Multiple sequence alignment - TraesCS2A01G294100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G294100 chr2A 100.000 3370 0 0 1 3370 505207910 505211279 0.000000e+00 6224
1 TraesCS2A01G294100 chr2A 94.487 1832 57 27 654 2468 505080301 505078497 0.000000e+00 2784
2 TraesCS2A01G294100 chr2D 92.480 1835 88 23 657 2468 373750181 373751988 0.000000e+00 2579
3 TraesCS2A01G294100 chr2D 92.422 1821 100 19 656 2468 373654079 373652289 0.000000e+00 2564
4 TraesCS2A01G294100 chr2D 89.898 683 31 14 2554 3211 373751999 373752668 0.000000e+00 845
5 TraesCS2A01G294100 chr2D 84.615 403 45 9 2894 3287 373610712 373610318 5.270000e-103 385
6 TraesCS2A01G294100 chr2D 96.825 63 2 0 3308 3370 373752874 373752936 4.600000e-19 106
7 TraesCS2A01G294100 chr2B 90.481 1975 110 34 657 2604 443223246 443225169 0.000000e+00 2534
8 TraesCS2A01G294100 chr2B 90.751 1838 101 31 657 2468 443148774 443146980 0.000000e+00 2388
9 TraesCS2A01G294100 chr2B 85.360 444 18 12 2777 3201 443232057 443232472 1.870000e-112 416
10 TraesCS2A01G294100 chr2B 84.397 141 9 3 2589 2721 443231900 443232035 3.530000e-25 126
11 TraesCS2A01G294100 chr2B 98.413 63 1 0 3308 3370 443238129 443238191 9.880000e-21 111
12 TraesCS2A01G294100 chr3D 75.360 556 118 15 1492 2036 566081016 566081563 2.010000e-62 250
13 TraesCS2A01G294100 chr3D 88.372 129 12 3 1 128 168423481 168423355 5.820000e-33 152
14 TraesCS2A01G294100 chr3A 75.179 560 114 19 1491 2036 701218937 701218389 1.210000e-59 241
15 TraesCS2A01G294100 chr3B 74.686 557 120 17 1492 2036 755806067 755806614 9.410000e-56 228
16 TraesCS2A01G294100 chr3B 84.677 124 17 2 1 123 256986733 256986855 4.570000e-24 122
17 TraesCS2A01G294100 chr5B 86.923 130 16 1 1 130 204521429 204521301 9.750000e-31 145
18 TraesCS2A01G294100 chr5B 86.719 128 16 1 1 128 697078506 697078380 1.260000e-29 141
19 TraesCS2A01G294100 chrUn 88.000 125 10 4 1 123 31507186 31507307 3.510000e-30 143
20 TraesCS2A01G294100 chr6B 86.154 130 17 1 1 130 333541156 333541028 4.530000e-29 139
21 TraesCS2A01G294100 chr1B 85.821 134 13 6 1 131 8382048 8382178 1.630000e-28 137
22 TraesCS2A01G294100 chr4A 84.733 131 14 6 1 128 143022996 143023123 3.530000e-25 126
23 TraesCS2A01G294100 chr6A 83.206 131 19 3 1 130 232709610 232709482 2.120000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G294100 chr2A 505207910 505211279 3369 False 6224.000000 6224 100.000000 1 3370 1 chr2A.!!$F1 3369
1 TraesCS2A01G294100 chr2A 505078497 505080301 1804 True 2784.000000 2784 94.487000 654 2468 1 chr2A.!!$R1 1814
2 TraesCS2A01G294100 chr2D 373652289 373654079 1790 True 2564.000000 2564 92.422000 656 2468 1 chr2D.!!$R2 1812
3 TraesCS2A01G294100 chr2D 373750181 373752936 2755 False 1176.666667 2579 93.067667 657 3370 3 chr2D.!!$F1 2713
4 TraesCS2A01G294100 chr2B 443223246 443225169 1923 False 2534.000000 2534 90.481000 657 2604 1 chr2B.!!$F1 1947
5 TraesCS2A01G294100 chr2B 443146980 443148774 1794 True 2388.000000 2388 90.751000 657 2468 1 chr2B.!!$R1 1811
6 TraesCS2A01G294100 chr2B 443231900 443232472 572 False 271.000000 416 84.878500 2589 3201 2 chr2B.!!$F3 612
7 TraesCS2A01G294100 chr3D 566081016 566081563 547 False 250.000000 250 75.360000 1492 2036 1 chr3D.!!$F1 544
8 TraesCS2A01G294100 chr3A 701218389 701218937 548 True 241.000000 241 75.179000 1491 2036 1 chr3A.!!$R1 545
9 TraesCS2A01G294100 chr3B 755806067 755806614 547 False 228.000000 228 74.686000 1492 2036 1 chr3B.!!$F2 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 285 0.032678 CGATCGTTGGGGATCAGGAG 59.967 60.0 7.03 0.0 42.35 3.69 F
528 529 0.034283 TGCTATTGCTGGCCACATGA 60.034 50.0 0.00 0.0 40.48 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2258 2307 1.237533 TGAAGCAAAATCAGCTCGCA 58.762 45.0 0.0 0.0 42.53 5.10 R
2517 2588 0.318275 GCTAAGATGGGCTCGACTCG 60.318 60.0 0.0 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.061357 GGGTTTTATCTCTTCGAGAGGG 57.939 50.000 10.65 1.18 42.26 4.30
22 23 3.459145 GGTTTTATCTCTTCGAGAGGGC 58.541 50.000 10.65 0.00 42.26 5.19
23 24 3.459145 GTTTTATCTCTTCGAGAGGGCC 58.541 50.000 0.00 0.00 42.26 5.80
24 25 1.705873 TTATCTCTTCGAGAGGGCCC 58.294 55.000 16.46 16.46 42.26 5.80
25 26 0.537600 TATCTCTTCGAGAGGGCCCG 60.538 60.000 18.44 4.06 42.26 6.13
26 27 2.285889 ATCTCTTCGAGAGGGCCCGA 62.286 60.000 18.44 6.98 42.26 5.14
27 28 2.036731 TCTTCGAGAGGGCCCGAA 59.963 61.111 18.44 15.13 41.71 4.30
28 29 2.184579 CTTCGAGAGGGCCCGAAC 59.815 66.667 18.44 12.45 39.49 3.95
29 30 3.372554 CTTCGAGAGGGCCCGAACC 62.373 68.421 18.44 7.31 39.49 3.62
30 31 3.899545 TTCGAGAGGGCCCGAACCT 62.900 63.158 18.44 12.55 39.49 3.50
31 32 4.148825 CGAGAGGGCCCGAACCTG 62.149 72.222 18.44 1.23 38.79 4.00
32 33 3.787001 GAGAGGGCCCGAACCTGG 61.787 72.222 18.44 0.00 38.79 4.45
33 34 4.658786 AGAGGGCCCGAACCTGGT 62.659 66.667 18.44 0.00 38.79 4.00
34 35 3.647771 GAGGGCCCGAACCTGGTT 61.648 66.667 18.44 12.82 38.79 3.67
35 36 2.204029 AGGGCCCGAACCTGGTTA 60.204 61.111 18.44 0.00 36.85 2.85
36 37 1.844544 GAGGGCCCGAACCTGGTTAA 61.845 60.000 18.44 0.00 38.79 2.01
37 38 1.075305 GGGCCCGAACCTGGTTAAA 59.925 57.895 12.96 0.00 0.00 1.52
38 39 1.246056 GGGCCCGAACCTGGTTAAAC 61.246 60.000 12.96 2.57 0.00 2.01
39 40 0.537828 GGCCCGAACCTGGTTAAACA 60.538 55.000 12.96 0.00 0.00 2.83
40 41 1.541379 GCCCGAACCTGGTTAAACAT 58.459 50.000 12.96 0.00 0.00 2.71
41 42 1.890489 GCCCGAACCTGGTTAAACATT 59.110 47.619 12.96 0.00 0.00 2.71
42 43 2.352323 GCCCGAACCTGGTTAAACATTG 60.352 50.000 12.96 0.00 0.00 2.82
43 44 2.888414 CCCGAACCTGGTTAAACATTGT 59.112 45.455 12.96 0.00 0.00 2.71
44 45 3.057806 CCCGAACCTGGTTAAACATTGTC 60.058 47.826 12.96 0.00 0.00 3.18
45 46 3.818773 CCGAACCTGGTTAAACATTGTCT 59.181 43.478 12.96 0.00 0.00 3.41
46 47 4.083484 CCGAACCTGGTTAAACATTGTCTC 60.083 45.833 12.96 0.00 0.00 3.36
47 48 4.513692 CGAACCTGGTTAAACATTGTCTCA 59.486 41.667 12.96 0.00 0.00 3.27
48 49 5.181245 CGAACCTGGTTAAACATTGTCTCAT 59.819 40.000 12.96 0.00 0.00 2.90
49 50 6.293955 CGAACCTGGTTAAACATTGTCTCATT 60.294 38.462 12.96 0.00 0.00 2.57
50 51 6.575162 ACCTGGTTAAACATTGTCTCATTC 57.425 37.500 0.00 0.00 0.00 2.67
51 52 5.181245 ACCTGGTTAAACATTGTCTCATTCG 59.819 40.000 0.00 0.00 0.00 3.34
52 53 5.181245 CCTGGTTAAACATTGTCTCATTCGT 59.819 40.000 0.00 0.00 0.00 3.85
53 54 6.236017 TGGTTAAACATTGTCTCATTCGTC 57.764 37.500 0.00 0.00 0.00 4.20
54 55 5.995282 TGGTTAAACATTGTCTCATTCGTCT 59.005 36.000 0.00 0.00 0.00 4.18
55 56 6.147164 TGGTTAAACATTGTCTCATTCGTCTC 59.853 38.462 0.00 0.00 0.00 3.36
56 57 6.369065 GGTTAAACATTGTCTCATTCGTCTCT 59.631 38.462 0.00 0.00 0.00 3.10
57 58 7.095187 GGTTAAACATTGTCTCATTCGTCTCTT 60.095 37.037 0.00 0.00 0.00 2.85
58 59 5.852738 AACATTGTCTCATTCGTCTCTTG 57.147 39.130 0.00 0.00 0.00 3.02
59 60 4.887748 ACATTGTCTCATTCGTCTCTTGT 58.112 39.130 0.00 0.00 0.00 3.16
60 61 5.300752 ACATTGTCTCATTCGTCTCTTGTT 58.699 37.500 0.00 0.00 0.00 2.83
61 62 5.406780 ACATTGTCTCATTCGTCTCTTGTTC 59.593 40.000 0.00 0.00 0.00 3.18
62 63 3.914312 TGTCTCATTCGTCTCTTGTTCC 58.086 45.455 0.00 0.00 0.00 3.62
63 64 3.254892 GTCTCATTCGTCTCTTGTTCCC 58.745 50.000 0.00 0.00 0.00 3.97
64 65 2.233922 TCTCATTCGTCTCTTGTTCCCC 59.766 50.000 0.00 0.00 0.00 4.81
65 66 1.974957 TCATTCGTCTCTTGTTCCCCA 59.025 47.619 0.00 0.00 0.00 4.96
66 67 2.571653 TCATTCGTCTCTTGTTCCCCAT 59.428 45.455 0.00 0.00 0.00 4.00
67 68 2.762535 TTCGTCTCTTGTTCCCCATC 57.237 50.000 0.00 0.00 0.00 3.51
68 69 0.530744 TCGTCTCTTGTTCCCCATCG 59.469 55.000 0.00 0.00 0.00 3.84
69 70 0.530744 CGTCTCTTGTTCCCCATCGA 59.469 55.000 0.00 0.00 0.00 3.59
70 71 1.137086 CGTCTCTTGTTCCCCATCGAT 59.863 52.381 0.00 0.00 0.00 3.59
71 72 2.799917 CGTCTCTTGTTCCCCATCGATC 60.800 54.545 0.00 0.00 0.00 3.69
72 73 1.762957 TCTCTTGTTCCCCATCGATCC 59.237 52.381 0.00 0.00 0.00 3.36
73 74 1.486310 CTCTTGTTCCCCATCGATCCA 59.514 52.381 0.00 0.00 0.00 3.41
74 75 1.912731 TCTTGTTCCCCATCGATCCAA 59.087 47.619 0.00 0.00 0.00 3.53
75 76 2.307392 TCTTGTTCCCCATCGATCCAAA 59.693 45.455 0.00 0.00 0.00 3.28
76 77 2.889170 TGTTCCCCATCGATCCAAAA 57.111 45.000 0.00 0.00 0.00 2.44
77 78 3.380471 TGTTCCCCATCGATCCAAAAT 57.620 42.857 0.00 0.00 0.00 1.82
78 79 3.287222 TGTTCCCCATCGATCCAAAATC 58.713 45.455 0.00 0.00 0.00 2.17
79 80 2.623416 GTTCCCCATCGATCCAAAATCC 59.377 50.000 0.00 0.00 0.00 3.01
80 81 1.849692 TCCCCATCGATCCAAAATCCA 59.150 47.619 0.00 0.00 0.00 3.41
81 82 1.956477 CCCCATCGATCCAAAATCCAC 59.044 52.381 0.00 0.00 0.00 4.02
82 83 2.653726 CCCATCGATCCAAAATCCACA 58.346 47.619 0.00 0.00 0.00 4.17
83 84 3.225104 CCCATCGATCCAAAATCCACAT 58.775 45.455 0.00 0.00 0.00 3.21
84 85 3.254166 CCCATCGATCCAAAATCCACATC 59.746 47.826 0.00 0.00 0.00 3.06
85 86 4.139786 CCATCGATCCAAAATCCACATCT 58.860 43.478 0.00 0.00 0.00 2.90
86 87 4.214971 CCATCGATCCAAAATCCACATCTC 59.785 45.833 0.00 0.00 0.00 2.75
87 88 3.457234 TCGATCCAAAATCCACATCTCG 58.543 45.455 0.00 0.00 0.00 4.04
88 89 2.545526 CGATCCAAAATCCACATCTCGG 59.454 50.000 0.00 0.00 0.00 4.63
89 90 2.418368 TCCAAAATCCACATCTCGGG 57.582 50.000 0.00 0.00 0.00 5.14
90 91 1.912731 TCCAAAATCCACATCTCGGGA 59.087 47.619 0.00 0.00 37.64 5.14
91 92 2.017049 CCAAAATCCACATCTCGGGAC 58.983 52.381 0.00 0.00 35.67 4.46
92 93 2.017049 CAAAATCCACATCTCGGGACC 58.983 52.381 0.00 0.00 35.67 4.46
93 94 0.546598 AAATCCACATCTCGGGACCC 59.453 55.000 0.00 0.00 35.67 4.46
94 95 1.345715 AATCCACATCTCGGGACCCC 61.346 60.000 4.46 0.00 35.67 4.95
95 96 3.480133 CCACATCTCGGGACCCCC 61.480 72.222 4.46 0.00 41.09 5.40
96 97 2.365635 CACATCTCGGGACCCCCT 60.366 66.667 4.46 0.00 42.67 4.79
97 98 1.075525 CACATCTCGGGACCCCCTA 60.076 63.158 4.46 0.00 42.67 3.53
98 99 0.471971 CACATCTCGGGACCCCCTAT 60.472 60.000 4.46 0.00 42.67 2.57
99 100 0.178929 ACATCTCGGGACCCCCTATC 60.179 60.000 4.46 0.00 42.67 2.08
100 101 0.905337 CATCTCGGGACCCCCTATCC 60.905 65.000 4.46 0.00 42.67 2.59
101 102 2.442519 ATCTCGGGACCCCCTATCCG 62.443 65.000 4.46 0.00 42.67 4.18
103 104 2.600769 CGGGACCCCCTATCCGAG 60.601 72.222 4.46 0.00 44.69 4.63
104 105 2.940951 GGGACCCCCTATCCGAGA 59.059 66.667 0.00 0.00 41.34 4.04
105 106 1.470165 GGGACCCCCTATCCGAGAT 59.530 63.158 0.00 0.00 41.34 2.75
106 107 0.615261 GGGACCCCCTATCCGAGATC 60.615 65.000 0.00 0.00 41.34 2.75
107 108 0.615261 GGACCCCCTATCCGAGATCC 60.615 65.000 0.00 0.00 0.00 3.36
108 109 0.966370 GACCCCCTATCCGAGATCCG 60.966 65.000 0.00 0.00 38.18 4.18
109 110 2.352032 CCCCCTATCCGAGATCCGC 61.352 68.421 0.00 0.00 36.84 5.54
110 111 2.352032 CCCCTATCCGAGATCCGCC 61.352 68.421 0.00 0.00 36.84 6.13
111 112 2.701780 CCCTATCCGAGATCCGCCG 61.702 68.421 0.00 0.00 36.84 6.46
112 113 1.674651 CCTATCCGAGATCCGCCGA 60.675 63.158 0.00 0.00 36.84 5.54
113 114 1.032657 CCTATCCGAGATCCGCCGAT 61.033 60.000 0.00 0.00 36.84 4.18
114 115 0.811915 CTATCCGAGATCCGCCGATT 59.188 55.000 0.00 0.00 36.84 3.34
115 116 1.202582 CTATCCGAGATCCGCCGATTT 59.797 52.381 0.00 0.00 36.84 2.17
116 117 0.393077 ATCCGAGATCCGCCGATTTT 59.607 50.000 0.00 0.00 36.84 1.82
117 118 0.177141 TCCGAGATCCGCCGATTTTT 59.823 50.000 0.00 0.00 36.84 1.94
118 119 0.304705 CCGAGATCCGCCGATTTTTG 59.695 55.000 0.00 0.00 36.84 2.44
119 120 1.286501 CGAGATCCGCCGATTTTTGA 58.713 50.000 0.00 0.00 0.00 2.69
120 121 1.004927 CGAGATCCGCCGATTTTTGAC 60.005 52.381 0.00 0.00 0.00 3.18
121 122 2.006888 GAGATCCGCCGATTTTTGACA 58.993 47.619 0.00 0.00 0.00 3.58
122 123 1.737793 AGATCCGCCGATTTTTGACAC 59.262 47.619 0.00 0.00 0.00 3.67
123 124 1.737793 GATCCGCCGATTTTTGACACT 59.262 47.619 0.00 0.00 0.00 3.55
124 125 0.871722 TCCGCCGATTTTTGACACTG 59.128 50.000 0.00 0.00 0.00 3.66
125 126 0.871722 CCGCCGATTTTTGACACTGA 59.128 50.000 0.00 0.00 0.00 3.41
126 127 1.399727 CCGCCGATTTTTGACACTGAC 60.400 52.381 0.00 0.00 0.00 3.51
127 128 1.262950 CGCCGATTTTTGACACTGACA 59.737 47.619 0.00 0.00 0.00 3.58
128 129 2.650608 GCCGATTTTTGACACTGACAC 58.349 47.619 0.00 0.00 0.00 3.67
129 130 2.604614 GCCGATTTTTGACACTGACACC 60.605 50.000 0.00 0.00 0.00 4.16
130 131 2.349438 CCGATTTTTGACACTGACACCG 60.349 50.000 0.00 0.00 0.00 4.94
131 132 2.349438 CGATTTTTGACACTGACACCGG 60.349 50.000 0.00 0.00 0.00 5.28
132 133 0.736053 TTTTTGACACTGACACCGGC 59.264 50.000 0.00 0.00 0.00 6.13
133 134 1.098712 TTTTGACACTGACACCGGCC 61.099 55.000 0.00 0.00 0.00 6.13
134 135 3.800685 TTGACACTGACACCGGCCG 62.801 63.158 21.04 21.04 0.00 6.13
145 146 4.787286 CCGGCCGCCATGGTTGTA 62.787 66.667 22.85 0.00 41.21 2.41
146 147 3.202001 CGGCCGCCATGGTTGTAG 61.202 66.667 14.67 0.00 41.21 2.74
147 148 3.518068 GGCCGCCATGGTTGTAGC 61.518 66.667 14.67 9.13 41.21 3.58
148 149 2.749839 GCCGCCATGGTTGTAGCA 60.750 61.111 14.67 0.00 41.21 3.49
149 150 3.051392 GCCGCCATGGTTGTAGCAC 62.051 63.158 14.67 0.00 41.21 4.40
150 151 2.406616 CCGCCATGGTTGTAGCACC 61.407 63.158 14.67 0.00 37.34 5.01
151 152 2.749865 CGCCATGGTTGTAGCACCG 61.750 63.158 14.67 0.49 40.09 4.94
152 153 2.406616 GCCATGGTTGTAGCACCGG 61.407 63.158 14.67 0.00 40.09 5.28
153 154 1.748879 CCATGGTTGTAGCACCGGG 60.749 63.158 6.32 0.00 40.09 5.73
154 155 1.748879 CATGGTTGTAGCACCGGGG 60.749 63.158 6.32 0.84 40.09 5.73
155 156 3.638592 ATGGTTGTAGCACCGGGGC 62.639 63.158 24.88 24.88 40.09 5.80
156 157 4.338710 GGTTGTAGCACCGGGGCA 62.339 66.667 34.08 14.77 35.83 5.36
157 158 3.053896 GTTGTAGCACCGGGGCAC 61.054 66.667 34.08 25.92 35.83 5.01
170 171 3.637273 GGCACCTCGGTTCCCAGT 61.637 66.667 0.00 0.00 0.00 4.00
171 172 2.358737 GCACCTCGGTTCCCAGTG 60.359 66.667 0.00 0.00 0.00 3.66
172 173 3.148084 CACCTCGGTTCCCAGTGT 58.852 61.111 0.00 0.00 0.00 3.55
173 174 1.004918 CACCTCGGTTCCCAGTGTC 60.005 63.158 0.00 0.00 0.00 3.67
174 175 1.152312 ACCTCGGTTCCCAGTGTCT 60.152 57.895 0.00 0.00 0.00 3.41
175 176 1.293498 CCTCGGTTCCCAGTGTCTG 59.707 63.158 0.00 0.00 0.00 3.51
198 199 4.999939 CCGCCGGTTGCAGCAAAC 63.000 66.667 13.68 13.68 41.33 2.93
199 200 4.263209 CGCCGGTTGCAGCAAACA 62.263 61.111 23.02 0.00 41.33 2.83
200 201 2.105930 GCCGGTTGCAGCAAACAA 59.894 55.556 23.02 0.00 40.77 2.83
201 202 2.237066 GCCGGTTGCAGCAAACAAC 61.237 57.895 23.02 10.17 45.30 3.32
202 203 1.437160 CCGGTTGCAGCAAACAACT 59.563 52.632 23.02 0.00 45.34 3.16
203 204 0.179113 CCGGTTGCAGCAAACAACTT 60.179 50.000 23.02 0.00 45.34 2.66
204 205 1.066303 CCGGTTGCAGCAAACAACTTA 59.934 47.619 23.02 0.00 45.34 2.24
205 206 2.288152 CCGGTTGCAGCAAACAACTTAT 60.288 45.455 23.02 0.00 45.34 1.73
206 207 2.725723 CGGTTGCAGCAAACAACTTATG 59.274 45.455 23.02 0.74 45.34 1.90
207 208 3.059166 GGTTGCAGCAAACAACTTATGG 58.941 45.455 18.82 0.00 45.34 2.74
208 209 3.492482 GGTTGCAGCAAACAACTTATGGT 60.492 43.478 18.82 0.00 45.34 3.55
209 210 4.119136 GTTGCAGCAAACAACTTATGGTT 58.881 39.130 10.11 0.00 43.23 3.67
210 211 3.976169 TGCAGCAAACAACTTATGGTTC 58.024 40.909 0.00 0.00 36.60 3.62
211 212 3.243704 TGCAGCAAACAACTTATGGTTCC 60.244 43.478 0.00 0.00 36.60 3.62
212 213 3.243704 GCAGCAAACAACTTATGGTTCCA 60.244 43.478 0.00 0.00 36.60 3.53
213 214 4.549458 CAGCAAACAACTTATGGTTCCAG 58.451 43.478 0.00 0.00 36.60 3.86
214 215 3.005791 AGCAAACAACTTATGGTTCCAGC 59.994 43.478 0.00 0.00 36.60 4.85
215 216 3.243704 GCAAACAACTTATGGTTCCAGCA 60.244 43.478 0.00 0.00 36.60 4.41
216 217 4.561326 GCAAACAACTTATGGTTCCAGCAT 60.561 41.667 0.00 0.00 36.60 3.79
217 218 5.163513 CAAACAACTTATGGTTCCAGCATC 58.836 41.667 0.00 0.00 36.60 3.91
218 219 3.009723 ACAACTTATGGTTCCAGCATCG 58.990 45.455 0.00 0.00 37.51 3.84
219 220 1.668419 ACTTATGGTTCCAGCATCGC 58.332 50.000 0.00 0.00 37.51 4.58
220 221 0.947244 CTTATGGTTCCAGCATCGCC 59.053 55.000 0.00 0.00 37.51 5.54
221 222 0.813610 TTATGGTTCCAGCATCGCCG 60.814 55.000 0.00 0.00 37.51 6.46
222 223 1.966901 TATGGTTCCAGCATCGCCGT 61.967 55.000 0.00 0.00 37.51 5.68
223 224 1.966901 ATGGTTCCAGCATCGCCGTA 61.967 55.000 0.00 0.00 28.87 4.02
224 225 2.171725 GGTTCCAGCATCGCCGTAC 61.172 63.158 0.00 0.00 0.00 3.67
225 226 2.202690 TTCCAGCATCGCCGTACG 60.203 61.111 8.69 8.69 45.62 3.67
226 227 4.865761 TCCAGCATCGCCGTACGC 62.866 66.667 10.49 4.62 43.23 4.42
235 236 4.575245 GCCGTACGCGCAATGCTC 62.575 66.667 19.50 0.00 43.27 4.26
236 237 2.885644 CCGTACGCGCAATGCTCT 60.886 61.111 10.49 0.00 43.27 4.09
237 238 2.452813 CCGTACGCGCAATGCTCTT 61.453 57.895 10.49 0.00 43.27 2.85
238 239 1.296145 CGTACGCGCAATGCTCTTG 60.296 57.895 5.73 0.00 43.27 3.02
239 240 1.581147 GTACGCGCAATGCTCTTGC 60.581 57.895 5.73 12.75 43.27 4.01
240 241 1.741401 TACGCGCAATGCTCTTGCT 60.741 52.632 5.73 6.55 42.87 3.91
241 242 0.459411 TACGCGCAATGCTCTTGCTA 60.459 50.000 5.73 5.78 42.87 3.49
242 243 1.091771 ACGCGCAATGCTCTTGCTAT 61.092 50.000 5.73 5.19 42.87 2.97
243 244 0.383983 CGCGCAATGCTCTTGCTATC 60.384 55.000 8.75 9.28 42.87 2.08
244 245 0.383983 GCGCAATGCTCTTGCTATCG 60.384 55.000 18.21 7.54 42.87 2.92
245 246 0.933097 CGCAATGCTCTTGCTATCGT 59.067 50.000 18.21 0.00 42.87 3.73
246 247 1.332640 CGCAATGCTCTTGCTATCGTG 60.333 52.381 18.21 3.01 42.87 4.35
247 248 1.667724 GCAATGCTCTTGCTATCGTGT 59.332 47.619 14.77 0.00 41.87 4.49
248 249 2.096496 GCAATGCTCTTGCTATCGTGTT 59.904 45.455 14.77 0.00 41.87 3.32
249 250 3.786818 GCAATGCTCTTGCTATCGTGTTC 60.787 47.826 14.77 0.00 41.87 3.18
250 251 2.741759 TGCTCTTGCTATCGTGTTCA 57.258 45.000 0.00 0.00 40.48 3.18
251 252 3.251479 TGCTCTTGCTATCGTGTTCAT 57.749 42.857 0.00 0.00 40.48 2.57
252 253 3.190079 TGCTCTTGCTATCGTGTTCATC 58.810 45.455 0.00 0.00 40.48 2.92
253 254 3.118992 TGCTCTTGCTATCGTGTTCATCT 60.119 43.478 0.00 0.00 40.48 2.90
254 255 3.489047 GCTCTTGCTATCGTGTTCATCTC 59.511 47.826 0.00 0.00 36.03 2.75
255 256 4.736168 GCTCTTGCTATCGTGTTCATCTCT 60.736 45.833 0.00 0.00 36.03 3.10
256 257 5.506483 GCTCTTGCTATCGTGTTCATCTCTA 60.506 44.000 0.00 0.00 36.03 2.43
257 258 6.066054 TCTTGCTATCGTGTTCATCTCTAG 57.934 41.667 0.00 0.00 0.00 2.43
258 259 5.590663 TCTTGCTATCGTGTTCATCTCTAGT 59.409 40.000 0.00 0.00 0.00 2.57
259 260 5.175090 TGCTATCGTGTTCATCTCTAGTG 57.825 43.478 0.00 0.00 0.00 2.74
260 261 4.881850 TGCTATCGTGTTCATCTCTAGTGA 59.118 41.667 0.00 0.00 0.00 3.41
261 262 5.008118 TGCTATCGTGTTCATCTCTAGTGAG 59.992 44.000 0.50 0.00 41.51 3.51
274 275 2.937149 TCTAGTGAGAGACGATCGTTGG 59.063 50.000 23.63 6.54 0.00 3.77
275 276 0.811915 AGTGAGAGACGATCGTTGGG 59.188 55.000 23.63 0.00 0.00 4.12
276 277 0.179134 GTGAGAGACGATCGTTGGGG 60.179 60.000 23.63 0.00 0.00 4.96
277 278 0.323087 TGAGAGACGATCGTTGGGGA 60.323 55.000 23.63 4.16 0.00 4.81
278 279 1.033574 GAGAGACGATCGTTGGGGAT 58.966 55.000 23.63 5.66 0.00 3.85
279 280 1.001158 GAGAGACGATCGTTGGGGATC 60.001 57.143 23.63 13.05 39.53 3.36
280 281 0.744874 GAGACGATCGTTGGGGATCA 59.255 55.000 23.63 0.00 42.35 2.92
281 282 0.747255 AGACGATCGTTGGGGATCAG 59.253 55.000 23.63 0.00 42.35 2.90
282 283 0.249489 GACGATCGTTGGGGATCAGG 60.249 60.000 23.63 0.00 42.35 3.86
283 284 0.686441 ACGATCGTTGGGGATCAGGA 60.686 55.000 16.60 0.00 42.35 3.86
284 285 0.032678 CGATCGTTGGGGATCAGGAG 59.967 60.000 7.03 0.00 42.35 3.69
285 286 1.414158 GATCGTTGGGGATCAGGAGA 58.586 55.000 0.00 0.00 41.93 3.71
286 287 1.974236 GATCGTTGGGGATCAGGAGAT 59.026 52.381 0.00 0.00 41.93 2.75
295 296 3.139810 ATCAGGAGATCAGGACCCG 57.860 57.895 0.00 0.00 0.00 5.28
296 297 0.263172 ATCAGGAGATCAGGACCCGT 59.737 55.000 0.00 0.00 0.00 5.28
297 298 0.684479 TCAGGAGATCAGGACCCGTG 60.684 60.000 0.00 0.00 0.00 4.94
298 299 0.684479 CAGGAGATCAGGACCCGTGA 60.684 60.000 0.00 0.00 0.00 4.35
299 300 0.396417 AGGAGATCAGGACCCGTGAG 60.396 60.000 0.00 0.00 0.00 3.51
300 301 1.439644 GAGATCAGGACCCGTGAGC 59.560 63.158 0.00 0.00 0.00 4.26
301 302 2.105128 GATCAGGACCCGTGAGCG 59.895 66.667 0.00 0.00 37.95 5.03
302 303 2.680352 ATCAGGACCCGTGAGCGT 60.680 61.111 0.00 0.00 36.15 5.07
303 304 2.615262 GATCAGGACCCGTGAGCGTC 62.615 65.000 0.00 0.00 36.15 5.19
304 305 4.778415 CAGGACCCGTGAGCGTCG 62.778 72.222 0.00 0.00 36.15 5.12
307 308 4.773117 GACCCGTGAGCGTCGGTC 62.773 72.222 17.29 17.29 45.63 4.79
309 310 4.129737 CCCGTGAGCGTCGGTCAT 62.130 66.667 27.85 0.00 45.63 3.06
310 311 2.126071 CCGTGAGCGTCGGTCATT 60.126 61.111 27.85 0.00 42.05 2.57
311 312 2.444624 CCGTGAGCGTCGGTCATTG 61.445 63.158 27.85 22.03 42.05 2.82
312 313 2.444624 CGTGAGCGTCGGTCATTGG 61.445 63.158 27.85 16.97 42.05 3.16
313 314 1.080093 GTGAGCGTCGGTCATTGGA 60.080 57.895 27.85 3.86 42.05 3.53
314 315 1.078759 GTGAGCGTCGGTCATTGGAG 61.079 60.000 27.85 0.00 42.05 3.86
315 316 1.248101 TGAGCGTCGGTCATTGGAGA 61.248 55.000 22.39 0.00 35.04 3.71
316 317 0.526524 GAGCGTCGGTCATTGGAGAG 60.527 60.000 19.05 0.00 0.00 3.20
317 318 0.965866 AGCGTCGGTCATTGGAGAGA 60.966 55.000 0.00 0.00 0.00 3.10
318 319 0.108804 GCGTCGGTCATTGGAGAGAA 60.109 55.000 0.00 0.00 0.00 2.87
319 320 1.671850 GCGTCGGTCATTGGAGAGAAA 60.672 52.381 0.00 0.00 0.00 2.52
320 321 2.683968 CGTCGGTCATTGGAGAGAAAA 58.316 47.619 0.00 0.00 0.00 2.29
321 322 3.064207 CGTCGGTCATTGGAGAGAAAAA 58.936 45.455 0.00 0.00 0.00 1.94
341 342 5.388599 AAAAAGGACAGGGAAAAGAGAGA 57.611 39.130 0.00 0.00 0.00 3.10
342 343 4.632327 AAAGGACAGGGAAAAGAGAGAG 57.368 45.455 0.00 0.00 0.00 3.20
343 344 3.551635 AGGACAGGGAAAAGAGAGAGA 57.448 47.619 0.00 0.00 0.00 3.10
344 345 4.073425 AGGACAGGGAAAAGAGAGAGAT 57.927 45.455 0.00 0.00 0.00 2.75
345 346 4.030216 AGGACAGGGAAAAGAGAGAGATC 58.970 47.826 0.00 0.00 0.00 2.75
346 347 4.030216 GGACAGGGAAAAGAGAGAGATCT 58.970 47.826 0.00 0.00 0.00 2.75
347 348 4.141959 GGACAGGGAAAAGAGAGAGATCTG 60.142 50.000 0.00 0.00 0.00 2.90
348 349 4.424842 ACAGGGAAAAGAGAGAGATCTGT 58.575 43.478 0.00 0.00 0.00 3.41
349 350 4.843516 ACAGGGAAAAGAGAGAGATCTGTT 59.156 41.667 0.00 0.00 29.96 3.16
350 351 5.046663 ACAGGGAAAAGAGAGAGATCTGTTC 60.047 44.000 0.00 0.00 41.17 3.18
351 352 4.159506 AGGGAAAAGAGAGAGATCTGTTCG 59.840 45.833 0.00 0.00 42.31 3.95
352 353 4.429108 GGAAAAGAGAGAGATCTGTTCGG 58.571 47.826 0.00 0.00 42.31 4.30
353 354 4.429108 GAAAAGAGAGAGATCTGTTCGGG 58.571 47.826 0.00 0.00 34.64 5.14
354 355 3.374042 AAGAGAGAGATCTGTTCGGGA 57.626 47.619 0.00 0.00 0.00 5.14
355 356 2.650322 AGAGAGAGATCTGTTCGGGAC 58.350 52.381 0.00 0.00 0.00 4.46
390 391 1.009335 TGTCTCGACAACGACACCG 60.009 57.895 1.40 0.00 43.81 4.94
391 392 1.280746 GTCTCGACAACGACACCGA 59.719 57.895 0.00 0.00 43.81 4.69
392 393 0.109873 GTCTCGACAACGACACCGAT 60.110 55.000 0.00 0.00 43.81 4.18
393 394 0.109919 TCTCGACAACGACACCGATG 60.110 55.000 0.00 0.00 43.81 3.84
394 395 1.071019 CTCGACAACGACACCGATGG 61.071 60.000 0.00 0.00 43.81 3.51
395 396 1.372499 CGACAACGACACCGATGGT 60.372 57.895 0.00 0.00 41.95 3.55
416 417 3.782443 GGATGGCGGACCGGAGTT 61.782 66.667 17.22 0.00 39.70 3.01
417 418 2.511600 GATGGCGGACCGGAGTTG 60.512 66.667 17.22 0.00 39.70 3.16
418 419 3.310860 GATGGCGGACCGGAGTTGT 62.311 63.158 17.22 0.00 39.70 3.32
419 420 3.605749 ATGGCGGACCGGAGTTGTG 62.606 63.158 17.22 0.00 39.70 3.33
420 421 3.998672 GGCGGACCGGAGTTGTGA 61.999 66.667 17.22 0.00 0.00 3.58
421 422 2.737376 GCGGACCGGAGTTGTGAC 60.737 66.667 17.22 0.00 0.00 3.67
422 423 2.430244 CGGACCGGAGTTGTGACG 60.430 66.667 9.46 0.00 0.00 4.35
423 424 2.911484 CGGACCGGAGTTGTGACGA 61.911 63.158 9.46 0.00 0.00 4.20
424 425 1.372623 GGACCGGAGTTGTGACGAC 60.373 63.158 9.46 0.00 0.00 4.34
425 426 1.728426 GACCGGAGTTGTGACGACG 60.728 63.158 9.46 0.00 0.00 5.12
426 427 3.103911 CCGGAGTTGTGACGACGC 61.104 66.667 0.00 0.00 0.00 5.19
427 428 3.103911 CGGAGTTGTGACGACGCC 61.104 66.667 14.91 14.91 34.14 5.68
428 429 3.103911 GGAGTTGTGACGACGCCG 61.104 66.667 10.02 0.00 42.50 6.46
429 430 3.103911 GAGTTGTGACGACGCCGG 61.104 66.667 0.00 0.00 40.78 6.13
430 431 3.836176 GAGTTGTGACGACGCCGGT 62.836 63.158 1.90 0.00 40.78 5.28
431 432 3.698463 GTTGTGACGACGCCGGTG 61.698 66.667 14.93 14.93 40.78 4.94
432 433 4.953868 TTGTGACGACGCCGGTGG 62.954 66.667 21.14 6.53 40.78 4.61
444 445 4.742201 CGGTGGTGCAGGACGGAG 62.742 72.222 0.00 0.00 0.00 4.63
445 446 4.394712 GGTGGTGCAGGACGGAGG 62.395 72.222 0.00 0.00 0.00 4.30
446 447 3.311110 GTGGTGCAGGACGGAGGA 61.311 66.667 0.00 0.00 0.00 3.71
447 448 2.997315 TGGTGCAGGACGGAGGAG 60.997 66.667 0.00 0.00 0.00 3.69
448 449 4.459089 GGTGCAGGACGGAGGAGC 62.459 72.222 0.00 0.00 0.00 4.70
449 450 3.386237 GTGCAGGACGGAGGAGCT 61.386 66.667 0.00 0.00 0.00 4.09
450 451 3.385384 TGCAGGACGGAGGAGCTG 61.385 66.667 0.00 0.00 0.00 4.24
451 452 4.828925 GCAGGACGGAGGAGCTGC 62.829 72.222 0.00 0.00 0.00 5.25
458 459 4.434685 GGAGGAGCTGCGATTCTG 57.565 61.111 0.00 0.00 0.00 3.02
459 460 1.819229 GGAGGAGCTGCGATTCTGA 59.181 57.895 0.00 0.00 0.00 3.27
460 461 0.249405 GGAGGAGCTGCGATTCTGAG 60.249 60.000 0.00 0.00 0.00 3.35
461 462 0.875474 GAGGAGCTGCGATTCTGAGC 60.875 60.000 0.00 0.00 0.00 4.26
462 463 1.143620 GGAGCTGCGATTCTGAGCT 59.856 57.895 0.00 6.11 45.82 4.09
463 464 1.152989 GGAGCTGCGATTCTGAGCTG 61.153 60.000 10.15 0.00 43.18 4.24
465 466 3.004283 CTGCGATTCTGAGCTGCG 58.996 61.111 0.00 0.00 0.00 5.18
467 468 2.889503 GCGATTCTGAGCTGCGCT 60.890 61.111 9.73 2.68 43.85 5.92
468 469 3.004283 CGATTCTGAGCTGCGCTG 58.996 61.111 9.73 10.04 39.88 5.18
469 470 2.708255 GATTCTGAGCTGCGCTGC 59.292 61.111 29.38 29.38 39.88 5.25
470 471 3.152937 GATTCTGAGCTGCGCTGCG 62.153 63.158 29.77 19.17 39.88 5.18
471 472 3.654173 ATTCTGAGCTGCGCTGCGA 62.654 57.895 29.77 19.88 39.88 5.10
472 473 4.790861 TCTGAGCTGCGCTGCGAG 62.791 66.667 29.77 27.20 39.88 5.03
478 479 2.433145 CTGCGCTGCGAGGAAGAA 60.433 61.111 28.07 0.29 0.00 2.52
479 480 2.029288 CTGCGCTGCGAGGAAGAAA 61.029 57.895 28.07 0.00 0.00 2.52
480 481 1.964290 CTGCGCTGCGAGGAAGAAAG 61.964 60.000 28.07 5.27 0.00 2.62
481 482 2.781300 CGCTGCGAGGAAGAAAGC 59.219 61.111 18.66 0.00 0.00 3.51
482 483 2.781300 GCTGCGAGGAAGAAAGCG 59.219 61.111 0.00 0.00 0.00 4.68
483 484 2.029844 GCTGCGAGGAAGAAAGCGT 61.030 57.895 0.00 0.00 0.00 5.07
484 485 1.569479 GCTGCGAGGAAGAAAGCGTT 61.569 55.000 0.00 0.00 0.00 4.84
485 486 0.440371 CTGCGAGGAAGAAAGCGTTC 59.560 55.000 3.99 3.99 0.00 3.95
486 487 1.282248 TGCGAGGAAGAAAGCGTTCG 61.282 55.000 6.74 0.00 38.90 3.95
487 488 1.007336 GCGAGGAAGAAAGCGTTCGA 61.007 55.000 6.74 0.00 38.90 3.71
488 489 1.630148 CGAGGAAGAAAGCGTTCGAT 58.370 50.000 6.74 0.22 38.90 3.59
489 490 1.321743 CGAGGAAGAAAGCGTTCGATG 59.678 52.381 6.74 0.00 38.90 3.84
490 491 2.338500 GAGGAAGAAAGCGTTCGATGT 58.662 47.619 6.74 0.00 38.90 3.06
491 492 2.069273 AGGAAGAAAGCGTTCGATGTG 58.931 47.619 6.74 0.00 38.90 3.21
492 493 1.128692 GGAAGAAAGCGTTCGATGTGG 59.871 52.381 6.74 0.00 38.90 4.17
493 494 2.066262 GAAGAAAGCGTTCGATGTGGA 58.934 47.619 6.74 0.00 38.90 4.02
494 495 2.386661 AGAAAGCGTTCGATGTGGAT 57.613 45.000 6.74 0.00 38.90 3.41
495 496 3.520290 AGAAAGCGTTCGATGTGGATA 57.480 42.857 6.74 0.00 38.90 2.59
496 497 3.857052 AGAAAGCGTTCGATGTGGATAA 58.143 40.909 6.74 0.00 38.90 1.75
497 498 3.865745 AGAAAGCGTTCGATGTGGATAAG 59.134 43.478 6.74 0.00 38.90 1.73
498 499 2.225068 AGCGTTCGATGTGGATAAGG 57.775 50.000 0.00 0.00 0.00 2.69
499 500 1.202533 AGCGTTCGATGTGGATAAGGG 60.203 52.381 0.00 0.00 0.00 3.95
500 501 1.202486 GCGTTCGATGTGGATAAGGGA 60.202 52.381 0.00 0.00 0.00 4.20
501 502 2.743938 CGTTCGATGTGGATAAGGGAG 58.256 52.381 0.00 0.00 0.00 4.30
502 503 2.545952 CGTTCGATGTGGATAAGGGAGG 60.546 54.545 0.00 0.00 0.00 4.30
503 504 1.717032 TCGATGTGGATAAGGGAGGG 58.283 55.000 0.00 0.00 0.00 4.30
504 505 0.687354 CGATGTGGATAAGGGAGGGG 59.313 60.000 0.00 0.00 0.00 4.79
505 506 0.402121 GATGTGGATAAGGGAGGGGC 59.598 60.000 0.00 0.00 0.00 5.80
506 507 1.418908 ATGTGGATAAGGGAGGGGCG 61.419 60.000 0.00 0.00 0.00 6.13
507 508 3.168528 TGGATAAGGGAGGGGCGC 61.169 66.667 0.00 0.00 0.00 6.53
508 509 3.955044 GGATAAGGGAGGGGCGCC 61.955 72.222 21.18 21.18 0.00 6.53
509 510 2.849646 GATAAGGGAGGGGCGCCT 60.850 66.667 28.56 24.42 0.00 5.52
510 511 3.171388 ATAAGGGAGGGGCGCCTG 61.171 66.667 29.42 0.00 0.00 4.85
515 516 3.878667 GGAGGGGCGCCTGCTATT 61.879 66.667 30.56 5.30 42.25 1.73
516 517 2.592861 GAGGGGCGCCTGCTATTG 60.593 66.667 29.42 0.00 42.25 1.90
517 518 4.883354 AGGGGCGCCTGCTATTGC 62.883 66.667 28.56 6.44 42.25 3.56
518 519 4.883354 GGGGCGCCTGCTATTGCT 62.883 66.667 28.56 0.00 42.25 3.91
519 520 3.589881 GGGCGCCTGCTATTGCTG 61.590 66.667 28.56 0.00 42.25 4.41
525 526 4.324471 CTGCTATTGCTGGCCACA 57.676 55.556 0.00 1.92 40.48 4.17
526 527 2.803203 CTGCTATTGCTGGCCACAT 58.197 52.632 0.00 0.00 40.48 3.21
527 528 0.384309 CTGCTATTGCTGGCCACATG 59.616 55.000 0.00 0.00 40.48 3.21
528 529 0.034283 TGCTATTGCTGGCCACATGA 60.034 50.000 0.00 0.00 40.48 3.07
529 530 1.325355 GCTATTGCTGGCCACATGAT 58.675 50.000 0.00 0.00 36.03 2.45
530 531 1.268899 GCTATTGCTGGCCACATGATC 59.731 52.381 0.00 0.00 36.03 2.92
531 532 1.534163 CTATTGCTGGCCACATGATCG 59.466 52.381 0.00 0.00 0.00 3.69
532 533 1.731433 ATTGCTGGCCACATGATCGC 61.731 55.000 0.00 1.74 0.00 4.58
533 534 3.945434 GCTGGCCACATGATCGCG 61.945 66.667 0.00 0.00 0.00 5.87
534 535 2.202919 CTGGCCACATGATCGCGA 60.203 61.111 13.09 13.09 0.00 5.87
535 536 1.596203 CTGGCCACATGATCGCGAT 60.596 57.895 23.97 23.97 0.00 4.58
536 537 1.563435 CTGGCCACATGATCGCGATC 61.563 60.000 36.16 36.16 38.29 3.69
549 550 4.131376 CGATCAATCGCCTGGCTT 57.869 55.556 17.92 1.72 43.84 4.35
550 551 1.645455 CGATCAATCGCCTGGCTTG 59.355 57.895 17.92 15.12 43.84 4.01
551 552 1.358046 GATCAATCGCCTGGCTTGC 59.642 57.895 17.92 0.24 0.00 4.01
552 553 1.378882 GATCAATCGCCTGGCTTGCA 61.379 55.000 17.92 6.25 0.00 4.08
553 554 0.754217 ATCAATCGCCTGGCTTGCAT 60.754 50.000 17.92 8.10 0.00 3.96
554 555 1.065273 CAATCGCCTGGCTTGCATC 59.935 57.895 17.92 0.00 0.00 3.91
555 556 1.378911 AATCGCCTGGCTTGCATCA 60.379 52.632 17.92 0.00 0.00 3.07
556 557 1.381928 AATCGCCTGGCTTGCATCAG 61.382 55.000 17.92 0.00 0.00 2.90
557 558 2.261430 ATCGCCTGGCTTGCATCAGA 62.261 55.000 17.92 4.03 33.11 3.27
558 559 2.470362 CGCCTGGCTTGCATCAGAG 61.470 63.158 17.92 0.00 33.11 3.35
559 560 2.772691 GCCTGGCTTGCATCAGAGC 61.773 63.158 12.43 6.67 38.17 4.09
560 561 2.470362 CCTGGCTTGCATCAGAGCG 61.470 63.158 12.08 0.00 39.78 5.03
561 562 2.437180 TGGCTTGCATCAGAGCGG 60.437 61.111 2.18 0.00 39.78 5.52
562 563 3.885521 GGCTTGCATCAGAGCGGC 61.886 66.667 2.18 0.00 39.78 6.53
563 564 4.233635 GCTTGCATCAGAGCGGCG 62.234 66.667 0.51 0.51 37.31 6.46
564 565 4.233635 CTTGCATCAGAGCGGCGC 62.234 66.667 26.86 26.86 37.31 6.53
567 568 4.527157 GCATCAGAGCGGCGCAAC 62.527 66.667 35.02 25.74 0.00 4.17
568 569 4.214383 CATCAGAGCGGCGCAACG 62.214 66.667 35.02 20.62 0.00 4.10
581 582 4.093952 CAACGCTTCGGCCAGCAG 62.094 66.667 14.88 9.83 40.09 4.24
582 583 4.626081 AACGCTTCGGCCAGCAGT 62.626 61.111 14.88 10.40 40.09 4.40
596 597 2.972505 CAGTCCGGCTGCAAACGT 60.973 61.111 12.01 0.00 38.52 3.99
597 598 2.203153 AGTCCGGCTGCAAACGTT 60.203 55.556 0.50 0.00 0.00 3.99
598 599 1.822186 AGTCCGGCTGCAAACGTTT 60.822 52.632 7.96 7.96 0.00 3.60
599 600 1.065109 GTCCGGCTGCAAACGTTTT 59.935 52.632 11.66 0.00 0.00 2.43
600 601 0.933047 GTCCGGCTGCAAACGTTTTC 60.933 55.000 11.66 7.34 0.00 2.29
601 602 1.660264 CCGGCTGCAAACGTTTTCC 60.660 57.895 11.66 9.23 0.00 3.13
602 603 1.358759 CGGCTGCAAACGTTTTCCT 59.641 52.632 11.66 0.00 0.00 3.36
603 604 0.248866 CGGCTGCAAACGTTTTCCTT 60.249 50.000 11.66 0.00 0.00 3.36
604 605 1.002251 CGGCTGCAAACGTTTTCCTTA 60.002 47.619 11.66 0.00 0.00 2.69
605 606 2.661594 GGCTGCAAACGTTTTCCTTAG 58.338 47.619 11.66 6.60 0.00 2.18
606 607 2.607038 GGCTGCAAACGTTTTCCTTAGG 60.607 50.000 11.66 0.00 0.00 2.69
607 608 2.292292 GCTGCAAACGTTTTCCTTAGGA 59.708 45.455 11.66 0.00 0.00 2.94
608 609 3.057526 GCTGCAAACGTTTTCCTTAGGAT 60.058 43.478 11.66 0.00 0.00 3.24
609 610 4.155280 GCTGCAAACGTTTTCCTTAGGATA 59.845 41.667 11.66 0.00 0.00 2.59
610 611 5.335348 GCTGCAAACGTTTTCCTTAGGATAA 60.335 40.000 11.66 0.04 0.00 1.75
611 612 6.636562 TGCAAACGTTTTCCTTAGGATAAA 57.363 33.333 11.66 3.35 0.00 1.40
612 613 6.440436 TGCAAACGTTTTCCTTAGGATAAAC 58.560 36.000 11.66 19.54 33.60 2.01
613 614 6.263617 TGCAAACGTTTTCCTTAGGATAAACT 59.736 34.615 23.23 14.53 34.15 2.66
614 615 6.800408 GCAAACGTTTTCCTTAGGATAAACTC 59.200 38.462 23.23 8.17 34.15 3.01
615 616 7.303261 CAAACGTTTTCCTTAGGATAAACTCC 58.697 38.462 23.23 7.92 45.33 3.85
623 624 3.478540 GGATAAACTCCTTGCGCCT 57.521 52.632 4.18 0.00 41.29 5.52
624 625 1.751437 GGATAAACTCCTTGCGCCTT 58.249 50.000 4.18 0.00 41.29 4.35
625 626 2.092323 GGATAAACTCCTTGCGCCTTT 58.908 47.619 4.18 0.00 41.29 3.11
626 627 3.275999 GGATAAACTCCTTGCGCCTTTA 58.724 45.455 4.18 0.00 41.29 1.85
627 628 3.064958 GGATAAACTCCTTGCGCCTTTAC 59.935 47.826 4.18 0.00 41.29 2.01
628 629 1.244816 AAACTCCTTGCGCCTTTACC 58.755 50.000 4.18 0.00 0.00 2.85
629 630 0.608308 AACTCCTTGCGCCTTTACCC 60.608 55.000 4.18 0.00 0.00 3.69
630 631 1.299976 CTCCTTGCGCCTTTACCCT 59.700 57.895 4.18 0.00 0.00 4.34
631 632 1.002624 TCCTTGCGCCTTTACCCTG 60.003 57.895 4.18 0.00 0.00 4.45
632 633 1.002624 CCTTGCGCCTTTACCCTGA 60.003 57.895 4.18 0.00 0.00 3.86
633 634 0.394352 CCTTGCGCCTTTACCCTGAT 60.394 55.000 4.18 0.00 0.00 2.90
634 635 0.734889 CTTGCGCCTTTACCCTGATG 59.265 55.000 4.18 0.00 0.00 3.07
635 636 0.326595 TTGCGCCTTTACCCTGATGA 59.673 50.000 4.18 0.00 0.00 2.92
636 637 0.546122 TGCGCCTTTACCCTGATGAT 59.454 50.000 4.18 0.00 0.00 2.45
637 638 1.064758 TGCGCCTTTACCCTGATGATT 60.065 47.619 4.18 0.00 0.00 2.57
638 639 1.334869 GCGCCTTTACCCTGATGATTG 59.665 52.381 0.00 0.00 0.00 2.67
639 640 1.334869 CGCCTTTACCCTGATGATTGC 59.665 52.381 0.00 0.00 0.00 3.56
640 641 2.378038 GCCTTTACCCTGATGATTGCA 58.622 47.619 0.00 0.00 0.00 4.08
641 642 2.099756 GCCTTTACCCTGATGATTGCAC 59.900 50.000 0.00 0.00 0.00 4.57
642 643 2.355756 CCTTTACCCTGATGATTGCACG 59.644 50.000 0.00 0.00 0.00 5.34
643 644 1.378531 TTACCCTGATGATTGCACGC 58.621 50.000 0.00 0.00 0.00 5.34
644 645 0.541392 TACCCTGATGATTGCACGCT 59.459 50.000 0.00 0.00 0.00 5.07
645 646 0.541392 ACCCTGATGATTGCACGCTA 59.459 50.000 0.00 0.00 0.00 4.26
646 647 0.940126 CCCTGATGATTGCACGCTAC 59.060 55.000 0.00 0.00 0.00 3.58
647 648 1.655484 CCTGATGATTGCACGCTACA 58.345 50.000 0.00 0.00 0.00 2.74
648 649 2.009051 CCTGATGATTGCACGCTACAA 58.991 47.619 0.00 0.00 0.00 2.41
649 650 2.419673 CCTGATGATTGCACGCTACAAA 59.580 45.455 0.00 0.00 0.00 2.83
650 651 3.065786 CCTGATGATTGCACGCTACAAAT 59.934 43.478 0.00 0.00 0.00 2.32
651 652 4.018649 TGATGATTGCACGCTACAAATG 57.981 40.909 0.00 0.00 0.00 2.32
652 653 3.439825 TGATGATTGCACGCTACAAATGT 59.560 39.130 0.00 0.00 0.00 2.71
653 654 3.469899 TGATTGCACGCTACAAATGTC 57.530 42.857 0.00 0.00 0.00 3.06
654 655 2.810852 TGATTGCACGCTACAAATGTCA 59.189 40.909 0.00 0.00 0.00 3.58
661 662 2.749076 ACGCTACAAATGTCATGTGCAT 59.251 40.909 2.65 0.00 32.27 3.96
666 667 6.527957 GCTACAAATGTCATGTGCATTTTTC 58.472 36.000 20.16 10.98 42.54 2.29
667 668 6.145858 GCTACAAATGTCATGTGCATTTTTCA 59.854 34.615 20.16 11.87 42.54 2.69
677 678 3.243805 TGTGCATTTTTCAGTGACCATGG 60.244 43.478 11.19 11.19 0.00 3.66
693 694 7.290948 AGTGACCATGGTATATCTGAATCTTGA 59.709 37.037 19.80 0.00 0.00 3.02
698 699 9.511272 CCATGGTATATCTGAATCTTGATTTCA 57.489 33.333 2.57 0.00 0.00 2.69
748 755 5.256474 AGCTAGCCATGTAGATTGTGTTTT 58.744 37.500 12.13 0.00 0.00 2.43
779 786 3.316071 AGAGCAGATGACACTTGACAG 57.684 47.619 0.00 0.00 0.00 3.51
808 815 4.193334 GCAAGCGCCCCGGAATTC 62.193 66.667 0.73 0.00 0.00 2.17
816 823 1.474330 GCCCCGGAATTCAATCAACT 58.526 50.000 0.73 0.00 0.00 3.16
819 826 2.825532 CCCCGGAATTCAATCAACTGTT 59.174 45.455 0.73 0.00 0.00 3.16
820 827 3.119495 CCCCGGAATTCAATCAACTGTTC 60.119 47.826 0.73 0.00 0.00 3.18
821 828 3.119495 CCCGGAATTCAATCAACTGTTCC 60.119 47.826 0.73 0.00 33.49 3.62
822 829 3.505680 CCGGAATTCAATCAACTGTTCCA 59.494 43.478 7.93 0.00 35.91 3.53
823 830 4.158394 CCGGAATTCAATCAACTGTTCCAT 59.842 41.667 7.93 0.00 35.91 3.41
824 831 5.335127 CGGAATTCAATCAACTGTTCCATC 58.665 41.667 7.93 0.00 35.91 3.51
825 832 5.106197 CGGAATTCAATCAACTGTTCCATCA 60.106 40.000 7.93 0.00 35.91 3.07
826 833 6.327934 GGAATTCAATCAACTGTTCCATCAG 58.672 40.000 7.93 0.00 40.80 2.90
827 834 4.771590 TTCAATCAACTGTTCCATCAGC 57.228 40.909 0.00 0.00 38.84 4.26
828 835 2.743664 TCAATCAACTGTTCCATCAGCG 59.256 45.455 0.00 0.00 38.84 5.18
829 836 1.742761 ATCAACTGTTCCATCAGCGG 58.257 50.000 0.00 0.00 38.84 5.52
830 837 0.955428 TCAACTGTTCCATCAGCGGC 60.955 55.000 0.00 0.00 38.84 6.53
831 838 2.034879 AACTGTTCCATCAGCGGCG 61.035 57.895 0.51 0.51 38.84 6.46
832 839 2.125552 CTGTTCCATCAGCGGCGA 60.126 61.111 12.98 0.00 0.00 5.54
874 881 2.191786 ATCGTTTCATGTGGCGGGGA 62.192 55.000 0.00 0.00 0.00 4.81
907 935 1.871080 CAGTTGACTTGCCGAGACTT 58.129 50.000 0.00 0.00 0.00 3.01
908 936 1.528586 CAGTTGACTTGCCGAGACTTG 59.471 52.381 0.00 0.00 0.00 3.16
909 937 1.412710 AGTTGACTTGCCGAGACTTGA 59.587 47.619 0.00 0.00 0.00 3.02
910 938 2.037772 AGTTGACTTGCCGAGACTTGAT 59.962 45.455 0.00 0.00 0.00 2.57
911 939 3.258372 AGTTGACTTGCCGAGACTTGATA 59.742 43.478 0.00 0.00 0.00 2.15
912 940 3.510388 TGACTTGCCGAGACTTGATAG 57.490 47.619 0.00 0.00 0.00 2.08
913 941 2.826128 TGACTTGCCGAGACTTGATAGT 59.174 45.455 0.00 0.00 37.31 2.12
914 942 3.258372 TGACTTGCCGAGACTTGATAGTT 59.742 43.478 0.00 0.00 33.84 2.24
915 943 3.589988 ACTTGCCGAGACTTGATAGTTG 58.410 45.455 0.00 0.00 33.84 3.16
916 944 2.672961 TGCCGAGACTTGATAGTTGG 57.327 50.000 0.00 0.00 33.84 3.77
922 950 4.245660 CGAGACTTGATAGTTGGAAAGCA 58.754 43.478 0.00 0.00 33.84 3.91
2258 2307 5.779922 TGCAAGAAGTGAAGTACGAGTATT 58.220 37.500 0.00 0.00 0.00 1.89
2363 2426 0.895100 AGCTCCGCATTTGCTTTCCA 60.895 50.000 0.51 0.00 39.32 3.53
2378 2441 4.527816 TGCTTTCCAAATAAATCACCTGCT 59.472 37.500 0.00 0.00 0.00 4.24
2486 2557 2.217038 GGATAGGATCGGCAGGGCA 61.217 63.158 0.00 0.00 0.00 5.36
2489 2560 0.837691 ATAGGATCGGCAGGGCATGA 60.838 55.000 1.99 0.00 0.00 3.07
2498 2569 0.250640 GCAGGGCATGATCCGAAGAT 60.251 55.000 1.99 0.00 34.57 2.40
2511 2582 6.624710 GATCCGAAGATCGAAGTTCATATG 57.375 41.667 3.32 0.00 43.74 1.78
2512 2583 4.299155 TCCGAAGATCGAAGTTCATATGC 58.701 43.478 3.32 0.00 43.74 3.14
2513 2584 4.051237 CCGAAGATCGAAGTTCATATGCA 58.949 43.478 3.32 0.00 43.74 3.96
2514 2585 4.687948 CCGAAGATCGAAGTTCATATGCAT 59.312 41.667 3.79 3.79 43.74 3.96
2515 2586 5.389202 CCGAAGATCGAAGTTCATATGCATG 60.389 44.000 10.16 0.00 43.74 4.06
2516 2587 5.176406 CGAAGATCGAAGTTCATATGCATGT 59.824 40.000 10.16 0.00 43.74 3.21
2517 2588 6.536731 AAGATCGAAGTTCATATGCATGTC 57.463 37.500 10.16 0.00 33.57 3.06
2518 2589 4.683320 AGATCGAAGTTCATATGCATGTCG 59.317 41.667 10.16 1.34 33.57 4.35
2519 2590 4.040445 TCGAAGTTCATATGCATGTCGA 57.960 40.909 10.16 13.73 35.08 4.20
2528 2599 2.583593 GCATGTCGAGTCGAGCCC 60.584 66.667 17.12 4.98 36.23 5.19
2534 2605 1.022735 GTCGAGTCGAGCCCATCTTA 58.977 55.000 17.12 0.00 36.23 2.10
2538 2609 0.749649 AGTCGAGCCCATCTTAGCTG 59.250 55.000 0.00 0.00 40.11 4.24
2545 2616 2.757314 AGCCCATCTTAGCTGCTTTTTC 59.243 45.455 7.79 0.00 38.11 2.29
2546 2617 2.159184 GCCCATCTTAGCTGCTTTTTCC 60.159 50.000 7.79 0.00 0.00 3.13
2547 2618 2.428530 CCCATCTTAGCTGCTTTTTCCC 59.571 50.000 7.79 0.00 0.00 3.97
2558 2629 4.026052 CTGCTTTTTCCCCCTCAATGTAT 58.974 43.478 0.00 0.00 0.00 2.29
2559 2630 4.424842 TGCTTTTTCCCCCTCAATGTATT 58.575 39.130 0.00 0.00 0.00 1.89
2710 2797 1.376683 TACCTGCCAATGTGTCGCC 60.377 57.895 0.00 0.00 0.00 5.54
2731 2818 1.407025 CCTTTTAGCTCGTCCCTTCCC 60.407 57.143 0.00 0.00 0.00 3.97
2857 2956 4.378978 GGCAGTGCAATATAAACAACGTCA 60.379 41.667 18.61 0.00 0.00 4.35
2877 2976 1.226802 CTCGCGGATGTCTCTGTGG 60.227 63.158 6.13 0.00 38.56 4.17
2885 2984 1.569030 ATGTCTCTGTGGGCTGCCAT 61.569 55.000 22.05 0.00 0.00 4.40
2886 2985 0.909133 TGTCTCTGTGGGCTGCCATA 60.909 55.000 22.05 5.83 0.00 2.74
2887 2986 0.471617 GTCTCTGTGGGCTGCCATAT 59.528 55.000 22.05 0.00 0.00 1.78
2951 3051 3.022287 CAACCGCAGCTTGTTCGT 58.978 55.556 0.00 0.00 0.00 3.85
2960 3060 2.549282 CTTGTTCGTGTTCGGCGG 59.451 61.111 7.21 0.00 37.69 6.13
2994 3094 2.742372 ATGAGCCACCGACGCAAC 60.742 61.111 0.00 0.00 0.00 4.17
3097 3197 3.905678 CCTCTACCTGCGGAGGCG 61.906 72.222 24.53 14.65 44.33 5.52
3203 3310 2.202878 GGACGATAAGCTGCCGCA 60.203 61.111 2.05 0.00 39.10 5.69
3204 3311 2.526120 GGACGATAAGCTGCCGCAC 61.526 63.158 2.05 0.00 39.10 5.34
3205 3312 1.809619 GACGATAAGCTGCCGCACA 60.810 57.895 2.05 0.00 39.10 4.57
3206 3313 1.358725 GACGATAAGCTGCCGCACAA 61.359 55.000 2.05 0.00 39.10 3.33
3207 3314 1.349627 CGATAAGCTGCCGCACAAG 59.650 57.895 2.05 0.00 39.10 3.16
3208 3315 1.083806 CGATAAGCTGCCGCACAAGA 61.084 55.000 2.05 0.00 39.10 3.02
3209 3316 1.303309 GATAAGCTGCCGCACAAGAT 58.697 50.000 2.05 0.00 39.10 2.40
3210 3317 1.672881 GATAAGCTGCCGCACAAGATT 59.327 47.619 2.05 0.00 39.10 2.40
3211 3318 1.533625 TAAGCTGCCGCACAAGATTT 58.466 45.000 2.05 0.00 39.10 2.17
3212 3319 0.675633 AAGCTGCCGCACAAGATTTT 59.324 45.000 2.05 0.00 39.10 1.82
3213 3320 0.242017 AGCTGCCGCACAAGATTTTC 59.758 50.000 2.05 0.00 39.10 2.29
3214 3321 1.067199 GCTGCCGCACAAGATTTTCG 61.067 55.000 0.00 0.00 35.78 3.46
3215 3322 0.238289 CTGCCGCACAAGATTTTCGT 59.762 50.000 0.00 0.00 0.00 3.85
3216 3323 0.040514 TGCCGCACAAGATTTTCGTG 60.041 50.000 0.00 0.00 32.10 4.35
3217 3324 0.237235 GCCGCACAAGATTTTCGTGA 59.763 50.000 0.00 0.00 32.23 4.35
3218 3325 1.725931 GCCGCACAAGATTTTCGTGAG 60.726 52.381 0.00 0.00 32.23 3.51
3219 3326 1.531149 CCGCACAAGATTTTCGTGAGT 59.469 47.619 0.00 0.00 32.23 3.41
3220 3327 2.411547 CCGCACAAGATTTTCGTGAGTC 60.412 50.000 0.00 0.00 32.23 3.36
3221 3328 2.220824 CGCACAAGATTTTCGTGAGTCA 59.779 45.455 0.00 0.00 32.23 3.41
3222 3329 3.120546 CGCACAAGATTTTCGTGAGTCAT 60.121 43.478 0.00 0.00 32.23 3.06
3223 3330 4.153986 GCACAAGATTTTCGTGAGTCATG 58.846 43.478 5.96 5.96 32.23 3.07
3224 3331 4.083855 GCACAAGATTTTCGTGAGTCATGA 60.084 41.667 11.11 11.11 32.23 3.07
3225 3332 5.377358 CACAAGATTTTCGTGAGTCATGAC 58.623 41.667 18.47 18.47 32.23 3.06
3226 3333 4.150627 ACAAGATTTTCGTGAGTCATGACG 59.849 41.667 19.85 9.20 36.91 4.35
3227 3334 3.914312 AGATTTTCGTGAGTCATGACGT 58.086 40.909 19.85 8.72 36.91 4.34
3228 3335 3.675225 AGATTTTCGTGAGTCATGACGTG 59.325 43.478 19.85 11.05 36.91 4.49
3229 3336 1.136690 TTTCGTGAGTCATGACGTGC 58.863 50.000 19.85 13.63 36.91 5.34
3230 3337 0.666274 TTCGTGAGTCATGACGTGCC 60.666 55.000 19.85 11.06 36.91 5.01
3231 3338 2.094659 CGTGAGTCATGACGTGCCC 61.095 63.158 19.85 8.80 36.20 5.36
3232 3339 2.094659 GTGAGTCATGACGTGCCCG 61.095 63.158 19.85 0.00 40.83 6.13
3233 3340 2.509336 GAGTCATGACGTGCCCGG 60.509 66.667 19.85 0.00 38.78 5.73
3234 3341 4.760047 AGTCATGACGTGCCCGGC 62.760 66.667 19.85 1.04 44.55 6.13
3249 3356 4.740822 GGCCCCGCACCTTGACAT 62.741 66.667 0.00 0.00 0.00 3.06
3250 3357 2.676471 GCCCCGCACCTTGACATT 60.676 61.111 0.00 0.00 0.00 2.71
3251 3358 2.700773 GCCCCGCACCTTGACATTC 61.701 63.158 0.00 0.00 0.00 2.67
3252 3359 2.398554 CCCCGCACCTTGACATTCG 61.399 63.158 0.00 0.00 0.00 3.34
3253 3360 1.375396 CCCGCACCTTGACATTCGA 60.375 57.895 0.00 0.00 0.00 3.71
3254 3361 0.744414 CCCGCACCTTGACATTCGAT 60.744 55.000 0.00 0.00 0.00 3.59
3255 3362 1.086696 CCGCACCTTGACATTCGATT 58.913 50.000 0.00 0.00 0.00 3.34
3256 3363 1.202065 CCGCACCTTGACATTCGATTG 60.202 52.381 5.78 5.78 0.00 2.67
3257 3364 1.791555 CGCACCTTGACATTCGATTGC 60.792 52.381 7.21 1.81 0.00 3.56
3258 3365 1.791555 GCACCTTGACATTCGATTGCG 60.792 52.381 7.21 0.00 39.35 4.85
3259 3366 1.464608 CACCTTGACATTCGATTGCGT 59.535 47.619 7.21 0.00 38.98 5.24
3260 3367 1.464608 ACCTTGACATTCGATTGCGTG 59.535 47.619 7.21 0.00 38.98 5.34
3261 3368 1.527696 CTTGACATTCGATTGCGTGC 58.472 50.000 7.21 0.00 38.98 5.34
3262 3369 0.179227 TTGACATTCGATTGCGTGCG 60.179 50.000 7.21 0.00 38.98 5.34
3263 3370 1.288419 TGACATTCGATTGCGTGCGT 61.288 50.000 7.21 0.00 38.98 5.24
3264 3371 0.179225 GACATTCGATTGCGTGCGTT 60.179 50.000 7.21 0.00 38.98 4.84
3265 3372 0.179225 ACATTCGATTGCGTGCGTTC 60.179 50.000 7.21 0.00 38.98 3.95
3266 3373 1.058748 ATTCGATTGCGTGCGTTCG 59.941 52.632 9.19 9.19 38.98 3.95
3267 3374 1.623081 ATTCGATTGCGTGCGTTCGT 61.623 50.000 13.48 0.00 38.98 3.85
3268 3375 2.205595 TTCGATTGCGTGCGTTCGTC 62.206 55.000 13.48 0.00 38.98 4.20
3269 3376 2.850404 GATTGCGTGCGTTCGTCA 59.150 55.556 3.76 0.61 0.00 4.35
3270 3377 1.203065 GATTGCGTGCGTTCGTCAA 59.797 52.632 10.85 10.85 34.01 3.18
3271 3378 0.179225 GATTGCGTGCGTTCGTCAAT 60.179 50.000 16.13 16.13 38.80 2.57
3272 3379 0.179225 ATTGCGTGCGTTCGTCAATC 60.179 50.000 13.11 0.00 34.95 2.67
3273 3380 1.218875 TTGCGTGCGTTCGTCAATCT 61.219 50.000 3.76 0.00 0.00 2.40
3274 3381 1.225475 GCGTGCGTTCGTCAATCTG 60.225 57.895 3.76 0.00 0.00 2.90
3275 3382 1.416049 CGTGCGTTCGTCAATCTGG 59.584 57.895 0.00 0.00 0.00 3.86
3276 3383 1.006825 CGTGCGTTCGTCAATCTGGA 61.007 55.000 0.00 0.00 0.00 3.86
3277 3384 0.716108 GTGCGTTCGTCAATCTGGAG 59.284 55.000 0.00 0.00 0.00 3.86
3278 3385 0.317160 TGCGTTCGTCAATCTGGAGT 59.683 50.000 0.00 0.00 0.00 3.85
3279 3386 1.270094 TGCGTTCGTCAATCTGGAGTT 60.270 47.619 0.00 0.00 0.00 3.01
3280 3387 1.390463 GCGTTCGTCAATCTGGAGTTC 59.610 52.381 0.00 0.00 0.00 3.01
3281 3388 1.649171 CGTTCGTCAATCTGGAGTTCG 59.351 52.381 0.00 0.00 0.00 3.95
3282 3389 2.673833 GTTCGTCAATCTGGAGTTCGT 58.326 47.619 0.00 0.00 0.00 3.85
3283 3390 2.347697 TCGTCAATCTGGAGTTCGTG 57.652 50.000 0.00 0.00 0.00 4.35
3284 3391 0.716108 CGTCAATCTGGAGTTCGTGC 59.284 55.000 0.00 0.00 0.00 5.34
3285 3392 0.716108 GTCAATCTGGAGTTCGTGCG 59.284 55.000 0.00 0.00 0.00 5.34
3286 3393 1.014044 TCAATCTGGAGTTCGTGCGC 61.014 55.000 0.00 0.00 0.00 6.09
3319 3620 0.106708 CGTCCGACATCCATGGGAAT 59.893 55.000 13.02 0.00 34.34 3.01
3340 3641 7.801783 GGGAATTGATCGGTTCGTATAAATTTC 59.198 37.037 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.036731 TTCGGGCCCTCTCGAAGA 59.963 61.111 22.43 4.41 39.94 2.87
11 12 2.184579 GTTCGGGCCCTCTCGAAG 59.815 66.667 22.43 1.43 44.43 3.79
12 13 3.387947 GGTTCGGGCCCTCTCGAA 61.388 66.667 22.43 15.45 42.12 3.71
13 14 4.377760 AGGTTCGGGCCCTCTCGA 62.378 66.667 22.43 9.26 0.00 4.04
14 15 4.148825 CAGGTTCGGGCCCTCTCG 62.149 72.222 22.43 6.49 0.00 4.04
15 16 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
16 17 2.758852 TAACCAGGTTCGGGCCCTCT 62.759 60.000 22.43 9.13 0.00 3.69
17 18 1.844544 TTAACCAGGTTCGGGCCCTC 61.845 60.000 22.43 10.12 0.00 4.30
18 19 1.428718 TTTAACCAGGTTCGGGCCCT 61.429 55.000 22.43 0.00 0.00 5.19
19 20 1.075305 TTTAACCAGGTTCGGGCCC 59.925 57.895 13.57 13.57 0.00 5.80
20 21 0.537828 TGTTTAACCAGGTTCGGGCC 60.538 55.000 8.57 0.00 0.00 5.80
21 22 1.541379 ATGTTTAACCAGGTTCGGGC 58.459 50.000 8.57 0.00 0.00 6.13
22 23 2.888414 ACAATGTTTAACCAGGTTCGGG 59.112 45.455 8.57 0.00 0.00 5.14
23 24 3.818773 AGACAATGTTTAACCAGGTTCGG 59.181 43.478 8.57 0.00 0.00 4.30
24 25 4.513692 TGAGACAATGTTTAACCAGGTTCG 59.486 41.667 8.57 0.00 0.00 3.95
25 26 6.575162 ATGAGACAATGTTTAACCAGGTTC 57.425 37.500 8.57 0.00 0.00 3.62
26 27 6.293955 CGAATGAGACAATGTTTAACCAGGTT 60.294 38.462 10.50 10.50 0.00 3.50
27 28 5.181245 CGAATGAGACAATGTTTAACCAGGT 59.819 40.000 0.00 0.00 0.00 4.00
28 29 5.181245 ACGAATGAGACAATGTTTAACCAGG 59.819 40.000 0.00 0.00 0.00 4.45
29 30 6.147821 AGACGAATGAGACAATGTTTAACCAG 59.852 38.462 0.00 0.00 0.00 4.00
30 31 5.995282 AGACGAATGAGACAATGTTTAACCA 59.005 36.000 0.00 0.00 0.00 3.67
31 32 6.369065 AGAGACGAATGAGACAATGTTTAACC 59.631 38.462 0.00 0.00 0.00 2.85
32 33 7.352719 AGAGACGAATGAGACAATGTTTAAC 57.647 36.000 0.00 0.00 0.00 2.01
33 34 7.441157 ACAAGAGACGAATGAGACAATGTTTAA 59.559 33.333 0.00 0.00 0.00 1.52
34 35 6.929049 ACAAGAGACGAATGAGACAATGTTTA 59.071 34.615 0.00 0.00 0.00 2.01
35 36 5.760253 ACAAGAGACGAATGAGACAATGTTT 59.240 36.000 0.00 0.00 0.00 2.83
36 37 5.300752 ACAAGAGACGAATGAGACAATGTT 58.699 37.500 0.00 0.00 0.00 2.71
37 38 4.887748 ACAAGAGACGAATGAGACAATGT 58.112 39.130 0.00 0.00 0.00 2.71
38 39 5.163913 GGAACAAGAGACGAATGAGACAATG 60.164 44.000 0.00 0.00 0.00 2.82
39 40 4.932200 GGAACAAGAGACGAATGAGACAAT 59.068 41.667 0.00 0.00 0.00 2.71
40 41 4.307432 GGAACAAGAGACGAATGAGACAA 58.693 43.478 0.00 0.00 0.00 3.18
41 42 3.306088 GGGAACAAGAGACGAATGAGACA 60.306 47.826 0.00 0.00 0.00 3.41
42 43 3.254892 GGGAACAAGAGACGAATGAGAC 58.745 50.000 0.00 0.00 0.00 3.36
43 44 2.233922 GGGGAACAAGAGACGAATGAGA 59.766 50.000 0.00 0.00 0.00 3.27
44 45 2.028112 TGGGGAACAAGAGACGAATGAG 60.028 50.000 0.00 0.00 0.00 2.90
45 46 1.974957 TGGGGAACAAGAGACGAATGA 59.025 47.619 0.00 0.00 0.00 2.57
46 47 2.472695 TGGGGAACAAGAGACGAATG 57.527 50.000 0.00 0.00 0.00 2.67
47 48 2.418746 CGATGGGGAACAAGAGACGAAT 60.419 50.000 0.00 0.00 0.00 3.34
48 49 1.067142 CGATGGGGAACAAGAGACGAA 60.067 52.381 0.00 0.00 0.00 3.85
49 50 0.530744 CGATGGGGAACAAGAGACGA 59.469 55.000 0.00 0.00 0.00 4.20
50 51 0.530744 TCGATGGGGAACAAGAGACG 59.469 55.000 0.00 0.00 0.00 4.18
51 52 2.483889 GGATCGATGGGGAACAAGAGAC 60.484 54.545 0.54 0.00 0.00 3.36
52 53 1.762957 GGATCGATGGGGAACAAGAGA 59.237 52.381 0.54 0.00 0.00 3.10
53 54 1.486310 TGGATCGATGGGGAACAAGAG 59.514 52.381 0.54 0.00 0.00 2.85
54 55 1.578897 TGGATCGATGGGGAACAAGA 58.421 50.000 0.54 0.00 0.00 3.02
55 56 2.418368 TTGGATCGATGGGGAACAAG 57.582 50.000 0.54 0.00 0.00 3.16
56 57 2.889170 TTTGGATCGATGGGGAACAA 57.111 45.000 0.54 0.00 0.00 2.83
57 58 2.889170 TTTTGGATCGATGGGGAACA 57.111 45.000 0.54 0.00 0.00 3.18
58 59 2.623416 GGATTTTGGATCGATGGGGAAC 59.377 50.000 0.54 0.00 0.00 3.62
59 60 2.243478 TGGATTTTGGATCGATGGGGAA 59.757 45.455 0.54 0.00 0.00 3.97
60 61 1.849692 TGGATTTTGGATCGATGGGGA 59.150 47.619 0.54 0.00 0.00 4.81
61 62 1.956477 GTGGATTTTGGATCGATGGGG 59.044 52.381 0.54 0.00 0.00 4.96
62 63 2.653726 TGTGGATTTTGGATCGATGGG 58.346 47.619 0.54 0.00 0.00 4.00
63 64 4.139786 AGATGTGGATTTTGGATCGATGG 58.860 43.478 0.54 0.00 0.00 3.51
64 65 4.084171 CGAGATGTGGATTTTGGATCGATG 60.084 45.833 0.54 0.00 0.00 3.84
65 66 4.060900 CGAGATGTGGATTTTGGATCGAT 58.939 43.478 0.00 0.00 0.00 3.59
66 67 3.457234 CGAGATGTGGATTTTGGATCGA 58.543 45.455 0.00 0.00 0.00 3.59
67 68 2.545526 CCGAGATGTGGATTTTGGATCG 59.454 50.000 0.00 0.00 0.00 3.69
68 69 2.880890 CCCGAGATGTGGATTTTGGATC 59.119 50.000 0.00 0.00 0.00 3.36
69 70 2.509548 TCCCGAGATGTGGATTTTGGAT 59.490 45.455 0.00 0.00 0.00 3.41
70 71 1.912731 TCCCGAGATGTGGATTTTGGA 59.087 47.619 0.00 0.00 0.00 3.53
71 72 2.017049 GTCCCGAGATGTGGATTTTGG 58.983 52.381 0.00 0.00 32.20 3.28
72 73 2.017049 GGTCCCGAGATGTGGATTTTG 58.983 52.381 0.00 0.00 32.20 2.44
73 74 1.064685 GGGTCCCGAGATGTGGATTTT 60.065 52.381 0.00 0.00 32.20 1.82
74 75 0.546598 GGGTCCCGAGATGTGGATTT 59.453 55.000 0.00 0.00 32.20 2.17
75 76 1.345715 GGGGTCCCGAGATGTGGATT 61.346 60.000 0.48 0.00 32.20 3.01
76 77 1.766461 GGGGTCCCGAGATGTGGAT 60.766 63.158 0.48 0.00 32.20 3.41
77 78 2.365105 GGGGTCCCGAGATGTGGA 60.365 66.667 0.48 0.00 0.00 4.02
78 79 3.480133 GGGGGTCCCGAGATGTGG 61.480 72.222 0.48 0.00 36.85 4.17
87 88 0.615261 GATCTCGGATAGGGGGTCCC 60.615 65.000 0.00 0.00 45.90 4.46
88 89 0.615261 GGATCTCGGATAGGGGGTCC 60.615 65.000 0.00 0.00 0.00 4.46
89 90 0.966370 CGGATCTCGGATAGGGGGTC 60.966 65.000 0.00 0.00 34.75 4.46
90 91 1.076906 CGGATCTCGGATAGGGGGT 59.923 63.158 0.00 0.00 34.75 4.95
91 92 2.352032 GCGGATCTCGGATAGGGGG 61.352 68.421 5.87 0.00 39.69 5.40
92 93 2.352032 GGCGGATCTCGGATAGGGG 61.352 68.421 5.87 0.00 39.69 4.79
93 94 2.701780 CGGCGGATCTCGGATAGGG 61.702 68.421 0.00 0.00 39.69 3.53
94 95 1.032657 ATCGGCGGATCTCGGATAGG 61.033 60.000 7.21 0.00 39.69 2.57
95 96 0.811915 AATCGGCGGATCTCGGATAG 59.188 55.000 7.21 0.00 39.69 2.08
96 97 1.254026 AAATCGGCGGATCTCGGATA 58.746 50.000 7.21 0.00 39.69 2.59
97 98 0.393077 AAAATCGGCGGATCTCGGAT 59.607 50.000 7.21 4.79 39.69 4.18
98 99 0.177141 AAAAATCGGCGGATCTCGGA 59.823 50.000 7.21 2.90 39.69 4.55
99 100 0.304705 CAAAAATCGGCGGATCTCGG 59.695 55.000 7.21 0.00 39.69 4.63
100 101 1.004927 GTCAAAAATCGGCGGATCTCG 60.005 52.381 7.21 0.00 42.76 4.04
101 102 2.006888 TGTCAAAAATCGGCGGATCTC 58.993 47.619 7.21 0.00 30.81 2.75
102 103 1.737793 GTGTCAAAAATCGGCGGATCT 59.262 47.619 7.21 0.00 30.81 2.75
103 104 1.737793 AGTGTCAAAAATCGGCGGATC 59.262 47.619 7.21 0.00 30.81 3.36
104 105 1.468520 CAGTGTCAAAAATCGGCGGAT 59.531 47.619 7.21 0.04 0.00 4.18
105 106 0.871722 CAGTGTCAAAAATCGGCGGA 59.128 50.000 7.21 0.00 0.00 5.54
106 107 0.871722 TCAGTGTCAAAAATCGGCGG 59.128 50.000 7.21 0.00 0.00 6.13
107 108 1.262950 TGTCAGTGTCAAAAATCGGCG 59.737 47.619 0.00 0.00 0.00 6.46
108 109 2.604614 GGTGTCAGTGTCAAAAATCGGC 60.605 50.000 0.00 0.00 0.00 5.54
109 110 2.349438 CGGTGTCAGTGTCAAAAATCGG 60.349 50.000 0.00 0.00 0.00 4.18
110 111 2.349438 CCGGTGTCAGTGTCAAAAATCG 60.349 50.000 0.00 0.00 0.00 3.34
111 112 2.604614 GCCGGTGTCAGTGTCAAAAATC 60.605 50.000 1.90 0.00 0.00 2.17
112 113 1.336755 GCCGGTGTCAGTGTCAAAAAT 59.663 47.619 1.90 0.00 0.00 1.82
113 114 0.736053 GCCGGTGTCAGTGTCAAAAA 59.264 50.000 1.90 0.00 0.00 1.94
114 115 1.098712 GGCCGGTGTCAGTGTCAAAA 61.099 55.000 1.90 0.00 0.00 2.44
115 116 1.525077 GGCCGGTGTCAGTGTCAAA 60.525 57.895 1.90 0.00 0.00 2.69
116 117 2.110213 GGCCGGTGTCAGTGTCAA 59.890 61.111 1.90 0.00 0.00 3.18
117 118 4.293648 CGGCCGGTGTCAGTGTCA 62.294 66.667 20.10 0.00 0.00 3.58
128 129 4.787286 TACAACCATGGCGGCCGG 62.787 66.667 29.38 12.50 39.03 6.13
129 130 3.202001 CTACAACCATGGCGGCCG 61.202 66.667 24.05 24.05 39.03 6.13
130 131 3.518068 GCTACAACCATGGCGGCC 61.518 66.667 13.04 13.32 39.03 6.13
131 132 2.749839 TGCTACAACCATGGCGGC 60.750 61.111 13.04 0.00 39.03 6.53
132 133 2.406616 GGTGCTACAACCATGGCGG 61.407 63.158 13.04 6.68 40.22 6.13
133 134 2.749865 CGGTGCTACAACCATGGCG 61.750 63.158 13.04 5.85 40.53 5.69
134 135 2.406616 CCGGTGCTACAACCATGGC 61.407 63.158 13.04 0.00 40.53 4.40
135 136 1.748879 CCCGGTGCTACAACCATGG 60.749 63.158 11.19 11.19 40.53 3.66
136 137 1.748879 CCCCGGTGCTACAACCATG 60.749 63.158 0.00 0.00 40.53 3.66
137 138 2.674754 CCCCGGTGCTACAACCAT 59.325 61.111 0.00 0.00 40.53 3.55
138 139 4.338710 GCCCCGGTGCTACAACCA 62.339 66.667 0.00 0.00 40.53 3.67
139 140 4.338710 TGCCCCGGTGCTACAACC 62.339 66.667 11.12 0.00 36.82 3.77
140 141 3.053896 GTGCCCCGGTGCTACAAC 61.054 66.667 11.12 0.00 0.00 3.32
141 142 4.338710 GGTGCCCCGGTGCTACAA 62.339 66.667 11.12 0.00 0.00 2.41
143 144 4.468689 GAGGTGCCCCGGTGCTAC 62.469 72.222 11.12 6.70 35.12 3.58
183 184 2.105930 TTGTTTGCTGCAACCGGC 59.894 55.556 15.72 6.53 43.83 6.13
184 185 0.179113 AAGTTGTTTGCTGCAACCGG 60.179 50.000 15.72 0.00 45.14 5.28
185 186 2.483583 TAAGTTGTTTGCTGCAACCG 57.516 45.000 15.72 0.00 45.14 4.44
186 187 3.059166 CCATAAGTTGTTTGCTGCAACC 58.941 45.455 15.72 9.01 45.14 3.77
187 188 3.716601 ACCATAAGTTGTTTGCTGCAAC 58.283 40.909 15.72 10.84 44.57 4.17
188 189 4.367450 GAACCATAAGTTGTTTGCTGCAA 58.633 39.130 11.69 11.69 39.40 4.08
189 190 3.243704 GGAACCATAAGTTGTTTGCTGCA 60.244 43.478 0.00 0.00 39.40 4.41
190 191 3.243704 TGGAACCATAAGTTGTTTGCTGC 60.244 43.478 0.00 0.00 39.40 5.25
191 192 4.549458 CTGGAACCATAAGTTGTTTGCTG 58.451 43.478 0.00 0.00 39.40 4.41
192 193 3.005791 GCTGGAACCATAAGTTGTTTGCT 59.994 43.478 0.00 0.00 39.40 3.91
193 194 3.243704 TGCTGGAACCATAAGTTGTTTGC 60.244 43.478 0.00 0.00 39.40 3.68
194 195 4.582701 TGCTGGAACCATAAGTTGTTTG 57.417 40.909 0.00 0.00 39.40 2.93
195 196 4.082787 CGATGCTGGAACCATAAGTTGTTT 60.083 41.667 0.00 0.00 39.40 2.83
196 197 3.440173 CGATGCTGGAACCATAAGTTGTT 59.560 43.478 0.00 0.00 39.40 2.83
197 198 3.009723 CGATGCTGGAACCATAAGTTGT 58.990 45.455 0.00 0.00 39.40 3.32
198 199 2.223340 GCGATGCTGGAACCATAAGTTG 60.223 50.000 0.00 0.00 39.40 3.16
199 200 2.017049 GCGATGCTGGAACCATAAGTT 58.983 47.619 0.00 0.00 43.07 2.66
200 201 1.668419 GCGATGCTGGAACCATAAGT 58.332 50.000 0.00 0.00 0.00 2.24
201 202 0.947244 GGCGATGCTGGAACCATAAG 59.053 55.000 0.00 0.00 0.00 1.73
202 203 0.813610 CGGCGATGCTGGAACCATAA 60.814 55.000 0.00 0.00 0.00 1.90
203 204 1.227527 CGGCGATGCTGGAACCATA 60.228 57.895 0.00 0.00 0.00 2.74
204 205 1.966901 TACGGCGATGCTGGAACCAT 61.967 55.000 16.62 0.00 39.57 3.55
205 206 2.651105 TACGGCGATGCTGGAACCA 61.651 57.895 16.62 0.00 39.57 3.67
206 207 2.171725 GTACGGCGATGCTGGAACC 61.172 63.158 16.62 0.00 39.57 3.62
207 208 2.514013 CGTACGGCGATGCTGGAAC 61.514 63.158 16.62 0.00 44.77 3.62
208 209 2.202690 CGTACGGCGATGCTGGAA 60.203 61.111 16.62 0.00 44.77 3.53
209 210 4.865761 GCGTACGGCGATGCTGGA 62.866 66.667 16.62 0.00 44.77 3.86
227 228 1.667724 ACACGATAGCAAGAGCATTGC 59.332 47.619 16.44 16.44 45.49 3.56
228 229 3.371898 TGAACACGATAGCAAGAGCATTG 59.628 43.478 0.00 0.00 45.49 2.82
229 230 3.599343 TGAACACGATAGCAAGAGCATT 58.401 40.909 0.00 0.00 45.49 3.56
230 231 3.251479 TGAACACGATAGCAAGAGCAT 57.749 42.857 0.00 0.00 45.49 3.79
231 232 2.741759 TGAACACGATAGCAAGAGCA 57.258 45.000 0.00 0.00 45.49 4.26
232 233 3.452474 AGATGAACACGATAGCAAGAGC 58.548 45.455 0.00 0.00 42.67 4.09
233 234 4.930963 AGAGATGAACACGATAGCAAGAG 58.069 43.478 0.00 0.00 42.67 2.85
234 235 4.991153 AGAGATGAACACGATAGCAAGA 57.009 40.909 0.00 0.00 42.67 3.02
235 236 5.685068 CACTAGAGATGAACACGATAGCAAG 59.315 44.000 0.00 0.00 42.67 4.01
236 237 5.357032 TCACTAGAGATGAACACGATAGCAA 59.643 40.000 0.00 0.00 42.67 3.91
237 238 4.881850 TCACTAGAGATGAACACGATAGCA 59.118 41.667 0.00 0.00 42.67 3.49
238 239 5.237561 TCTCACTAGAGATGAACACGATAGC 59.762 44.000 0.00 0.00 45.73 2.97
239 240 6.852858 TCTCACTAGAGATGAACACGATAG 57.147 41.667 0.00 0.00 45.73 2.08
253 254 2.937149 CCAACGATCGTCTCTCACTAGA 59.063 50.000 22.98 0.00 0.00 2.43
254 255 2.032302 CCCAACGATCGTCTCTCACTAG 59.968 54.545 22.98 0.00 0.00 2.57
255 256 2.014857 CCCAACGATCGTCTCTCACTA 58.985 52.381 22.98 0.00 0.00 2.74
256 257 0.811915 CCCAACGATCGTCTCTCACT 59.188 55.000 22.98 0.00 0.00 3.41
257 258 0.179134 CCCCAACGATCGTCTCTCAC 60.179 60.000 22.98 0.00 0.00 3.51
258 259 0.323087 TCCCCAACGATCGTCTCTCA 60.323 55.000 22.98 3.03 0.00 3.27
259 260 1.001158 GATCCCCAACGATCGTCTCTC 60.001 57.143 22.98 9.03 29.96 3.20
260 261 1.033574 GATCCCCAACGATCGTCTCT 58.966 55.000 22.98 2.55 29.96 3.10
261 262 0.744874 TGATCCCCAACGATCGTCTC 59.255 55.000 22.98 11.63 41.39 3.36
262 263 0.747255 CTGATCCCCAACGATCGTCT 59.253 55.000 22.98 9.13 41.39 4.18
263 264 0.249489 CCTGATCCCCAACGATCGTC 60.249 60.000 22.98 7.59 41.39 4.20
264 265 0.686441 TCCTGATCCCCAACGATCGT 60.686 55.000 16.60 16.60 41.39 3.73
265 266 0.032678 CTCCTGATCCCCAACGATCG 59.967 60.000 14.88 14.88 41.39 3.69
266 267 1.414158 TCTCCTGATCCCCAACGATC 58.586 55.000 0.00 0.00 39.35 3.69
267 268 1.974236 GATCTCCTGATCCCCAACGAT 59.026 52.381 0.00 0.00 42.35 3.73
268 269 1.342975 TGATCTCCTGATCCCCAACGA 60.343 52.381 0.00 0.00 46.34 3.85
269 270 1.069823 CTGATCTCCTGATCCCCAACG 59.930 57.143 0.00 0.00 46.34 4.10
270 271 1.419387 CCTGATCTCCTGATCCCCAAC 59.581 57.143 0.00 0.00 46.34 3.77
271 272 1.294986 TCCTGATCTCCTGATCCCCAA 59.705 52.381 0.00 0.00 46.34 4.12
272 273 0.944238 TCCTGATCTCCTGATCCCCA 59.056 55.000 0.00 0.00 46.34 4.96
273 274 1.347062 GTCCTGATCTCCTGATCCCC 58.653 60.000 0.00 0.00 46.34 4.81
274 275 1.347062 GGTCCTGATCTCCTGATCCC 58.653 60.000 0.00 0.00 46.34 3.85
275 276 1.347062 GGGTCCTGATCTCCTGATCC 58.653 60.000 0.00 0.00 46.34 3.36
276 277 0.965439 CGGGTCCTGATCTCCTGATC 59.035 60.000 0.00 0.00 46.89 2.92
277 278 0.263172 ACGGGTCCTGATCTCCTGAT 59.737 55.000 4.16 0.00 35.26 2.90
278 279 0.684479 CACGGGTCCTGATCTCCTGA 60.684 60.000 4.16 0.00 0.00 3.86
279 280 0.684479 TCACGGGTCCTGATCTCCTG 60.684 60.000 4.16 0.00 0.00 3.86
280 281 0.396417 CTCACGGGTCCTGATCTCCT 60.396 60.000 4.16 0.00 0.00 3.69
281 282 2.022240 GCTCACGGGTCCTGATCTCC 62.022 65.000 4.16 0.00 0.00 3.71
282 283 1.439644 GCTCACGGGTCCTGATCTC 59.560 63.158 4.16 0.00 0.00 2.75
283 284 2.418910 CGCTCACGGGTCCTGATCT 61.419 63.158 4.16 0.00 34.97 2.75
284 285 2.105128 CGCTCACGGGTCCTGATC 59.895 66.667 4.16 0.00 34.97 2.92
285 286 2.680352 ACGCTCACGGGTCCTGAT 60.680 61.111 4.16 0.00 46.04 2.90
286 287 3.371063 GACGCTCACGGGTCCTGA 61.371 66.667 4.16 0.00 44.68 3.86
287 288 4.778415 CGACGCTCACGGGTCCTG 62.778 72.222 0.00 0.00 46.88 3.86
295 296 1.078759 CTCCAATGACCGACGCTCAC 61.079 60.000 0.00 0.00 0.00 3.51
296 297 1.215382 CTCCAATGACCGACGCTCA 59.785 57.895 0.00 0.00 0.00 4.26
297 298 0.526524 CTCTCCAATGACCGACGCTC 60.527 60.000 0.00 0.00 0.00 5.03
298 299 0.965866 TCTCTCCAATGACCGACGCT 60.966 55.000 0.00 0.00 0.00 5.07
299 300 0.108804 TTCTCTCCAATGACCGACGC 60.109 55.000 0.00 0.00 0.00 5.19
300 301 2.363788 TTTCTCTCCAATGACCGACG 57.636 50.000 0.00 0.00 0.00 5.12
319 320 5.132816 TCTCTCTCTTTTCCCTGTCCTTTTT 59.867 40.000 0.00 0.00 0.00 1.94
320 321 4.660771 TCTCTCTCTTTTCCCTGTCCTTTT 59.339 41.667 0.00 0.00 0.00 2.27
321 322 4.235372 TCTCTCTCTTTTCCCTGTCCTTT 58.765 43.478 0.00 0.00 0.00 3.11
322 323 3.863086 TCTCTCTCTTTTCCCTGTCCTT 58.137 45.455 0.00 0.00 0.00 3.36
323 324 3.551635 TCTCTCTCTTTTCCCTGTCCT 57.448 47.619 0.00 0.00 0.00 3.85
324 325 4.030216 AGATCTCTCTCTTTTCCCTGTCC 58.970 47.826 0.00 0.00 0.00 4.02
325 326 4.466015 ACAGATCTCTCTCTTTTCCCTGTC 59.534 45.833 0.00 0.00 0.00 3.51
326 327 4.424842 ACAGATCTCTCTCTTTTCCCTGT 58.575 43.478 0.00 0.00 0.00 4.00
327 328 5.418676 GAACAGATCTCTCTCTTTTCCCTG 58.581 45.833 0.00 0.00 29.55 4.45
328 329 4.159506 CGAACAGATCTCTCTCTTTTCCCT 59.840 45.833 0.00 0.00 31.26 4.20
329 330 4.429108 CGAACAGATCTCTCTCTTTTCCC 58.571 47.826 0.00 0.00 31.26 3.97
330 331 4.429108 CCGAACAGATCTCTCTCTTTTCC 58.571 47.826 0.00 0.00 31.26 3.13
331 332 4.158764 TCCCGAACAGATCTCTCTCTTTTC 59.841 45.833 0.00 0.00 31.53 2.29
332 333 4.081917 GTCCCGAACAGATCTCTCTCTTTT 60.082 45.833 0.00 0.00 0.00 2.27
333 334 3.445805 GTCCCGAACAGATCTCTCTCTTT 59.554 47.826 0.00 0.00 0.00 2.52
334 335 3.020984 GTCCCGAACAGATCTCTCTCTT 58.979 50.000 0.00 0.00 0.00 2.85
335 336 2.650322 GTCCCGAACAGATCTCTCTCT 58.350 52.381 0.00 0.00 0.00 3.10
336 337 1.332375 CGTCCCGAACAGATCTCTCTC 59.668 57.143 0.00 0.00 0.00 3.20
337 338 1.384525 CGTCCCGAACAGATCTCTCT 58.615 55.000 0.00 0.00 0.00 3.10
338 339 0.382515 CCGTCCCGAACAGATCTCTC 59.617 60.000 0.00 0.00 0.00 3.20
339 340 0.323542 ACCGTCCCGAACAGATCTCT 60.324 55.000 0.00 0.00 0.00 3.10
340 341 0.179134 CACCGTCCCGAACAGATCTC 60.179 60.000 0.00 0.00 0.00 2.75
341 342 0.611062 TCACCGTCCCGAACAGATCT 60.611 55.000 0.00 0.00 0.00 2.75
342 343 0.245539 TTCACCGTCCCGAACAGATC 59.754 55.000 0.00 0.00 0.00 2.75
343 344 0.246635 CTTCACCGTCCCGAACAGAT 59.753 55.000 0.00 0.00 0.00 2.90
344 345 1.663739 CTTCACCGTCCCGAACAGA 59.336 57.895 0.00 0.00 0.00 3.41
345 346 1.374252 CCTTCACCGTCCCGAACAG 60.374 63.158 0.00 0.00 0.00 3.16
346 347 2.738480 CCTTCACCGTCCCGAACA 59.262 61.111 0.00 0.00 0.00 3.18
347 348 2.047560 CCCTTCACCGTCCCGAAC 60.048 66.667 0.00 0.00 0.00 3.95
348 349 3.315949 CCCCTTCACCGTCCCGAA 61.316 66.667 0.00 0.00 0.00 4.30
367 368 2.048503 CGTTGTCGAGACACCCCC 60.049 66.667 5.30 0.00 41.67 5.40
368 369 1.372623 GTCGTTGTCGAGACACCCC 60.373 63.158 5.30 0.00 46.96 4.95
369 370 1.361271 TGTCGTTGTCGAGACACCC 59.639 57.895 5.30 0.00 46.96 4.61
374 375 0.109919 CATCGGTGTCGTTGTCGAGA 60.110 55.000 0.00 0.00 46.96 4.04
375 376 1.071019 CCATCGGTGTCGTTGTCGAG 61.071 60.000 0.00 0.00 46.96 4.04
376 377 1.081041 CCATCGGTGTCGTTGTCGA 60.081 57.895 0.00 0.00 44.12 4.20
377 378 1.372499 ACCATCGGTGTCGTTGTCG 60.372 57.895 0.00 0.00 32.98 4.35
378 379 4.667420 ACCATCGGTGTCGTTGTC 57.333 55.556 0.00 0.00 32.98 3.18
399 400 3.782443 AACTCCGGTCCGCCATCC 61.782 66.667 5.50 0.00 34.09 3.51
400 401 2.511600 CAACTCCGGTCCGCCATC 60.512 66.667 5.50 0.00 34.09 3.51
401 402 3.319198 ACAACTCCGGTCCGCCAT 61.319 61.111 5.50 0.00 34.09 4.40
402 403 4.308458 CACAACTCCGGTCCGCCA 62.308 66.667 5.50 0.00 34.09 5.69
403 404 3.998672 TCACAACTCCGGTCCGCC 61.999 66.667 5.50 0.00 0.00 6.13
404 405 2.737376 GTCACAACTCCGGTCCGC 60.737 66.667 5.50 0.00 0.00 5.54
405 406 2.430244 CGTCACAACTCCGGTCCG 60.430 66.667 3.60 3.60 0.00 4.79
406 407 1.372623 GTCGTCACAACTCCGGTCC 60.373 63.158 0.00 0.00 0.00 4.46
407 408 1.728426 CGTCGTCACAACTCCGGTC 60.728 63.158 0.00 0.00 0.00 4.79
408 409 2.333938 CGTCGTCACAACTCCGGT 59.666 61.111 0.00 0.00 0.00 5.28
409 410 3.103911 GCGTCGTCACAACTCCGG 61.104 66.667 0.00 0.00 0.00 5.14
410 411 3.103911 GGCGTCGTCACAACTCCG 61.104 66.667 0.00 0.00 0.00 4.63
411 412 3.103911 CGGCGTCGTCACAACTCC 61.104 66.667 0.00 0.00 0.00 3.85
412 413 3.103911 CCGGCGTCGTCACAACTC 61.104 66.667 9.28 0.00 33.95 3.01
413 414 3.908081 ACCGGCGTCGTCACAACT 61.908 61.111 9.28 0.00 33.95 3.16
414 415 3.698463 CACCGGCGTCGTCACAAC 61.698 66.667 9.28 0.00 33.95 3.32
415 416 4.953868 CCACCGGCGTCGTCACAA 62.954 66.667 9.28 0.00 33.95 3.33
427 428 4.742201 CTCCGTCCTGCACCACCG 62.742 72.222 0.00 0.00 0.00 4.94
428 429 4.394712 CCTCCGTCCTGCACCACC 62.395 72.222 0.00 0.00 0.00 4.61
429 430 3.302347 CTCCTCCGTCCTGCACCAC 62.302 68.421 0.00 0.00 0.00 4.16
430 431 2.997315 CTCCTCCGTCCTGCACCA 60.997 66.667 0.00 0.00 0.00 4.17
431 432 4.459089 GCTCCTCCGTCCTGCACC 62.459 72.222 0.00 0.00 0.00 5.01
432 433 3.386237 AGCTCCTCCGTCCTGCAC 61.386 66.667 0.00 0.00 0.00 4.57
433 434 3.385384 CAGCTCCTCCGTCCTGCA 61.385 66.667 0.00 0.00 0.00 4.41
434 435 4.828925 GCAGCTCCTCCGTCCTGC 62.829 72.222 0.00 0.00 43.10 4.85
435 436 4.504916 CGCAGCTCCTCCGTCCTG 62.505 72.222 0.00 0.00 0.00 3.86
436 437 4.742649 TCGCAGCTCCTCCGTCCT 62.743 66.667 0.00 0.00 0.00 3.85
437 438 2.962697 GAATCGCAGCTCCTCCGTCC 62.963 65.000 0.00 0.00 0.00 4.79
438 439 1.590259 GAATCGCAGCTCCTCCGTC 60.590 63.158 0.00 0.00 0.00 4.79
439 440 2.055042 AGAATCGCAGCTCCTCCGT 61.055 57.895 0.00 0.00 0.00 4.69
440 441 1.591059 CAGAATCGCAGCTCCTCCG 60.591 63.158 0.00 0.00 0.00 4.63
441 442 0.249405 CTCAGAATCGCAGCTCCTCC 60.249 60.000 0.00 0.00 0.00 4.30
442 443 0.875474 GCTCAGAATCGCAGCTCCTC 60.875 60.000 0.00 0.00 0.00 3.71
443 444 1.143620 GCTCAGAATCGCAGCTCCT 59.856 57.895 0.00 0.00 0.00 3.69
444 445 1.143620 AGCTCAGAATCGCAGCTCC 59.856 57.895 3.56 0.00 39.37 4.70
445 446 1.764180 GCAGCTCAGAATCGCAGCTC 61.764 60.000 6.09 0.13 41.73 4.09
446 447 1.814586 GCAGCTCAGAATCGCAGCT 60.815 57.895 3.56 3.56 44.59 4.24
447 448 2.708255 GCAGCTCAGAATCGCAGC 59.292 61.111 0.00 0.00 0.00 5.25
448 449 3.004283 CGCAGCTCAGAATCGCAG 58.996 61.111 0.00 0.00 0.00 5.18
461 462 1.964290 CTTTCTTCCTCGCAGCGCAG 61.964 60.000 10.87 1.31 0.00 5.18
462 463 2.029288 CTTTCTTCCTCGCAGCGCA 61.029 57.895 10.87 0.00 0.00 6.09
463 464 2.781300 CTTTCTTCCTCGCAGCGC 59.219 61.111 10.87 0.00 0.00 5.92
464 465 2.781300 GCTTTCTTCCTCGCAGCG 59.219 61.111 9.06 9.06 0.00 5.18
465 466 1.569479 AACGCTTTCTTCCTCGCAGC 61.569 55.000 0.00 0.00 0.00 5.25
466 467 0.440371 GAACGCTTTCTTCCTCGCAG 59.560 55.000 0.00 0.00 0.00 5.18
467 468 1.282248 CGAACGCTTTCTTCCTCGCA 61.282 55.000 1.12 0.00 0.00 5.10
468 469 1.007336 TCGAACGCTTTCTTCCTCGC 61.007 55.000 1.12 0.00 0.00 5.03
469 470 1.321743 CATCGAACGCTTTCTTCCTCG 59.678 52.381 1.12 0.00 0.00 4.63
470 471 2.092838 CACATCGAACGCTTTCTTCCTC 59.907 50.000 1.12 0.00 0.00 3.71
471 472 2.069273 CACATCGAACGCTTTCTTCCT 58.931 47.619 1.12 0.00 0.00 3.36
472 473 1.128692 CCACATCGAACGCTTTCTTCC 59.871 52.381 1.12 0.00 0.00 3.46
473 474 2.066262 TCCACATCGAACGCTTTCTTC 58.934 47.619 1.12 0.00 0.00 2.87
474 475 2.163818 TCCACATCGAACGCTTTCTT 57.836 45.000 1.12 0.00 0.00 2.52
475 476 2.386661 ATCCACATCGAACGCTTTCT 57.613 45.000 1.12 0.00 0.00 2.52
476 477 3.001330 CCTTATCCACATCGAACGCTTTC 59.999 47.826 0.00 0.00 0.00 2.62
477 478 2.936498 CCTTATCCACATCGAACGCTTT 59.064 45.455 0.00 0.00 0.00 3.51
478 479 2.550978 CCTTATCCACATCGAACGCTT 58.449 47.619 0.00 0.00 0.00 4.68
479 480 1.202533 CCCTTATCCACATCGAACGCT 60.203 52.381 0.00 0.00 0.00 5.07
480 481 1.202486 TCCCTTATCCACATCGAACGC 60.202 52.381 0.00 0.00 0.00 4.84
481 482 2.545952 CCTCCCTTATCCACATCGAACG 60.546 54.545 0.00 0.00 0.00 3.95
482 483 2.224305 CCCTCCCTTATCCACATCGAAC 60.224 54.545 0.00 0.00 0.00 3.95
483 484 2.047061 CCCTCCCTTATCCACATCGAA 58.953 52.381 0.00 0.00 0.00 3.71
484 485 1.717032 CCCTCCCTTATCCACATCGA 58.283 55.000 0.00 0.00 0.00 3.59
485 486 0.687354 CCCCTCCCTTATCCACATCG 59.313 60.000 0.00 0.00 0.00 3.84
486 487 0.402121 GCCCCTCCCTTATCCACATC 59.598 60.000 0.00 0.00 0.00 3.06
487 488 1.418908 CGCCCCTCCCTTATCCACAT 61.419 60.000 0.00 0.00 0.00 3.21
488 489 2.070039 CGCCCCTCCCTTATCCACA 61.070 63.158 0.00 0.00 0.00 4.17
489 490 2.829592 CGCCCCTCCCTTATCCAC 59.170 66.667 0.00 0.00 0.00 4.02
490 491 3.168528 GCGCCCCTCCCTTATCCA 61.169 66.667 0.00 0.00 0.00 3.41
491 492 3.955044 GGCGCCCCTCCCTTATCC 61.955 72.222 18.11 0.00 0.00 2.59
492 493 2.849646 AGGCGCCCCTCCCTTATC 60.850 66.667 26.15 0.00 36.46 1.75
493 494 3.171388 CAGGCGCCCCTCCCTTAT 61.171 66.667 26.15 0.00 40.33 1.73
498 499 3.878667 AATAGCAGGCGCCCCTCC 61.879 66.667 26.15 9.12 40.33 4.30
499 500 2.592861 CAATAGCAGGCGCCCCTC 60.593 66.667 26.15 12.80 40.33 4.30
500 501 4.883354 GCAATAGCAGGCGCCCCT 62.883 66.667 26.15 22.26 44.25 4.79
501 502 4.883354 AGCAATAGCAGGCGCCCC 62.883 66.667 26.15 15.42 45.49 5.80
502 503 3.589881 CAGCAATAGCAGGCGCCC 61.590 66.667 26.15 9.10 45.49 6.13
503 504 3.589881 CCAGCAATAGCAGGCGCC 61.590 66.667 21.89 21.89 45.49 6.53
508 509 0.384309 CATGTGGCCAGCAATAGCAG 59.616 55.000 5.11 0.00 45.49 4.24
509 510 0.034283 TCATGTGGCCAGCAATAGCA 60.034 50.000 5.11 0.00 45.49 3.49
510 511 1.268899 GATCATGTGGCCAGCAATAGC 59.731 52.381 5.11 0.00 42.56 2.97
511 512 1.534163 CGATCATGTGGCCAGCAATAG 59.466 52.381 5.11 2.84 0.00 1.73
512 513 1.596603 CGATCATGTGGCCAGCAATA 58.403 50.000 5.11 0.56 0.00 1.90
513 514 1.731433 GCGATCATGTGGCCAGCAAT 61.731 55.000 5.11 0.00 0.00 3.56
514 515 2.409055 GCGATCATGTGGCCAGCAA 61.409 57.895 5.11 0.00 0.00 3.91
515 516 2.825387 GCGATCATGTGGCCAGCA 60.825 61.111 5.11 8.26 0.00 4.41
516 517 3.945434 CGCGATCATGTGGCCAGC 61.945 66.667 5.11 2.49 0.00 4.85
517 518 1.563435 GATCGCGATCATGTGGCCAG 61.563 60.000 37.30 0.00 37.74 4.85
518 519 1.595109 GATCGCGATCATGTGGCCA 60.595 57.895 37.30 0.00 37.74 5.36
519 520 1.159713 TTGATCGCGATCATGTGGCC 61.160 55.000 42.55 20.53 46.12 5.36
520 521 0.870393 ATTGATCGCGATCATGTGGC 59.130 50.000 42.55 21.22 46.12 5.01
521 522 1.125566 CGATTGATCGCGATCATGTGG 59.874 52.381 42.55 31.41 46.12 4.17
522 523 2.482485 CGATTGATCGCGATCATGTG 57.518 50.000 42.55 31.42 46.12 3.21
533 534 1.358046 GCAAGCCAGGCGATTGATC 59.642 57.895 15.99 0.00 0.00 2.92
534 535 0.754217 ATGCAAGCCAGGCGATTGAT 60.754 50.000 15.99 5.43 0.00 2.57
535 536 1.378882 GATGCAAGCCAGGCGATTGA 61.379 55.000 15.99 3.57 0.00 2.57
536 537 1.065273 GATGCAAGCCAGGCGATTG 59.935 57.895 5.55 7.46 0.00 2.67
537 538 1.378911 TGATGCAAGCCAGGCGATT 60.379 52.632 5.55 0.00 0.00 3.34
538 539 1.822613 CTGATGCAAGCCAGGCGAT 60.823 57.895 5.55 0.00 0.00 4.58
539 540 2.437180 CTGATGCAAGCCAGGCGA 60.437 61.111 5.55 0.00 0.00 5.54
540 541 2.437180 TCTGATGCAAGCCAGGCG 60.437 61.111 5.55 0.00 0.00 5.52
541 542 2.772691 GCTCTGATGCAAGCCAGGC 61.773 63.158 1.84 1.84 32.22 4.85
542 543 2.470362 CGCTCTGATGCAAGCCAGG 61.470 63.158 12.28 6.37 35.00 4.45
543 544 2.470362 CCGCTCTGATGCAAGCCAG 61.470 63.158 2.60 5.33 35.00 4.85
544 545 2.437180 CCGCTCTGATGCAAGCCA 60.437 61.111 2.60 0.00 35.00 4.75
545 546 3.885521 GCCGCTCTGATGCAAGCC 61.886 66.667 2.60 0.00 35.00 4.35
546 547 4.233635 CGCCGCTCTGATGCAAGC 62.234 66.667 0.00 0.00 35.13 4.01
547 548 4.233635 GCGCCGCTCTGATGCAAG 62.234 66.667 0.00 0.00 0.00 4.01
550 551 4.527157 GTTGCGCCGCTCTGATGC 62.527 66.667 11.67 0.00 0.00 3.91
551 552 4.214383 CGTTGCGCCGCTCTGATG 62.214 66.667 11.67 0.00 0.00 3.07
564 565 4.093952 CTGCTGGCCGAAGCGTTG 62.094 66.667 10.27 0.33 46.65 4.10
565 566 4.626081 ACTGCTGGCCGAAGCGTT 62.626 61.111 10.27 0.00 46.65 4.84
580 581 1.381165 AAAACGTTTGCAGCCGGACT 61.381 50.000 15.46 0.00 0.00 3.85
581 582 0.933047 GAAAACGTTTGCAGCCGGAC 60.933 55.000 15.46 0.00 0.00 4.79
582 583 1.357334 GAAAACGTTTGCAGCCGGA 59.643 52.632 15.46 0.00 0.00 5.14
583 584 1.660264 GGAAAACGTTTGCAGCCGG 60.660 57.895 20.48 0.00 0.00 6.13
584 585 0.248866 AAGGAAAACGTTTGCAGCCG 60.249 50.000 20.48 5.65 0.00 5.52
585 586 2.607038 CCTAAGGAAAACGTTTGCAGCC 60.607 50.000 20.48 15.68 0.00 4.85
586 587 2.292292 TCCTAAGGAAAACGTTTGCAGC 59.708 45.455 20.48 4.32 0.00 5.25
587 588 4.766404 ATCCTAAGGAAAACGTTTGCAG 57.234 40.909 20.48 9.31 34.34 4.41
588 589 6.263617 AGTTTATCCTAAGGAAAACGTTTGCA 59.736 34.615 20.48 0.00 37.55 4.08
589 590 6.675026 AGTTTATCCTAAGGAAAACGTTTGC 58.325 36.000 15.46 13.05 37.55 3.68
590 591 7.303261 GGAGTTTATCCTAAGGAAAACGTTTG 58.697 38.462 15.46 0.23 45.64 2.93
591 592 7.444629 GGAGTTTATCCTAAGGAAAACGTTT 57.555 36.000 7.96 7.96 45.64 3.60
606 607 3.064958 GGTAAAGGCGCAAGGAGTTTATC 59.935 47.826 10.83 0.00 38.28 1.75
607 608 3.014623 GGTAAAGGCGCAAGGAGTTTAT 58.985 45.455 10.83 0.00 38.28 1.40
608 609 2.429478 GGTAAAGGCGCAAGGAGTTTA 58.571 47.619 10.83 0.08 38.28 2.01
609 610 1.244816 GGTAAAGGCGCAAGGAGTTT 58.755 50.000 10.83 1.08 38.28 2.66
610 611 0.608308 GGGTAAAGGCGCAAGGAGTT 60.608 55.000 10.83 0.00 38.28 3.01
611 612 1.002502 GGGTAAAGGCGCAAGGAGT 60.003 57.895 10.83 0.00 38.28 3.85
612 613 1.026718 CAGGGTAAAGGCGCAAGGAG 61.027 60.000 10.83 0.00 38.28 3.69
613 614 1.002624 CAGGGTAAAGGCGCAAGGA 60.003 57.895 10.83 0.00 38.28 3.36
614 615 0.394352 ATCAGGGTAAAGGCGCAAGG 60.394 55.000 10.83 0.00 38.28 3.61
615 616 0.734889 CATCAGGGTAAAGGCGCAAG 59.265 55.000 10.83 0.00 43.44 4.01
616 617 0.326595 TCATCAGGGTAAAGGCGCAA 59.673 50.000 10.83 0.00 0.00 4.85
617 618 0.546122 ATCATCAGGGTAAAGGCGCA 59.454 50.000 10.83 0.00 0.00 6.09
618 619 1.334869 CAATCATCAGGGTAAAGGCGC 59.665 52.381 0.00 0.00 0.00 6.53
619 620 1.334869 GCAATCATCAGGGTAAAGGCG 59.665 52.381 0.00 0.00 0.00 5.52
620 621 2.099756 GTGCAATCATCAGGGTAAAGGC 59.900 50.000 0.00 0.00 0.00 4.35
621 622 2.355756 CGTGCAATCATCAGGGTAAAGG 59.644 50.000 0.00 0.00 0.00 3.11
622 623 2.223340 GCGTGCAATCATCAGGGTAAAG 60.223 50.000 0.00 0.00 0.00 1.85
623 624 1.742831 GCGTGCAATCATCAGGGTAAA 59.257 47.619 0.00 0.00 0.00 2.01
624 625 1.065491 AGCGTGCAATCATCAGGGTAA 60.065 47.619 0.00 0.00 0.00 2.85
625 626 0.541392 AGCGTGCAATCATCAGGGTA 59.459 50.000 0.00 0.00 0.00 3.69
626 627 0.541392 TAGCGTGCAATCATCAGGGT 59.459 50.000 0.00 0.00 34.89 4.34
627 628 0.940126 GTAGCGTGCAATCATCAGGG 59.060 55.000 0.00 0.00 0.00 4.45
628 629 1.655484 TGTAGCGTGCAATCATCAGG 58.345 50.000 0.00 0.00 0.00 3.86
629 630 3.745332 TTTGTAGCGTGCAATCATCAG 57.255 42.857 0.00 0.00 0.00 2.90
630 631 3.439825 ACATTTGTAGCGTGCAATCATCA 59.560 39.130 0.00 0.00 0.00 3.07
631 632 4.019919 ACATTTGTAGCGTGCAATCATC 57.980 40.909 0.00 0.00 0.00 2.92
632 633 3.439825 TGACATTTGTAGCGTGCAATCAT 59.560 39.130 0.00 0.00 0.00 2.45
633 634 2.810852 TGACATTTGTAGCGTGCAATCA 59.189 40.909 0.00 0.00 0.00 2.57
634 635 3.469899 TGACATTTGTAGCGTGCAATC 57.530 42.857 0.00 0.00 0.00 2.67
635 636 3.191162 ACATGACATTTGTAGCGTGCAAT 59.809 39.130 0.00 0.00 0.00 3.56
636 637 2.551887 ACATGACATTTGTAGCGTGCAA 59.448 40.909 0.00 0.00 0.00 4.08
637 638 2.095819 CACATGACATTTGTAGCGTGCA 60.096 45.455 0.00 0.00 0.00 4.57
638 639 2.508867 CACATGACATTTGTAGCGTGC 58.491 47.619 0.00 0.00 0.00 5.34
639 640 2.095819 TGCACATGACATTTGTAGCGTG 60.096 45.455 0.00 0.29 0.00 5.34
640 641 2.150390 TGCACATGACATTTGTAGCGT 58.850 42.857 0.00 0.00 0.00 5.07
641 642 2.898181 TGCACATGACATTTGTAGCG 57.102 45.000 0.00 0.00 0.00 4.26
642 643 6.145858 TGAAAAATGCACATGACATTTGTAGC 59.854 34.615 22.91 15.80 44.76 3.58
643 644 7.383029 ACTGAAAAATGCACATGACATTTGTAG 59.617 33.333 22.91 21.26 44.76 2.74
644 645 7.169476 CACTGAAAAATGCACATGACATTTGTA 59.831 33.333 22.91 14.94 44.76 2.41
645 646 6.018588 CACTGAAAAATGCACATGACATTTGT 60.019 34.615 22.91 19.75 44.76 2.83
646 647 6.201234 TCACTGAAAAATGCACATGACATTTG 59.799 34.615 22.91 16.06 44.76 2.32
647 648 6.201425 GTCACTGAAAAATGCACATGACATTT 59.799 34.615 19.11 19.11 46.85 2.32
648 649 5.693104 GTCACTGAAAAATGCACATGACATT 59.307 36.000 0.00 6.30 39.38 2.71
649 650 5.224888 GTCACTGAAAAATGCACATGACAT 58.775 37.500 0.00 0.00 36.18 3.06
650 651 4.499526 GGTCACTGAAAAATGCACATGACA 60.500 41.667 0.00 0.00 37.53 3.58
651 652 3.983344 GGTCACTGAAAAATGCACATGAC 59.017 43.478 0.00 0.00 35.56 3.06
652 653 3.635836 TGGTCACTGAAAAATGCACATGA 59.364 39.130 0.00 0.00 0.00 3.07
653 654 3.979948 TGGTCACTGAAAAATGCACATG 58.020 40.909 0.00 0.00 0.00 3.21
654 655 4.561938 CCATGGTCACTGAAAAATGCACAT 60.562 41.667 2.57 0.00 0.00 3.21
661 662 7.629157 TCAGATATACCATGGTCACTGAAAAA 58.371 34.615 23.76 0.00 31.69 1.94
666 667 7.002250 AGATTCAGATATACCATGGTCACTG 57.998 40.000 23.76 23.18 0.00 3.66
667 668 7.290948 TCAAGATTCAGATATACCATGGTCACT 59.709 37.037 23.76 13.38 0.00 3.41
729 736 3.056607 GGCAAAACACAATCTACATGGCT 60.057 43.478 0.00 0.00 0.00 4.75
731 738 4.517952 TGGCAAAACACAATCTACATGG 57.482 40.909 0.00 0.00 0.00 3.66
748 755 2.693074 TCATCTGCTCTACGTTATGGCA 59.307 45.455 0.00 0.00 0.00 4.92
779 786 1.635281 CGCTTGCTCTCGATCTTGC 59.365 57.895 0.00 0.00 0.00 4.01
791 798 4.193334 GAATTCCGGGGCGCTTGC 62.193 66.667 7.64 0.00 38.11 4.01
829 836 3.509137 TTACCATCCCGGCGATCGC 62.509 63.158 31.52 31.52 39.03 4.58
830 837 1.372997 CTTACCATCCCGGCGATCG 60.373 63.158 11.69 11.69 39.03 3.69
831 838 1.668151 GCTTACCATCCCGGCGATC 60.668 63.158 9.30 0.00 39.03 3.69
832 839 2.426023 GCTTACCATCCCGGCGAT 59.574 61.111 9.30 0.00 39.03 4.58
842 849 2.070783 GAAACGATTCCACGCTTACCA 58.929 47.619 0.00 0.00 36.70 3.25
880 887 2.357517 AAGTCAACTGCCGCTCGG 60.358 61.111 3.56 3.56 38.57 4.63
902 930 5.105997 GCATTGCTTTCCAACTATCAAGTCT 60.106 40.000 0.16 0.00 35.99 3.24
907 935 3.081061 ACGCATTGCTTTCCAACTATCA 58.919 40.909 7.12 0.00 35.99 2.15
908 936 3.429085 CACGCATTGCTTTCCAACTATC 58.571 45.455 7.12 0.00 35.99 2.08
909 937 2.164219 CCACGCATTGCTTTCCAACTAT 59.836 45.455 7.12 0.00 35.99 2.12
910 938 1.539388 CCACGCATTGCTTTCCAACTA 59.461 47.619 7.12 0.00 35.99 2.24
911 939 0.314935 CCACGCATTGCTTTCCAACT 59.685 50.000 7.12 0.00 35.99 3.16
912 940 0.031994 ACCACGCATTGCTTTCCAAC 59.968 50.000 7.12 0.00 35.99 3.77
913 941 0.749649 AACCACGCATTGCTTTCCAA 59.250 45.000 7.12 0.00 37.94 3.53
914 942 0.313672 GAACCACGCATTGCTTTCCA 59.686 50.000 7.12 0.00 0.00 3.53
915 943 0.388520 GGAACCACGCATTGCTTTCC 60.389 55.000 7.12 9.24 31.84 3.13
916 944 0.729140 CGGAACCACGCATTGCTTTC 60.729 55.000 7.12 4.22 0.00 2.62
922 950 2.025418 GTCGTCGGAACCACGCATT 61.025 57.895 9.61 0.00 37.18 3.56
2250 2299 2.586258 AATCAGCTCGCAATACTCGT 57.414 45.000 0.00 0.00 0.00 4.18
2251 2300 3.601356 CAAAATCAGCTCGCAATACTCG 58.399 45.455 0.00 0.00 0.00 4.18
2252 2301 3.064545 AGCAAAATCAGCTCGCAATACTC 59.935 43.478 0.00 0.00 38.01 2.59
2253 2302 3.012518 AGCAAAATCAGCTCGCAATACT 58.987 40.909 0.00 0.00 38.01 2.12
2258 2307 1.237533 TGAAGCAAAATCAGCTCGCA 58.762 45.000 0.00 0.00 42.53 5.10
2378 2441 2.037121 ACAAGACACGACATCATCACCA 59.963 45.455 0.00 0.00 0.00 4.17
2383 2446 3.111853 ACACACAAGACACGACATCAT 57.888 42.857 0.00 0.00 0.00 2.45
2456 2526 0.827925 TCCTATCCTAGCCTGGCACG 60.828 60.000 22.65 10.82 0.00 5.34
2489 2560 4.926238 GCATATGAACTTCGATCTTCGGAT 59.074 41.667 6.97 0.00 40.88 4.18
2498 2569 4.040445 TCGACATGCATATGAACTTCGA 57.960 40.909 12.52 12.52 36.42 3.71
2500 2571 4.085363 CGACTCGACATGCATATGAACTTC 60.085 45.833 6.97 0.00 37.73 3.01
2503 2574 3.372060 TCGACTCGACATGCATATGAAC 58.628 45.455 6.97 0.00 37.73 3.18
2504 2575 3.632189 CTCGACTCGACATGCATATGAA 58.368 45.455 6.97 0.00 37.73 2.57
2505 2576 2.605580 GCTCGACTCGACATGCATATGA 60.606 50.000 6.97 0.00 37.73 2.15
2506 2577 1.718178 GCTCGACTCGACATGCATATG 59.282 52.381 0.00 0.00 40.24 1.78
2509 2580 1.227089 GGCTCGACTCGACATGCAT 60.227 57.895 11.83 0.00 0.00 3.96
2510 2581 2.181777 GGCTCGACTCGACATGCA 59.818 61.111 11.83 0.00 0.00 3.96
2511 2582 2.583593 GGGCTCGACTCGACATGC 60.584 66.667 0.00 0.00 0.00 4.06
2512 2583 0.596083 GATGGGCTCGACTCGACATG 60.596 60.000 7.54 0.00 0.00 3.21
2513 2584 0.753479 AGATGGGCTCGACTCGACAT 60.753 55.000 0.00 0.00 0.00 3.06
2514 2585 0.965866 AAGATGGGCTCGACTCGACA 60.966 55.000 0.00 0.00 0.00 4.35
2515 2586 1.002251 CTAAGATGGGCTCGACTCGAC 60.002 57.143 0.00 0.00 0.00 4.20
2516 2587 1.309950 CTAAGATGGGCTCGACTCGA 58.690 55.000 0.29 0.29 0.00 4.04
2517 2588 0.318275 GCTAAGATGGGCTCGACTCG 60.318 60.000 0.00 0.00 0.00 4.18
2518 2589 1.036707 AGCTAAGATGGGCTCGACTC 58.963 55.000 0.00 0.00 32.98 3.36
2519 2590 0.749649 CAGCTAAGATGGGCTCGACT 59.250 55.000 0.00 0.00 36.59 4.18
2528 2599 2.428530 GGGGGAAAAAGCAGCTAAGATG 59.571 50.000 0.00 0.00 0.00 2.90
2534 2605 0.188342 TTGAGGGGGAAAAAGCAGCT 59.812 50.000 0.00 0.00 0.00 4.24
2538 2609 5.420725 AAATACATTGAGGGGGAAAAAGC 57.579 39.130 0.00 0.00 0.00 3.51
2606 2679 7.882791 TGGAAAACTGTATCTCACACATGTAAT 59.117 33.333 0.00 0.00 32.33 1.89
2627 2700 3.904800 TCCGATGTAGCTCAATGGAAA 57.095 42.857 0.00 0.00 32.83 3.13
2710 2797 1.407025 GGAAGGGACGAGCTAAAAGGG 60.407 57.143 0.00 0.00 0.00 3.95
2731 2818 4.748679 GCTGAGTGGCGCGCAAAG 62.749 66.667 34.42 17.72 0.00 2.77
2857 2956 0.383590 CACAGAGACATCCGCGAGAT 59.616 55.000 8.23 5.89 34.66 2.75
2877 2976 0.250640 CCTGTCCTGATATGGCAGCC 60.251 60.000 3.66 3.66 34.56 4.85
2885 2984 0.395724 TCGCTGCTCCTGTCCTGATA 60.396 55.000 0.00 0.00 0.00 2.15
2886 2985 1.047596 ATCGCTGCTCCTGTCCTGAT 61.048 55.000 0.00 0.00 0.00 2.90
2887 2986 1.683707 ATCGCTGCTCCTGTCCTGA 60.684 57.895 0.00 0.00 0.00 3.86
2920 3020 2.125350 GTTGCTGGCTCTCCTCCG 60.125 66.667 0.00 0.00 0.00 4.63
2928 3028 4.962836 AAGCTGCGGTTGCTGGCT 62.963 61.111 0.00 3.37 46.69 4.75
2975 3075 4.758251 TGCGTCGGTGGCTCATGG 62.758 66.667 0.00 0.00 0.00 3.66
2978 3078 4.980805 GGTTGCGTCGGTGGCTCA 62.981 66.667 0.00 0.00 0.00 4.26
3001 3101 2.584970 TCCTTATCTTGCGCGGCG 60.585 61.111 19.62 19.62 0.00 6.46
3002 3102 0.810031 TTCTCCTTATCTTGCGCGGC 60.810 55.000 8.83 0.00 0.00 6.53
3003 3103 1.594862 CTTTCTCCTTATCTTGCGCGG 59.405 52.381 8.83 0.00 0.00 6.46
3009 3109 1.207329 ACGCCGCTTTCTCCTTATCTT 59.793 47.619 0.00 0.00 0.00 2.40
3203 3310 4.150627 CGTCATGACTCACGAAAATCTTGT 59.849 41.667 22.95 0.00 38.32 3.16
3204 3311 4.150627 ACGTCATGACTCACGAAAATCTTG 59.849 41.667 22.95 5.31 39.38 3.02
3205 3312 4.150627 CACGTCATGACTCACGAAAATCTT 59.849 41.667 22.95 0.00 39.38 2.40
3206 3313 3.675225 CACGTCATGACTCACGAAAATCT 59.325 43.478 22.95 0.00 39.38 2.40
3207 3314 3.722082 GCACGTCATGACTCACGAAAATC 60.722 47.826 22.95 0.00 39.38 2.17
3208 3315 2.157668 GCACGTCATGACTCACGAAAAT 59.842 45.455 22.95 0.00 39.38 1.82
3209 3316 1.525197 GCACGTCATGACTCACGAAAA 59.475 47.619 22.95 0.00 39.38 2.29
3210 3317 1.136690 GCACGTCATGACTCACGAAA 58.863 50.000 22.95 0.00 39.38 3.46
3211 3318 0.666274 GGCACGTCATGACTCACGAA 60.666 55.000 22.95 0.00 39.38 3.85
3212 3319 1.080772 GGCACGTCATGACTCACGA 60.081 57.895 22.95 0.00 39.38 4.35
3213 3320 2.094659 GGGCACGTCATGACTCACG 61.095 63.158 22.95 13.18 41.90 4.35
3214 3321 2.094659 CGGGCACGTCATGACTCAC 61.095 63.158 22.95 12.06 36.10 3.51
3215 3322 2.261361 CGGGCACGTCATGACTCA 59.739 61.111 22.95 0.00 36.10 3.41
3216 3323 2.509336 CCGGGCACGTCATGACTC 60.509 66.667 22.95 11.77 36.10 3.36
3217 3324 4.760047 GCCGGGCACGTCATGACT 62.760 66.667 22.95 8.01 36.10 3.41
3232 3339 4.740822 ATGTCAAGGTGCGGGGCC 62.741 66.667 0.00 0.00 0.00 5.80
3233 3340 2.676471 AATGTCAAGGTGCGGGGC 60.676 61.111 0.00 0.00 0.00 5.80
3234 3341 2.398554 CGAATGTCAAGGTGCGGGG 61.399 63.158 0.00 0.00 0.00 5.73
3235 3342 0.744414 ATCGAATGTCAAGGTGCGGG 60.744 55.000 0.00 0.00 0.00 6.13
3236 3343 1.086696 AATCGAATGTCAAGGTGCGG 58.913 50.000 0.00 0.00 0.00 5.69
3237 3344 1.791555 GCAATCGAATGTCAAGGTGCG 60.792 52.381 1.83 0.00 0.00 5.34
3238 3345 1.791555 CGCAATCGAATGTCAAGGTGC 60.792 52.381 1.83 0.00 38.10 5.01
3239 3346 1.464608 ACGCAATCGAATGTCAAGGTG 59.535 47.619 1.83 0.00 39.41 4.00
3240 3347 1.464608 CACGCAATCGAATGTCAAGGT 59.535 47.619 1.83 0.00 39.41 3.50
3241 3348 1.791555 GCACGCAATCGAATGTCAAGG 60.792 52.381 1.83 0.00 39.41 3.61
3242 3349 1.527696 GCACGCAATCGAATGTCAAG 58.472 50.000 1.83 0.00 39.41 3.02
3243 3350 0.179227 CGCACGCAATCGAATGTCAA 60.179 50.000 1.83 0.00 39.41 3.18
3244 3351 1.288419 ACGCACGCAATCGAATGTCA 61.288 50.000 1.83 0.00 39.41 3.58
3245 3352 0.179225 AACGCACGCAATCGAATGTC 60.179 50.000 1.83 0.00 39.41 3.06
3246 3353 0.179225 GAACGCACGCAATCGAATGT 60.179 50.000 1.83 0.00 39.41 2.71
3247 3354 1.181514 CGAACGCACGCAATCGAATG 61.182 55.000 7.46 0.00 37.48 2.67
3248 3355 1.058748 CGAACGCACGCAATCGAAT 59.941 52.632 7.46 0.00 37.48 3.34
3249 3356 2.205595 GACGAACGCACGCAATCGAA 62.206 55.000 17.10 0.00 38.59 3.71
3250 3357 2.712918 GACGAACGCACGCAATCGA 61.713 57.895 17.10 0.00 38.59 3.59
3251 3358 2.275202 GACGAACGCACGCAATCG 60.275 61.111 10.73 10.73 40.90 3.34
3252 3359 0.179225 ATTGACGAACGCACGCAATC 60.179 50.000 13.62 3.03 36.31 2.67
3253 3360 0.179225 GATTGACGAACGCACGCAAT 60.179 50.000 16.76 16.76 40.00 3.56
3254 3361 1.203065 GATTGACGAACGCACGCAA 59.797 52.632 0.00 11.31 36.70 4.85
3255 3362 1.663388 AGATTGACGAACGCACGCA 60.663 52.632 0.00 0.00 36.70 5.24
3256 3363 1.225475 CAGATTGACGAACGCACGC 60.225 57.895 0.00 0.00 36.70 5.34
3257 3364 1.006825 TCCAGATTGACGAACGCACG 61.007 55.000 0.00 0.48 39.31 5.34
3258 3365 0.716108 CTCCAGATTGACGAACGCAC 59.284 55.000 0.00 0.00 0.00 5.34
3259 3366 0.317160 ACTCCAGATTGACGAACGCA 59.683 50.000 0.00 0.00 0.00 5.24
3260 3367 1.390463 GAACTCCAGATTGACGAACGC 59.610 52.381 0.00 0.00 0.00 4.84
3261 3368 1.649171 CGAACTCCAGATTGACGAACG 59.351 52.381 0.00 0.00 0.00 3.95
3262 3369 2.408704 CACGAACTCCAGATTGACGAAC 59.591 50.000 0.00 0.00 0.00 3.95
3263 3370 2.672714 CACGAACTCCAGATTGACGAA 58.327 47.619 0.00 0.00 0.00 3.85
3264 3371 1.668919 GCACGAACTCCAGATTGACGA 60.669 52.381 0.00 0.00 0.00 4.20
3265 3372 0.716108 GCACGAACTCCAGATTGACG 59.284 55.000 0.00 0.00 0.00 4.35
3266 3373 0.716108 CGCACGAACTCCAGATTGAC 59.284 55.000 0.00 0.00 0.00 3.18
3267 3374 1.014044 GCGCACGAACTCCAGATTGA 61.014 55.000 0.30 0.00 0.00 2.57
3268 3375 1.291184 TGCGCACGAACTCCAGATTG 61.291 55.000 5.66 0.00 0.00 2.67
3269 3376 1.005037 TGCGCACGAACTCCAGATT 60.005 52.632 5.66 0.00 0.00 2.40
3270 3377 1.738099 GTGCGCACGAACTCCAGAT 60.738 57.895 26.77 0.00 0.00 2.90
3271 3378 2.355837 GTGCGCACGAACTCCAGA 60.356 61.111 26.77 0.00 0.00 3.86
3272 3379 2.162921 CTTGTGCGCACGAACTCCAG 62.163 60.000 33.22 16.10 0.00 3.86
3273 3380 2.202946 TTGTGCGCACGAACTCCA 60.203 55.556 33.22 13.28 0.00 3.86
3274 3381 2.551270 CTTGTGCGCACGAACTCC 59.449 61.111 33.22 10.55 0.00 3.85
3275 3382 1.291877 ATCCTTGTGCGCACGAACTC 61.292 55.000 33.22 11.33 0.00 3.01
3276 3383 0.884704 AATCCTTGTGCGCACGAACT 60.885 50.000 33.22 16.75 0.00 3.01
3277 3384 0.725784 CAATCCTTGTGCGCACGAAC 60.726 55.000 33.22 12.53 0.00 3.95
3278 3385 1.573932 CAATCCTTGTGCGCACGAA 59.426 52.632 33.22 25.38 0.00 3.85
3279 3386 2.324330 CCAATCCTTGTGCGCACGA 61.324 57.895 33.22 30.66 0.00 4.35
3280 3387 1.647545 ATCCAATCCTTGTGCGCACG 61.648 55.000 33.22 20.83 0.00 5.34
3281 3388 0.099436 GATCCAATCCTTGTGCGCAC 59.901 55.000 33.11 33.11 0.00 5.34
3282 3389 1.368345 CGATCCAATCCTTGTGCGCA 61.368 55.000 5.66 5.66 0.00 6.09
3283 3390 1.353103 CGATCCAATCCTTGTGCGC 59.647 57.895 0.00 0.00 0.00 6.09
3284 3391 0.652592 GACGATCCAATCCTTGTGCG 59.347 55.000 0.00 0.00 0.00 5.34
3285 3392 1.017387 GGACGATCCAATCCTTGTGC 58.983 55.000 0.00 0.00 36.28 4.57
3286 3393 1.134818 TCGGACGATCCAATCCTTGTG 60.135 52.381 0.00 0.00 35.91 3.33
3306 3413 2.175499 ACCGATCAATTCCCATGGATGT 59.825 45.455 15.22 0.00 0.00 3.06
3319 3620 6.819649 ACTGGAAATTTATACGAACCGATCAA 59.180 34.615 0.00 0.00 0.00 2.57
3340 3641 2.609459 GGCACACGATGAGATAAACTGG 59.391 50.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.