Multiple sequence alignment - TraesCS2A01G269200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G269200 chr2A 100.000 2876 0 0 1 2876 434577917 434580792 0.000000e+00 5312.0
1 TraesCS2A01G269200 chr2A 97.049 305 5 3 2043 2346 378844114 378844415 7.110000e-141 510.0
2 TraesCS2A01G269200 chr2A 96.129 310 11 1 2041 2349 51641248 51641557 3.310000e-139 505.0
3 TraesCS2A01G269200 chr2A 88.922 334 28 4 2420 2745 731082281 731082613 1.240000e-108 403.0
4 TraesCS2A01G269200 chr2A 88.024 334 28 6 2421 2745 475536266 475536596 4.500000e-103 385.0
5 TraesCS2A01G269200 chr2A 87.688 333 31 4 2421 2745 636838574 636838904 2.090000e-101 379.0
6 TraesCS2A01G269200 chr2A 86.667 90 10 2 2775 2863 636838908 636838996 6.560000e-17 99.0
7 TraesCS2A01G269200 chr2A 86.667 90 10 2 2775 2863 731082617 731082705 6.560000e-17 99.0
8 TraesCS2A01G269200 chr2B 94.287 1768 60 10 1 1757 397452039 397453776 0.000000e+00 2667.0
9 TraesCS2A01G269200 chr2B 97.049 305 8 1 2044 2348 142654524 142654827 1.980000e-141 512.0
10 TraesCS2A01G269200 chr2B 90.663 332 16 10 1715 2043 397453705 397454024 7.360000e-116 427.0
11 TraesCS2A01G269200 chr2B 97.619 42 1 0 2348 2389 397454007 397454048 3.970000e-09 73.1
12 TraesCS2A01G269200 chr2D 94.211 1382 41 10 669 2043 328369195 328370544 0.000000e+00 2073.0
13 TraesCS2A01G269200 chr2D 93.634 644 26 4 1 635 328366834 328367471 0.000000e+00 948.0
14 TraesCS2A01G269200 chr2D 96.732 306 9 1 2043 2348 632796366 632796062 2.560000e-140 508.0
15 TraesCS2A01G269200 chr2D 97.297 74 2 0 2348 2421 328370527 328370600 3.010000e-25 126.0
16 TraesCS2A01G269200 chr7B 93.261 460 25 5 2421 2876 332164782 332165239 0.000000e+00 673.0
17 TraesCS2A01G269200 chr7B 97.068 307 9 0 2042 2348 731129222 731129528 4.250000e-143 518.0
18 TraesCS2A01G269200 chr7B 96.440 309 11 0 2040 2348 704665671 704665363 7.110000e-141 510.0
19 TraesCS2A01G269200 chr7B 96.732 306 10 0 2044 2349 728122712 728122407 7.110000e-141 510.0
20 TraesCS2A01G269200 chr7B 95.860 314 12 1 2044 2357 413595118 413594806 9.200000e-140 507.0
21 TraesCS2A01G269200 chr4A 90.393 458 21 6 2421 2876 654904822 654904386 5.340000e-162 580.0
22 TraesCS2A01G269200 chr7D 97.068 307 8 1 2042 2348 82851131 82851436 1.530000e-142 516.0
23 TraesCS2A01G269200 chr7D 88.253 332 32 2 2421 2745 53626917 53626586 9.660000e-105 390.0
24 TraesCS2A01G269200 chr7D 85.556 90 11 2 2775 2863 53626582 53626494 3.050000e-15 93.5
25 TraesCS2A01G269200 chr6D 89.458 332 27 3 2421 2745 17473513 17473183 2.060000e-111 412.0
26 TraesCS2A01G269200 chr6B 89.222 334 26 5 2421 2745 640572527 640572195 2.670000e-110 409.0
27 TraesCS2A01G269200 chr7A 83.628 452 41 13 2421 2863 496770658 496770231 7.470000e-106 394.0
28 TraesCS2A01G269200 chr1B 88.288 333 30 4 2421 2745 590257538 590257207 9.660000e-105 390.0
29 TraesCS2A01G269200 chr3A 87.988 333 31 4 2421 2745 651156337 651156006 4.500000e-103 385.0
30 TraesCS2A01G269200 chr5D 89.324 281 21 3 2473 2745 121364815 121365094 7.630000e-91 344.0
31 TraesCS2A01G269200 chr5A 85.460 337 19 11 2406 2739 166900872 166901181 9.940000e-85 324.0
32 TraesCS2A01G269200 chr5A 80.899 445 30 23 2421 2863 619214448 619214839 1.670000e-77 300.0
33 TraesCS2A01G269200 chr6A 85.489 317 18 7 2421 2735 586284987 586284697 3.600000e-79 305.0
34 TraesCS2A01G269200 chr6A 84.494 316 22 10 2420 2735 597702970 597702682 1.300000e-73 287.0
35 TraesCS2A01G269200 chr1A 85.489 317 18 14 2421 2735 467157147 467157437 3.600000e-79 305.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G269200 chr2A 434577917 434580792 2875 False 5312.0 5312 100.000000 1 2876 1 chr2A.!!$F3 2875
1 TraesCS2A01G269200 chr2B 397452039 397454048 2009 False 1055.7 2667 94.189667 1 2389 3 chr2B.!!$F2 2388
2 TraesCS2A01G269200 chr2D 328366834 328370600 3766 False 1049.0 2073 95.047333 1 2421 3 chr2D.!!$F1 2420

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
781 2492 0.249657 GTGATCGGATCTGAGCACCC 60.25 60.0 33.24 16.23 46.69 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2269 3988 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.0 0.0 0.0 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 182 4.931601 CAGTATGTAGTGCTGCTTTGAGAA 59.068 41.667 0.00 0.00 33.73 2.87
394 395 1.997669 ACTGTAGCTTAGTTGCGAGC 58.002 50.000 0.00 0.00 39.17 5.03
411 412 4.083749 TGCGAGCGCTAACTGAAAATAAAA 60.084 37.500 11.50 0.00 42.51 1.52
457 458 6.148315 TGCTGTCAGAGTTTATTCTTGACATG 59.852 38.462 3.32 0.00 36.07 3.21
503 504 6.506147 TGAACTGTGATTGTTTTCATGAAGG 58.494 36.000 8.41 0.00 0.00 3.46
552 563 7.308348 CGGAGCTCCATTTTTGAACTAGTAAAA 60.308 37.037 31.67 0.00 35.14 1.52
553 564 8.357402 GGAGCTCCATTTTTGAACTAGTAAAAA 58.643 33.333 28.43 15.29 39.30 1.94
628 639 8.964476 TTGGACTCCTGTAAATAAAGATGATC 57.036 34.615 0.00 0.00 0.00 2.92
641 652 8.929260 AATAAAGATGATCATAGATGTGGCAA 57.071 30.769 8.54 0.00 0.00 4.52
754 2455 7.819644 ACACATGAATTCTGAATCGAAAATCA 58.180 30.769 7.05 3.25 31.68 2.57
772 2473 2.959516 TCAACACACAGTGATCGGATC 58.040 47.619 7.81 11.07 36.96 3.36
778 2489 1.135721 CACAGTGATCGGATCTGAGCA 59.864 52.381 18.39 18.39 33.93 4.26
780 2491 3.280920 GTGATCGGATCTGAGCACC 57.719 57.895 33.24 19.70 46.69 5.01
781 2492 0.249657 GTGATCGGATCTGAGCACCC 60.250 60.000 33.24 16.23 46.69 4.61
782 2493 1.006805 GATCGGATCTGAGCACCCG 60.007 63.158 14.92 0.00 43.02 5.28
783 2494 1.739338 GATCGGATCTGAGCACCCGT 61.739 60.000 14.92 0.00 42.34 5.28
784 2495 1.330655 ATCGGATCTGAGCACCCGTT 61.331 55.000 10.61 0.00 42.34 4.44
785 2496 0.681887 TCGGATCTGAGCACCCGTTA 60.682 55.000 0.00 0.00 42.34 3.18
786 2497 0.527817 CGGATCTGAGCACCCGTTAC 60.528 60.000 0.00 0.00 37.40 2.50
787 2498 0.535335 GGATCTGAGCACCCGTTACA 59.465 55.000 0.00 0.00 0.00 2.41
788 2499 1.066430 GGATCTGAGCACCCGTTACAA 60.066 52.381 0.00 0.00 0.00 2.41
789 2500 2.420129 GGATCTGAGCACCCGTTACAAT 60.420 50.000 0.00 0.00 0.00 2.71
790 2501 2.093306 TCTGAGCACCCGTTACAATG 57.907 50.000 0.00 0.00 0.00 2.82
791 2502 1.086696 CTGAGCACCCGTTACAATGG 58.913 55.000 0.00 0.00 34.76 3.16
792 2503 0.398696 TGAGCACCCGTTACAATGGT 59.601 50.000 0.00 0.00 33.04 3.55
793 2504 1.202830 TGAGCACCCGTTACAATGGTT 60.203 47.619 0.00 0.00 33.04 3.67
794 2505 1.199097 GAGCACCCGTTACAATGGTTG 59.801 52.381 0.00 0.00 33.04 3.77
795 2506 1.202830 AGCACCCGTTACAATGGTTGA 60.203 47.619 2.21 0.00 29.68 3.18
796 2507 1.199097 GCACCCGTTACAATGGTTGAG 59.801 52.381 2.21 0.00 29.68 3.02
797 2508 1.199097 CACCCGTTACAATGGTTGAGC 59.801 52.381 0.00 0.00 29.68 4.26
1013 2728 2.969238 CACCATGGCTCCGATCGC 60.969 66.667 13.04 0.00 0.00 4.58
1146 2864 2.148982 CAGTCAGACGAAGCTCGCG 61.149 63.158 0.00 0.00 45.12 5.87
1227 2945 2.835431 ATCACCTCGCTCCCCTCG 60.835 66.667 0.00 0.00 0.00 4.63
1279 2997 1.012841 GGTCCTGGACTACTACGACG 58.987 60.000 25.01 0.00 32.47 5.12
1338 3056 0.889638 TCACGACGCTCTTCCAGTCT 60.890 55.000 0.00 0.00 33.10 3.24
1515 3233 3.397439 AGCTCTGCCATCGTGCCT 61.397 61.111 0.00 0.00 0.00 4.75
1577 3295 0.106894 GCGCCTGCCCTTACTAAGAT 59.893 55.000 0.00 0.00 33.98 2.40
1672 3390 0.376152 GTCCGACGACGATTCTAGCA 59.624 55.000 9.28 0.00 42.66 3.49
1675 3393 1.596260 CCGACGACGATTCTAGCACTA 59.404 52.381 9.28 0.00 42.66 2.74
1773 3491 2.667536 GCGCCGGCAGATGATGAT 60.668 61.111 28.98 0.00 39.62 2.45
1774 3492 2.962827 GCGCCGGCAGATGATGATG 61.963 63.158 28.98 6.77 39.62 3.07
1775 3493 1.301165 CGCCGGCAGATGATGATGA 60.301 57.895 28.98 0.00 0.00 2.92
1776 3494 0.672711 CGCCGGCAGATGATGATGAT 60.673 55.000 28.98 0.00 0.00 2.45
1885 3603 0.178068 TTCGCTCTGACTTATGCCCC 59.822 55.000 0.00 0.00 0.00 5.80
1908 3626 5.243283 CCCTGCGTACAAGTAGGTTAGATAT 59.757 44.000 4.64 0.00 41.61 1.63
1941 3660 1.203758 CACTACGATGGTGTGTAGGCA 59.796 52.381 0.00 0.00 41.84 4.75
1979 3698 5.957842 TTGGCTGTCAAATCGAAATTACT 57.042 34.783 0.00 0.00 31.46 2.24
1980 3699 5.295431 TGGCTGTCAAATCGAAATTACTG 57.705 39.130 0.00 0.00 0.00 2.74
1981 3700 4.759693 TGGCTGTCAAATCGAAATTACTGT 59.240 37.500 0.00 0.00 0.00 3.55
1982 3701 5.935206 TGGCTGTCAAATCGAAATTACTGTA 59.065 36.000 0.00 0.00 0.00 2.74
1983 3702 6.128391 TGGCTGTCAAATCGAAATTACTGTAC 60.128 38.462 0.00 0.00 0.00 2.90
2025 3744 1.271102 GATGTGCGAGATAGGAGGGAC 59.729 57.143 0.00 0.00 0.00 4.46
2026 3745 1.101635 TGTGCGAGATAGGAGGGACG 61.102 60.000 0.00 0.00 0.00 4.79
2027 3746 2.194212 TGCGAGATAGGAGGGACGC 61.194 63.158 0.00 0.00 44.95 5.19
2072 3791 6.480524 TTGAACATCAGTACATACACAAGC 57.519 37.500 0.00 0.00 0.00 4.01
2073 3792 4.625311 TGAACATCAGTACATACACAAGCG 59.375 41.667 0.00 0.00 0.00 4.68
2074 3793 2.930040 ACATCAGTACATACACAAGCGC 59.070 45.455 0.00 0.00 0.00 5.92
2075 3794 3.190079 CATCAGTACATACACAAGCGCT 58.810 45.455 2.64 2.64 0.00 5.92
2076 3795 2.876091 TCAGTACATACACAAGCGCTC 58.124 47.619 12.06 0.00 0.00 5.03
2077 3796 2.230266 TCAGTACATACACAAGCGCTCA 59.770 45.455 12.06 0.00 0.00 4.26
2078 3797 3.119137 TCAGTACATACACAAGCGCTCAT 60.119 43.478 12.06 0.00 0.00 2.90
2079 3798 4.097286 TCAGTACATACACAAGCGCTCATA 59.903 41.667 12.06 0.81 0.00 2.15
2080 3799 4.984785 CAGTACATACACAAGCGCTCATAT 59.015 41.667 12.06 3.50 0.00 1.78
2081 3800 6.016610 TCAGTACATACACAAGCGCTCATATA 60.017 38.462 12.06 1.64 0.00 0.86
2082 3801 6.088217 CAGTACATACACAAGCGCTCATATAC 59.912 42.308 12.06 5.98 0.00 1.47
2083 3802 4.944048 ACATACACAAGCGCTCATATACA 58.056 39.130 12.06 0.00 0.00 2.29
2084 3803 4.745125 ACATACACAAGCGCTCATATACAC 59.255 41.667 12.06 0.00 0.00 2.90
2085 3804 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
2089 3808 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
2090 3809 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
2091 3810 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
2092 3811 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
2093 3812 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
2094 3813 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
2095 3814 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
2096 3815 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
2097 3816 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
2098 3817 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
2099 3818 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
2100 3819 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
2101 3820 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
2102 3821 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
2103 3822 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
2104 3823 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
2105 3824 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
2106 3825 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
2107 3826 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
2108 3827 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
2109 3828 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
2110 3829 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
2111 3830 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
2112 3831 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
2113 3832 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
2114 3833 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
2115 3834 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
2116 3835 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
2117 3836 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
2118 3837 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
2119 3838 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
2120 3839 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
2121 3840 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
2122 3841 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
2123 3842 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
2126 3845 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
2127 3846 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
2128 3847 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
2129 3848 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
2130 3849 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
2131 3850 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
2132 3851 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
2133 3852 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
2134 3853 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
2135 3854 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
2136 3855 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
2137 3856 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
2138 3857 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
2139 3858 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
2140 3859 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
2141 3860 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
2142 3861 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
2143 3862 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
2144 3863 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
2145 3864 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
2146 3865 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
2147 3866 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
2148 3867 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
2149 3868 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
2150 3869 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
2151 3870 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
2152 3871 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
2153 3872 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
2154 3873 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
2155 3874 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
2156 3875 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
2157 3876 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
2158 3877 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
2159 3878 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
2160 3879 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
2161 3880 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
2162 3881 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
2163 3882 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
2164 3883 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
2165 3884 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
2166 3885 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
2167 3886 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2168 3887 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2169 3888 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2170 3889 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2171 3890 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2172 3891 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
2173 3892 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
2174 3893 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
2175 3894 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
2176 3895 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
2177 3896 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
2178 3897 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
2179 3898 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
2180 3899 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
2181 3900 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
2182 3901 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
2183 3902 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
2184 3903 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
2185 3904 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
2186 3905 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
2187 3906 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
2188 3907 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
2189 3908 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
2190 3909 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
2191 3910 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
2204 3923 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
2205 3924 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
2226 3945 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
2227 3946 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
2228 3947 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
2229 3948 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
2230 3949 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
2231 3950 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
2232 3951 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
2233 3952 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
2234 3953 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
2235 3954 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
2236 3955 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
2237 3956 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
2238 3957 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
2249 3968 3.409856 CGCATCGCCGAAAATCCT 58.590 55.556 0.00 0.00 0.00 3.24
2250 3969 1.010797 CGCATCGCCGAAAATCCTG 60.011 57.895 0.00 0.00 0.00 3.86
2251 3970 1.428370 CGCATCGCCGAAAATCCTGA 61.428 55.000 0.00 0.00 0.00 3.86
2252 3971 0.732571 GCATCGCCGAAAATCCTGAA 59.267 50.000 0.00 0.00 0.00 3.02
2253 3972 1.132262 GCATCGCCGAAAATCCTGAAA 59.868 47.619 0.00 0.00 0.00 2.69
2254 3973 2.223572 GCATCGCCGAAAATCCTGAAAT 60.224 45.455 0.00 0.00 0.00 2.17
2255 3974 3.003275 GCATCGCCGAAAATCCTGAAATA 59.997 43.478 0.00 0.00 0.00 1.40
2256 3975 4.497340 GCATCGCCGAAAATCCTGAAATAA 60.497 41.667 0.00 0.00 0.00 1.40
2257 3976 5.577835 CATCGCCGAAAATCCTGAAATAAA 58.422 37.500 0.00 0.00 0.00 1.40
2258 3977 5.828299 TCGCCGAAAATCCTGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
2259 3978 5.816919 TCGCCGAAAATCCTGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
2260 3979 4.976116 CGCCGAAAATCCTGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
2261 3980 5.449862 CGCCGAAAATCCTGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
2262 3981 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
2263 3982 6.405842 GCCGAAAATCCTGAAATAAATCCAGT 60.406 38.462 0.00 0.00 0.00 4.00
2264 3983 7.201785 GCCGAAAATCCTGAAATAAATCCAGTA 60.202 37.037 0.00 0.00 0.00 2.74
2265 3984 8.682710 CCGAAAATCCTGAAATAAATCCAGTAA 58.317 33.333 0.00 0.00 0.00 2.24
2273 3992 9.398170 CCTGAAATAAATCCAGTAATAAATGCG 57.602 33.333 0.00 0.00 0.00 4.73
2276 3995 9.118236 GAAATAAATCCAGTAATAAATGCGAGC 57.882 33.333 0.00 0.00 0.00 5.03
2277 3996 7.744087 ATAAATCCAGTAATAAATGCGAGCA 57.256 32.000 0.00 0.00 0.00 4.26
2278 3997 5.424121 AATCCAGTAATAAATGCGAGCAC 57.576 39.130 0.00 0.00 0.00 4.40
2279 3998 3.202906 TCCAGTAATAAATGCGAGCACC 58.797 45.455 0.00 0.00 0.00 5.01
2280 3999 2.942376 CCAGTAATAAATGCGAGCACCA 59.058 45.455 0.00 0.00 0.00 4.17
2281 4000 3.002656 CCAGTAATAAATGCGAGCACCAG 59.997 47.826 0.00 0.00 0.00 4.00
2282 4001 3.002656 CAGTAATAAATGCGAGCACCAGG 59.997 47.826 0.00 0.00 0.00 4.45
2283 4002 2.418368 AATAAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
2284 4003 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
2285 4004 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
2286 4005 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
2287 4006 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
2288 4007 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
2289 4008 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
2290 4009 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
2291 4010 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
2292 4011 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
2293 4012 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
2298 4017 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
2308 4027 2.368192 CCTGGTGGGCTGGGGATA 60.368 66.667 0.00 0.00 0.00 2.59
2309 4028 2.757124 CCTGGTGGGCTGGGGATAC 61.757 68.421 0.00 0.00 0.00 2.24
2325 4044 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
2326 4045 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
2327 4046 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
2328 4047 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
2329 4048 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
2330 4049 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
2331 4050 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
2332 4051 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
2333 4052 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
2334 4053 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
2335 4054 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
2336 4055 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
2337 4056 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
2338 4057 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
2339 4058 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
2421 4140 7.034397 GTGTCACCTATTTAGTTCTGTAGGAC 58.966 42.308 4.43 0.00 37.67 3.85
2422 4141 6.952358 TGTCACCTATTTAGTTCTGTAGGACT 59.048 38.462 4.43 0.00 37.67 3.85
2423 4142 8.111545 TGTCACCTATTTAGTTCTGTAGGACTA 58.888 37.037 4.43 0.00 37.67 2.59
2424 4143 8.623030 GTCACCTATTTAGTTCTGTAGGACTAG 58.377 40.741 4.43 0.00 37.67 2.57
2425 4144 7.284944 TCACCTATTTAGTTCTGTAGGACTAGC 59.715 40.741 4.43 0.00 37.67 3.42
2426 4145 7.068348 CACCTATTTAGTTCTGTAGGACTAGCA 59.932 40.741 4.43 0.00 37.67 3.49
2427 4146 7.068470 ACCTATTTAGTTCTGTAGGACTAGCAC 59.932 40.741 4.43 0.00 37.67 4.40
2428 4147 6.852420 ATTTAGTTCTGTAGGACTAGCACA 57.148 37.500 0.66 0.00 0.00 4.57
2429 4148 6.659745 TTTAGTTCTGTAGGACTAGCACAA 57.340 37.500 0.66 0.00 0.00 3.33
2430 4149 6.659745 TTAGTTCTGTAGGACTAGCACAAA 57.340 37.500 0.66 0.00 0.00 2.83
2431 4150 5.746990 AGTTCTGTAGGACTAGCACAAAT 57.253 39.130 0.00 0.00 0.00 2.32
2432 4151 5.482908 AGTTCTGTAGGACTAGCACAAATG 58.517 41.667 0.00 0.00 0.00 2.32
2443 4162 2.015627 CACAAATGCCCGTGCGTTG 61.016 57.895 0.00 1.29 45.88 4.10
2444 4163 3.105157 CAAATGCCCGTGCGTTGC 61.105 61.111 0.00 0.00 45.88 4.17
2445 4164 3.600694 AAATGCCCGTGCGTTGCA 61.601 55.556 0.00 8.11 45.88 4.08
2446 4165 3.144120 AAATGCCCGTGCGTTGCAA 62.144 52.632 0.00 0.00 45.88 4.08
2447 4166 2.433231 AAATGCCCGTGCGTTGCAAT 62.433 50.000 0.59 0.43 45.88 3.56
2448 4167 3.629883 ATGCCCGTGCGTTGCAATG 62.630 57.895 14.54 14.54 41.47 2.82
2450 4169 4.418401 CCCGTGCGTTGCAATGGG 62.418 66.667 19.93 9.83 45.52 4.00
2451 4170 4.418401 CCGTGCGTTGCAATGGGG 62.418 66.667 19.93 5.78 41.47 4.96
2452 4171 3.361158 CGTGCGTTGCAATGGGGA 61.361 61.111 19.93 3.12 41.47 4.81
2453 4172 2.913765 CGTGCGTTGCAATGGGGAA 61.914 57.895 19.93 0.00 41.47 3.97
2454 4173 1.365633 GTGCGTTGCAATGGGGAAA 59.634 52.632 19.93 0.00 41.47 3.13
2455 4174 0.249657 GTGCGTTGCAATGGGGAAAA 60.250 50.000 19.93 0.00 41.47 2.29
2456 4175 0.465705 TGCGTTGCAATGGGGAAAAA 59.534 45.000 19.93 0.00 34.76 1.94
2457 4176 1.071385 TGCGTTGCAATGGGGAAAAAT 59.929 42.857 19.93 0.00 34.76 1.82
2458 4177 2.300152 TGCGTTGCAATGGGGAAAAATA 59.700 40.909 19.93 0.00 34.76 1.40
2459 4178 2.929398 GCGTTGCAATGGGGAAAAATAG 59.071 45.455 19.93 0.00 0.00 1.73
2460 4179 3.616317 GCGTTGCAATGGGGAAAAATAGT 60.616 43.478 19.93 0.00 0.00 2.12
2461 4180 4.565022 CGTTGCAATGGGGAAAAATAGTT 58.435 39.130 11.00 0.00 0.00 2.24
2462 4181 4.994217 CGTTGCAATGGGGAAAAATAGTTT 59.006 37.500 11.00 0.00 0.00 2.66
2463 4182 6.159988 CGTTGCAATGGGGAAAAATAGTTTA 58.840 36.000 11.00 0.00 0.00 2.01
2464 4183 6.816140 CGTTGCAATGGGGAAAAATAGTTTAT 59.184 34.615 11.00 0.00 0.00 1.40
2465 4184 7.333174 CGTTGCAATGGGGAAAAATAGTTTATT 59.667 33.333 11.00 0.00 0.00 1.40
2466 4185 9.008965 GTTGCAATGGGGAAAAATAGTTTATTT 57.991 29.630 0.59 0.00 39.92 1.40
2468 4187 9.225436 TGCAATGGGGAAAAATAGTTTATTTTC 57.775 29.630 7.13 4.11 44.98 2.29
2469 4188 9.225436 GCAATGGGGAAAAATAGTTTATTTTCA 57.775 29.630 11.65 2.95 44.98 2.69
2509 4228 8.755696 AATATGTGCAAAAATACATTCGTTGT 57.244 26.923 0.00 0.00 42.62 3.32
2510 4229 8.755696 ATATGTGCAAAAATACATTCGTTGTT 57.244 26.923 0.00 0.00 39.87 2.83
2511 4230 6.503616 TGTGCAAAAATACATTCGTTGTTC 57.496 33.333 0.00 0.00 39.87 3.18
2512 4231 6.036470 TGTGCAAAAATACATTCGTTGTTCA 58.964 32.000 0.00 0.00 39.87 3.18
2513 4232 6.699204 TGTGCAAAAATACATTCGTTGTTCAT 59.301 30.769 0.00 0.00 39.87 2.57
2514 4233 7.003072 GTGCAAAAATACATTCGTTGTTCATG 58.997 34.615 0.00 0.00 39.87 3.07
2515 4234 6.008875 GCAAAAATACATTCGTTGTTCATGC 58.991 36.000 0.00 0.00 39.87 4.06
2516 4235 6.346439 GCAAAAATACATTCGTTGTTCATGCA 60.346 34.615 0.00 0.00 39.87 3.96
2517 4236 7.562412 CAAAAATACATTCGTTGTTCATGCAA 58.438 30.769 0.00 0.00 39.87 4.08
2518 4237 7.706281 AAAATACATTCGTTGTTCATGCAAA 57.294 28.000 0.00 0.00 39.87 3.68
2519 4238 7.887996 AAATACATTCGTTGTTCATGCAAAT 57.112 28.000 0.00 0.00 39.87 2.32
2520 4239 7.887996 AATACATTCGTTGTTCATGCAAATT 57.112 28.000 0.00 0.00 39.87 1.82
2521 4240 7.887996 ATACATTCGTTGTTCATGCAAATTT 57.112 28.000 0.00 0.00 39.87 1.82
2522 4241 6.601741 ACATTCGTTGTTCATGCAAATTTT 57.398 29.167 0.00 0.00 33.74 1.82
2523 4242 7.706281 ACATTCGTTGTTCATGCAAATTTTA 57.294 28.000 0.00 0.00 33.74 1.52
2524 4243 7.786114 ACATTCGTTGTTCATGCAAATTTTAG 58.214 30.769 0.00 0.00 33.74 1.85
2525 4244 7.437862 ACATTCGTTGTTCATGCAAATTTTAGT 59.562 29.630 0.00 0.00 33.74 2.24
2526 4245 6.984740 TCGTTGTTCATGCAAATTTTAGTC 57.015 33.333 0.00 0.00 0.00 2.59
2527 4246 6.499172 TCGTTGTTCATGCAAATTTTAGTCA 58.501 32.000 0.00 0.00 0.00 3.41
2528 4247 6.975197 TCGTTGTTCATGCAAATTTTAGTCAA 59.025 30.769 0.00 0.00 0.00 3.18
2529 4248 7.651304 TCGTTGTTCATGCAAATTTTAGTCAAT 59.349 29.630 0.00 0.00 0.00 2.57
2530 4249 8.274939 CGTTGTTCATGCAAATTTTAGTCAATT 58.725 29.630 0.00 0.00 0.00 2.32
2531 4250 9.934190 GTTGTTCATGCAAATTTTAGTCAATTT 57.066 25.926 0.00 0.00 36.90 1.82
2565 4284 9.768662 ATCCAAAATTATTGAAATAGGACATGC 57.231 29.630 0.00 0.00 0.00 4.06
2566 4285 8.980596 TCCAAAATTATTGAAATAGGACATGCT 58.019 29.630 0.00 0.00 0.00 3.79
2675 4394 8.644374 AACTTGATAAAGTTTAGCCAATACCA 57.356 30.769 8.34 0.00 39.81 3.25
2676 4395 8.051901 ACTTGATAAAGTTTAGCCAATACCAC 57.948 34.615 8.34 0.00 0.00 4.16
2677 4396 7.888546 ACTTGATAAAGTTTAGCCAATACCACT 59.111 33.333 8.34 0.00 0.00 4.00
2678 4397 9.391006 CTTGATAAAGTTTAGCCAATACCACTA 57.609 33.333 8.34 0.00 0.00 2.74
2679 4398 9.742144 TTGATAAAGTTTAGCCAATACCACTAA 57.258 29.630 8.34 0.00 0.00 2.24
2680 4399 9.169592 TGATAAAGTTTAGCCAATACCACTAAC 57.830 33.333 8.34 0.00 0.00 2.34
2681 4400 9.169592 GATAAAGTTTAGCCAATACCACTAACA 57.830 33.333 0.00 0.00 0.00 2.41
2682 4401 7.826918 AAAGTTTAGCCAATACCACTAACAA 57.173 32.000 0.00 0.00 0.00 2.83
2683 4402 7.826918 AAGTTTAGCCAATACCACTAACAAA 57.173 32.000 0.00 0.00 0.00 2.83
2684 4403 7.826918 AGTTTAGCCAATACCACTAACAAAA 57.173 32.000 0.00 0.00 0.00 2.44
2685 4404 8.417273 AGTTTAGCCAATACCACTAACAAAAT 57.583 30.769 0.00 0.00 0.00 1.82
2686 4405 8.866093 AGTTTAGCCAATACCACTAACAAAATT 58.134 29.630 0.00 0.00 0.00 1.82
2687 4406 9.135843 GTTTAGCCAATACCACTAACAAAATTC 57.864 33.333 0.00 0.00 0.00 2.17
2688 4407 5.949735 AGCCAATACCACTAACAAAATTCG 58.050 37.500 0.00 0.00 0.00 3.34
2689 4408 5.099575 GCCAATACCACTAACAAAATTCGG 58.900 41.667 0.00 0.00 0.00 4.30
2690 4409 5.106078 GCCAATACCACTAACAAAATTCGGA 60.106 40.000 0.00 0.00 0.00 4.55
2691 4410 6.551736 CCAATACCACTAACAAAATTCGGAG 58.448 40.000 0.00 0.00 0.00 4.63
2692 4411 6.373216 CCAATACCACTAACAAAATTCGGAGA 59.627 38.462 0.00 0.00 0.00 3.71
2693 4412 7.414098 CCAATACCACTAACAAAATTCGGAGAG 60.414 40.741 0.00 0.00 38.43 3.20
2694 4413 5.223449 ACCACTAACAAAATTCGGAGAGA 57.777 39.130 0.00 0.00 38.43 3.10
2695 4414 5.238583 ACCACTAACAAAATTCGGAGAGAG 58.761 41.667 0.00 0.00 38.43 3.20
2696 4415 5.011738 ACCACTAACAAAATTCGGAGAGAGA 59.988 40.000 0.00 0.00 38.43 3.10
2697 4416 6.109359 CCACTAACAAAATTCGGAGAGAGAT 58.891 40.000 0.00 0.00 38.43 2.75
2698 4417 7.093465 ACCACTAACAAAATTCGGAGAGAGATA 60.093 37.037 0.00 0.00 38.43 1.98
2699 4418 7.436673 CCACTAACAAAATTCGGAGAGAGATAG 59.563 40.741 0.00 0.00 38.43 2.08
2700 4419 6.981559 ACTAACAAAATTCGGAGAGAGATAGC 59.018 38.462 0.00 0.00 38.43 2.97
2701 4420 5.344743 ACAAAATTCGGAGAGAGATAGCA 57.655 39.130 0.00 0.00 38.43 3.49
2702 4421 5.923204 ACAAAATTCGGAGAGAGATAGCAT 58.077 37.500 0.00 0.00 38.43 3.79
2703 4422 7.055667 ACAAAATTCGGAGAGAGATAGCATA 57.944 36.000 0.00 0.00 38.43 3.14
2704 4423 6.926272 ACAAAATTCGGAGAGAGATAGCATAC 59.074 38.462 0.00 0.00 38.43 2.39
2705 4424 5.652994 AATTCGGAGAGAGATAGCATACC 57.347 43.478 0.00 0.00 38.43 2.73
2706 4425 4.374689 TTCGGAGAGAGATAGCATACCT 57.625 45.455 0.00 0.00 38.43 3.08
2707 4426 4.374689 TCGGAGAGAGATAGCATACCTT 57.625 45.455 0.00 0.00 0.00 3.50
2708 4427 4.328536 TCGGAGAGAGATAGCATACCTTC 58.671 47.826 0.00 0.00 0.00 3.46
2709 4428 3.126171 CGGAGAGAGATAGCATACCTTCG 59.874 52.174 0.00 0.00 0.00 3.79
2710 4429 3.119637 GGAGAGAGATAGCATACCTTCGC 60.120 52.174 0.00 0.00 0.00 4.70
2711 4430 3.491342 AGAGAGATAGCATACCTTCGCA 58.509 45.455 0.00 0.00 0.00 5.10
2712 4431 3.891977 AGAGAGATAGCATACCTTCGCAA 59.108 43.478 0.00 0.00 0.00 4.85
2713 4432 3.983741 AGAGATAGCATACCTTCGCAAC 58.016 45.455 0.00 0.00 0.00 4.17
2714 4433 3.384789 AGAGATAGCATACCTTCGCAACA 59.615 43.478 0.00 0.00 0.00 3.33
2715 4434 4.119862 GAGATAGCATACCTTCGCAACAA 58.880 43.478 0.00 0.00 0.00 2.83
2716 4435 3.871594 AGATAGCATACCTTCGCAACAAC 59.128 43.478 0.00 0.00 0.00 3.32
2717 4436 2.185004 AGCATACCTTCGCAACAACT 57.815 45.000 0.00 0.00 0.00 3.16
2718 4437 3.328382 AGCATACCTTCGCAACAACTA 57.672 42.857 0.00 0.00 0.00 2.24
2719 4438 3.873910 AGCATACCTTCGCAACAACTAT 58.126 40.909 0.00 0.00 0.00 2.12
2720 4439 4.261801 AGCATACCTTCGCAACAACTATT 58.738 39.130 0.00 0.00 0.00 1.73
2721 4440 5.424757 AGCATACCTTCGCAACAACTATTA 58.575 37.500 0.00 0.00 0.00 0.98
2722 4441 6.055588 AGCATACCTTCGCAACAACTATTAT 58.944 36.000 0.00 0.00 0.00 1.28
2723 4442 7.214381 AGCATACCTTCGCAACAACTATTATA 58.786 34.615 0.00 0.00 0.00 0.98
2724 4443 7.878127 AGCATACCTTCGCAACAACTATTATAT 59.122 33.333 0.00 0.00 0.00 0.86
2725 4444 8.504005 GCATACCTTCGCAACAACTATTATATT 58.496 33.333 0.00 0.00 0.00 1.28
2729 4448 9.567848 ACCTTCGCAACAACTATTATATTTTTG 57.432 29.630 0.00 0.00 0.00 2.44
2730 4449 9.019764 CCTTCGCAACAACTATTATATTTTTGG 57.980 33.333 0.00 0.00 0.00 3.28
2731 4450 8.918961 TTCGCAACAACTATTATATTTTTGGG 57.081 30.769 0.00 0.00 0.00 4.12
2732 4451 6.975772 TCGCAACAACTATTATATTTTTGGGC 59.024 34.615 0.00 0.00 0.00 5.36
2733 4452 6.978080 CGCAACAACTATTATATTTTTGGGCT 59.022 34.615 0.00 0.00 0.00 5.19
2734 4453 7.491048 CGCAACAACTATTATATTTTTGGGCTT 59.509 33.333 0.00 0.00 0.00 4.35
2735 4454 8.817100 GCAACAACTATTATATTTTTGGGCTTC 58.183 33.333 0.00 0.00 0.00 3.86
2739 4458 9.450807 CAACTATTATATTTTTGGGCTTCTTCG 57.549 33.333 0.00 0.00 0.00 3.79
2740 4459 8.747538 ACTATTATATTTTTGGGCTTCTTCGT 57.252 30.769 0.00 0.00 0.00 3.85
2741 4460 8.621286 ACTATTATATTTTTGGGCTTCTTCGTG 58.379 33.333 0.00 0.00 0.00 4.35
2742 4461 6.827586 TTATATTTTTGGGCTTCTTCGTGT 57.172 33.333 0.00 0.00 0.00 4.49
2743 4462 2.861462 TTTTTGGGCTTCTTCGTGTG 57.139 45.000 0.00 0.00 0.00 3.82
2744 4463 1.028905 TTTTGGGCTTCTTCGTGTGG 58.971 50.000 0.00 0.00 0.00 4.17
2745 4464 0.181587 TTTGGGCTTCTTCGTGTGGA 59.818 50.000 0.00 0.00 0.00 4.02
2746 4465 0.400213 TTGGGCTTCTTCGTGTGGAT 59.600 50.000 0.00 0.00 0.00 3.41
2747 4466 0.321564 TGGGCTTCTTCGTGTGGATG 60.322 55.000 0.00 0.00 0.00 3.51
2748 4467 0.036388 GGGCTTCTTCGTGTGGATGA 60.036 55.000 0.00 0.00 0.00 2.92
2749 4468 1.610624 GGGCTTCTTCGTGTGGATGAA 60.611 52.381 0.00 0.00 36.71 2.57
2750 4469 1.464997 GGCTTCTTCGTGTGGATGAAC 59.535 52.381 0.00 0.00 34.82 3.18
2751 4470 2.143122 GCTTCTTCGTGTGGATGAACA 58.857 47.619 0.00 0.00 34.82 3.18
2752 4471 2.744202 GCTTCTTCGTGTGGATGAACAT 59.256 45.455 0.00 0.00 34.82 2.71
2753 4472 3.189287 GCTTCTTCGTGTGGATGAACATT 59.811 43.478 0.00 0.00 34.82 2.71
2754 4473 4.670221 GCTTCTTCGTGTGGATGAACATTC 60.670 45.833 0.00 0.00 34.82 2.67
2755 4474 4.001618 TCTTCGTGTGGATGAACATTCA 57.998 40.909 0.00 0.00 42.14 2.57
2756 4475 3.745975 TCTTCGTGTGGATGAACATTCAC 59.254 43.478 16.58 16.58 45.45 3.18
2764 4483 4.853196 GTGGATGAACATTCACATTCAACG 59.147 41.667 18.01 0.00 44.78 4.10
2765 4484 4.082841 TGGATGAACATTCACATTCAACGG 60.083 41.667 0.00 0.00 40.49 4.44
2766 4485 4.155826 GGATGAACATTCACATTCAACGGA 59.844 41.667 0.00 0.00 40.49 4.69
2767 4486 5.335583 GGATGAACATTCACATTCAACGGAA 60.336 40.000 0.00 0.00 40.49 4.30
2768 4487 5.107109 TGAACATTCACATTCAACGGAAG 57.893 39.130 0.00 0.00 32.09 3.46
2769 4488 4.578516 TGAACATTCACATTCAACGGAAGT 59.421 37.500 0.00 0.00 38.05 3.01
2770 4489 5.505489 TGAACATTCACATTCAACGGAAGTG 60.505 40.000 0.00 0.00 36.92 3.16
2771 4490 7.624682 TGAACATTCACATTCAACGGAAGTGA 61.625 38.462 0.00 0.00 38.36 3.41
2772 4491 8.862084 TGAACATTCACATTCAACGGAAGTGAT 61.862 37.037 0.00 0.00 39.09 3.06
2787 4506 8.980481 ACGGAAGTGATCTATTTGGATATTTT 57.020 30.769 0.00 0.00 46.97 1.82
2788 4507 9.408648 ACGGAAGTGATCTATTTGGATATTTTT 57.591 29.630 0.00 0.00 46.97 1.94
2829 4548 7.443259 TGTACTAAAATAGTGTTTTGGCTCC 57.557 36.000 7.77 0.00 39.81 4.70
2830 4549 5.977489 ACTAAAATAGTGTTTTGGCTCCC 57.023 39.130 7.77 0.00 37.69 4.30
2831 4550 4.770531 ACTAAAATAGTGTTTTGGCTCCCC 59.229 41.667 7.77 0.00 37.69 4.81
2832 4551 2.990740 AATAGTGTTTTGGCTCCCCA 57.009 45.000 0.00 0.00 40.06 4.96
2833 4552 2.215942 ATAGTGTTTTGGCTCCCCAC 57.784 50.000 0.00 0.00 41.97 4.61
2834 4553 0.250553 TAGTGTTTTGGCTCCCCACG 60.251 55.000 0.00 0.00 41.97 4.94
2835 4554 1.826487 GTGTTTTGGCTCCCCACGT 60.826 57.895 0.00 0.00 41.97 4.49
2836 4555 1.076632 TGTTTTGGCTCCCCACGTT 60.077 52.632 0.00 0.00 41.97 3.99
2837 4556 1.104577 TGTTTTGGCTCCCCACGTTC 61.105 55.000 0.00 0.00 41.97 3.95
2838 4557 1.529713 TTTTGGCTCCCCACGTTCC 60.530 57.895 0.00 0.00 41.97 3.62
2839 4558 2.002018 TTTTGGCTCCCCACGTTCCT 62.002 55.000 0.00 0.00 41.97 3.36
2840 4559 2.002018 TTTGGCTCCCCACGTTCCTT 62.002 55.000 0.00 0.00 41.97 3.36
2841 4560 2.359975 GGCTCCCCACGTTCCTTG 60.360 66.667 0.00 0.00 0.00 3.61
2842 4561 2.430367 GCTCCCCACGTTCCTTGT 59.570 61.111 0.00 0.00 0.00 3.16
2843 4562 1.228154 GCTCCCCACGTTCCTTGTT 60.228 57.895 0.00 0.00 0.00 2.83
2844 4563 0.822121 GCTCCCCACGTTCCTTGTTT 60.822 55.000 0.00 0.00 0.00 2.83
2845 4564 1.543871 GCTCCCCACGTTCCTTGTTTA 60.544 52.381 0.00 0.00 0.00 2.01
2846 4565 2.853705 CTCCCCACGTTCCTTGTTTAA 58.146 47.619 0.00 0.00 0.00 1.52
2847 4566 3.215975 CTCCCCACGTTCCTTGTTTAAA 58.784 45.455 0.00 0.00 0.00 1.52
2848 4567 3.629087 TCCCCACGTTCCTTGTTTAAAA 58.371 40.909 0.00 0.00 0.00 1.52
2849 4568 3.380954 TCCCCACGTTCCTTGTTTAAAAC 59.619 43.478 0.00 0.00 0.00 2.43
2850 4569 3.130693 CCCCACGTTCCTTGTTTAAAACA 59.869 43.478 0.00 0.00 40.21 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 182 4.454678 TGTTGTGACTTTTCTGAGAGCAT 58.545 39.130 0.00 0.00 0.00 3.79
325 326 3.246936 GTCAACTCCGAAACTAACACCAC 59.753 47.826 0.00 0.00 0.00 4.16
411 412 5.369699 AGCACCCTGTATAACATACATCCTT 59.630 40.000 0.00 0.00 0.00 3.36
457 458 3.686016 TCTGTCCATTTGTAGAAAGGCC 58.314 45.455 0.00 0.00 0.00 5.19
571 582 7.242783 CAGCTTATCTTTTTCTTCTTGCTCTC 58.757 38.462 0.00 0.00 0.00 3.20
628 639 3.614092 AGGTTGACTTGCCACATCTATG 58.386 45.455 0.00 0.00 0.00 2.23
641 652 5.794894 CAGATACACCTAACAAGGTTGACT 58.205 41.667 0.00 0.00 40.85 3.41
688 2389 1.153667 CTGGCAGAGAAGCTCGACC 60.154 63.158 9.42 0.00 35.36 4.79
754 2455 2.562738 TCAGATCCGATCACTGTGTGTT 59.437 45.455 11.01 0.00 34.79 3.32
772 2473 1.086696 CCATTGTAACGGGTGCTCAG 58.913 55.000 0.00 0.00 0.00 3.35
778 2489 1.530323 GCTCAACCATTGTAACGGGT 58.470 50.000 0.00 0.00 36.19 5.28
779 2490 0.808755 GGCTCAACCATTGTAACGGG 59.191 55.000 0.00 0.00 38.86 5.28
780 2491 1.737793 GAGGCTCAACCATTGTAACGG 59.262 52.381 10.25 0.00 43.14 4.44
781 2492 1.393539 CGAGGCTCAACCATTGTAACG 59.606 52.381 15.95 0.00 43.14 3.18
782 2493 1.130561 GCGAGGCTCAACCATTGTAAC 59.869 52.381 15.95 0.00 43.14 2.50
783 2494 1.271108 TGCGAGGCTCAACCATTGTAA 60.271 47.619 15.95 0.00 43.14 2.41
784 2495 0.323302 TGCGAGGCTCAACCATTGTA 59.677 50.000 15.95 0.00 43.14 2.41
785 2496 0.957395 CTGCGAGGCTCAACCATTGT 60.957 55.000 15.95 0.00 43.14 2.71
786 2497 0.674581 TCTGCGAGGCTCAACCATTG 60.675 55.000 15.95 0.00 43.14 2.82
787 2498 0.674895 GTCTGCGAGGCTCAACCATT 60.675 55.000 15.95 0.00 43.14 3.16
788 2499 1.078848 GTCTGCGAGGCTCAACCAT 60.079 57.895 15.95 0.00 43.14 3.55
789 2500 2.343758 GTCTGCGAGGCTCAACCA 59.656 61.111 15.95 7.28 43.14 3.67
790 2501 1.739562 CTGTCTGCGAGGCTCAACC 60.740 63.158 15.95 2.59 39.61 3.77
791 2502 1.011451 GTCTGTCTGCGAGGCTCAAC 61.011 60.000 15.95 6.44 0.00 3.18
792 2503 1.181741 AGTCTGTCTGCGAGGCTCAA 61.182 55.000 15.95 0.65 0.00 3.02
793 2504 1.604879 AGTCTGTCTGCGAGGCTCA 60.605 57.895 15.95 0.00 0.00 4.26
794 2505 1.153862 CAGTCTGTCTGCGAGGCTC 60.154 63.158 3.87 3.87 37.36 4.70
795 2506 2.969016 CAGTCTGTCTGCGAGGCT 59.031 61.111 0.00 0.00 37.36 4.58
815 2526 0.604578 GCATCTGCATGGTTTGTGGT 59.395 50.000 0.00 0.00 41.59 4.16
1066 2784 3.331889 AGGATTCTGGTGATGTTGAAGGT 59.668 43.478 0.00 0.00 0.00 3.50
1146 2864 2.582498 CGGCGGTTGATCTCGTCC 60.582 66.667 0.00 1.65 0.00 4.79
1227 2945 1.450312 CACCTTCCGCTGGATGTCC 60.450 63.158 0.00 0.00 0.00 4.02
1231 2949 2.586792 GAGCACCTTCCGCTGGAT 59.413 61.111 0.00 0.00 40.63 3.41
1568 3286 2.741878 GCTGGCGCAGGAATCTTAGTAA 60.742 50.000 10.83 0.00 35.78 2.24
1672 3390 2.048503 GTCGGCAGGTGCGTTAGT 60.049 61.111 0.00 0.00 43.26 2.24
1773 3491 0.733909 CGTCGCTGCTCTTGTCATCA 60.734 55.000 0.00 0.00 0.00 3.07
1774 3492 0.456824 TCGTCGCTGCTCTTGTCATC 60.457 55.000 0.00 0.00 0.00 2.92
1775 3493 0.734253 GTCGTCGCTGCTCTTGTCAT 60.734 55.000 0.00 0.00 0.00 3.06
1776 3494 1.371758 GTCGTCGCTGCTCTTGTCA 60.372 57.895 0.00 0.00 0.00 3.58
1885 3603 4.650754 ATCTAACCTACTTGTACGCAGG 57.349 45.455 0.00 0.00 0.00 4.85
1908 3626 1.202592 TCGTAGTGCTGCTTTGAACCA 60.203 47.619 0.00 0.00 0.00 3.67
1979 3698 2.047061 AGTGTGCCTTCTCTTGGTACA 58.953 47.619 0.00 0.00 45.40 2.90
1980 3699 2.417719 CAGTGTGCCTTCTCTTGGTAC 58.582 52.381 0.00 0.00 39.99 3.34
1981 3700 1.347707 CCAGTGTGCCTTCTCTTGGTA 59.652 52.381 0.00 0.00 0.00 3.25
1982 3701 0.109342 CCAGTGTGCCTTCTCTTGGT 59.891 55.000 0.00 0.00 0.00 3.67
1983 3702 1.239968 GCCAGTGTGCCTTCTCTTGG 61.240 60.000 0.00 0.00 0.00 3.61
2026 3745 3.752412 AAAAAGTAAATCGCCTACGGC 57.248 42.857 0.00 0.00 46.75 5.68
2046 3765 7.860373 GCTTGTGTATGTACTGATGTTCAAAAA 59.140 33.333 0.00 0.00 0.00 1.94
2047 3766 7.359595 GCTTGTGTATGTACTGATGTTCAAAA 58.640 34.615 0.00 0.00 0.00 2.44
2048 3767 6.347321 CGCTTGTGTATGTACTGATGTTCAAA 60.347 38.462 0.00 0.00 0.00 2.69
2049 3768 5.120053 CGCTTGTGTATGTACTGATGTTCAA 59.880 40.000 0.00 0.00 0.00 2.69
2050 3769 4.625311 CGCTTGTGTATGTACTGATGTTCA 59.375 41.667 0.00 0.00 0.00 3.18
2051 3770 4.492570 GCGCTTGTGTATGTACTGATGTTC 60.493 45.833 0.00 0.00 0.00 3.18
2052 3771 3.370978 GCGCTTGTGTATGTACTGATGTT 59.629 43.478 0.00 0.00 0.00 2.71
2053 3772 2.930040 GCGCTTGTGTATGTACTGATGT 59.070 45.455 0.00 0.00 0.00 3.06
2054 3773 3.190079 AGCGCTTGTGTATGTACTGATG 58.810 45.455 2.64 0.00 0.00 3.07
2055 3774 3.119137 TGAGCGCTTGTGTATGTACTGAT 60.119 43.478 13.26 0.00 0.00 2.90
2056 3775 2.230266 TGAGCGCTTGTGTATGTACTGA 59.770 45.455 13.26 0.00 0.00 3.41
2057 3776 2.606108 TGAGCGCTTGTGTATGTACTG 58.394 47.619 13.26 0.00 0.00 2.74
2058 3777 3.526931 ATGAGCGCTTGTGTATGTACT 57.473 42.857 13.26 0.00 0.00 2.73
2059 3778 5.918576 TGTATATGAGCGCTTGTGTATGTAC 59.081 40.000 13.26 13.66 0.00 2.90
2060 3779 5.918576 GTGTATATGAGCGCTTGTGTATGTA 59.081 40.000 13.26 1.96 0.00 2.29
2061 3780 4.745125 GTGTATATGAGCGCTTGTGTATGT 59.255 41.667 13.26 2.92 0.00 2.29
2062 3781 4.143535 CGTGTATATGAGCGCTTGTGTATG 60.144 45.833 13.26 0.00 0.00 2.39
2063 3782 3.981416 CGTGTATATGAGCGCTTGTGTAT 59.019 43.478 13.26 10.35 0.00 2.29
2064 3783 3.368495 CGTGTATATGAGCGCTTGTGTA 58.632 45.455 13.26 3.18 0.00 2.90
2065 3784 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
2066 3785 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
2067 3786 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
2068 3787 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
2069 3788 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
2070 3789 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
2073 3792 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
2074 3793 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
2075 3794 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
2076 3795 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
2077 3796 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
2078 3797 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
2079 3798 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
2080 3799 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
2081 3800 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
2082 3801 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
2083 3802 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
2084 3803 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
2085 3804 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
2086 3805 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
2087 3806 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
2088 3807 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
2089 3808 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
2090 3809 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
2091 3810 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
2092 3811 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
2093 3812 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
2094 3813 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
2095 3814 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
2096 3815 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
2097 3816 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
2098 3817 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
2099 3818 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
2100 3819 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
2101 3820 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
2102 3821 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
2103 3822 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
2104 3823 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
2105 3824 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
2106 3825 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
2109 3828 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
2110 3829 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
2111 3830 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
2112 3831 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
2113 3832 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
2114 3833 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
2115 3834 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
2116 3835 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
2117 3836 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
2118 3837 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
2119 3838 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
2120 3839 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
2121 3840 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
2122 3841 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
2123 3842 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
2124 3843 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
2125 3844 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
2126 3845 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
2127 3846 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
2128 3847 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
2129 3848 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
2130 3849 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
2131 3850 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
2132 3851 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
2133 3852 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
2134 3853 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
2135 3854 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
2136 3855 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
2137 3856 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
2138 3857 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
2139 3858 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
2140 3859 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
2141 3860 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
2142 3861 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
2143 3862 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
2144 3863 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
2145 3864 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
2146 3865 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
2147 3866 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
2148 3867 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2149 3868 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2150 3869 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2151 3870 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2152 3871 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
2153 3872 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
2154 3873 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
2155 3874 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
2156 3875 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
2157 3876 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
2158 3877 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
2159 3878 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
2160 3879 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
2161 3880 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
2162 3881 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
2163 3882 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
2164 3883 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
2165 3884 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
2166 3885 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
2167 3886 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
2168 3887 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
2169 3888 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
2170 3889 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
2171 3890 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
2172 3891 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
2173 3892 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
2174 3893 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
2175 3894 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
2176 3895 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
2177 3896 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
2178 3897 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
2179 3898 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
2182 3901 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
2184 3903 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
2187 3906 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
2210 3929 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
2211 3930 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
2212 3931 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
2213 3932 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
2214 3933 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
2215 3934 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
2216 3935 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
2217 3936 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
2218 3937 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
2219 3938 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
2220 3939 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
2221 3940 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
2232 3951 1.010797 CAGGATTTTCGGCGATGCG 60.011 57.895 11.76 0.00 0.00 4.73
2233 3952 0.732571 TTCAGGATTTTCGGCGATGC 59.267 50.000 11.76 0.31 0.00 3.91
2234 3953 3.698029 ATTTCAGGATTTTCGGCGATG 57.302 42.857 11.76 4.79 0.00 3.84
2235 3954 5.828299 TTTATTTCAGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
2236 3955 5.220970 GGATTTATTTCAGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
2237 3956 4.976116 GGATTTATTTCAGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
2238 3957 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
2239 3958 7.100458 ACTGGATTTATTTCAGGATTTTCGG 57.900 36.000 0.00 0.00 33.19 4.30
2247 3966 9.398170 CGCATTTATTACTGGATTTATTTCAGG 57.602 33.333 0.00 0.00 33.19 3.86
2250 3969 9.118236 GCTCGCATTTATTACTGGATTTATTTC 57.882 33.333 0.00 0.00 0.00 2.17
2251 3970 8.629158 TGCTCGCATTTATTACTGGATTTATTT 58.371 29.630 0.00 0.00 0.00 1.40
2252 3971 8.076178 GTGCTCGCATTTATTACTGGATTTATT 58.924 33.333 0.00 0.00 0.00 1.40
2253 3972 7.308589 GGTGCTCGCATTTATTACTGGATTTAT 60.309 37.037 0.00 0.00 0.00 1.40
2254 3973 6.017440 GGTGCTCGCATTTATTACTGGATTTA 60.017 38.462 0.00 0.00 0.00 1.40
2255 3974 5.221048 GGTGCTCGCATTTATTACTGGATTT 60.221 40.000 0.00 0.00 0.00 2.17
2256 3975 4.275936 GGTGCTCGCATTTATTACTGGATT 59.724 41.667 0.00 0.00 0.00 3.01
2257 3976 3.815401 GGTGCTCGCATTTATTACTGGAT 59.185 43.478 0.00 0.00 0.00 3.41
2258 3977 3.202906 GGTGCTCGCATTTATTACTGGA 58.797 45.455 0.00 0.00 0.00 3.86
2259 3978 2.942376 TGGTGCTCGCATTTATTACTGG 59.058 45.455 0.00 0.00 0.00 4.00
2260 3979 3.002656 CCTGGTGCTCGCATTTATTACTG 59.997 47.826 0.00 0.00 0.00 2.74
2261 3980 3.118408 TCCTGGTGCTCGCATTTATTACT 60.118 43.478 0.00 0.00 0.00 2.24
2262 3981 3.202906 TCCTGGTGCTCGCATTTATTAC 58.797 45.455 0.00 0.00 0.00 1.89
2263 3982 3.552132 TCCTGGTGCTCGCATTTATTA 57.448 42.857 0.00 0.00 0.00 0.98
2264 3983 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
2265 3984 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
2266 3985 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
2267 3986 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
2268 3987 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
2269 3988 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
2270 3989 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
2271 3990 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
2272 3991 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
2273 3992 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
2274 3993 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
2275 3994 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
2291 4010 2.368192 TATCCCCAGCCCACCAGG 60.368 66.667 0.00 0.00 39.47 4.45
2292 4011 2.757124 GGTATCCCCAGCCCACCAG 61.757 68.421 0.00 0.00 0.00 4.00
2293 4012 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
2294 4013 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
2295 4014 2.270874 CTGTGGTATCCCCAGCCCAC 62.271 65.000 0.00 0.00 46.45 4.61
2296 4015 2.000701 CTGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
2297 4016 1.984288 GACTGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
2298 4017 1.527370 GACTGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
2299 4018 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
2304 4023 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
2305 4024 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
2306 4025 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
2307 4026 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
2308 4027 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
2309 4028 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
2310 4029 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
2311 4030 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
2312 4031 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
2314 4033 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
2315 4034 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
2316 4035 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
2317 4036 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
2318 4037 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
2319 4038 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
2320 4039 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
2333 4052 4.025401 GGCGCGAACCAACCTGTG 62.025 66.667 12.10 0.00 0.00 3.66
2336 4055 3.927163 CTACGGCGCGAACCAACCT 62.927 63.158 12.10 0.00 0.00 3.50
2337 4056 3.484547 CTACGGCGCGAACCAACC 61.485 66.667 12.10 0.00 0.00 3.77
2338 4057 3.484547 CCTACGGCGCGAACCAAC 61.485 66.667 12.10 0.00 0.00 3.77
2425 4144 2.015627 CAACGCACGGGCATTTGTG 61.016 57.895 11.77 0.00 41.24 3.33
2426 4145 2.334653 CAACGCACGGGCATTTGT 59.665 55.556 11.77 0.00 41.24 2.83
2427 4146 3.105157 GCAACGCACGGGCATTTG 61.105 61.111 11.77 13.80 41.24 2.32
2428 4147 2.433231 ATTGCAACGCACGGGCATTT 62.433 50.000 11.77 0.00 38.71 2.32
2429 4148 2.929903 ATTGCAACGCACGGGCATT 61.930 52.632 11.77 0.00 38.71 3.56
2430 4149 3.372730 ATTGCAACGCACGGGCAT 61.373 55.556 11.77 0.00 38.71 4.40
2431 4150 4.340019 CATTGCAACGCACGGGCA 62.340 61.111 11.77 7.43 38.71 5.36
2433 4152 4.418401 CCCATTGCAACGCACGGG 62.418 66.667 0.00 3.16 42.59 5.28
2434 4153 4.418401 CCCCATTGCAACGCACGG 62.418 66.667 0.00 0.00 38.71 4.94
2435 4154 2.413437 TTTCCCCATTGCAACGCACG 62.413 55.000 0.00 0.00 38.71 5.34
2436 4155 0.249657 TTTTCCCCATTGCAACGCAC 60.250 50.000 0.00 0.00 38.71 5.34
2437 4156 0.465705 TTTTTCCCCATTGCAACGCA 59.534 45.000 0.00 0.00 36.47 5.24
2438 4157 1.807139 ATTTTTCCCCATTGCAACGC 58.193 45.000 0.00 0.00 0.00 4.84
2439 4158 4.186856 ACTATTTTTCCCCATTGCAACG 57.813 40.909 0.00 0.00 0.00 4.10
2440 4159 8.560355 AATAAACTATTTTTCCCCATTGCAAC 57.440 30.769 0.00 0.00 0.00 4.17
2441 4160 9.579932 AAAATAAACTATTTTTCCCCATTGCAA 57.420 25.926 0.00 0.00 43.71 4.08
2442 4161 9.225436 GAAAATAAACTATTTTTCCCCATTGCA 57.775 29.630 5.99 0.00 45.52 4.08
2443 4162 9.225436 TGAAAATAAACTATTTTTCCCCATTGC 57.775 29.630 5.99 0.00 45.52 3.56
2483 4202 9.847706 ACAACGAATGTATTTTTGCACATATTA 57.152 25.926 0.00 0.00 41.63 0.98
2484 4203 8.755696 ACAACGAATGTATTTTTGCACATATT 57.244 26.923 0.00 0.00 41.63 1.28
2485 4204 8.755696 AACAACGAATGTATTTTTGCACATAT 57.244 26.923 0.00 0.00 42.99 1.78
2486 4205 7.862873 TGAACAACGAATGTATTTTTGCACATA 59.137 29.630 0.00 0.00 42.99 2.29
2487 4206 6.699204 TGAACAACGAATGTATTTTTGCACAT 59.301 30.769 0.00 0.00 42.99 3.21
2488 4207 6.036470 TGAACAACGAATGTATTTTTGCACA 58.964 32.000 0.00 0.00 42.99 4.57
2489 4208 6.503616 TGAACAACGAATGTATTTTTGCAC 57.496 33.333 0.00 0.00 42.99 4.57
2490 4209 6.346439 GCATGAACAACGAATGTATTTTTGCA 60.346 34.615 0.00 0.00 42.99 4.08
2491 4210 6.008875 GCATGAACAACGAATGTATTTTTGC 58.991 36.000 0.00 0.00 42.99 3.68
2492 4211 7.103159 TGCATGAACAACGAATGTATTTTTG 57.897 32.000 0.00 0.00 42.99 2.44
2493 4212 7.706281 TTGCATGAACAACGAATGTATTTTT 57.294 28.000 0.00 0.00 42.99 1.94
2494 4213 7.706281 TTTGCATGAACAACGAATGTATTTT 57.294 28.000 0.00 0.00 42.99 1.82
2495 4214 7.887996 ATTTGCATGAACAACGAATGTATTT 57.112 28.000 0.00 0.00 42.99 1.40
2496 4215 7.887996 AATTTGCATGAACAACGAATGTATT 57.112 28.000 0.00 0.00 42.99 1.89
2497 4216 7.887996 AAATTTGCATGAACAACGAATGTAT 57.112 28.000 0.00 0.00 42.99 2.29
2498 4217 7.706281 AAAATTTGCATGAACAACGAATGTA 57.294 28.000 0.00 0.00 42.99 2.29
2499 4218 6.601741 AAAATTTGCATGAACAACGAATGT 57.398 29.167 0.00 0.00 46.82 2.71
2500 4219 7.786114 ACTAAAATTTGCATGAACAACGAATG 58.214 30.769 0.00 0.00 0.00 2.67
2501 4220 7.651304 TGACTAAAATTTGCATGAACAACGAAT 59.349 29.630 0.00 0.00 0.00 3.34
2502 4221 6.975197 TGACTAAAATTTGCATGAACAACGAA 59.025 30.769 0.00 0.00 0.00 3.85
2503 4222 6.499172 TGACTAAAATTTGCATGAACAACGA 58.501 32.000 0.00 0.00 0.00 3.85
2504 4223 6.746104 TGACTAAAATTTGCATGAACAACG 57.254 33.333 0.00 0.00 0.00 4.10
2505 4224 9.934190 AAATTGACTAAAATTTGCATGAACAAC 57.066 25.926 0.00 0.00 38.12 3.32
2539 4258 9.768662 GCATGTCCTATTTCAATAATTTTGGAT 57.231 29.630 0.00 0.00 0.00 3.41
2540 4259 8.980596 AGCATGTCCTATTTCAATAATTTTGGA 58.019 29.630 0.00 0.00 0.00 3.53
2651 4370 7.888546 AGTGGTATTGGCTAAACTTTATCAAGT 59.111 33.333 0.00 0.00 45.89 3.16
2652 4371 8.281212 AGTGGTATTGGCTAAACTTTATCAAG 57.719 34.615 0.00 0.00 35.92 3.02
2653 4372 9.742144 TTAGTGGTATTGGCTAAACTTTATCAA 57.258 29.630 0.00 0.00 0.00 2.57
2654 4373 9.169592 GTTAGTGGTATTGGCTAAACTTTATCA 57.830 33.333 0.00 0.00 0.00 2.15
2655 4374 9.169592 TGTTAGTGGTATTGGCTAAACTTTATC 57.830 33.333 0.00 0.00 0.00 1.75
2656 4375 9.523168 TTGTTAGTGGTATTGGCTAAACTTTAT 57.477 29.630 0.00 0.00 0.00 1.40
2657 4376 8.921353 TTGTTAGTGGTATTGGCTAAACTTTA 57.079 30.769 0.00 0.00 0.00 1.85
2658 4377 7.826918 TTGTTAGTGGTATTGGCTAAACTTT 57.173 32.000 0.00 0.00 0.00 2.66
2659 4378 7.826918 TTTGTTAGTGGTATTGGCTAAACTT 57.173 32.000 0.00 0.00 0.00 2.66
2660 4379 7.826918 TTTTGTTAGTGGTATTGGCTAAACT 57.173 32.000 0.00 0.00 0.00 2.66
2661 4380 9.135843 GAATTTTGTTAGTGGTATTGGCTAAAC 57.864 33.333 0.00 0.00 0.00 2.01
2662 4381 8.024285 CGAATTTTGTTAGTGGTATTGGCTAAA 58.976 33.333 0.00 0.00 0.00 1.85
2663 4382 7.362229 CCGAATTTTGTTAGTGGTATTGGCTAA 60.362 37.037 0.00 0.00 0.00 3.09
2664 4383 6.094325 CCGAATTTTGTTAGTGGTATTGGCTA 59.906 38.462 0.00 0.00 0.00 3.93
2665 4384 5.105917 CCGAATTTTGTTAGTGGTATTGGCT 60.106 40.000 0.00 0.00 0.00 4.75
2666 4385 5.099575 CCGAATTTTGTTAGTGGTATTGGC 58.900 41.667 0.00 0.00 0.00 4.52
2667 4386 6.373216 TCTCCGAATTTTGTTAGTGGTATTGG 59.627 38.462 0.00 0.00 0.00 3.16
2668 4387 7.333423 TCTCTCCGAATTTTGTTAGTGGTATTG 59.667 37.037 0.00 0.00 0.00 1.90
2669 4388 7.391620 TCTCTCCGAATTTTGTTAGTGGTATT 58.608 34.615 0.00 0.00 0.00 1.89
2670 4389 6.942976 TCTCTCCGAATTTTGTTAGTGGTAT 58.057 36.000 0.00 0.00 0.00 2.73
2671 4390 6.209986 TCTCTCTCCGAATTTTGTTAGTGGTA 59.790 38.462 0.00 0.00 0.00 3.25
2672 4391 5.011738 TCTCTCTCCGAATTTTGTTAGTGGT 59.988 40.000 0.00 0.00 0.00 4.16
2673 4392 5.479306 TCTCTCTCCGAATTTTGTTAGTGG 58.521 41.667 0.00 0.00 0.00 4.00
2674 4393 7.043059 GCTATCTCTCTCCGAATTTTGTTAGTG 60.043 40.741 0.00 0.00 0.00 2.74
2675 4394 6.981559 GCTATCTCTCTCCGAATTTTGTTAGT 59.018 38.462 0.00 0.00 0.00 2.24
2676 4395 6.980978 TGCTATCTCTCTCCGAATTTTGTTAG 59.019 38.462 0.00 0.00 0.00 2.34
2677 4396 6.873997 TGCTATCTCTCTCCGAATTTTGTTA 58.126 36.000 0.00 0.00 0.00 2.41
2678 4397 5.734720 TGCTATCTCTCTCCGAATTTTGTT 58.265 37.500 0.00 0.00 0.00 2.83
2679 4398 5.344743 TGCTATCTCTCTCCGAATTTTGT 57.655 39.130 0.00 0.00 0.00 2.83
2680 4399 6.367422 GGTATGCTATCTCTCTCCGAATTTTG 59.633 42.308 0.00 0.00 0.00 2.44
2681 4400 6.268847 AGGTATGCTATCTCTCTCCGAATTTT 59.731 38.462 0.00 0.00 0.00 1.82
2682 4401 5.777732 AGGTATGCTATCTCTCTCCGAATTT 59.222 40.000 0.00 0.00 0.00 1.82
2683 4402 5.329399 AGGTATGCTATCTCTCTCCGAATT 58.671 41.667 0.00 0.00 0.00 2.17
2684 4403 4.929479 AGGTATGCTATCTCTCTCCGAAT 58.071 43.478 0.00 0.00 0.00 3.34
2685 4404 4.374689 AGGTATGCTATCTCTCTCCGAA 57.625 45.455 0.00 0.00 0.00 4.30
2686 4405 4.328536 GAAGGTATGCTATCTCTCTCCGA 58.671 47.826 0.00 0.00 0.00 4.55
2687 4406 3.126171 CGAAGGTATGCTATCTCTCTCCG 59.874 52.174 0.00 0.00 0.00 4.63
2688 4407 3.119637 GCGAAGGTATGCTATCTCTCTCC 60.120 52.174 0.00 0.00 0.00 3.71
2689 4408 3.504134 TGCGAAGGTATGCTATCTCTCTC 59.496 47.826 0.00 0.00 0.00 3.20
2690 4409 3.491342 TGCGAAGGTATGCTATCTCTCT 58.509 45.455 0.00 0.00 0.00 3.10
2691 4410 3.924918 TGCGAAGGTATGCTATCTCTC 57.075 47.619 0.00 0.00 0.00 3.20
2692 4411 3.384789 TGTTGCGAAGGTATGCTATCTCT 59.615 43.478 0.00 0.00 0.00 3.10
2693 4412 3.717707 TGTTGCGAAGGTATGCTATCTC 58.282 45.455 0.00 0.00 0.00 2.75
2694 4413 3.819564 TGTTGCGAAGGTATGCTATCT 57.180 42.857 0.00 0.00 0.00 1.98
2695 4414 3.871594 AGTTGTTGCGAAGGTATGCTATC 59.128 43.478 0.00 0.00 0.00 2.08
2696 4415 3.873910 AGTTGTTGCGAAGGTATGCTAT 58.126 40.909 0.00 0.00 0.00 2.97
2697 4416 3.328382 AGTTGTTGCGAAGGTATGCTA 57.672 42.857 0.00 0.00 0.00 3.49
2698 4417 2.185004 AGTTGTTGCGAAGGTATGCT 57.815 45.000 0.00 0.00 0.00 3.79
2699 4418 4.616181 AATAGTTGTTGCGAAGGTATGC 57.384 40.909 0.00 0.00 0.00 3.14
2703 4422 9.567848 CAAAAATATAATAGTTGTTGCGAAGGT 57.432 29.630 0.00 0.00 0.00 3.50
2704 4423 9.019764 CCAAAAATATAATAGTTGTTGCGAAGG 57.980 33.333 0.00 0.00 0.00 3.46
2705 4424 9.019764 CCCAAAAATATAATAGTTGTTGCGAAG 57.980 33.333 0.00 0.00 0.00 3.79
2706 4425 7.489757 GCCCAAAAATATAATAGTTGTTGCGAA 59.510 33.333 0.00 0.00 0.00 4.70
2707 4426 6.975772 GCCCAAAAATATAATAGTTGTTGCGA 59.024 34.615 0.00 0.00 0.00 5.10
2708 4427 6.978080 AGCCCAAAAATATAATAGTTGTTGCG 59.022 34.615 0.00 0.00 0.00 4.85
2709 4428 8.716646 AAGCCCAAAAATATAATAGTTGTTGC 57.283 30.769 0.00 0.00 0.00 4.17
2713 4432 9.450807 CGAAGAAGCCCAAAAATATAATAGTTG 57.549 33.333 0.00 0.00 0.00 3.16
2714 4433 9.185680 ACGAAGAAGCCCAAAAATATAATAGTT 57.814 29.630 0.00 0.00 0.00 2.24
2715 4434 8.621286 CACGAAGAAGCCCAAAAATATAATAGT 58.379 33.333 0.00 0.00 0.00 2.12
2716 4435 8.621286 ACACGAAGAAGCCCAAAAATATAATAG 58.379 33.333 0.00 0.00 0.00 1.73
2717 4436 8.402472 CACACGAAGAAGCCCAAAAATATAATA 58.598 33.333 0.00 0.00 0.00 0.98
2718 4437 7.257722 CACACGAAGAAGCCCAAAAATATAAT 58.742 34.615 0.00 0.00 0.00 1.28
2719 4438 6.349777 CCACACGAAGAAGCCCAAAAATATAA 60.350 38.462 0.00 0.00 0.00 0.98
2720 4439 5.124776 CCACACGAAGAAGCCCAAAAATATA 59.875 40.000 0.00 0.00 0.00 0.86
2721 4440 4.082245 CCACACGAAGAAGCCCAAAAATAT 60.082 41.667 0.00 0.00 0.00 1.28
2722 4441 3.254657 CCACACGAAGAAGCCCAAAAATA 59.745 43.478 0.00 0.00 0.00 1.40
2723 4442 2.035832 CCACACGAAGAAGCCCAAAAAT 59.964 45.455 0.00 0.00 0.00 1.82
2724 4443 1.407258 CCACACGAAGAAGCCCAAAAA 59.593 47.619 0.00 0.00 0.00 1.94
2725 4444 1.028905 CCACACGAAGAAGCCCAAAA 58.971 50.000 0.00 0.00 0.00 2.44
2726 4445 0.181587 TCCACACGAAGAAGCCCAAA 59.818 50.000 0.00 0.00 0.00 3.28
2727 4446 0.400213 ATCCACACGAAGAAGCCCAA 59.600 50.000 0.00 0.00 0.00 4.12
2728 4447 0.321564 CATCCACACGAAGAAGCCCA 60.322 55.000 0.00 0.00 0.00 5.36
2729 4448 0.036388 TCATCCACACGAAGAAGCCC 60.036 55.000 0.00 0.00 0.00 5.19
2730 4449 1.464997 GTTCATCCACACGAAGAAGCC 59.535 52.381 0.00 0.00 29.14 4.35
2731 4450 2.143122 TGTTCATCCACACGAAGAAGC 58.857 47.619 0.00 0.00 29.14 3.86
2732 4451 4.452114 TGAATGTTCATCCACACGAAGAAG 59.548 41.667 0.00 0.00 29.14 2.85
2733 4452 4.213270 GTGAATGTTCATCCACACGAAGAA 59.787 41.667 0.00 0.00 39.73 2.52
2734 4453 3.745975 GTGAATGTTCATCCACACGAAGA 59.254 43.478 0.00 0.00 39.73 2.87
2735 4454 3.498018 TGTGAATGTTCATCCACACGAAG 59.502 43.478 0.94 0.00 39.73 3.79
2736 4455 3.471680 TGTGAATGTTCATCCACACGAA 58.528 40.909 0.94 0.00 39.73 3.85
2737 4456 3.118905 TGTGAATGTTCATCCACACGA 57.881 42.857 0.94 0.00 39.73 4.35
2738 4457 4.083377 TGAATGTGAATGTTCATCCACACG 60.083 41.667 6.98 0.00 41.56 4.49
2739 4458 5.375417 TGAATGTGAATGTTCATCCACAC 57.625 39.130 6.98 8.28 41.56 3.82
2740 4459 5.562501 CGTTGAATGTGAATGTTCATCCACA 60.563 40.000 7.25 7.25 42.71 4.17
2741 4460 4.853196 CGTTGAATGTGAATGTTCATCCAC 59.147 41.667 0.00 0.00 39.73 4.02
2742 4461 4.082841 CCGTTGAATGTGAATGTTCATCCA 60.083 41.667 0.00 0.00 39.73 3.41
2743 4462 4.155826 TCCGTTGAATGTGAATGTTCATCC 59.844 41.667 0.00 0.00 39.73 3.51
2744 4463 5.295431 TCCGTTGAATGTGAATGTTCATC 57.705 39.130 0.00 0.00 39.73 2.92
2745 4464 5.241506 ACTTCCGTTGAATGTGAATGTTCAT 59.758 36.000 0.00 0.00 39.73 2.57
2746 4465 4.578516 ACTTCCGTTGAATGTGAATGTTCA 59.421 37.500 0.00 0.00 34.20 3.18
2747 4466 4.911610 CACTTCCGTTGAATGTGAATGTTC 59.088 41.667 0.00 0.00 34.39 3.18
2748 4467 4.578516 TCACTTCCGTTGAATGTGAATGTT 59.421 37.500 0.00 0.00 36.54 2.71
2749 4468 4.133820 TCACTTCCGTTGAATGTGAATGT 58.866 39.130 0.00 0.00 36.54 2.71
2750 4469 4.747540 TCACTTCCGTTGAATGTGAATG 57.252 40.909 0.00 0.00 36.54 2.67
2751 4470 5.248640 AGATCACTTCCGTTGAATGTGAAT 58.751 37.500 0.00 0.00 39.64 2.57
2752 4471 4.641396 AGATCACTTCCGTTGAATGTGAA 58.359 39.130 0.00 0.00 39.64 3.18
2753 4472 4.271696 AGATCACTTCCGTTGAATGTGA 57.728 40.909 0.00 0.00 40.06 3.58
2754 4473 6.668541 AATAGATCACTTCCGTTGAATGTG 57.331 37.500 0.00 0.00 34.08 3.21
2755 4474 6.094048 CCAAATAGATCACTTCCGTTGAATGT 59.906 38.462 0.00 0.00 0.00 2.71
2756 4475 6.316140 TCCAAATAGATCACTTCCGTTGAATG 59.684 38.462 0.00 0.00 0.00 2.67
2757 4476 6.414732 TCCAAATAGATCACTTCCGTTGAAT 58.585 36.000 0.00 0.00 0.00 2.57
2758 4477 5.800296 TCCAAATAGATCACTTCCGTTGAA 58.200 37.500 0.00 0.00 0.00 2.69
2759 4478 5.414789 TCCAAATAGATCACTTCCGTTGA 57.585 39.130 0.00 0.00 0.00 3.18
2760 4479 7.969536 ATATCCAAATAGATCACTTCCGTTG 57.030 36.000 0.00 0.00 0.00 4.10
2761 4480 8.980481 AAATATCCAAATAGATCACTTCCGTT 57.020 30.769 0.00 0.00 0.00 4.44
2762 4481 8.980481 AAAATATCCAAATAGATCACTTCCGT 57.020 30.769 0.00 0.00 0.00 4.69
2803 4522 8.520351 GGAGCCAAAACACTATTTTAGTACAAT 58.480 33.333 0.00 0.00 37.23 2.71
2804 4523 7.040271 GGGAGCCAAAACACTATTTTAGTACAA 60.040 37.037 0.00 0.00 37.23 2.41
2805 4524 6.431852 GGGAGCCAAAACACTATTTTAGTACA 59.568 38.462 0.00 0.00 37.23 2.90
2806 4525 6.127814 GGGGAGCCAAAACACTATTTTAGTAC 60.128 42.308 0.00 0.00 37.23 2.73
2807 4526 5.947566 GGGGAGCCAAAACACTATTTTAGTA 59.052 40.000 0.00 0.00 37.23 1.82
2808 4527 4.770531 GGGGAGCCAAAACACTATTTTAGT 59.229 41.667 0.00 0.00 40.28 2.24
2809 4528 4.770010 TGGGGAGCCAAAACACTATTTTAG 59.230 41.667 0.00 0.00 0.00 1.85
2810 4529 4.525100 GTGGGGAGCCAAAACACTATTTTA 59.475 41.667 0.00 0.00 0.00 1.52
2811 4530 3.323691 GTGGGGAGCCAAAACACTATTTT 59.676 43.478 0.00 0.00 0.00 1.82
2812 4531 2.897326 GTGGGGAGCCAAAACACTATTT 59.103 45.455 0.00 0.00 0.00 1.40
2813 4532 2.525368 GTGGGGAGCCAAAACACTATT 58.475 47.619 0.00 0.00 0.00 1.73
2814 4533 1.613255 CGTGGGGAGCCAAAACACTAT 60.613 52.381 0.00 0.00 0.00 2.12
2815 4534 0.250553 CGTGGGGAGCCAAAACACTA 60.251 55.000 0.00 0.00 0.00 2.74
2816 4535 1.528309 CGTGGGGAGCCAAAACACT 60.528 57.895 0.00 0.00 0.00 3.55
2817 4536 1.388837 AACGTGGGGAGCCAAAACAC 61.389 55.000 0.00 0.00 0.00 3.32
2818 4537 1.076632 AACGTGGGGAGCCAAAACA 60.077 52.632 0.00 0.00 0.00 2.83
2819 4538 1.658114 GAACGTGGGGAGCCAAAAC 59.342 57.895 0.00 0.00 0.00 2.43
2820 4539 1.529713 GGAACGTGGGGAGCCAAAA 60.530 57.895 0.00 0.00 0.00 2.44
2821 4540 2.002018 AAGGAACGTGGGGAGCCAAA 62.002 55.000 0.00 0.00 0.00 3.28
2822 4541 2.457323 AAGGAACGTGGGGAGCCAA 61.457 57.895 0.00 0.00 0.00 4.52
2823 4542 2.852075 AAGGAACGTGGGGAGCCA 60.852 61.111 0.00 0.00 0.00 4.75
2824 4543 2.359975 CAAGGAACGTGGGGAGCC 60.360 66.667 0.00 0.00 33.25 4.70
2825 4544 0.822121 AAACAAGGAACGTGGGGAGC 60.822 55.000 0.00 0.00 43.51 4.70
2826 4545 2.554370 TAAACAAGGAACGTGGGGAG 57.446 50.000 0.00 0.00 43.51 4.30
2827 4546 3.294038 TTTAAACAAGGAACGTGGGGA 57.706 42.857 0.00 0.00 43.51 4.81
2828 4547 3.130693 TGTTTTAAACAAGGAACGTGGGG 59.869 43.478 8.17 0.00 43.51 4.96
2829 4548 4.373348 TGTTTTAAACAAGGAACGTGGG 57.627 40.909 8.17 0.00 43.51 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.