGGGAGGTCCGGT 61.581 63.158 0.00 0.00 38.76 5.28
191 192 1.759236 GAGTTTGGGAGGTCCGGTT 59.241 57.895 0.00 0.00 38.76 4.44
192 193 0.605589 GAGTTTGGGAGGTCCGGTTG 60.606 60.000 0.00 0.00 38.76 3.77
193 194 1.149854 GTTTGGGAGGTCCGGTTGT 59.850 57.895 0.00 0.00 38.76 3.32
194 195 0.397564 GTTTGGGAGGTCCGGTTGTA 59.602 55.000 0.00 0.00 38.76 2.41
195 196 0.688487 TTTGGGAGGTCCGGTTGTAG 59.312 55.000 0.00 0.00 38.76 2.74
196 197 0.178926 TTGGGAGGTCCGGTTGTAGA 60.179 55.000 0.00 0.00 38.76 2.59
197 198 0.042131 TGGGAGGTCCGGTTGTAGAT 59.958 55.000 0.00 0.00 38.76 1.98
198 199 0.464452 GGGAGGTCCGGTTGTAGATG 59.536 60.000 0.00 0.00 36.71 2.90
199 200 0.179081 GGAGGTCCGGTTGTAGATGC 60.179 60.000 0.00 0.00 0.00 3.91
200 201 0.824759 GAGGTCCGGTTGTAGATGCT 59.175 55.000 0.00 0.00 0.00 3.79
211 212 5.303971 GGTTGTAGATGCTCTGATGCTAAT 58.696 41.667 0.00 0.00 0.00 1.73
219 220 8.921353 AGATGCTCTGATGCTAATAATTCTTT 57.079 30.769 0.00 0.00 0.00 2.52
300 301 3.919804 CACAACAAGGAACAATAATGCGG 59.080 43.478 0.00 0.00 0.00 5.69
327 328 6.534793 GGTGTGGCATTCAAAATATTCGAAAT 59.465 34.615 0.00 0.00 0.00 2.17
345 346 2.361085 ATGGACCTGAAACCTAGGGT 57.639 50.000 14.81 2.44 39.71 4.34
436 437 6.156775 TGGTGAGTAGATTGAGATTCCATCAA 59.843 38.462 0.00 0.00 40.72 2.57
472 473 2.755655 AGAGTTGGATCGGTGTCACTAG 59.244 50.000 2.35 0.00 0.00 2.57
473 474 1.204941 AGTTGGATCGGTGTCACTAGC 59.795 52.381 2.35 0.00 0.00 3.42
474 475 0.172578 TTGGATCGGTGTCACTAGCG 59.827 55.000 2.35 0.00 42.44 4.26
477 478 2.865308 TCGGTGTCACTAGCGACG 59.135 61.111 6.42 0.00 44.49 5.12
478 479 2.874780 CGGTGTCACTAGCGACGC 60.875 66.667 13.03 13.03 43.66 5.19
480 481 2.257371 GTGTCACTAGCGACGCCA 59.743 61.111 17.79 0.72 39.91 5.69
565 566 0.761702 AACCACCGGACACCAGTAGT 60.762 55.000 9.46 0.00 0.00 2.73
566 567 1.183676 ACCACCGGACACCAGTAGTC 61.184 60.000 9.46 0.00 35.29 2.59
567 568 1.211969 CACCGGACACCAGTAGTCG 59.788 63.158 9.46 0.00 36.87 4.18
568 569 1.975407 ACCGGACACCAGTAGTCGG 60.975 63.158 9.46 0.00 39.89 4.79
569 570 1.676635 CCGGACACCAGTAGTCGGA 60.677 63.158 0.00 0.00 38.23 4.55
570 571 1.654954 CCGGACACCAGTAGTCGGAG 61.655 65.000 0.00 0.00 38.23 4.63
571 572 0.959372 CGGACACCAGTAGTCGGAGT 60.959 60.000 0.00 0.00 38.23 3.85
572 573 0.810016 GGACACCAGTAGTCGGAGTC 59.190 60.000 0.00 0.00 41.73 3.36
573 574 0.447011 GACACCAGTAGTCGGAGTCG 59.553 60.000 0.00 0.00 34.99 4.18
574 575 0.959372 ACACCAGTAGTCGGAGTCGG 60.959 60.000 0.00 0.00 36.95 4.79
597 598 1.698506 TTTGGCAGACGGAAACCAAT 58.301 45.000 3.53 0.00 41.59 3.16
610 611 0.913924 AACCAATACCACCGGTAGGG 59.086 55.000 22.05 16.71 41.83 3.53
668 669 1.527433 TATCCTCGCCGCCTCAGATG 61.527 60.000 0.00 0.00 0.00 2.90
677 678 0.388294 CGCCTCAGATGAGATGCTGA 59.612 55.000 11.44 0.00 44.74 4.26
687 688 8.379457 TCAGATGAGATGCTGAGAAAATAATG 57.621 34.615 0.00 0.00 36.31 1.90
688 689 7.041303 TCAGATGAGATGCTGAGAAAATAATGC 60.041 37.037 0.00 0.00 36.31 3.56
689 690 6.999272 AGATGAGATGCTGAGAAAATAATGCT 59.001 34.615 0.00 0.00 0.00 3.79
690 691 6.373186 TGAGATGCTGAGAAAATAATGCTG 57.627 37.500 0.00 0.00 0.00 4.41
695 696 2.023673 TGAGAAAATAATGCTGGGCCG 58.976 47.619 0.00 0.00 0.00 6.13
779 781 1.215014 TGAGCAGACGACAAGCAACG 61.215 55.000 0.00 0.00 0.00 4.10
826 840 3.474806 GTGCAATCACGAGACGGG 58.525 61.111 0.00 0.00 32.98 5.28
907 921 2.791501 TAAGTTTCCTCCGCGCCACC 62.792 60.000 0.00 0.00 0.00 4.61
995 1010 3.017442 GCTAGGAACCCAAGAAACATCC 58.983 50.000 0.00 0.00 0.00 3.51
996 1011 3.561313 GCTAGGAACCCAAGAAACATCCA 60.561 47.826 0.00 0.00 0.00 3.41
1007 1022 2.309755 AGAAACATCCAGCAATGAGGGA 59.690 45.455 1.32 0.00 34.70 4.20
1014 1029 1.022735 CAGCAATGAGGGACATGAGC 58.977 55.000 0.00 0.00 39.39 4.26
1544 1904 4.184629 CCTTAGTCAGATTCCGGTGAAAG 58.815 47.826 0.00 0.00 33.32 2.62
1574 1934 3.130516 TGTGATCTTCTTGTACTAGCCCG 59.869 47.826 0.00 0.00 0.00 6.13
1591 1951 0.243907 CCGGCCCTATCACTATGTCG 59.756 60.000 0.00 0.00 0.00 4.35
1619 1986 5.339695 CCAATGTGTACTGGTACCCCTAAAT 60.340 44.000 10.07 0.00 35.26 1.40
1620 1987 5.625568 ATGTGTACTGGTACCCCTAAATC 57.374 43.478 10.07 0.00 35.26 2.17
1621 1988 3.776417 TGTGTACTGGTACCCCTAAATCC 59.224 47.826 10.07 0.00 35.26 3.01
1622 1989 4.035814 GTGTACTGGTACCCCTAAATCCT 58.964 47.826 10.07 0.00 35.26 3.24
1623 1990 5.211201 GTGTACTGGTACCCCTAAATCCTA 58.789 45.833 10.07 0.00 35.26 2.94
1624 1991 5.069648 GTGTACTGGTACCCCTAAATCCTAC 59.930 48.000 10.07 0.00 35.26 3.18
1625 1992 4.639019 ACTGGTACCCCTAAATCCTACT 57.361 45.455 10.07 0.00 0.00 2.57
1626 1993 5.756314 ACTGGTACCCCTAAATCCTACTA 57.244 43.478 10.07 0.00 0.00 1.82
1627 1994 5.462240 ACTGGTACCCCTAAATCCTACTAC 58.538 45.833 10.07 0.00 0.00 2.73
1628 1995 5.043130 ACTGGTACCCCTAAATCCTACTACA 60.043 44.000 10.07 0.00 0.00 2.74
1629 1996 6.046917 TGGTACCCCTAAATCCTACTACAT 57.953 41.667 10.07 0.00 0.00 2.29
1719 2086 3.508845 AACCAGCAACCACTAGTGATT 57.491 42.857 24.68 11.16 0.00 2.57
1764 2131 7.873719 TTTTGTTTCTCTCAACTATTGTCCA 57.126 32.000 0.00 0.00 0.00 4.02
1783 2150 3.384789 TCCATGTTTAGACTCCATCCTCG 59.615 47.826 0.00 0.00 0.00 4.63
1795 2162 2.576191 TCCATCCTCGAATTCCCAAACT 59.424 45.455 0.00 0.00 0.00 2.66
1820 2187 9.495572 CTGATAAACTCTTCAAACTAAACTCCT 57.504 33.333 0.00 0.00 0.00 3.69
1821 2188 9.490379 TGATAAACTCTTCAAACTAAACTCCTC 57.510 33.333 0.00 0.00 0.00 3.71
1822 2189 8.850007 ATAAACTCTTCAAACTAAACTCCTCC 57.150 34.615 0.00 0.00 0.00 4.30
1835 2202 5.505173 AAACTCCTCCATCAAATTATGCG 57.495 39.130 0.00 0.00 0.00 4.73
1837 2204 3.879295 ACTCCTCCATCAAATTATGCGTG 59.121 43.478 0.00 0.00 0.00 5.34
1838 2205 2.618241 TCCTCCATCAAATTATGCGTGC 59.382 45.455 0.00 0.00 0.00 5.34
1839 2206 2.358582 CCTCCATCAAATTATGCGTGCA 59.641 45.455 0.00 0.00 0.00 4.57
1840 2207 3.549423 CCTCCATCAAATTATGCGTGCAG 60.549 47.826 0.00 0.00 0.00 4.41
1841 2208 3.016031 TCCATCAAATTATGCGTGCAGT 58.984 40.909 0.00 0.00 0.00 4.40
1844 2211 4.626604 CCATCAAATTATGCGTGCAGTTTT 59.373 37.500 0.00 0.00 0.00 2.43
1892 2265 1.880601 CTTCCGATGCTCGCATACGC 61.881 60.000 4.10 0.00 38.82 4.42
1893 2266 2.349969 TTCCGATGCTCGCATACGCT 62.350 55.000 4.10 0.00 38.82 5.07
1894 2267 1.081442 CCGATGCTCGCATACGCTA 60.081 57.895 4.10 0.00 38.82 4.26
1987 2377 7.019418 CACTAAAACTAAGGTTTATCAACGGC 58.981 38.462 0.00 0.00 43.90 5.68
2073 2465 5.629079 AAAACTCAGGCAACATAACTAGC 57.371 39.130 0.00 0.00 41.41 3.42
2074 2466 3.981071 ACTCAGGCAACATAACTAGCA 57.019 42.857 0.00 0.00 41.41 3.49
2075 2467 4.286297 ACTCAGGCAACATAACTAGCAA 57.714 40.909 0.00 0.00 41.41 3.91
2076 2468 4.003648 ACTCAGGCAACATAACTAGCAAC 58.996 43.478 0.00 0.00 41.41 4.17
2077 2469 4.256920 CTCAGGCAACATAACTAGCAACT 58.743 43.478 0.00 0.00 41.41 3.16
2078 2470 4.002982 TCAGGCAACATAACTAGCAACTG 58.997 43.478 0.00 0.00 41.41 3.16
2079 2471 3.753272 CAGGCAACATAACTAGCAACTGT 59.247 43.478 0.00 0.00 41.41 3.55
2080 2472 3.753272 AGGCAACATAACTAGCAACTGTG 59.247 43.478 0.00 0.00 41.41 3.66
2081 2473 3.502211 GGCAACATAACTAGCAACTGTGT 59.498 43.478 0.00 0.00 0.00 3.72
2082 2474 4.466828 GCAACATAACTAGCAACTGTGTG 58.533 43.478 0.00 0.00 0.00 3.82
2083 2475 4.024048 GCAACATAACTAGCAACTGTGTGT 60.024 41.667 0.00 0.00 0.00 3.72
2084 2476 5.178623 GCAACATAACTAGCAACTGTGTGTA 59.821 40.000 0.00 0.00 0.00 2.90
2085 2477 6.128282 GCAACATAACTAGCAACTGTGTGTAT 60.128 38.462 0.00 0.00 0.00 2.29
2086 2478 7.573096 GCAACATAACTAGCAACTGTGTGTATT 60.573 37.037 0.00 0.00 0.00 1.89
2087 2479 7.979444 ACATAACTAGCAACTGTGTGTATTT 57.021 32.000 0.00 0.00 0.00 1.40
2088 2480 8.391075 ACATAACTAGCAACTGTGTGTATTTT 57.609 30.769 0.00 0.00 0.00 1.82
2111 2503 0.324275 TTGGGCAAGGTTAGGGCATC 60.324 55.000 0.00 0.00 0.00 3.91
2118 2510 1.972588 AGGTTAGGGCATCTCCAACT 58.027 50.000 0.00 0.00 36.21 3.16
2135 2528 0.958822 ACTGTGACCCGCAAATTTCC 59.041 50.000 0.00 0.00 0.00 3.13
2136 2529 1.247567 CTGTGACCCGCAAATTTCCT 58.752 50.000 0.00 0.00 0.00 3.36
2138 2531 0.526211 GTGACCCGCAAATTTCCTCC 59.474 55.000 0.00 0.00 0.00 4.30
2143 2536 0.173255 CCGCAAATTTCCTCCGCATT 59.827 50.000 0.00 0.00 0.00 3.56
2148 2541 1.379527 AATTTCCTCCGCATTCGTCC 58.620 50.000 0.00 0.00 0.00 4.79
2149 2542 0.251916 ATTTCCTCCGCATTCGTCCA 59.748 50.000 0.00 0.00 0.00 4.02
2159 2552 0.108377 CATTCGTCCATGGACACGGA 60.108 55.000 37.42 26.17 44.77 4.69
2162 2555 1.218047 CGTCCATGGACACGGATGT 59.782 57.895 37.42 0.00 44.77 3.06
2172 2565 4.417641 ACGGATGTGAGAGGACGT 57.582 55.556 0.00 0.00 0.00 4.34
2189 2582 1.217244 GTCATCCAACCGTAGCCGT 59.783 57.895 0.00 0.00 0.00 5.68
2198 2591 1.985473 ACCGTAGCCGTATACATCCA 58.015 50.000 3.32 0.00 0.00 3.41
2200 2593 1.884579 CCGTAGCCGTATACATCCAGT 59.115 52.381 3.32 0.00 0.00 4.00
2201 2594 2.095364 CCGTAGCCGTATACATCCAGTC 60.095 54.545 3.32 0.00 0.00 3.51
2204 2597 4.261489 CGTAGCCGTATACATCCAGTCTTT 60.261 45.833 3.32 0.00 0.00 2.52
2207 2600 4.406003 AGCCGTATACATCCAGTCTTTCTT 59.594 41.667 3.32 0.00 0.00 2.52
2209 2602 6.097839 AGCCGTATACATCCAGTCTTTCTTAA 59.902 38.462 3.32 0.00 0.00 1.85
2212 2605 9.976511 CCGTATACATCCAGTCTTTCTTAAATA 57.023 33.333 3.32 0.00 0.00 1.40
2240 2633 4.183865 TCAAGTCTGCACGATCAAATAGG 58.816 43.478 0.00 0.00 0.00 2.57
2249 2642 1.399343 CGATCAAATAGGCGCATGCAG 60.399 52.381 19.57 11.69 45.35 4.41
2250 2643 0.313043 ATCAAATAGGCGCATGCAGC 59.687 50.000 19.57 20.53 45.35 5.25
2251 2644 1.031029 TCAAATAGGCGCATGCAGCA 61.031 50.000 27.23 14.16 46.13 4.41
2252 2645 0.868602 CAAATAGGCGCATGCAGCAC 60.869 55.000 27.23 19.16 46.13 4.40
2253 2646 1.033746 AAATAGGCGCATGCAGCACT 61.034 50.000 27.23 23.19 46.13 4.40
2254 2647 0.179048 AATAGGCGCATGCAGCACTA 60.179 50.000 27.23 24.11 46.13 2.74
2255 2648 0.602106 ATAGGCGCATGCAGCACTAG 60.602 55.000 27.23 9.04 46.13 2.57
2256 2649 1.960040 TAGGCGCATGCAGCACTAGT 61.960 55.000 27.23 13.59 46.13 2.57
2257 2650 2.401766 GGCGCATGCAGCACTAGTT 61.402 57.895 27.23 0.00 46.13 2.24
2258 2651 1.503542 GCGCATGCAGCACTAGTTT 59.496 52.632 23.37 0.00 46.13 2.66
2259 2652 0.726827 GCGCATGCAGCACTAGTTTA 59.273 50.000 23.37 0.00 46.13 2.01
2260 2653 1.130373 GCGCATGCAGCACTAGTTTAA 59.870 47.619 23.37 0.00 46.13 1.52
2261 2654 2.414029 GCGCATGCAGCACTAGTTTAAA 60.414 45.455 23.37 0.00 46.13 1.52
2262 2655 3.731867 GCGCATGCAGCACTAGTTTAAAT 60.732 43.478 23.37 0.00 46.13 1.40
2263 2656 4.414852 CGCATGCAGCACTAGTTTAAATT 58.585 39.130 19.57 0.00 46.13 1.82
2264 2657 4.858692 CGCATGCAGCACTAGTTTAAATTT 59.141 37.500 19.57 0.00 46.13 1.82
2265 2658 6.027131 CGCATGCAGCACTAGTTTAAATTTA 58.973 36.000 19.57 0.00 46.13 1.40
2266 2659 6.526325 CGCATGCAGCACTAGTTTAAATTTAA 59.474 34.615 19.57 6.54 46.13 1.52
2267 2660 7.061673 CGCATGCAGCACTAGTTTAAATTTAAA 59.938 33.333 19.57 17.45 46.13 1.52
2268 2661 8.707839 GCATGCAGCACTAGTTTAAATTTAAAA 58.292 29.630 21.81 9.31 44.79 1.52
2293 2686 8.877864 AGAAGTTCAAATATTACATCCCAACA 57.122 30.769 5.50 0.00 0.00 3.33
2294 2687 9.479549 AGAAGTTCAAATATTACATCCCAACAT 57.520 29.630 5.50 0.00 0.00 2.71
2296 2689 9.874205 AAGTTCAAATATTACATCCCAACATTG 57.126 29.630 0.00 0.00 0.00 2.82
2297 2690 9.034800 AGTTCAAATATTACATCCCAACATTGT 57.965 29.630 0.00 0.00 0.00 2.71
2298 2691 9.651913 GTTCAAATATTACATCCCAACATTGTT 57.348 29.630 0.00 0.00 0.00 2.83
2299 2692 9.868277 TTCAAATATTACATCCCAACATTGTTC 57.132 29.630 0.00 0.00 0.00 3.18
2300 2693 9.253832 TCAAATATTACATCCCAACATTGTTCT 57.746 29.630 0.00 0.00 0.00 3.01
2301 2694 9.520204 CAAATATTACATCCCAACATTGTTCTC 57.480 33.333 0.00 0.00 0.00 2.87
2302 2695 7.823745 ATATTACATCCCAACATTGTTCTCC 57.176 36.000 0.00 0.00 0.00 3.71
2303 2696 2.807676 ACATCCCAACATTGTTCTCCC 58.192 47.619 0.00 0.00 0.00 4.30
2304 2697 2.102578 CATCCCAACATTGTTCTCCCC 58.897 52.381 0.00 0.00 0.00 4.81
2305 2698 1.455822 TCCCAACATTGTTCTCCCCT 58.544 50.000 0.00 0.00 0.00 4.79
2306 2699 1.786441 TCCCAACATTGTTCTCCCCTT 59.214 47.619 0.00 0.00 0.00 3.95
2307 2700 2.178984 TCCCAACATTGTTCTCCCCTTT 59.821 45.455 0.00 0.00 0.00 3.11
2308 2701 2.562738 CCCAACATTGTTCTCCCCTTTC 59.437 50.000 0.00 0.00 0.00 2.62
2309 2702 2.228822 CCAACATTGTTCTCCCCTTTCG 59.771 50.000 0.00 0.00 0.00 3.46
2310 2703 1.534729 ACATTGTTCTCCCCTTTCGC 58.465 50.000 0.00 0.00 0.00 4.70
2311 2704 0.811281 CATTGTTCTCCCCTTTCGCC 59.189 55.000 0.00 0.00 0.00 5.54
2312 2705 0.676782 ATTGTTCTCCCCTTTCGCCG 60.677 55.000 0.00 0.00 0.00 6.46
2313 2706 3.125573 GTTCTCCCCTTTCGCCGC 61.126 66.667 0.00 0.00 0.00 6.53
2314 2707 4.404098 TTCTCCCCTTTCGCCGCC 62.404 66.667 0.00 0.00 0.00 6.13
2320 2713 4.697756 CCTTTCGCCGCCCACTGA 62.698 66.667 0.00 0.00 0.00 3.41
2321 2714 2.436646 CTTTCGCCGCCCACTGAT 60.437 61.111 0.00 0.00 0.00 2.90
2322 2715 1.153449 CTTTCGCCGCCCACTGATA 60.153 57.895 0.00 0.00 0.00 2.15
2323 2716 1.429148 CTTTCGCCGCCCACTGATAC 61.429 60.000 0.00 0.00 0.00 2.24
2324 2717 1.895020 TTTCGCCGCCCACTGATACT 61.895 55.000 0.00 0.00 0.00 2.12
2325 2718 1.895020 TTCGCCGCCCACTGATACTT 61.895 55.000 0.00 0.00 0.00 2.24
2326 2719 1.038681 TCGCCGCCCACTGATACTTA 61.039 55.000 0.00 0.00 0.00 2.24
2327 2720 0.179094 CGCCGCCCACTGATACTTAA 60.179 55.000 0.00 0.00 0.00 1.85
2328 2721 1.540363 CGCCGCCCACTGATACTTAAT 60.540 52.381 0.00 0.00 0.00 1.40
2329 2722 2.143925 GCCGCCCACTGATACTTAATC 58.856 52.381 0.00 0.00 34.93 1.75
2330 2723 2.484770 GCCGCCCACTGATACTTAATCA 60.485 50.000 0.00 0.00 42.48 2.57
2344 2737 9.113838 TGATACTTAATCAGATTTTCCTTCAGC 57.886 33.333 0.00 0.00 39.77 4.26
2345 2738 9.336171 GATACTTAATCAGATTTTCCTTCAGCT 57.664 33.333 0.00 0.00 34.46 4.24
2346 2739 7.388460 ACTTAATCAGATTTTCCTTCAGCTG 57.612 36.000 7.63 7.63 0.00 4.24
2347 2740 6.944862 ACTTAATCAGATTTTCCTTCAGCTGT 59.055 34.615 14.67 0.00 0.00 4.40
2348 2741 7.449704 ACTTAATCAGATTTTCCTTCAGCTGTT 59.550 33.333 14.67 0.00 0.00 3.16
2349 2742 5.893897 ATCAGATTTTCCTTCAGCTGTTC 57.106 39.130 14.67 0.00 0.00 3.18
2350 2743 4.717877 TCAGATTTTCCTTCAGCTGTTCA 58.282 39.130 14.67 0.00 0.00 3.18
2351 2744 5.319453 TCAGATTTTCCTTCAGCTGTTCAT 58.681 37.500 14.67 0.00 0.00 2.57
2352 2745 5.182570 TCAGATTTTCCTTCAGCTGTTCATG 59.817 40.000 14.67 0.00 0.00 3.07
2353 2746 5.182570 CAGATTTTCCTTCAGCTGTTCATGA 59.817 40.000 14.67 0.00 0.00 3.07
2354 2747 5.415077 AGATTTTCCTTCAGCTGTTCATGAG 59.585 40.000 14.67 3.68 0.00 2.90
2355 2748 3.777106 TTCCTTCAGCTGTTCATGAGT 57.223 42.857 14.67 0.00 0.00 3.41
2356 2749 3.777106 TCCTTCAGCTGTTCATGAGTT 57.223 42.857 14.67 0.00 0.00 3.01
2357 2750 3.405831 TCCTTCAGCTGTTCATGAGTTG 58.594 45.455 14.67 0.00 0.00 3.16
2358 2751 2.486982 CCTTCAGCTGTTCATGAGTTGG 59.513 50.000 14.67 0.00 0.00 3.77
2359 2752 2.936919 TCAGCTGTTCATGAGTTGGT 57.063 45.000 14.67 0.00 0.00 3.67
2360 2753 2.771089 TCAGCTGTTCATGAGTTGGTC 58.229 47.619 14.67 0.00 0.00 4.02
2361 2754 1.462283 CAGCTGTTCATGAGTTGGTCG 59.538 52.381 5.25 0.00 0.00 4.79
2362 2755 1.344438 AGCTGTTCATGAGTTGGTCGA 59.656 47.619 0.00 0.00 0.00 4.20
2363 2756 2.027745 AGCTGTTCATGAGTTGGTCGAT 60.028 45.455 0.00 0.00 0.00 3.59
2364 2757 2.094894 GCTGTTCATGAGTTGGTCGATG 59.905 50.000 0.00 0.00 0.00 3.84
2365 2758 2.076100 TGTTCATGAGTTGGTCGATGC 58.924 47.619 0.00 0.00 0.00 3.91
2366 2759 1.398390 GTTCATGAGTTGGTCGATGCC 59.602 52.381 0.00 0.00 0.00 4.40
2367 2760 0.460109 TCATGAGTTGGTCGATGCCG 60.460 55.000 0.00 0.00 37.07 5.69
2368 2761 0.460109 CATGAGTTGGTCGATGCCGA 60.460 55.000 0.00 0.00 43.35 5.54
2379 2772 3.403613 TCGATGCCGAATTTGTTGATG 57.596 42.857 0.00 0.00 42.51 3.07
2380 2773 1.847999 CGATGCCGAATTTGTTGATGC 59.152 47.619 0.00 0.00 38.22 3.91
2381 2774 2.731654 CGATGCCGAATTTGTTGATGCA 60.732 45.455 0.00 0.00 38.22 3.96
2382 2775 3.450578 GATGCCGAATTTGTTGATGCAT 58.549 40.909 0.00 0.00 40.37 3.96
2383 2776 3.316071 TGCCGAATTTGTTGATGCATT 57.684 38.095 0.00 0.00 0.00 3.56
2384 2777 3.661944 TGCCGAATTTGTTGATGCATTT 58.338 36.364 0.00 0.00 0.00 2.32
2385 2778 4.814147 TGCCGAATTTGTTGATGCATTTA 58.186 34.783 0.00 0.00 0.00 1.40
2386 2779 5.233225 TGCCGAATTTGTTGATGCATTTAA 58.767 33.333 0.00 0.00 0.00 1.52
2387 2780 5.698089 TGCCGAATTTGTTGATGCATTTAAA 59.302 32.000 0.00 1.00 0.00 1.52
2388 2781 6.370994 TGCCGAATTTGTTGATGCATTTAAAT 59.629 30.769 0.00 3.38 0.00 1.40
2389 2782 7.547019 TGCCGAATTTGTTGATGCATTTAAATA 59.453 29.630 0.00 0.00 0.00 1.40
2390 2783 8.386606 GCCGAATTTGTTGATGCATTTAAATAA 58.613 29.630 0.00 0.00 0.00 1.40
2396 2789 9.995003 TTTGTTGATGCATTTAAATAAACTCCT 57.005 25.926 0.00 0.00 0.00 3.69
2397 2790 9.638239 TTGTTGATGCATTTAAATAAACTCCTC 57.362 29.630 0.00 0.00 0.00 3.71
2398 2791 8.801299 TGTTGATGCATTTAAATAAACTCCTCA 58.199 29.630 0.00 0.00 0.00 3.86
2399 2792 9.638239 GTTGATGCATTTAAATAAACTCCTCAA 57.362 29.630 0.00 0.00 0.00 3.02
2404 2797 9.421806 TGCATTTAAATAAACTCCTCAAATGTG 57.578 29.630 0.00 0.00 35.41 3.21
2405 2798 8.872845 GCATTTAAATAAACTCCTCAAATGTGG 58.127 33.333 0.00 0.00 35.41 4.17
2406 2799 9.927668 CATTTAAATAAACTCCTCAAATGTGGT 57.072 29.630 0.00 0.00 30.84 4.16
2408 2801 9.757227 TTTAAATAAACTCCTCAAATGTGGTTG 57.243 29.630 1.80 0.25 0.00 3.77
2409 2802 5.982890 ATAAACTCCTCAAATGTGGTTGG 57.017 39.130 1.80 0.00 0.00 3.77
2410 2803 3.593442 AACTCCTCAAATGTGGTTGGA 57.407 42.857 1.80 0.00 0.00 3.53
2411 2804 3.814504 ACTCCTCAAATGTGGTTGGAT 57.185 42.857 1.80 0.00 0.00 3.41
2412 2805 4.118168 ACTCCTCAAATGTGGTTGGATT 57.882 40.909 1.80 0.00 0.00 3.01
2413 2806 4.082125 ACTCCTCAAATGTGGTTGGATTC 58.918 43.478 1.80 0.00 0.00 2.52
2414 2807 4.202609 ACTCCTCAAATGTGGTTGGATTCT 60.203 41.667 1.80 0.00 0.00 2.40
2415 2808 4.081406 TCCTCAAATGTGGTTGGATTCTG 58.919 43.478 1.80 0.00 0.00 3.02
2416 2809 3.194116 CCTCAAATGTGGTTGGATTCTGG 59.806 47.826 0.00 0.00 0.00 3.86
2417 2810 3.828451 CTCAAATGTGGTTGGATTCTGGT 59.172 43.478 0.00 0.00 0.00 4.00
2418 2811 4.222336 TCAAATGTGGTTGGATTCTGGTT 58.778 39.130 0.00 0.00 0.00 3.67
2419 2812 4.280677 TCAAATGTGGTTGGATTCTGGTTC 59.719 41.667 0.00 0.00 0.00 3.62
2420 2813 1.890876 TGTGGTTGGATTCTGGTTCG 58.109 50.000 0.00 0.00 0.00 3.95
2421 2814 1.418264 TGTGGTTGGATTCTGGTTCGA 59.582 47.619 0.00 0.00 0.00 3.71
2422 2815 2.158740 TGTGGTTGGATTCTGGTTCGAA 60.159 45.455 0.00 0.00 0.00 3.71
2423 2816 2.882137 GTGGTTGGATTCTGGTTCGAAA 59.118 45.455 0.00 0.00 0.00 3.46
2424 2817 3.058224 GTGGTTGGATTCTGGTTCGAAAG 60.058 47.826 0.00 0.00 0.00 2.62
2425 2818 3.146847 GGTTGGATTCTGGTTCGAAAGT 58.853 45.455 0.00 0.00 0.00 2.66
2426 2819 3.568430 GGTTGGATTCTGGTTCGAAAGTT 59.432 43.478 0.00 0.00 0.00 2.66
2427 2820 4.537015 GTTGGATTCTGGTTCGAAAGTTG 58.463 43.478 0.00 0.00 0.00 3.16
2428 2821 4.079980 TGGATTCTGGTTCGAAAGTTGA 57.920 40.909 0.00 0.00 0.00 3.18
2429 2822 4.651778 TGGATTCTGGTTCGAAAGTTGAT 58.348 39.130 0.00 0.00 0.00 2.57
2430 2823 5.800296 TGGATTCTGGTTCGAAAGTTGATA 58.200 37.500 0.00 0.00 0.00 2.15
2431 2824 5.874810 TGGATTCTGGTTCGAAAGTTGATAG 59.125 40.000 0.00 0.00 0.00 2.08
2432 2825 5.294552 GGATTCTGGTTCGAAAGTTGATAGG 59.705 44.000 0.00 0.00 0.00 2.57
2433 2826 5.477607 TTCTGGTTCGAAAGTTGATAGGA 57.522 39.130 0.00 0.00 0.00 2.94
2434 2827 5.677319 TCTGGTTCGAAAGTTGATAGGAT 57.323 39.130 0.00 0.00 0.00 3.24
2435 2828 5.661458 TCTGGTTCGAAAGTTGATAGGATC 58.339 41.667 0.00 0.00 0.00 3.36
2436 2829 5.186992 TCTGGTTCGAAAGTTGATAGGATCA 59.813 40.000 0.00 0.00 37.55 2.92
2437 2830 5.175859 TGGTTCGAAAGTTGATAGGATCAC 58.824 41.667 0.00 0.00 39.39 3.06
2438 2831 4.571176 GGTTCGAAAGTTGATAGGATCACC 59.429 45.833 0.00 0.00 39.39 4.02
2439 2832 4.402056 TCGAAAGTTGATAGGATCACCC 57.598 45.455 0.00 0.00 39.39 4.61
2440 2833 3.772572 TCGAAAGTTGATAGGATCACCCA 59.227 43.478 0.00 0.00 39.39 4.51
2441 2834 4.408921 TCGAAAGTTGATAGGATCACCCAT 59.591 41.667 0.00 0.00 39.39 4.00
2442 2835 4.512944 CGAAAGTTGATAGGATCACCCATG 59.487 45.833 0.00 0.00 39.39 3.66
2443 2836 5.440610 GAAAGTTGATAGGATCACCCATGT 58.559 41.667 0.00 0.00 39.39 3.21
2444 2837 5.456921 AAGTTGATAGGATCACCCATGTT 57.543 39.130 0.00 0.00 39.39 2.71
2445 2838 5.041191 AGTTGATAGGATCACCCATGTTC 57.959 43.478 0.00 0.00 39.39 3.18
2446 2839 4.723789 AGTTGATAGGATCACCCATGTTCT 59.276 41.667 0.00 0.00 39.39 3.01
2447 2840 4.963318 TGATAGGATCACCCATGTTCTC 57.037 45.455 0.00 0.00 37.41 2.87
2448 2841 4.297768 TGATAGGATCACCCATGTTCTCA 58.702 43.478 0.00 0.00 37.41 3.27
2449 2842 4.721274 TGATAGGATCACCCATGTTCTCAA 59.279 41.667 0.00 0.00 37.41 3.02
2450 2843 5.191522 TGATAGGATCACCCATGTTCTCAAA 59.808 40.000 0.00 0.00 37.41 2.69
2451 2844 4.598036 AGGATCACCCATGTTCTCAAAT 57.402 40.909 0.00 0.00 37.41 2.32
2452 2845 4.939255 AGGATCACCCATGTTCTCAAATT 58.061 39.130 0.00 0.00 37.41 1.82
2453 2846 4.952335 AGGATCACCCATGTTCTCAAATTC 59.048 41.667 0.00 0.00 37.41 2.17
2454 2847 4.952335 GGATCACCCATGTTCTCAAATTCT 59.048 41.667 0.00 0.00 34.14 2.40
2455 2848 6.069440 AGGATCACCCATGTTCTCAAATTCTA 60.069 38.462 0.00 0.00 37.41 2.10
2456 2849 6.261826 GGATCACCCATGTTCTCAAATTCTAG 59.738 42.308 0.00 0.00 34.14 2.43
2457 2850 6.373005 TCACCCATGTTCTCAAATTCTAGA 57.627 37.500 0.00 0.00 0.00 2.43
2458 2851 6.409704 TCACCCATGTTCTCAAATTCTAGAG 58.590 40.000 0.00 0.00 0.00 2.43
2459 2852 6.013379 TCACCCATGTTCTCAAATTCTAGAGT 60.013 38.462 0.00 0.00 33.63 3.24
2460 2853 6.656693 CACCCATGTTCTCAAATTCTAGAGTT 59.343 38.462 0.00 0.00 33.63 3.01
2461 2854 6.656693 ACCCATGTTCTCAAATTCTAGAGTTG 59.343 38.462 0.66 6.58 33.63 3.16
2462 2855 6.404074 CCCATGTTCTCAAATTCTAGAGTTGC 60.404 42.308 0.66 0.00 33.63 4.17
2463 2856 6.404074 CCATGTTCTCAAATTCTAGAGTTGCC 60.404 42.308 0.66 0.00 33.63 4.52
2464 2857 4.690748 TGTTCTCAAATTCTAGAGTTGCCG 59.309 41.667 0.66 2.32 33.63 5.69
2465 2858 3.262420 TCTCAAATTCTAGAGTTGCCGC 58.738 45.455 0.66 0.00 33.63 6.53
2466 2859 1.999735 TCAAATTCTAGAGTTGCCGCG 59.000 47.619 0.00 0.00 0.00 6.46
2467 2860 1.999735 CAAATTCTAGAGTTGCCGCGA 59.000 47.619 8.23 0.00 0.00 5.87
2468 2861 1.641577 AATTCTAGAGTTGCCGCGAC 58.358 50.000 8.23 2.12 0.00 5.19
2469 2862 0.530744 ATTCTAGAGTTGCCGCGACA 59.469 50.000 8.23 0.00 0.00 4.35
2470 2863 0.530744 TTCTAGAGTTGCCGCGACAT 59.469 50.000 8.23 3.87 0.00 3.06
2471 2864 0.100682 TCTAGAGTTGCCGCGACATC 59.899 55.000 8.23 0.04 0.00 3.06
2472 2865 1.202973 CTAGAGTTGCCGCGACATCG 61.203 60.000 8.23 0.00 43.27 3.84
2473 2866 1.929806 TAGAGTTGCCGCGACATCGT 61.930 55.000 8.23 0.00 42.22 3.73
2474 2867 2.789203 GAGTTGCCGCGACATCGTC 61.789 63.158 8.23 0.00 42.22 4.20
2475 2868 3.109547 GTTGCCGCGACATCGTCA 61.110 61.111 8.23 0.00 42.22 4.35
2476 2869 3.109547 TTGCCGCGACATCGTCAC 61.110 61.111 8.23 0.00 42.22 3.67
2477 2870 3.567478 TTGCCGCGACATCGTCACT 62.567 57.895 8.23 0.00 42.22 3.41
2478 2871 3.248171 GCCGCGACATCGTCACTC 61.248 66.667 8.23 0.00 42.22 3.51
2479 2872 2.485582 CCGCGACATCGTCACTCT 59.514 61.111 8.23 0.00 42.22 3.24
2480 2873 1.583967 CCGCGACATCGTCACTCTC 60.584 63.158 8.23 0.00 42.22 3.20
2481 2874 1.134694 CGCGACATCGTCACTCTCA 59.865 57.895 0.00 0.00 42.22 3.27
2482 2875 0.248255 CGCGACATCGTCACTCTCAT 60.248 55.000 0.00 0.00 42.22 2.90
2483 2876 1.471964 GCGACATCGTCACTCTCATC 58.528 55.000 2.85 0.00 42.22 2.92
2484 2877 1.862008 GCGACATCGTCACTCTCATCC 60.862 57.143 2.85 0.00 42.22 3.51
2485 2878 1.673400 CGACATCGTCACTCTCATCCT 59.327 52.381 0.00 0.00 32.09 3.24
2486 2879 2.286713 CGACATCGTCACTCTCATCCTC 60.287 54.545 0.00 0.00 32.09 3.71
2487 2880 1.673400 ACATCGTCACTCTCATCCTCG 59.327 52.381 0.00 0.00 0.00 4.63
2488 2881 1.943340 CATCGTCACTCTCATCCTCGA 59.057 52.381 0.00 0.00 0.00 4.04
2489 2882 1.370609 TCGTCACTCTCATCCTCGAC 58.629 55.000 0.00 0.00 0.00 4.20
2490 2883 0.026933 CGTCACTCTCATCCTCGACG 59.973 60.000 0.00 0.00 40.04 5.12
2491 2884 1.370609 GTCACTCTCATCCTCGACGA 58.629 55.000 0.00 0.00 0.00 4.20
2492 2885 1.944024 GTCACTCTCATCCTCGACGAT 59.056 52.381 0.00 0.00 0.00 3.73
2493 2886 2.032377 GTCACTCTCATCCTCGACGATC 60.032 54.545 0.00 0.00 0.00 3.69
2494 2887 1.943340 CACTCTCATCCTCGACGATCA 59.057 52.381 0.00 0.00 0.00 2.92
2495 2888 2.551887 CACTCTCATCCTCGACGATCAT 59.448 50.000 0.00 0.00 0.00 2.45
2496 2889 3.748568 CACTCTCATCCTCGACGATCATA 59.251 47.826 0.00 0.00 0.00 2.15
2497 2890 4.394610 CACTCTCATCCTCGACGATCATAT 59.605 45.833 0.00 0.00 0.00 1.78
2498 2891 5.007034 ACTCTCATCCTCGACGATCATATT 58.993 41.667 0.00 0.00 0.00 1.28
2499 2892 5.106357 ACTCTCATCCTCGACGATCATATTG 60.106 44.000 0.00 0.00 0.00 1.90
2500 2893 4.762251 TCTCATCCTCGACGATCATATTGT 59.238 41.667 0.00 0.00 0.00 2.71
2501 2894 4.798574 TCATCCTCGACGATCATATTGTG 58.201 43.478 0.00 0.00 0.00 3.33
2502 2895 3.013276 TCCTCGACGATCATATTGTGC 57.987 47.619 0.00 0.00 0.00 4.57
2503 2896 2.360801 TCCTCGACGATCATATTGTGCA 59.639 45.455 0.00 0.00 0.00 4.57
2504 2897 3.005791 TCCTCGACGATCATATTGTGCAT 59.994 43.478 0.00 0.00 0.00 3.96
2505 2898 3.122445 CCTCGACGATCATATTGTGCATG 59.878 47.826 0.00 0.00 0.00 4.06
2506 2899 3.976169 TCGACGATCATATTGTGCATGA 58.024 40.909 0.00 0.00 36.86 3.07
2507 2900 4.559153 TCGACGATCATATTGTGCATGAT 58.441 39.130 0.00 0.00 44.02 2.45
2515 2908 7.997107 ATCATATTGTGCATGATCAAACAAC 57.003 32.000 18.65 8.53 38.47 3.32
2516 2909 6.921914 TCATATTGTGCATGATCAAACAACA 58.078 32.000 18.65 11.55 35.51 3.33
2517 2910 7.548967 TCATATTGTGCATGATCAAACAACAT 58.451 30.769 18.65 12.93 35.51 2.71
2518 2911 7.489757 TCATATTGTGCATGATCAAACAACATG 59.510 33.333 22.25 22.25 38.28 3.21
2519 2912 4.587584 TGTGCATGATCAAACAACATGT 57.412 36.364 0.00 0.00 41.99 3.21
2520 2913 4.548494 TGTGCATGATCAAACAACATGTC 58.452 39.130 0.00 0.00 41.99 3.06
2521 2914 4.037684 TGTGCATGATCAAACAACATGTCA 59.962 37.500 0.00 0.00 41.99 3.58
2522 2915 5.165676 GTGCATGATCAAACAACATGTCAT 58.834 37.500 0.00 0.00 41.99 3.06
2523 2916 5.287752 GTGCATGATCAAACAACATGTCATC 59.712 40.000 0.00 0.00 41.99 2.92
2524 2917 5.047943 TGCATGATCAAACAACATGTCATCA 60.048 36.000 0.00 1.28 41.99 3.07
2525 2918 5.287752 GCATGATCAAACAACATGTCATCAC 59.712 40.000 0.00 0.00 41.99 3.06
2526 2919 5.375417 TGATCAAACAACATGTCATCACC 57.625 39.130 0.00 0.00 0.00 4.02
2527 2920 5.072055 TGATCAAACAACATGTCATCACCT 58.928 37.500 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.103911 GTCGAACTGACGGCGTGG 61.104 66.667 21.19 12.97 37.96 4.94
14 15 0.997196 GCCCATTACGTCGAACTGAC 59.003 55.000 0.00 0.00 44.53 3.51
15 16 0.457166 CGCCCATTACGTCGAACTGA 60.457 55.000 0.00 0.00 0.00 3.41
16 17 0.734942 ACGCCCATTACGTCGAACTG 60.735 55.000 0.00 0.00 40.28 3.16
17 18 0.734942 CACGCCCATTACGTCGAACT 60.735 55.000 0.00 0.00 42.96 3.01
18 19 1.705727 CACGCCCATTACGTCGAAC 59.294 57.895 0.00 0.00 42.96 3.95
19 20 2.095847 GCACGCCCATTACGTCGAA 61.096 57.895 0.00 0.00 42.96 3.71
20 21 2.507547 GCACGCCCATTACGTCGA 60.508 61.111 0.00 0.00 42.96 4.20
21 22 3.560278 GGCACGCCCATTACGTCG 61.560 66.667 0.00 0.00 42.96 5.12
60 61 3.770933 CCCCCATATTCAGCCCAAATATG 59.229 47.826 12.85 12.85 42.67 1.78
61 62 4.065214 CCCCCATATTCAGCCCAAATAT 57.935 45.455 0.00 0.00 31.08 1.28
62 63 3.541242 CCCCCATATTCAGCCCAAATA 57.459 47.619 0.00 0.00 0.00 1.40
63 64 2.403899 CCCCCATATTCAGCCCAAAT 57.596 50.000 0.00 0.00 0.00 2.32
64 65 3.944061 CCCCCATATTCAGCCCAAA 57.056 52.632 0.00 0.00 0.00 3.28
88 89 3.436924 CAAACGCCCGGGCTAACC 61.437 66.667 41.01 14.75 39.32 2.85
89 90 2.358984 TCAAACGCCCGGGCTAAC 60.359 61.111 41.01 15.17 39.32 2.34
90 91 2.046700 CTCAAACGCCCGGGCTAA 60.047 61.111 41.01 20.82 39.32 3.09
91 92 4.090588 CCTCAAACGCCCGGGCTA 62.091 66.667 41.01 20.49 39.32 3.93
98 99 3.292159 AAACGGCCCTCAAACGCC 61.292 61.111 0.00 0.00 42.05 5.68
99 100 2.050442 CAAACGGCCCTCAAACGC 60.050 61.111 0.00 0.00 0.00 4.84
100 101 0.882927 TCTCAAACGGCCCTCAAACG 60.883 55.000 0.00 0.00 0.00 3.60
101 102 0.875059 CTCTCAAACGGCCCTCAAAC 59.125 55.000 0.00 0.00 0.00 2.93
102 103 0.250727 CCTCTCAAACGGCCCTCAAA 60.251 55.000 0.00 0.00 0.00 2.69
103 104 1.374947 CCTCTCAAACGGCCCTCAA 59.625 57.895 0.00 0.00 0.00 3.02
104 105 1.827399 GACCTCTCAAACGGCCCTCA 61.827 60.000 0.00 0.00 0.00 3.86
105 106 1.079057 GACCTCTCAAACGGCCCTC 60.079 63.158 0.00 0.00 0.00 4.30
106 107 2.593956 GGACCTCTCAAACGGCCCT 61.594 63.158 0.00 0.00 0.00 5.19
107 108 2.046217 GGACCTCTCAAACGGCCC 60.046 66.667 0.00 0.00 0.00 5.80
108 109 2.434359 CGGACCTCTCAAACGGCC 60.434 66.667 0.00 0.00 0.00 6.13
109 110 3.119096 GCGGACCTCTCAAACGGC 61.119 66.667 0.00 0.00 0.00 5.68
110 111 2.434359 GGCGGACCTCTCAAACGG 60.434 66.667 0.00 0.00 0.00 4.44
111 112 1.738099 CAGGCGGACCTCTCAAACG 60.738 63.158 0.00 0.00 46.34 3.60
112 113 0.034896 TTCAGGCGGACCTCTCAAAC 59.965 55.000 0.00 0.00 46.34 2.93
113 114 0.984230 ATTCAGGCGGACCTCTCAAA 59.016 50.000 0.00 0.00 46.34 2.69
114 115 0.537188 GATTCAGGCGGACCTCTCAA 59.463 55.000 0.00 0.00 46.34 3.02
115 116 0.614697 TGATTCAGGCGGACCTCTCA 60.615 55.000 0.00 0.00 46.34 3.27
116 117 0.537188 TTGATTCAGGCGGACCTCTC 59.463 55.000 0.00 0.00 46.34 3.20
117 118 0.984230 TTTGATTCAGGCGGACCTCT 59.016 50.000 0.00 0.00 46.34 3.69
118 119 1.821216 TTTTGATTCAGGCGGACCTC 58.179 50.000 0.00 0.00 46.34 3.85
135 136 5.453198 GGACAAACCATCCAGTCACATTTTT 60.453 40.000 0.00 0.00 38.79 1.94
136 137 4.039124 GGACAAACCATCCAGTCACATTTT 59.961 41.667 0.00 0.00 38.79 1.82
137 138 3.573967 GGACAAACCATCCAGTCACATTT 59.426 43.478 0.00 0.00 38.79 2.32
138 139 3.157087 GGACAAACCATCCAGTCACATT 58.843 45.455 0.00 0.00 38.79 2.71
139 140 2.795329 GGACAAACCATCCAGTCACAT 58.205 47.619 0.00 0.00 38.79 3.21
140 141 1.542328 CGGACAAACCATCCAGTCACA 60.542 52.381 0.00 0.00 38.90 3.58
141 142 1.156736 CGGACAAACCATCCAGTCAC 58.843 55.000 0.00 0.00 38.90 3.67
142 143 0.036164 CCGGACAAACCATCCAGTCA 59.964 55.000 0.00 0.00 38.90 3.41
143 144 0.323629 TCCGGACAAACCATCCAGTC 59.676 55.000 0.00 0.00 38.90 3.51
144 145 0.036306 GTCCGGACAAACCATCCAGT 59.964 55.000 29.75 0.00 38.90 4.00
145 146 0.036164 TGTCCGGACAAACCATCCAG 59.964 55.000 34.60 0.00 38.56 3.86
146 147 0.695924 ATGTCCGGACAAACCATCCA 59.304 50.000 39.04 14.73 45.41 3.41
147 148 1.834188 AATGTCCGGACAAACCATCC 58.166 50.000 39.04 8.77 45.41 3.51
148 149 2.817258 TCAAATGTCCGGACAAACCATC 59.183 45.455 39.04 9.57 45.41 3.51
149 150 2.819608 CTCAAATGTCCGGACAAACCAT 59.180 45.455 39.04 21.24 45.41 3.55
150 151 2.158740 TCTCAAATGTCCGGACAAACCA 60.159 45.455 39.04 22.33 45.41 3.67
151 152 2.225727 GTCTCAAATGTCCGGACAAACC 59.774 50.000 39.04 19.00 45.41 3.27
152 153 2.096417 CGTCTCAAATGTCCGGACAAAC 60.096 50.000 39.04 25.59 45.41 2.93
153 154 2.139917 CGTCTCAAATGTCCGGACAAA 58.860 47.619 39.04 23.10 45.41 2.83
154 155 1.341852 TCGTCTCAAATGTCCGGACAA 59.658 47.619 39.04 22.69 45.41 3.18
155 156 0.963225 TCGTCTCAAATGTCCGGACA 59.037 50.000 37.79 37.79 46.44 4.02
156 157 1.067776 ACTCGTCTCAAATGTCCGGAC 60.068 52.381 28.17 28.17 0.00 4.79
157 158 1.254026 ACTCGTCTCAAATGTCCGGA 58.746 50.000 0.00 0.00 0.00 5.14
158 159 2.080286 AACTCGTCTCAAATGTCCGG 57.920 50.000 0.00 0.00 0.00 5.14
159 160 2.157668 CCAAACTCGTCTCAAATGTCCG 59.842 50.000 0.00 0.00 0.00 4.79
160 161 2.484264 CCCAAACTCGTCTCAAATGTCC 59.516 50.000 0.00 0.00 0.00 4.02
161 162 3.399330 TCCCAAACTCGTCTCAAATGTC 58.601 45.455 0.00 0.00 0.00 3.06
162 163 3.403038 CTCCCAAACTCGTCTCAAATGT 58.597 45.455 0.00 0.00 0.00 2.71
163 164 2.744202 CCTCCCAAACTCGTCTCAAATG 59.256 50.000 0.00 0.00 0.00 2.32
164 165 2.372172 ACCTCCCAAACTCGTCTCAAAT 59.628 45.455 0.00 0.00 0.00 2.32
165 166 1.766496 ACCTCCCAAACTCGTCTCAAA 59.234 47.619 0.00 0.00 0.00 2.69
166 167 1.343465 GACCTCCCAAACTCGTCTCAA 59.657 52.381 0.00 0.00 0.00 3.02
167 168 0.966920 GACCTCCCAAACTCGTCTCA 59.033 55.000 0.00 0.00 0.00 3.27
168 169 0.246910 GGACCTCCCAAACTCGTCTC 59.753 60.000 0.00 0.00 34.14 3.36
169 170 1.533469 CGGACCTCCCAAACTCGTCT 61.533 60.000 0.00 0.00 34.14 4.18
170 171 1.080025 CGGACCTCCCAAACTCGTC 60.080 63.158 0.00 0.00 34.14 4.20
171 172 2.580601 CCGGACCTCCCAAACTCGT 61.581 63.158 0.00 0.00 34.14 4.18
172 173 2.108278 AACCGGACCTCCCAAACTCG 62.108 60.000 9.46 0.00 34.14 4.18
173 174 0.605589 CAACCGGACCTCCCAAACTC 60.606 60.000 9.46 0.00 34.14 3.01
174 175 1.350310 ACAACCGGACCTCCCAAACT 61.350 55.000 9.46 0.00 34.14 2.66
175 176 0.397564 TACAACCGGACCTCCCAAAC 59.602 55.000 9.46 0.00 34.14 2.93
176 177 0.688487 CTACAACCGGACCTCCCAAA 59.312 55.000 9.46 0.00 34.14 3.28
177 178 0.178926 TCTACAACCGGACCTCCCAA 60.179 55.000 9.46 0.00 34.14 4.12
178 179 0.042131 ATCTACAACCGGACCTCCCA 59.958 55.000 9.46 0.00 34.14 4.37
179 180 0.464452 CATCTACAACCGGACCTCCC 59.536 60.000 9.46 0.00 0.00 4.30
180 181 0.179081 GCATCTACAACCGGACCTCC 60.179 60.000 9.46 0.00 0.00 4.30
181 182 0.824759 AGCATCTACAACCGGACCTC 59.175 55.000 9.46 0.00 0.00 3.85
182 183 0.824759 GAGCATCTACAACCGGACCT 59.175 55.000 9.46 0.00 0.00 3.85
183 184 3.364277 GAGCATCTACAACCGGACC 57.636 57.895 9.46 0.00 0.00 4.46
239 240 6.701400 CGACATGTTCATACTCCATGTTCATA 59.299 38.462 0.00 0.00 46.70 2.15
240 241 5.525012 CGACATGTTCATACTCCATGTTCAT 59.475 40.000 0.00 0.00 46.70 2.57
241 242 4.869861 CGACATGTTCATACTCCATGTTCA 59.130 41.667 0.00 0.00 46.70 3.18
242 243 4.870426 ACGACATGTTCATACTCCATGTTC 59.130 41.667 0.00 0.54 46.70 3.18
300 301 4.562394 CGAATATTTTGAATGCCACACCAC 59.438 41.667 0.00 0.00 0.00 4.16
327 328 3.112263 CATACCCTAGGTTTCAGGTCCA 58.888 50.000 8.29 0.00 37.09 4.02
345 346 4.022503 CAGTCTGCAGAGCTATAGTGCATA 60.023 45.833 18.89 7.22 45.77 3.14
436 437 3.055240 CCAACTCTGGAAGCTCTCTCATT 60.055 47.826 0.00 0.00 46.92 2.57
565 566 0.035598 TGCCAAAATTCCGACTCCGA 59.964 50.000 0.00 0.00 38.22 4.55
566 567 0.447801 CTGCCAAAATTCCGACTCCG 59.552 55.000 0.00 0.00 0.00 4.63
567 568 1.468914 GTCTGCCAAAATTCCGACTCC 59.531 52.381 0.00 0.00 0.00 3.85
568 569 1.128692 CGTCTGCCAAAATTCCGACTC 59.871 52.381 0.00 0.00 0.00 3.36
569 570 1.156736 CGTCTGCCAAAATTCCGACT 58.843 50.000 0.00 0.00 0.00 4.18
570 571 0.168128 CCGTCTGCCAAAATTCCGAC 59.832 55.000 0.00 0.00 0.00 4.79
571 572 0.035598 TCCGTCTGCCAAAATTCCGA 59.964 50.000 0.00 0.00 0.00 4.55
572 573 0.878416 TTCCGTCTGCCAAAATTCCG 59.122 50.000 0.00 0.00 0.00 4.30
573 574 2.609491 GGTTTCCGTCTGCCAAAATTCC 60.609 50.000 0.00 0.00 0.00 3.01
574 575 2.035321 TGGTTTCCGTCTGCCAAAATTC 59.965 45.455 0.00 0.00 0.00 2.17
597 598 0.904394 GTCAACCCCTACCGGTGGTA 60.904 60.000 19.93 0.00 37.09 3.25
610 611 4.392138 GGTTCTGCTACTGTATTGTCAACC 59.608 45.833 0.00 0.00 0.00 3.77
668 669 5.278364 CCCAGCATTATTTTCTCAGCATCTC 60.278 44.000 0.00 0.00 0.00 2.75
677 678 2.301346 CTCGGCCCAGCATTATTTTCT 58.699 47.619 0.00 0.00 0.00 2.52
678 679 1.269257 GCTCGGCCCAGCATTATTTTC 60.269 52.381 18.41 0.00 39.43 2.29
679 680 0.746659 GCTCGGCCCAGCATTATTTT 59.253 50.000 18.41 0.00 39.43 1.82
680 681 1.109323 GGCTCGGCCCAGCATTATTT 61.109 55.000 24.44 0.00 44.06 1.40
681 682 1.529244 GGCTCGGCCCAGCATTATT 60.529 57.895 24.44 0.00 44.06 1.40
682 683 2.113986 GGCTCGGCCCAGCATTAT 59.886 61.111 24.44 0.00 44.06 1.28
723 724 5.670284 CGATCGAGACGTTTTGTAGTAGTAC 59.330 44.000 10.26 0.37 0.00 2.73
724 725 5.576774 TCGATCGAGACGTTTTGTAGTAGTA 59.423 40.000 15.15 0.00 0.00 1.82
725 726 4.389992 TCGATCGAGACGTTTTGTAGTAGT 59.610 41.667 15.15 0.00 0.00 2.73
726 727 4.890378 TCGATCGAGACGTTTTGTAGTAG 58.110 43.478 15.15 0.00 0.00 2.57
727 728 4.726021 GCTCGATCGAGACGTTTTGTAGTA 60.726 45.833 41.45 5.59 44.53 1.82
728 729 3.744987 CTCGATCGAGACGTTTTGTAGT 58.255 45.455 36.13 0.00 44.53 2.73
729 730 2.526688 GCTCGATCGAGACGTTTTGTAG 59.473 50.000 41.45 17.17 44.53 2.74
814 828 4.194720 GAGCGCCCGTCTCGTGAT 62.195 66.667 2.29 0.00 0.00 3.06
907 921 0.776451 GCGCAGATATAACGTGACCG 59.224 55.000 0.30 0.00 40.83 4.79
971 986 2.289444 TGTTTCTTGGGTTCCTAGCGAG 60.289 50.000 0.00 0.00 0.00 5.03
995 1010 1.022735 GCTCATGTCCCTCATTGCTG 58.977 55.000 0.00 0.00 34.09 4.41
996 1011 0.463295 CGCTCATGTCCCTCATTGCT 60.463 55.000 0.00 0.00 34.09 3.91
1097 1457 2.312390 TGTGCATCATCCCCATCATTG 58.688 47.619 0.00 0.00 0.00 2.82
1098 1458 2.759839 TGTGCATCATCCCCATCATT 57.240 45.000 0.00 0.00 0.00 2.57
1544 1904 5.698545 AGTACAAGAAGATCACAGAAGCAAC 59.301 40.000 0.00 0.00 0.00 4.17
1574 1934 1.629043 TCCGACATAGTGATAGGGCC 58.371 55.000 0.00 0.00 0.00 5.80
1591 1951 3.805207 GGTACCAGTACACATTGGATCC 58.195 50.000 7.15 4.20 37.89 3.36
1619 1986 6.044171 GGAGTAGGAGTAGGAATGTAGTAGGA 59.956 46.154 0.00 0.00 0.00 2.94
1620 1987 6.183361 TGGAGTAGGAGTAGGAATGTAGTAGG 60.183 46.154 0.00 0.00 0.00 3.18
1621 1988 6.711645 GTGGAGTAGGAGTAGGAATGTAGTAG 59.288 46.154 0.00 0.00 0.00 2.57
1622 1989 6.159222 TGTGGAGTAGGAGTAGGAATGTAGTA 59.841 42.308 0.00 0.00 0.00 1.82
1623 1990 5.044328 TGTGGAGTAGGAGTAGGAATGTAGT 60.044 44.000 0.00 0.00 0.00 2.73
1624 1991 5.446860 TGTGGAGTAGGAGTAGGAATGTAG 58.553 45.833 0.00 0.00 0.00 2.74
1625 1992 5.461516 TGTGGAGTAGGAGTAGGAATGTA 57.538 43.478 0.00 0.00 0.00 2.29
1626 1993 4.332683 TGTGGAGTAGGAGTAGGAATGT 57.667 45.455 0.00 0.00 0.00 2.71
1627 1994 4.712337 ACTTGTGGAGTAGGAGTAGGAATG 59.288 45.833 0.00 0.00 36.65 2.67
1628 1995 4.949121 ACTTGTGGAGTAGGAGTAGGAAT 58.051 43.478 0.00 0.00 36.65 3.01
1629 1996 4.342359 GACTTGTGGAGTAGGAGTAGGAA 58.658 47.826 0.00 0.00 39.19 3.36
1694 2061 2.029290 ACTAGTGGTTGCTGGTTAGTCG 60.029 50.000 0.00 0.00 0.00 4.18
1764 2131 5.878406 ATTCGAGGATGGAGTCTAAACAT 57.122 39.130 0.00 0.00 0.00 2.71
1783 2150 8.110860 TGAAGAGTTTATCAGTTTGGGAATTC 57.889 34.615 0.00 0.00 0.00 2.17
1795 2162 9.490379 GAGGAGTTTAGTTTGAAGAGTTTATCA 57.510 33.333 0.00 0.00 0.00 2.15
1820 2187 3.016031 ACTGCACGCATAATTTGATGGA 58.984 40.909 0.00 0.00 0.00 3.41
1821 2188 3.425577 ACTGCACGCATAATTTGATGG 57.574 42.857 0.00 0.00 0.00 3.51
1822 2189 5.766702 AAAACTGCACGCATAATTTGATG 57.233 34.783 0.00 0.00 0.00 3.07
1835 2202 5.933790 TCGTGGACATAATAAAAACTGCAC 58.066 37.500 0.00 0.00 0.00 4.57
1837 2204 6.551736 ACATCGTGGACATAATAAAAACTGC 58.448 36.000 0.00 0.00 0.00 4.40
1838 2205 8.335356 CCTACATCGTGGACATAATAAAAACTG 58.665 37.037 0.00 0.00 0.00 3.16
1839 2206 8.262227 TCCTACATCGTGGACATAATAAAAACT 58.738 33.333 0.00 0.00 0.00 2.66
1840 2207 8.428186 TCCTACATCGTGGACATAATAAAAAC 57.572 34.615 0.00 0.00 0.00 2.43
1841 2208 7.713507 CCTCCTACATCGTGGACATAATAAAAA 59.286 37.037 0.00 0.00 0.00 1.94
1844 2211 6.072649 TCCTCCTACATCGTGGACATAATAA 58.927 40.000 0.00 0.00 0.00 1.40
2054 2446 3.981071 TGCTAGTTATGTTGCCTGAGT 57.019 42.857 0.00 0.00 0.00 3.41
2055 2447 4.093998 CAGTTGCTAGTTATGTTGCCTGAG 59.906 45.833 0.00 0.00 0.00 3.35
2056 2448 4.002982 CAGTTGCTAGTTATGTTGCCTGA 58.997 43.478 0.00 0.00 0.00 3.86
2057 2449 3.753272 ACAGTTGCTAGTTATGTTGCCTG 59.247 43.478 0.00 0.00 0.00 4.85
2058 2450 3.753272 CACAGTTGCTAGTTATGTTGCCT 59.247 43.478 0.00 0.00 0.00 4.75
2059 2451 3.502211 ACACAGTTGCTAGTTATGTTGCC 59.498 43.478 0.00 0.00 0.00 4.52
2060 2452 4.024048 ACACACAGTTGCTAGTTATGTTGC 60.024 41.667 0.00 0.00 0.00 4.17
2061 2453 5.673337 ACACACAGTTGCTAGTTATGTTG 57.327 39.130 0.00 0.00 0.00 3.33
2062 2454 7.979444 AATACACACAGTTGCTAGTTATGTT 57.021 32.000 0.00 0.00 0.00 2.71
2063 2455 7.979444 AAATACACACAGTTGCTAGTTATGT 57.021 32.000 0.00 0.00 0.00 2.29
2070 2462 8.898761 CCCAATATAAAATACACACAGTTGCTA 58.101 33.333 0.00 0.00 0.00 3.49
2072 2464 6.475402 GCCCAATATAAAATACACACAGTTGC 59.525 38.462 0.00 0.00 0.00 4.17
2073 2465 7.542890 TGCCCAATATAAAATACACACAGTTG 58.457 34.615 0.00 0.00 0.00 3.16
2074 2466 7.710676 TGCCCAATATAAAATACACACAGTT 57.289 32.000 0.00 0.00 0.00 3.16
2075 2467 7.147915 CCTTGCCCAATATAAAATACACACAGT 60.148 37.037 0.00 0.00 0.00 3.55
2076 2468 7.147915 ACCTTGCCCAATATAAAATACACACAG 60.148 37.037 0.00 0.00 0.00 3.66
2077 2469 6.665680 ACCTTGCCCAATATAAAATACACACA 59.334 34.615 0.00 0.00 0.00 3.72
2078 2470 7.107639 ACCTTGCCCAATATAAAATACACAC 57.892 36.000 0.00 0.00 0.00 3.82
2079 2471 7.726033 AACCTTGCCCAATATAAAATACACA 57.274 32.000 0.00 0.00 0.00 3.72
2080 2472 8.357402 CCTAACCTTGCCCAATATAAAATACAC 58.643 37.037 0.00 0.00 0.00 2.90
2081 2473 7.507616 CCCTAACCTTGCCCAATATAAAATACA 59.492 37.037 0.00 0.00 0.00 2.29
2082 2474 7.524863 GCCCTAACCTTGCCCAATATAAAATAC 60.525 40.741 0.00 0.00 0.00 1.89
2083 2475 6.495526 GCCCTAACCTTGCCCAATATAAAATA 59.504 38.462 0.00 0.00 0.00 1.40
2084 2476 5.306937 GCCCTAACCTTGCCCAATATAAAAT 59.693 40.000 0.00 0.00 0.00 1.82
2085 2477 4.651962 GCCCTAACCTTGCCCAATATAAAA 59.348 41.667 0.00 0.00 0.00 1.52
2086 2478 4.219919 GCCCTAACCTTGCCCAATATAAA 58.780 43.478 0.00 0.00 0.00 1.40
2087 2479 3.205507 TGCCCTAACCTTGCCCAATATAA 59.794 43.478 0.00 0.00 0.00 0.98
2088 2480 2.786445 TGCCCTAACCTTGCCCAATATA 59.214 45.455 0.00 0.00 0.00 0.86
2111 2503 0.817634 TTTGCGGGTCACAGTTGGAG 60.818 55.000 0.00 0.00 0.00 3.86
2118 2510 1.243902 GAGGAAATTTGCGGGTCACA 58.756 50.000 3.87 0.00 0.00 3.58
2135 2528 1.143838 TCCATGGACGAATGCGGAG 59.856 57.895 11.44 0.00 43.17 4.63
2136 2529 1.153449 GTCCATGGACGAATGCGGA 60.153 57.895 28.52 0.00 43.17 5.54
2148 2541 1.472201 CCTCTCACATCCGTGTCCATG 60.472 57.143 0.00 0.00 44.02 3.66
2149 2542 0.826715 CCTCTCACATCCGTGTCCAT 59.173 55.000 0.00 0.00 44.02 3.41
2170 2563 1.876714 CGGCTACGGTTGGATGACG 60.877 63.158 0.00 0.00 36.18 4.35
2172 2565 1.405872 ATACGGCTACGGTTGGATGA 58.594 50.000 0.00 0.00 46.48 2.92
2213 2606 5.437289 TTGATCGTGCAGACTTGATTTTT 57.563 34.783 0.00 0.00 0.00 1.94
2214 2607 5.437289 TTTGATCGTGCAGACTTGATTTT 57.563 34.783 0.00 0.00 0.00 1.82
2215 2608 5.633830 ATTTGATCGTGCAGACTTGATTT 57.366 34.783 0.00 0.00 0.00 2.17
2216 2609 5.295292 CCTATTTGATCGTGCAGACTTGATT 59.705 40.000 0.00 0.00 0.00 2.57
2217 2610 4.813161 CCTATTTGATCGTGCAGACTTGAT 59.187 41.667 0.00 0.00 0.00 2.57
2219 2612 3.242543 GCCTATTTGATCGTGCAGACTTG 60.243 47.826 0.00 0.00 0.00 3.16
2225 2618 0.742635 TGCGCCTATTTGATCGTGCA 60.743 50.000 4.18 0.87 39.27 4.57
2267 2660 9.308000 TGTTGGGATGTAATATTTGAACTTCTT 57.692 29.630 0.00 0.00 0.00 2.52
2268 2661 8.877864 TGTTGGGATGTAATATTTGAACTTCT 57.122 30.769 0.00 0.00 0.00 2.85
2270 2663 9.874205 CAATGTTGGGATGTAATATTTGAACTT 57.126 29.630 0.00 0.00 0.00 2.66
2271 2664 9.034800 ACAATGTTGGGATGTAATATTTGAACT 57.965 29.630 0.00 0.00 0.00 3.01
2272 2665 9.651913 AACAATGTTGGGATGTAATATTTGAAC 57.348 29.630 0.00 0.00 0.00 3.18
2273 2666 9.868277 GAACAATGTTGGGATGTAATATTTGAA 57.132 29.630 2.20 0.00 0.00 2.69
2274 2667 9.253832 AGAACAATGTTGGGATGTAATATTTGA 57.746 29.630 2.20 0.00 0.00 2.69
2275 2668 9.520204 GAGAACAATGTTGGGATGTAATATTTG 57.480 33.333 2.20 0.00 0.00 2.32
2276 2669 8.695456 GGAGAACAATGTTGGGATGTAATATTT 58.305 33.333 2.20 0.00 0.00 1.40
2277 2670 7.287696 GGGAGAACAATGTTGGGATGTAATATT 59.712 37.037 2.20 0.00 0.00 1.28
2278 2671 6.777580 GGGAGAACAATGTTGGGATGTAATAT 59.222 38.462 2.20 0.00 0.00 1.28
2279 2672 6.126409 GGGAGAACAATGTTGGGATGTAATA 58.874 40.000 2.20 0.00 0.00 0.98
2280 2673 4.956075 GGGAGAACAATGTTGGGATGTAAT 59.044 41.667 2.20 0.00 0.00 1.89
2281 2674 4.340617 GGGAGAACAATGTTGGGATGTAA 58.659 43.478 2.20 0.00 0.00 2.41
2282 2675 3.308832 GGGGAGAACAATGTTGGGATGTA 60.309 47.826 2.20 0.00 0.00 2.29
2283 2676 2.557452 GGGGAGAACAATGTTGGGATGT 60.557 50.000 2.20 0.00 0.00 3.06
2284 2677 2.102578 GGGGAGAACAATGTTGGGATG 58.897 52.381 2.20 0.00 0.00 3.51
2285 2678 2.003072 AGGGGAGAACAATGTTGGGAT 58.997 47.619 2.20 0.00 0.00 3.85
2286 2679 1.455822 AGGGGAGAACAATGTTGGGA 58.544 50.000 2.20 0.00 0.00 4.37
2287 2680 2.309136 AAGGGGAGAACAATGTTGGG 57.691 50.000 2.20 0.00 0.00 4.12
2288 2681 2.228822 CGAAAGGGGAGAACAATGTTGG 59.771 50.000 2.20 0.00 0.00 3.77
2289 2682 2.351738 GCGAAAGGGGAGAACAATGTTG 60.352 50.000 2.20 0.00 0.00 3.33
2290 2683 1.886542 GCGAAAGGGGAGAACAATGTT 59.113 47.619 0.00 0.00 0.00 2.71
2291 2684 1.534729 GCGAAAGGGGAGAACAATGT 58.465 50.000 0.00 0.00 0.00 2.71
2292 2685 0.811281 GGCGAAAGGGGAGAACAATG 59.189 55.000 0.00 0.00 0.00 2.82
2293 2686 0.676782 CGGCGAAAGGGGAGAACAAT 60.677 55.000 0.00 0.00 0.00 2.71
2294 2687 1.302192 CGGCGAAAGGGGAGAACAA 60.302 57.895 0.00 0.00 0.00 2.83
2295 2688 2.345991 CGGCGAAAGGGGAGAACA 59.654 61.111 0.00 0.00 0.00 3.18
2296 2689 3.125573 GCGGCGAAAGGGGAGAAC 61.126 66.667 12.98 0.00 0.00 3.01
2297 2690 4.404098 GGCGGCGAAAGGGGAGAA 62.404 66.667 12.98 0.00 0.00 2.87
2303 2696 2.587322 TATCAGTGGGCGGCGAAAGG 62.587 60.000 12.98 0.00 0.00 3.11
2304 2697 1.153449 TATCAGTGGGCGGCGAAAG 60.153 57.895 12.98 0.00 0.00 2.62
2305 2698 1.448893 GTATCAGTGGGCGGCGAAA 60.449 57.895 12.98 0.00 0.00 3.46
2306 2699 1.895020 AAGTATCAGTGGGCGGCGAA 61.895 55.000 12.98 0.00 0.00 4.70
2307 2700 1.038681 TAAGTATCAGTGGGCGGCGA 61.039 55.000 12.98 0.00 0.00 5.54
2308 2701 0.179094 TTAAGTATCAGTGGGCGGCG 60.179 55.000 0.51 0.51 0.00 6.46
2309 2702 2.143925 GATTAAGTATCAGTGGGCGGC 58.856 52.381 0.00 0.00 33.21 6.53
2310 2703 3.469008 TGATTAAGTATCAGTGGGCGG 57.531 47.619 0.00 0.00 38.35 6.13
2318 2711 9.113838 GCTGAAGGAAAATCTGATTAAGTATCA 57.886 33.333 2.85 5.81 40.96 2.15
2319 2712 9.336171 AGCTGAAGGAAAATCTGATTAAGTATC 57.664 33.333 2.85 1.69 0.00 2.24
2320 2713 9.118300 CAGCTGAAGGAAAATCTGATTAAGTAT 57.882 33.333 8.42 0.00 0.00 2.12
2321 2714 8.103305 ACAGCTGAAGGAAAATCTGATTAAGTA 58.897 33.333 23.35 0.00 0.00 2.24
2322 2715 6.944862 ACAGCTGAAGGAAAATCTGATTAAGT 59.055 34.615 23.35 0.00 0.00 2.24
2323 2716 7.388460 ACAGCTGAAGGAAAATCTGATTAAG 57.612 36.000 23.35 0.00 0.00 1.85
2324 2717 7.448161 TGAACAGCTGAAGGAAAATCTGATTAA 59.552 33.333 23.35 0.00 0.00 1.40
2325 2718 6.942005 TGAACAGCTGAAGGAAAATCTGATTA 59.058 34.615 23.35 0.00 0.00 1.75
2326 2719 5.771666 TGAACAGCTGAAGGAAAATCTGATT 59.228 36.000 23.35 0.00 0.00 2.57
2327 2720 5.319453 TGAACAGCTGAAGGAAAATCTGAT 58.681 37.500 23.35 0.00 0.00 2.90
2328 2721 4.717877 TGAACAGCTGAAGGAAAATCTGA 58.282 39.130 23.35 0.00 0.00 3.27
2329 2722 5.182570 TCATGAACAGCTGAAGGAAAATCTG 59.817 40.000 23.35 3.90 0.00 2.90
2330 2723 5.319453 TCATGAACAGCTGAAGGAAAATCT 58.681 37.500 23.35 0.00 0.00 2.40
2331 2724 5.182760 ACTCATGAACAGCTGAAGGAAAATC 59.817 40.000 23.35 5.76 0.00 2.17
2332 2725 5.075493 ACTCATGAACAGCTGAAGGAAAAT 58.925 37.500 23.35 0.96 0.00 1.82
2333 2726 4.464008 ACTCATGAACAGCTGAAGGAAAA 58.536 39.130 23.35 0.00 0.00 2.29
2334 2727 4.090761 ACTCATGAACAGCTGAAGGAAA 57.909 40.909 23.35 0.42 0.00 3.13
2335 2728 3.777106 ACTCATGAACAGCTGAAGGAA 57.223 42.857 23.35 1.00 0.00 3.36
2336 2729 3.405831 CAACTCATGAACAGCTGAAGGA 58.594 45.455 23.35 11.47 0.00 3.36
2337 2730 2.486982 CCAACTCATGAACAGCTGAAGG 59.513 50.000 23.35 7.43 0.00 3.46
2338 2731 3.144506 ACCAACTCATGAACAGCTGAAG 58.855 45.455 23.35 9.68 0.00 3.02
2339 2732 3.141398 GACCAACTCATGAACAGCTGAA 58.859 45.455 23.35 5.79 0.00 3.02
2340 2733 2.771089 GACCAACTCATGAACAGCTGA 58.229 47.619 23.35 0.00 0.00 4.26
2341 2734 1.462283 CGACCAACTCATGAACAGCTG 59.538 52.381 13.48 13.48 0.00 4.24
2342 2735 1.344438 TCGACCAACTCATGAACAGCT 59.656 47.619 0.00 0.00 0.00 4.24
2343 2736 1.795768 TCGACCAACTCATGAACAGC 58.204 50.000 0.00 0.00 0.00 4.40
2344 2737 2.094894 GCATCGACCAACTCATGAACAG 59.905 50.000 0.00 0.00 0.00 3.16
2345 2738 2.076100 GCATCGACCAACTCATGAACA 58.924 47.619 0.00 0.00 0.00 3.18
2346 2739 1.398390 GGCATCGACCAACTCATGAAC 59.602 52.381 0.00 0.00 0.00 3.18
2347 2740 1.737838 GGCATCGACCAACTCATGAA 58.262 50.000 0.00 0.00 0.00 2.57
2348 2741 0.460109 CGGCATCGACCAACTCATGA 60.460 55.000 0.00 0.00 39.00 3.07
2349 2742 0.460109 TCGGCATCGACCAACTCATG 60.460 55.000 0.00 0.00 40.88 3.07
2350 2743 0.249120 TTCGGCATCGACCAACTCAT 59.751 50.000 0.00 0.00 45.92 2.90
2351 2744 0.249120 ATTCGGCATCGACCAACTCA 59.751 50.000 0.00 0.00 45.92 3.41
2352 2745 1.369625 AATTCGGCATCGACCAACTC 58.630 50.000 0.00 0.00 45.92 3.01
2353 2746 1.468520 CAAATTCGGCATCGACCAACT 59.531 47.619 0.00 0.00 45.92 3.16
2354 2747 1.199097 ACAAATTCGGCATCGACCAAC 59.801 47.619 0.00 0.00 45.92 3.77
2355 2748 1.529226 ACAAATTCGGCATCGACCAA 58.471 45.000 0.00 0.00 45.92 3.67
2356 2749 1.198867 CAACAAATTCGGCATCGACCA 59.801 47.619 0.00 0.00 45.92 4.02
2357 2750 1.466950 TCAACAAATTCGGCATCGACC 59.533 47.619 0.00 0.00 45.92 4.79
2358 2751 2.892373 TCAACAAATTCGGCATCGAC 57.108 45.000 0.00 0.00 45.92 4.20
2359 2752 2.477694 GCATCAACAAATTCGGCATCGA 60.478 45.455 0.00 0.00 44.44 3.59
2360 2753 1.847999 GCATCAACAAATTCGGCATCG 59.152 47.619 0.00 0.00 37.82 3.84
2361 2754 2.878580 TGCATCAACAAATTCGGCATC 58.121 42.857 0.00 0.00 0.00 3.91
2362 2755 3.530265 ATGCATCAACAAATTCGGCAT 57.470 38.095 0.00 0.00 35.83 4.40
2363 2756 3.316071 AATGCATCAACAAATTCGGCA 57.684 38.095 0.00 0.00 0.00 5.69
2364 2757 5.776519 TTAAATGCATCAACAAATTCGGC 57.223 34.783 0.00 0.00 0.00 5.54
2370 2763 9.995003 AGGAGTTTATTTAAATGCATCAACAAA 57.005 25.926 11.05 0.00 0.00 2.83
2371 2764 9.638239 GAGGAGTTTATTTAAATGCATCAACAA 57.362 29.630 11.05 0.00 0.00 2.83
2372 2765 8.801299 TGAGGAGTTTATTTAAATGCATCAACA 58.199 29.630 11.05 5.37 0.00 3.33
2373 2766 9.638239 TTGAGGAGTTTATTTAAATGCATCAAC 57.362 29.630 11.05 6.08 32.50 3.18
2378 2771 9.421806 CACATTTGAGGAGTTTATTTAAATGCA 57.578 29.630 11.05 0.00 37.48 3.96
2379 2772 8.872845 CCACATTTGAGGAGTTTATTTAAATGC 58.127 33.333 11.05 1.65 37.48 3.56
2380 2773 9.927668 ACCACATTTGAGGAGTTTATTTAAATG 57.072 29.630 11.05 0.00 38.98 2.32
2382 2775 9.757227 CAACCACATTTGAGGAGTTTATTTAAA 57.243 29.630 0.80 0.00 0.00 1.52
2383 2776 8.364142 CCAACCACATTTGAGGAGTTTATTTAA 58.636 33.333 0.80 0.00 0.00 1.52
2384 2777 7.726291 TCCAACCACATTTGAGGAGTTTATTTA 59.274 33.333 0.80 0.00 0.00 1.40
2385 2778 6.553100 TCCAACCACATTTGAGGAGTTTATTT 59.447 34.615 0.80 0.00 0.00 1.40
2386 2779 6.074648 TCCAACCACATTTGAGGAGTTTATT 58.925 36.000 0.80 0.00 0.00 1.40
2387 2780 5.640147 TCCAACCACATTTGAGGAGTTTAT 58.360 37.500 0.80 0.00 0.00 1.40
2388 2781 5.055265 TCCAACCACATTTGAGGAGTTTA 57.945 39.130 0.80 0.00 0.00 2.01
2389 2782 3.909732 TCCAACCACATTTGAGGAGTTT 58.090 40.909 0.80 0.00 0.00 2.66
2390 2783 3.593442 TCCAACCACATTTGAGGAGTT 57.407 42.857 0.80 0.00 0.00 3.01
2391 2784 3.814504 ATCCAACCACATTTGAGGAGT 57.185 42.857 0.80 0.00 0.00 3.85
2392 2785 4.157289 CAGAATCCAACCACATTTGAGGAG 59.843 45.833 0.80 0.00 0.00 3.69
2393 2786 4.081406 CAGAATCCAACCACATTTGAGGA 58.919 43.478 0.80 0.00 0.00 3.71
2394 2787 3.194116 CCAGAATCCAACCACATTTGAGG 59.806 47.826 0.00 0.00 0.00 3.86
2395 2788 3.828451 ACCAGAATCCAACCACATTTGAG 59.172 43.478 0.00 0.00 0.00 3.02
2396 2789 3.843422 ACCAGAATCCAACCACATTTGA 58.157 40.909 0.00 0.00 0.00 2.69
2397 2790 4.559153 GAACCAGAATCCAACCACATTTG 58.441 43.478 0.00 0.00 0.00 2.32
2398 2791 3.255642 CGAACCAGAATCCAACCACATTT 59.744 43.478 0.00 0.00 0.00 2.32
2399 2792 2.819608 CGAACCAGAATCCAACCACATT 59.180 45.455 0.00 0.00 0.00 2.71
2400 2793 2.039746 TCGAACCAGAATCCAACCACAT 59.960 45.455 0.00 0.00 0.00 3.21
2401 2794 1.418264 TCGAACCAGAATCCAACCACA 59.582 47.619 0.00 0.00 0.00 4.17
2402 2795 2.178912 TCGAACCAGAATCCAACCAC 57.821 50.000 0.00 0.00 0.00 4.16
2403 2796 2.940994 TTCGAACCAGAATCCAACCA 57.059 45.000 0.00 0.00 0.00 3.67
2404 2797 3.146847 ACTTTCGAACCAGAATCCAACC 58.853 45.455 0.00 0.00 0.00 3.77
2405 2798 4.274950 TCAACTTTCGAACCAGAATCCAAC 59.725 41.667 0.00 0.00 0.00 3.77
2406 2799 4.456535 TCAACTTTCGAACCAGAATCCAA 58.543 39.130 0.00 0.00 0.00 3.53
2407 2800 4.079980 TCAACTTTCGAACCAGAATCCA 57.920 40.909 0.00 0.00 0.00 3.41
2408 2801 5.294552 CCTATCAACTTTCGAACCAGAATCC 59.705 44.000 0.00 0.00 0.00 3.01
2409 2802 6.106673 TCCTATCAACTTTCGAACCAGAATC 58.893 40.000 0.00 0.00 0.00 2.52
2410 2803 6.049955 TCCTATCAACTTTCGAACCAGAAT 57.950 37.500 0.00 0.00 0.00 2.40
2411 2804 5.477607 TCCTATCAACTTTCGAACCAGAA 57.522 39.130 0.00 0.00 0.00 3.02
2412 2805 5.186992 TGATCCTATCAACTTTCGAACCAGA 59.813 40.000 0.00 0.00 36.11 3.86
2413 2806 5.292101 GTGATCCTATCAACTTTCGAACCAG 59.708 44.000 0.00 0.00 41.69 4.00
2414 2807 5.175859 GTGATCCTATCAACTTTCGAACCA 58.824 41.667 0.00 0.00 41.69 3.67
2415 2808 4.571176 GGTGATCCTATCAACTTTCGAACC 59.429 45.833 0.00 0.00 43.61 3.62
2416 2809 4.571176 GGGTGATCCTATCAACTTTCGAAC 59.429 45.833 0.00 0.00 46.18 3.95
2417 2810 4.224147 TGGGTGATCCTATCAACTTTCGAA 59.776 41.667 5.03 0.00 46.18 3.71
2418 2811 3.772572 TGGGTGATCCTATCAACTTTCGA 59.227 43.478 5.03 0.00 46.18 3.71
2419 2812 4.137116 TGGGTGATCCTATCAACTTTCG 57.863 45.455 5.03 0.00 46.18 3.46
2420 2813 5.440610 ACATGGGTGATCCTATCAACTTTC 58.559 41.667 5.03 0.00 46.18 2.62
2421 2814 5.456921 ACATGGGTGATCCTATCAACTTT 57.543 39.130 5.03 0.00 46.18 2.66
2422 2815 5.192522 AGAACATGGGTGATCCTATCAACTT 59.807 40.000 5.03 0.00 46.18 2.66
2423 2816 4.723789 AGAACATGGGTGATCCTATCAACT 59.276 41.667 5.03 0.00 46.18 3.16
2424 2817 5.041191 AGAACATGGGTGATCCTATCAAC 57.959 43.478 0.00 0.00 46.22 3.18
2425 2818 4.721274 TGAGAACATGGGTGATCCTATCAA 59.279 41.667 0.00 0.00 41.69 2.57
2426 2819 4.297768 TGAGAACATGGGTGATCCTATCA 58.702 43.478 0.00 0.00 32.46 2.15
2427 2820 4.963318 TGAGAACATGGGTGATCCTATC 57.037 45.455 0.00 0.00 32.46 2.08
2428 2821 5.715439 TTTGAGAACATGGGTGATCCTAT 57.285 39.130 0.00 0.00 35.23 2.57
2429 2822 5.715439 ATTTGAGAACATGGGTGATCCTA 57.285 39.130 0.00 0.00 36.20 2.94
2430 2823 4.598036 ATTTGAGAACATGGGTGATCCT 57.402 40.909 0.00 0.00 36.20 3.24
2431 2824 4.952335 AGAATTTGAGAACATGGGTGATCC 59.048 41.667 0.00 0.00 0.00 3.36
2432 2825 7.050377 TCTAGAATTTGAGAACATGGGTGATC 58.950 38.462 0.00 0.00 0.00 2.92
2433 2826 6.962182 TCTAGAATTTGAGAACATGGGTGAT 58.038 36.000 0.00 0.00 0.00 3.06
2434 2827 6.013379 ACTCTAGAATTTGAGAACATGGGTGA 60.013 38.462 0.00 0.00 34.65 4.02
2435 2828 6.176183 ACTCTAGAATTTGAGAACATGGGTG 58.824 40.000 0.00 0.00 34.65 4.61
2436 2829 6.380079 ACTCTAGAATTTGAGAACATGGGT 57.620 37.500 0.00 0.00 34.65 4.51
2437 2830 6.404074 GCAACTCTAGAATTTGAGAACATGGG 60.404 42.308 15.06 0.00 34.65 4.00
2438 2831 6.404074 GGCAACTCTAGAATTTGAGAACATGG 60.404 42.308 15.06 0.00 34.65 3.66
2439 2832 6.549952 GGCAACTCTAGAATTTGAGAACATG 58.450 40.000 15.06 0.00 34.65 3.21
2440 2833 5.352569 CGGCAACTCTAGAATTTGAGAACAT 59.647 40.000 15.06 0.00 34.65 2.71
2441 2834 4.690748 CGGCAACTCTAGAATTTGAGAACA 59.309 41.667 15.06 0.00 34.65 3.18
2442 2835 4.436183 GCGGCAACTCTAGAATTTGAGAAC 60.436 45.833 15.06 4.19 34.65 3.01
2443 2836 3.684788 GCGGCAACTCTAGAATTTGAGAA 59.315 43.478 15.06 0.00 34.65 2.87
2444 2837 3.262420 GCGGCAACTCTAGAATTTGAGA 58.738 45.455 15.06 1.73 34.65 3.27
2445 2838 2.029728 CGCGGCAACTCTAGAATTTGAG 59.970 50.000 15.06 9.97 36.47 3.02
2446 2839 1.999735 CGCGGCAACTCTAGAATTTGA 59.000 47.619 15.06 0.00 0.00 2.69
2447 2840 1.999735 TCGCGGCAACTCTAGAATTTG 59.000 47.619 6.13 8.73 0.00 2.32
2448 2841 2.000447 GTCGCGGCAACTCTAGAATTT 59.000 47.619 5.47 0.00 0.00 1.82
2449 2842 1.067142 TGTCGCGGCAACTCTAGAATT 60.067 47.619 12.88 0.00 0.00 2.17
2450 2843 0.530744 TGTCGCGGCAACTCTAGAAT 59.469 50.000 12.88 0.00 0.00 2.40
2451 2844 0.530744 ATGTCGCGGCAACTCTAGAA 59.469 50.000 21.03 0.00 0.00 2.10
2452 2845 0.100682 GATGTCGCGGCAACTCTAGA 59.899 55.000 21.03 0.00 0.00 2.43
2453 2846 1.202973 CGATGTCGCGGCAACTCTAG 61.203 60.000 21.03 0.00 0.00 2.43
2454 2847 1.226575 CGATGTCGCGGCAACTCTA 60.227 57.895 21.03 0.00 0.00 2.43
2455 2848 2.507102 CGATGTCGCGGCAACTCT 60.507 61.111 21.03 0.00 0.00 3.24
2456 2849 2.789203 GACGATGTCGCGGCAACTC 61.789 63.158 21.03 11.46 44.43 3.01
2457 2850 2.809601 GACGATGTCGCGGCAACT 60.810 61.111 21.03 0.11 44.43 3.16
2461 2854 3.248171 GAGTGACGATGTCGCGGC 61.248 66.667 2.29 2.29 46.23 6.53
2462 2855 1.583967 GAGAGTGACGATGTCGCGG 60.584 63.158 6.13 0.00 46.23 6.46
2463 2856 0.248255 ATGAGAGTGACGATGTCGCG 60.248 55.000 0.00 0.00 46.23 5.87
2464 2857 1.471964 GATGAGAGTGACGATGTCGC 58.528 55.000 1.77 2.39 44.43 5.19
2465 2858 1.673400 AGGATGAGAGTGACGATGTCG 59.327 52.381 0.11 0.11 46.33 4.35
2466 2859 2.286713 CGAGGATGAGAGTGACGATGTC 60.287 54.545 0.00 0.00 0.00 3.06
2467 2860 1.673400 CGAGGATGAGAGTGACGATGT 59.327 52.381 0.00 0.00 0.00 3.06
2468 2861 1.943340 TCGAGGATGAGAGTGACGATG 59.057 52.381 0.00 0.00 0.00 3.84
2469 2862 1.944024 GTCGAGGATGAGAGTGACGAT 59.056 52.381 0.00 0.00 0.00 3.73
2470 2863 1.370609 GTCGAGGATGAGAGTGACGA 58.629 55.000 0.00 0.00 0.00 4.20
2471 2864 0.026933 CGTCGAGGATGAGAGTGACG 59.973 60.000 0.00 0.00 42.37 4.35
2472 2865 1.370609 TCGTCGAGGATGAGAGTGAC 58.629 55.000 3.17 0.00 0.00 3.67
2473 2866 2.214347 GATCGTCGAGGATGAGAGTGA 58.786 52.381 24.24 0.00 30.72 3.41
2474 2867 1.943340 TGATCGTCGAGGATGAGAGTG 59.057 52.381 24.24 0.00 30.72 3.51
2475 2868 2.333688 TGATCGTCGAGGATGAGAGT 57.666 50.000 24.24 0.55 30.72 3.24
2476 2869 5.106357 ACAATATGATCGTCGAGGATGAGAG 60.106 44.000 24.24 11.48 30.72 3.20
2477 2870 4.762251 ACAATATGATCGTCGAGGATGAGA 59.238 41.667 24.24 14.42 30.72 3.27
2478 2871 4.855937 CACAATATGATCGTCGAGGATGAG 59.144 45.833 24.24 7.54 30.72 2.90
2479 2872 4.798574 CACAATATGATCGTCGAGGATGA 58.201 43.478 24.24 17.06 31.82 2.92
2480 2873 3.366121 GCACAATATGATCGTCGAGGATG 59.634 47.826 24.24 13.04 0.00 3.51
2481 2874 3.005791 TGCACAATATGATCGTCGAGGAT 59.994 43.478 19.89 19.89 0.00 3.24
2482 2875 2.360801 TGCACAATATGATCGTCGAGGA 59.639 45.455 10.66 10.66 0.00 3.71
2483 2876 2.742774 TGCACAATATGATCGTCGAGG 58.257 47.619 0.00 0.00 0.00 4.63
2484 2877 3.983344 TCATGCACAATATGATCGTCGAG 59.017 43.478 0.00 0.00 30.03 4.04
2485 2878 3.976169 TCATGCACAATATGATCGTCGA 58.024 40.909 0.00 0.00 30.03 4.20
2486 2879 4.879067 GATCATGCACAATATGATCGTCG 58.121 43.478 10.59 0.00 46.22 5.12
2491 2884 7.548967 TGTTGTTTGATCATGCACAATATGAT 58.451 30.769 15.08 0.00 45.35 2.45
2492 2885 6.921914 TGTTGTTTGATCATGCACAATATGA 58.078 32.000 15.08 0.00 38.76 2.15
2493 2886 7.276878 ACATGTTGTTTGATCATGCACAATATG 59.723 33.333 28.40 28.40 46.25 1.78
2494 2887 7.324935 ACATGTTGTTTGATCATGCACAATAT 58.675 30.769 15.08 14.70 41.51 1.28
2495 2888 6.689554 ACATGTTGTTTGATCATGCACAATA 58.310 32.000 15.08 13.50 41.51 1.90
2496 2889 5.543714 ACATGTTGTTTGATCATGCACAAT 58.456 33.333 15.08 2.64 41.51 2.71
2497 2890 4.946445 ACATGTTGTTTGATCATGCACAA 58.054 34.783 10.20 10.20 41.51 3.33
2498 2891 4.037684 TGACATGTTGTTTGATCATGCACA 59.962 37.500 0.00 0.00 41.51 4.57
2499 2892 4.548494 TGACATGTTGTTTGATCATGCAC 58.452 39.130 0.00 0.00 41.51 4.57
2500 2893 4.850347 TGACATGTTGTTTGATCATGCA 57.150 36.364 0.00 0.00 41.51 3.96
2501 2894 5.287752 GTGATGACATGTTGTTTGATCATGC 59.712 40.000 0.00 0.00 41.51 4.06
2502 2895 5.803461 GGTGATGACATGTTGTTTGATCATG 59.197 40.000 0.00 0.00 42.86 3.07
2503 2896 5.713389 AGGTGATGACATGTTGTTTGATCAT 59.287 36.000 0.00 0.00 29.62 2.45
2504 2897 5.072055 AGGTGATGACATGTTGTTTGATCA 58.928 37.500 0.00 0.00 0.00 2.92
2505 2898 5.633830 AGGTGATGACATGTTGTTTGATC 57.366 39.130 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.