Multiple sequence alignment - TraesCS2A01G266200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G266200 chr2A 100.000 4353 0 0 1 4353 423209708 423205356 0.000000e+00 8039.0
1 TraesCS2A01G266200 chr2A 81.633 245 35 10 2398 2636 10505020 10504780 1.240000e-45 195.0
2 TraesCS2A01G266200 chr2A 78.261 207 34 8 10 208 699800590 699800793 5.910000e-24 122.0
3 TraesCS2A01G266200 chr2A 77.169 219 37 9 5 218 16747213 16747423 9.890000e-22 115.0
4 TraesCS2A01G266200 chr2D 94.637 1473 69 7 2377 3847 313635515 313636979 0.000000e+00 2274.0
5 TraesCS2A01G266200 chr2D 93.662 710 32 6 887 1586 313633940 313634646 0.000000e+00 1050.0
6 TraesCS2A01G266200 chr2D 90.398 729 51 9 1578 2296 313634798 313635517 0.000000e+00 941.0
7 TraesCS2A01G266200 chr2D 81.505 465 44 21 3843 4280 313645254 313645703 1.160000e-90 344.0
8 TraesCS2A01G266200 chr2D 79.755 489 69 14 159 631 103170003 103170477 1.170000e-85 327.0
9 TraesCS2A01G266200 chr2D 96.552 87 3 0 2293 2379 117843039 117843125 1.260000e-30 145.0
10 TraesCS2A01G266200 chr2D 91.429 70 3 3 2174 2241 638137132 638137200 4.640000e-15 93.5
11 TraesCS2A01G266200 chr2B 93.401 1076 59 8 2634 3705 381297174 381298241 0.000000e+00 1583.0
12 TraesCS2A01G266200 chr2B 89.341 713 52 12 1461 2157 381296382 381297086 0.000000e+00 874.0
13 TraesCS2A01G266200 chr2B 95.039 383 18 1 887 1269 381295456 381295837 6.230000e-168 601.0
14 TraesCS2A01G266200 chr2B 78.022 637 98 28 5 630 447866367 447866972 3.200000e-96 363.0
15 TraesCS2A01G266200 chr2B 95.556 225 9 1 646 869 381295244 381295468 4.140000e-95 359.0
16 TraesCS2A01G266200 chr2B 77.344 640 89 32 5 630 447905825 447906422 1.170000e-85 327.0
17 TraesCS2A01G266200 chr2B 90.741 162 8 2 4163 4317 381299055 381299216 4.410000e-50 209.0
18 TraesCS2A01G266200 chr2B 96.667 120 4 0 1309 1428 381295836 381295955 2.650000e-47 200.0
19 TraesCS2A01G266200 chr2B 89.796 147 4 2 4030 4176 381298282 381298417 1.240000e-40 178.0
20 TraesCS2A01G266200 chr2B 94.565 92 2 2 2291 2379 22317051 22316960 5.870000e-29 139.0
21 TraesCS2A01G266200 chr2B 77.500 160 30 6 170 323 23777142 23777301 1.670000e-14 91.6
22 TraesCS2A01G266200 chr2B 100.000 33 0 0 3657 3689 381298276 381298244 1.310000e-05 62.1
23 TraesCS2A01G266200 chr4B 78.704 648 102 25 8 630 91187981 91187345 2.440000e-107 399.0
24 TraesCS2A01G266200 chr4B 86.250 240 31 2 2398 2635 237949692 237949931 4.320000e-65 259.0
25 TraesCS2A01G266200 chr4B 89.041 73 8 0 2169 2241 61303653 61303581 1.670000e-14 91.6
26 TraesCS2A01G266200 chr6D 79.430 491 68 21 159 630 388970134 388970610 2.530000e-82 316.0
27 TraesCS2A01G266200 chr6D 93.548 93 5 1 2293 2385 1551884 1551793 2.110000e-28 137.0
28 TraesCS2A01G266200 chr1D 84.026 313 40 6 327 632 298072170 298072479 4.260000e-75 292.0
29 TraesCS2A01G266200 chr1D 85.714 231 29 4 2409 2636 421069430 421069201 1.560000e-59 241.0
30 TraesCS2A01G266200 chr1D 93.478 92 5 1 2294 2384 318382794 318382885 7.590000e-28 135.0
31 TraesCS2A01G266200 chr5D 83.810 315 41 9 327 633 519097408 519097096 1.530000e-74 291.0
32 TraesCS2A01G266200 chr5D 73.063 568 88 30 5 529 82178634 82179179 1.630000e-29 141.0
33 TraesCS2A01G266200 chr5D 91.000 100 7 2 2281 2379 446918268 446918170 2.730000e-27 134.0
34 TraesCS2A01G266200 chr5D 77.778 207 35 7 10 208 465705185 465704982 2.750000e-22 117.0
35 TraesCS2A01G266200 chr5D 90.323 62 4 2 2185 2244 529450256 529450195 3.610000e-11 80.5
36 TraesCS2A01G266200 chr3D 81.301 369 55 12 271 630 102650269 102650632 1.980000e-73 287.0
37 TraesCS2A01G266200 chr7B 77.366 486 88 19 159 628 742475809 742476288 7.180000e-68 268.0
38 TraesCS2A01G266200 chr7B 79.808 208 32 8 13 214 720302403 720302606 4.540000e-30 143.0
39 TraesCS2A01G266200 chr7B 85.714 84 11 1 2168 2250 216937660 216937577 2.160000e-13 87.9
40 TraesCS2A01G266200 chr1B 84.232 241 36 2 2398 2636 334657309 334657549 2.620000e-57 233.0
41 TraesCS2A01G266200 chr1B 85.227 88 9 3 2161 2244 560210711 560210798 2.160000e-13 87.9
42 TraesCS2A01G266200 chr3B 83.333 246 32 5 2398 2635 648901143 648901387 7.330000e-53 219.0
43 TraesCS2A01G266200 chr3B 89.041 73 7 1 2170 2241 829204560 829204632 6.000000e-14 89.8
44 TraesCS2A01G266200 chr5B 84.080 201 30 2 2430 2628 701484290 701484490 4.440000e-45 193.0
45 TraesCS2A01G266200 chr5B 81.624 234 36 7 2407 2635 347303984 347303753 2.070000e-43 187.0
46 TraesCS2A01G266200 chr5B 92.473 93 7 0 2293 2385 325965703 325965795 2.730000e-27 134.0
47 TraesCS2A01G266200 chr5B 87.500 80 9 1 2167 2245 45388600 45388521 1.670000e-14 91.6
48 TraesCS2A01G266200 chr7D 80.876 251 33 12 5 245 446421338 446421583 2.670000e-42 183.0
49 TraesCS2A01G266200 chr7D 81.768 181 21 9 8 183 183797602 183797429 1.630000e-29 141.0
50 TraesCS2A01G266200 chr7D 94.444 90 5 0 2290 2379 632404684 632404595 5.870000e-29 139.0
51 TraesCS2A01G266200 chr4D 80.738 244 37 10 2398 2636 417623139 417622901 9.620000e-42 182.0
52 TraesCS2A01G266200 chr1A 80.392 204 33 6 10 208 139557398 139557599 9.750000e-32 148.0
53 TraesCS2A01G266200 chr7A 95.506 89 4 0 2290 2378 686371311 686371399 4.540000e-30 143.0
54 TraesCS2A01G266200 chr4A 95.455 88 4 0 2294 2381 9380759 9380672 1.630000e-29 141.0
55 TraesCS2A01G266200 chr4A 77.876 226 34 11 8 221 589114404 589114625 4.570000e-25 126.0
56 TraesCS2A01G266200 chr3A 88.506 87 9 1 2155 2240 616249594 616249680 2.140000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G266200 chr2A 423205356 423209708 4352 True 8039.000000 8039 100.000000 1 4353 1 chr2A.!!$R2 4352
1 TraesCS2A01G266200 chr2D 313633940 313636979 3039 False 1421.666667 2274 92.899000 887 3847 3 chr2D.!!$F5 2960
2 TraesCS2A01G266200 chr2B 381295244 381299216 3972 False 572.000000 1583 92.934429 646 4317 7 chr2B.!!$F4 3671
3 TraesCS2A01G266200 chr2B 447866367 447866972 605 False 363.000000 363 78.022000 5 630 1 chr2B.!!$F2 625
4 TraesCS2A01G266200 chr2B 447905825 447906422 597 False 327.000000 327 77.344000 5 630 1 chr2B.!!$F3 625
5 TraesCS2A01G266200 chr4B 91187345 91187981 636 True 399.000000 399 78.704000 8 630 1 chr4B.!!$R2 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 492 0.109458 CGACGTGAGGAATCCAACGA 60.109 55.0 26.78 0.00 37.83 3.85 F
1020 1068 0.266152 TGGAAGGGGAGGAGGAGATC 59.734 60.0 0.00 0.00 0.00 2.75 F
1292 1381 0.036577 CTCTGCTAGCCTGCTGTTGT 60.037 55.0 13.29 0.00 34.27 3.32 F
1297 1386 0.250234 CTAGCCTGCTGTTGTGCCTA 59.750 55.0 0.97 0.00 0.00 3.93 F
2429 3109 0.259356 CCGGTTTATTGGGCCCCTAA 59.741 55.0 22.27 14.62 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1273 1362 0.036577 ACAACAGCAGGCTAGCAGAG 60.037 55.000 18.24 6.49 36.85 3.35 R
2981 3663 0.249911 GTCCTGTTCGTCCTTGTGCT 60.250 55.000 0.00 0.00 0.00 4.40 R
2996 3678 1.073923 AGGGATTCTGTTTTGCGTCCT 59.926 47.619 0.00 0.00 0.00 3.85 R
3017 3699 1.742831 TGAATTACGGCTTGATGTGCC 59.257 47.619 0.00 0.00 46.42 5.01 R
4016 4704 0.100325 CAAAACACGCACTGGCAAGA 59.900 50.000 0.00 0.00 41.24 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 0.672401 GTCGTGCCTCCCGAAAATGA 60.672 55.000 0.00 0.00 35.89 2.57
108 114 1.000274 GAGGCACATTTTTGCTTCCGT 60.000 47.619 0.00 0.00 41.54 4.69
139 145 1.089920 CCATGCCTCTTGGAAACGAG 58.910 55.000 0.00 0.00 43.82 4.18
188 200 0.668535 GAGAGGCACCGTTTTGCTTT 59.331 50.000 1.50 0.00 42.56 3.51
190 202 0.383949 GAGGCACCGTTTTGCTTTCA 59.616 50.000 1.50 0.00 42.56 2.69
220 237 2.119671 GGTTGTGCCTTTCAGAAACG 57.880 50.000 0.00 0.00 29.12 3.60
270 309 1.761784 TGACAGGCATGGTTTTGCTTT 59.238 42.857 2.31 0.00 42.38 3.51
272 311 2.036346 GACAGGCATGGTTTTGCTTTCT 59.964 45.455 2.31 0.00 42.38 2.52
280 319 2.158813 TGGTTTTGCTTTCTCGAGAGGT 60.159 45.455 15.94 0.00 0.00 3.85
285 324 1.093159 GCTTTCTCGAGAGGTACGGA 58.907 55.000 15.94 0.00 0.00 4.69
287 326 2.099427 GCTTTCTCGAGAGGTACGGATT 59.901 50.000 15.94 0.00 0.00 3.01
288 327 3.429135 GCTTTCTCGAGAGGTACGGATTT 60.429 47.826 15.94 0.00 0.00 2.17
289 328 3.777465 TTCTCGAGAGGTACGGATTTG 57.223 47.619 15.94 0.00 0.00 2.32
290 329 1.404391 TCTCGAGAGGTACGGATTTGC 59.596 52.381 12.08 0.00 0.00 3.68
291 330 1.405821 CTCGAGAGGTACGGATTTGCT 59.594 52.381 6.58 0.00 0.00 3.91
292 331 1.822990 TCGAGAGGTACGGATTTGCTT 59.177 47.619 0.00 0.00 0.00 3.91
293 332 2.159282 TCGAGAGGTACGGATTTGCTTC 60.159 50.000 0.00 0.00 0.00 3.86
294 333 2.194271 GAGAGGTACGGATTTGCTTCG 58.806 52.381 0.00 0.00 0.00 3.79
295 334 1.549170 AGAGGTACGGATTTGCTTCGT 59.451 47.619 0.00 0.00 40.40 3.85
296 335 1.659098 GAGGTACGGATTTGCTTCGTG 59.341 52.381 0.00 0.00 38.19 4.35
297 336 1.274167 AGGTACGGATTTGCTTCGTGA 59.726 47.619 0.00 0.00 38.19 4.35
298 337 1.659098 GGTACGGATTTGCTTCGTGAG 59.341 52.381 0.00 0.00 38.19 3.51
299 338 2.602878 GTACGGATTTGCTTCGTGAGA 58.397 47.619 0.00 0.00 38.19 3.27
300 339 2.386661 ACGGATTTGCTTCGTGAGAT 57.613 45.000 0.00 0.00 41.60 2.75
301 340 2.002586 ACGGATTTGCTTCGTGAGATG 58.997 47.619 0.00 0.00 41.60 2.90
315 354 0.745845 GAGATGCATGGTCGTGCCTT 60.746 55.000 2.46 0.81 44.43 4.35
318 357 0.968405 ATGCATGGTCGTGCCTTTTT 59.032 45.000 12.00 0.00 44.43 1.94
324 363 1.202200 TGGTCGTGCCTTTTTGAAACG 60.202 47.619 0.00 0.00 38.35 3.60
325 364 1.472990 GTCGTGCCTTTTTGAAACGG 58.527 50.000 0.00 0.00 35.08 4.44
373 412 0.641783 CGGTTCGGTTTTATCGTCCG 59.358 55.000 0.00 0.00 44.76 4.79
411 452 5.838531 TTTCGTCAAAACCTACCAACATT 57.161 34.783 0.00 0.00 0.00 2.71
413 454 4.200874 TCGTCAAAACCTACCAACATTGT 58.799 39.130 0.00 0.00 0.00 2.71
416 457 6.487331 TCGTCAAAACCTACCAACATTGTATT 59.513 34.615 0.00 0.00 0.00 1.89
451 492 0.109458 CGACGTGAGGAATCCAACGA 60.109 55.000 26.78 0.00 37.83 3.85
471 512 6.978343 ACGATGAAAATGGTTCGAGATTTA 57.022 33.333 0.00 0.00 35.64 1.40
479 520 2.029739 TGGTTCGAGATTTAGACGCACA 60.030 45.455 0.00 0.00 0.00 4.57
480 521 2.344741 GGTTCGAGATTTAGACGCACAC 59.655 50.000 0.00 0.00 0.00 3.82
542 588 5.432885 AAAGGAAAACTCACATGTTACGG 57.567 39.130 0.00 0.00 0.00 4.02
578 625 2.106683 GCGCGCCCTTGTCATAACT 61.107 57.895 23.24 0.00 0.00 2.24
589 636 5.869753 CTTGTCATAACTTGAGAAGGTGG 57.130 43.478 4.96 0.00 46.74 4.61
597 644 2.982488 ACTTGAGAAGGTGGGAGTGATT 59.018 45.455 0.00 0.00 0.00 2.57
602 649 4.141274 TGAGAAGGTGGGAGTGATTTTTGA 60.141 41.667 0.00 0.00 0.00 2.69
606 653 4.803452 AGGTGGGAGTGATTTTTGAAAGA 58.197 39.130 0.00 0.00 0.00 2.52
608 655 5.660864 AGGTGGGAGTGATTTTTGAAAGAAA 59.339 36.000 0.00 0.00 0.00 2.52
632 679 9.901172 AAATACTCCTTAATTAGTGATTTCGGT 57.099 29.630 1.17 0.00 0.00 4.69
633 680 9.901172 AATACTCCTTAATTAGTGATTTCGGTT 57.099 29.630 1.17 0.00 0.00 4.44
634 681 7.845066 ACTCCTTAATTAGTGATTTCGGTTC 57.155 36.000 0.00 0.00 0.00 3.62
635 682 6.822170 ACTCCTTAATTAGTGATTTCGGTTCC 59.178 38.462 0.00 0.00 0.00 3.62
636 683 6.954232 TCCTTAATTAGTGATTTCGGTTCCT 58.046 36.000 0.00 0.00 0.00 3.36
637 684 7.399634 TCCTTAATTAGTGATTTCGGTTCCTT 58.600 34.615 0.00 0.00 0.00 3.36
638 685 7.335924 TCCTTAATTAGTGATTTCGGTTCCTTG 59.664 37.037 0.00 0.00 0.00 3.61
639 686 7.335924 CCTTAATTAGTGATTTCGGTTCCTTGA 59.664 37.037 0.00 0.00 0.00 3.02
640 687 8.624367 TTAATTAGTGATTTCGGTTCCTTGAA 57.376 30.769 0.00 0.00 0.00 2.69
641 688 7.519032 AATTAGTGATTTCGGTTCCTTGAAA 57.481 32.000 0.00 0.00 38.35 2.69
642 689 6.945938 TTAGTGATTTCGGTTCCTTGAAAA 57.054 33.333 0.00 0.00 37.60 2.29
643 690 5.845391 AGTGATTTCGGTTCCTTGAAAAA 57.155 34.783 0.00 0.00 37.60 1.94
770 818 2.036256 GGCCACCCAGTTGAGCAT 59.964 61.111 0.00 0.00 0.00 3.79
784 832 1.106285 GAGCATAACAAGGCCCAAGG 58.894 55.000 0.00 0.00 0.00 3.61
844 892 1.102222 GGATACGCCTCCGTCAGTCT 61.102 60.000 0.00 0.00 46.39 3.24
851 899 0.391927 CCTCCGTCAGTCTCTCTCGT 60.392 60.000 0.00 0.00 0.00 4.18
856 904 1.740297 GTCAGTCTCTCTCGTAGCCA 58.260 55.000 0.00 0.00 0.00 4.75
857 905 1.399089 GTCAGTCTCTCTCGTAGCCAC 59.601 57.143 0.00 0.00 0.00 5.01
869 917 2.150397 GTAGCCACGAACACAAGACT 57.850 50.000 0.00 0.00 0.00 3.24
870 918 2.059541 GTAGCCACGAACACAAGACTC 58.940 52.381 0.00 0.00 0.00 3.36
871 919 0.753262 AGCCACGAACACAAGACTCT 59.247 50.000 0.00 0.00 0.00 3.24
872 920 1.139058 AGCCACGAACACAAGACTCTT 59.861 47.619 0.00 0.00 0.00 2.85
873 921 1.261619 GCCACGAACACAAGACTCTTG 59.738 52.381 16.01 16.01 0.00 3.02
874 922 2.550978 CCACGAACACAAGACTCTTGT 58.449 47.619 17.29 17.29 0.00 3.16
875 923 2.540101 CCACGAACACAAGACTCTTGTC 59.460 50.000 19.70 9.58 43.22 3.18
1020 1068 0.266152 TGGAAGGGGAGGAGGAGATC 59.734 60.000 0.00 0.00 0.00 2.75
1248 1296 3.202151 TCCTATTCCTGGTTGGTCATTCC 59.798 47.826 0.00 0.00 37.07 3.01
1289 1378 2.583520 GCTCTGCTAGCCTGCTGT 59.416 61.111 13.29 0.00 46.25 4.40
1290 1379 1.078567 GCTCTGCTAGCCTGCTGTT 60.079 57.895 13.29 0.00 46.25 3.16
1291 1380 1.367599 GCTCTGCTAGCCTGCTGTTG 61.368 60.000 13.29 0.00 46.25 3.33
1292 1381 0.036577 CTCTGCTAGCCTGCTGTTGT 60.037 55.000 13.29 0.00 34.27 3.32
1293 1382 0.321034 TCTGCTAGCCTGCTGTTGTG 60.321 55.000 13.29 0.00 34.27 3.33
1294 1383 1.919956 CTGCTAGCCTGCTGTTGTGC 61.920 60.000 13.29 0.00 0.00 4.57
1295 1384 2.694760 GCTAGCCTGCTGTTGTGCC 61.695 63.158 2.29 0.00 0.00 5.01
1296 1385 1.002868 CTAGCCTGCTGTTGTGCCT 60.003 57.895 0.97 0.00 0.00 4.75
1297 1386 0.250234 CTAGCCTGCTGTTGTGCCTA 59.750 55.000 0.97 0.00 0.00 3.93
1298 1387 0.911769 TAGCCTGCTGTTGTGCCTAT 59.088 50.000 0.97 0.00 0.00 2.57
1299 1388 0.911769 AGCCTGCTGTTGTGCCTATA 59.088 50.000 0.00 0.00 0.00 1.31
1300 1389 1.134280 AGCCTGCTGTTGTGCCTATAG 60.134 52.381 0.00 0.00 0.00 1.31
1301 1390 1.407437 GCCTGCTGTTGTGCCTATAGT 60.407 52.381 0.00 0.00 0.00 2.12
1302 1391 2.941415 GCCTGCTGTTGTGCCTATAGTT 60.941 50.000 0.00 0.00 0.00 2.24
1303 1392 3.681594 GCCTGCTGTTGTGCCTATAGTTA 60.682 47.826 0.00 0.00 0.00 2.24
1304 1393 4.708177 CCTGCTGTTGTGCCTATAGTTAT 58.292 43.478 0.00 0.00 0.00 1.89
1305 1394 5.126067 CCTGCTGTTGTGCCTATAGTTATT 58.874 41.667 0.00 0.00 0.00 1.40
1306 1395 5.008019 CCTGCTGTTGTGCCTATAGTTATTG 59.992 44.000 0.00 0.00 0.00 1.90
1307 1396 5.496556 TGCTGTTGTGCCTATAGTTATTGT 58.503 37.500 0.00 0.00 0.00 2.71
1308 1397 5.943416 TGCTGTTGTGCCTATAGTTATTGTT 59.057 36.000 0.00 0.00 0.00 2.83
1309 1398 6.432783 TGCTGTTGTGCCTATAGTTATTGTTT 59.567 34.615 0.00 0.00 0.00 2.83
1335 1424 2.101415 CCACGAGCTGGAGTTGATATGA 59.899 50.000 1.44 0.00 43.95 2.15
1413 1502 5.934935 TTTTCGTGAGGAACCAAATCTAC 57.065 39.130 0.00 0.00 33.42 2.59
1555 2059 5.128827 GGGTAGTGTAAGATGGATTCTGTGA 59.871 44.000 0.00 0.00 33.93 3.58
1616 2282 8.606602 GGGTAAGGTACAGATTGTATTAAAACG 58.393 37.037 0.00 0.00 35.05 3.60
1646 2312 7.342769 TGCGACAAGAAATAGGTAGAGATTA 57.657 36.000 0.00 0.00 0.00 1.75
1670 2337 7.760131 ACTGAGTGAACACAAATGAAAAATG 57.240 32.000 7.68 0.00 0.00 2.32
1728 2395 9.732130 AGAGAGATAATTTTCACTTTGCTTACT 57.268 29.630 0.00 0.00 0.00 2.24
1729 2396 9.766277 GAGAGATAATTTTCACTTTGCTTACTG 57.234 33.333 0.00 0.00 0.00 2.74
1730 2397 9.289782 AGAGATAATTTTCACTTTGCTTACTGT 57.710 29.630 0.00 0.00 0.00 3.55
1777 2444 2.009051 CACATCTGCGCATTCCTTGTA 58.991 47.619 12.24 0.00 0.00 2.41
1803 2471 1.467734 AGCTCGCATGCTTTTCTTCTG 59.532 47.619 17.13 0.00 40.93 3.02
1807 2475 4.293415 CTCGCATGCTTTTCTTCTGTTTT 58.707 39.130 17.13 0.00 0.00 2.43
1930 2608 4.590850 AGCACAAAAAGGAAGGTCATTC 57.409 40.909 0.00 0.00 37.17 2.67
1978 2656 4.479619 AGATGAAAATTTCTGCTTCGTGC 58.520 39.130 7.29 0.00 43.25 5.34
2001 2679 5.629435 GCTCACTAAACTGTAAAATGTTGCC 59.371 40.000 0.00 0.00 0.00 4.52
2013 2691 1.523758 ATGTTGCCGAGTTTCTGACC 58.476 50.000 0.00 0.00 0.00 4.02
2033 2711 8.946085 TCTGACCTTATTGTACAAAATGCTTAG 58.054 33.333 13.23 7.27 0.00 2.18
2159 2839 6.296026 ACACTTGCCTCAAGAAATTAGTACA 58.704 36.000 12.89 0.00 43.42 2.90
2164 2844 5.222048 TGCCTCAAGAAATTAGTACACCCTT 60.222 40.000 0.00 0.00 0.00 3.95
2165 2845 5.123979 GCCTCAAGAAATTAGTACACCCTTG 59.876 44.000 0.00 0.00 0.00 3.61
2180 2860 9.177927 AGTACACCCTTGGATCCATATTAATTA 57.822 33.333 17.06 0.00 0.00 1.40
2187 2867 8.677300 CCTTGGATCCATATTAATTATCGTTGG 58.323 37.037 17.06 0.00 0.00 3.77
2253 2933 5.321927 TGGAGGGAGTATTTTCTTTTGGAC 58.678 41.667 0.00 0.00 0.00 4.02
2255 2935 5.952347 GGAGGGAGTATTTTCTTTTGGACAT 59.048 40.000 0.00 0.00 0.00 3.06
2296 2976 6.708054 GCATATGGTGTTCTTAGCTTGATACT 59.292 38.462 4.56 0.00 0.00 2.12
2297 2977 7.095439 GCATATGGTGTTCTTAGCTTGATACTC 60.095 40.741 4.56 0.00 0.00 2.59
2298 2978 5.086104 TGGTGTTCTTAGCTTGATACTCC 57.914 43.478 0.00 4.27 0.00 3.85
2299 2979 4.081087 TGGTGTTCTTAGCTTGATACTCCC 60.081 45.833 0.00 0.00 0.00 4.30
2300 2980 4.162509 GGTGTTCTTAGCTTGATACTCCCT 59.837 45.833 0.00 0.00 0.00 4.20
2301 2981 5.353111 GTGTTCTTAGCTTGATACTCCCTC 58.647 45.833 0.00 0.00 0.00 4.30
2302 2982 4.406003 TGTTCTTAGCTTGATACTCCCTCC 59.594 45.833 0.00 0.00 0.00 4.30
2303 2983 3.223435 TCTTAGCTTGATACTCCCTCCG 58.777 50.000 0.00 0.00 0.00 4.63
2304 2984 2.750141 TAGCTTGATACTCCCTCCGT 57.250 50.000 0.00 0.00 0.00 4.69
2305 2985 2.750141 AGCTTGATACTCCCTCCGTA 57.250 50.000 0.00 0.00 0.00 4.02
2306 2986 3.028094 AGCTTGATACTCCCTCCGTAA 57.972 47.619 0.00 0.00 0.00 3.18
2307 2987 3.371965 AGCTTGATACTCCCTCCGTAAA 58.628 45.455 0.00 0.00 0.00 2.01
2308 2988 3.385111 AGCTTGATACTCCCTCCGTAAAG 59.615 47.826 0.00 0.00 0.00 1.85
2309 2989 3.383825 GCTTGATACTCCCTCCGTAAAGA 59.616 47.826 0.00 0.00 0.00 2.52
2310 2990 4.142004 GCTTGATACTCCCTCCGTAAAGAA 60.142 45.833 0.00 0.00 0.00 2.52
2311 2991 5.626116 GCTTGATACTCCCTCCGTAAAGAAA 60.626 44.000 0.00 0.00 0.00 2.52
2312 2992 6.555463 TTGATACTCCCTCCGTAAAGAAAT 57.445 37.500 0.00 0.00 0.00 2.17
2313 2993 7.664552 TTGATACTCCCTCCGTAAAGAAATA 57.335 36.000 0.00 0.00 0.00 1.40
2314 2994 7.850935 TGATACTCCCTCCGTAAAGAAATAT 57.149 36.000 0.00 0.00 0.00 1.28
2315 2995 8.945195 TGATACTCCCTCCGTAAAGAAATATA 57.055 34.615 0.00 0.00 0.00 0.86
2316 2996 9.370930 TGATACTCCCTCCGTAAAGAAATATAA 57.629 33.333 0.00 0.00 0.00 0.98
2317 2997 9.857957 GATACTCCCTCCGTAAAGAAATATAAG 57.142 37.037 0.00 0.00 0.00 1.73
2318 2998 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2319 2999 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2320 3000 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2321 3001 6.325545 TCCCTCCGTAAAGAAATATAAGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
2322 3002 7.016268 TCCCTCCGTAAAGAAATATAAGAGCAT 59.984 37.037 0.00 0.00 0.00 3.79
2323 3003 7.332182 CCCTCCGTAAAGAAATATAAGAGCATC 59.668 40.741 0.00 0.00 0.00 3.91
2341 3021 7.462109 GAGCATCTAGATCACAAAAGTAGTG 57.538 40.000 1.03 0.00 38.32 2.74
2351 3031 6.462073 TCACAAAAGTAGTGATCTAAACGC 57.538 37.500 0.00 0.00 40.80 4.84
2352 3032 6.220930 TCACAAAAGTAGTGATCTAAACGCT 58.779 36.000 0.00 0.00 40.80 5.07
2353 3033 6.365247 TCACAAAAGTAGTGATCTAAACGCTC 59.635 38.462 0.00 0.00 40.80 5.03
2354 3034 6.366332 CACAAAAGTAGTGATCTAAACGCTCT 59.634 38.462 0.00 0.00 39.30 4.09
2355 3035 6.929606 ACAAAAGTAGTGATCTAAACGCTCTT 59.070 34.615 0.00 0.00 0.00 2.85
2356 3036 8.086522 ACAAAAGTAGTGATCTAAACGCTCTTA 58.913 33.333 0.00 0.00 0.00 2.10
2357 3037 9.088512 CAAAAGTAGTGATCTAAACGCTCTTAT 57.911 33.333 0.00 0.00 0.00 1.73
2363 3043 8.819643 AGTGATCTAAACGCTCTTATATTTCC 57.180 34.615 0.00 0.00 0.00 3.13
2364 3044 8.643324 AGTGATCTAAACGCTCTTATATTTCCT 58.357 33.333 0.00 0.00 0.00 3.36
2365 3045 9.262358 GTGATCTAAACGCTCTTATATTTCCTT 57.738 33.333 0.00 0.00 0.00 3.36
2368 3048 8.792831 TCTAAACGCTCTTATATTTCCTTACG 57.207 34.615 0.00 0.00 0.00 3.18
2369 3049 6.839820 AAACGCTCTTATATTTCCTTACGG 57.160 37.500 0.00 0.00 0.00 4.02
2370 3050 5.779529 ACGCTCTTATATTTCCTTACGGA 57.220 39.130 0.00 0.00 37.60 4.69
2371 3051 5.770417 ACGCTCTTATATTTCCTTACGGAG 58.230 41.667 0.00 0.00 41.25 4.63
2373 3053 5.480205 GCTCTTATATTTCCTTACGGAGGG 58.520 45.833 7.19 0.00 46.31 4.30
2374 3054 5.245526 GCTCTTATATTTCCTTACGGAGGGA 59.754 44.000 0.00 0.00 46.31 4.20
2375 3055 6.572703 GCTCTTATATTTCCTTACGGAGGGAG 60.573 46.154 0.00 0.85 46.31 4.30
2399 3079 4.119136 ACCATTTTGTGCACAAAGCTTAC 58.881 39.130 35.79 1.61 45.34 2.34
2411 3091 3.259902 CAAAGCTTACTAACTCCGTCCC 58.740 50.000 0.00 0.00 0.00 4.46
2428 3108 1.647334 CCCGGTTTATTGGGCCCCTA 61.647 60.000 22.27 7.94 38.90 3.53
2429 3109 0.259356 CCGGTTTATTGGGCCCCTAA 59.741 55.000 22.27 14.62 0.00 2.69
2445 3125 4.200092 CCCCTAAGTATTTTGAGCCAGAC 58.800 47.826 0.00 0.00 0.00 3.51
2448 3128 5.946377 CCCTAAGTATTTTGAGCCAGACTTT 59.054 40.000 0.00 0.00 0.00 2.66
2457 3137 2.289882 TGAGCCAGACTTTGACCATCTG 60.290 50.000 0.00 0.00 39.70 2.90
2528 3208 9.541143 TTGGATTTGTATTTGAAAGAGTTTTCC 57.459 29.630 0.00 0.00 41.62 3.13
2535 3215 9.443323 TGTATTTGAAAGAGTTTTCCGATGATA 57.557 29.630 0.00 0.00 41.62 2.15
2611 3293 0.398522 CCCAAAATAAGAGGGGGCCC 60.399 60.000 15.76 15.76 38.98 5.80
2617 3299 3.612795 AATAAGAGGGGGCCCAATAAC 57.387 47.619 26.86 6.23 38.92 1.89
2722 3404 6.710744 ACCAACAAAGATATGAACGAGAAACT 59.289 34.615 0.00 0.00 0.00 2.66
2743 3425 0.755079 TCCTGAGCCAGATTGATCGG 59.245 55.000 4.00 0.00 32.44 4.18
2806 3488 2.575279 AGAGGACTGTGAAGCAATCCAT 59.425 45.455 0.00 0.00 45.39 3.41
2818 3500 1.035385 CAATCCATGAGGCTGCTGCA 61.035 55.000 17.89 0.88 41.91 4.41
2963 3645 1.564622 CACAACGGACTGCGTTCTG 59.435 57.895 5.23 0.91 0.00 3.02
2981 3663 6.276091 CGTTCTGATGGAATGACTGAAGATA 58.724 40.000 0.00 0.00 41.99 1.98
2996 3678 3.006430 TGAAGATAGCACAAGGACGAACA 59.994 43.478 0.00 0.00 0.00 3.18
3025 3707 3.888424 CAGAATCCCTGGCACATCA 57.112 52.632 0.00 0.00 39.23 3.07
3101 3783 2.045708 GTCATGATTGTGGGCGCCA 61.046 57.895 30.85 12.04 0.00 5.69
3307 3989 3.919554 AGGAAAGAGTTGAGATCCCCTTT 59.080 43.478 0.00 0.00 0.00 3.11
3358 4040 0.611714 ACGGCTTAGGTTGAATCCGT 59.388 50.000 0.00 0.00 44.27 4.69
3425 4109 2.813908 GTGTAGGAACTGCGGCCG 60.814 66.667 24.05 24.05 46.57 6.13
3469 4153 7.291411 TGCTCTCTACTTGGATATTTCCTAC 57.709 40.000 3.72 0.00 43.07 3.18
3500 4186 4.566488 CCTCTTTAGCCCTGAATGTTGAGT 60.566 45.833 0.00 0.00 0.00 3.41
3551 4237 2.341318 TGTCGTTCATCGTCGTCATT 57.659 45.000 0.00 0.00 40.80 2.57
3552 4238 3.474693 TGTCGTTCATCGTCGTCATTA 57.525 42.857 0.00 0.00 40.80 1.90
3553 4239 4.023739 TGTCGTTCATCGTCGTCATTAT 57.976 40.909 0.00 0.00 40.80 1.28
3561 4247 1.067974 TCGTCGTCATTATGGCGGATT 59.932 47.619 19.18 0.00 46.79 3.01
3565 4251 3.498397 GTCGTCATTATGGCGGATTCATT 59.502 43.478 19.18 0.00 46.79 2.57
3701 4389 0.735632 GAGCAGAGTCTGTTGCCGAG 60.736 60.000 21.06 0.00 41.17 4.63
3729 4417 7.029563 GTGAAGGCATTTCCTGTACTTTTATG 58.970 38.462 0.00 0.00 46.94 1.90
3738 4426 4.473196 TCCTGTACTTTTATGCCCTGATGA 59.527 41.667 0.00 0.00 0.00 2.92
3784 4472 2.244486 TGAGAAGAGAGATGGGCTGT 57.756 50.000 0.00 0.00 0.00 4.40
3785 4473 1.829849 TGAGAAGAGAGATGGGCTGTG 59.170 52.381 0.00 0.00 0.00 3.66
3827 4515 0.379669 GAATCTGAACCCAGCGCATG 59.620 55.000 11.47 4.88 40.20 4.06
3833 4521 2.378945 GAACCCAGCGCATGCATACG 62.379 60.000 19.57 15.08 46.23 3.06
3854 4542 4.830826 GGATACGGGGATGTTTCAATTC 57.169 45.455 0.00 0.00 0.00 2.17
3855 4543 4.204012 GGATACGGGGATGTTTCAATTCA 58.796 43.478 0.00 0.00 0.00 2.57
3856 4544 4.642885 GGATACGGGGATGTTTCAATTCAA 59.357 41.667 0.00 0.00 0.00 2.69
3857 4545 5.126384 GGATACGGGGATGTTTCAATTCAAA 59.874 40.000 0.00 0.00 0.00 2.69
3858 4546 4.519540 ACGGGGATGTTTCAATTCAAAG 57.480 40.909 0.00 0.00 0.00 2.77
3859 4547 3.253230 CGGGGATGTTTCAATTCAAAGC 58.747 45.455 0.00 0.00 0.00 3.51
3860 4548 3.305950 CGGGGATGTTTCAATTCAAAGCA 60.306 43.478 0.00 0.00 0.00 3.91
3861 4549 4.248058 GGGGATGTTTCAATTCAAAGCAG 58.752 43.478 0.00 0.00 0.00 4.24
3862 4550 4.248058 GGGATGTTTCAATTCAAAGCAGG 58.752 43.478 0.00 0.00 0.00 4.85
3863 4551 4.248058 GGATGTTTCAATTCAAAGCAGGG 58.752 43.478 0.00 0.00 0.00 4.45
3864 4552 4.021192 GGATGTTTCAATTCAAAGCAGGGA 60.021 41.667 0.00 0.00 0.00 4.20
3865 4553 5.511202 GGATGTTTCAATTCAAAGCAGGGAA 60.511 40.000 0.00 0.00 0.00 3.97
3866 4554 5.549742 TGTTTCAATTCAAAGCAGGGAAT 57.450 34.783 0.00 0.00 35.34 3.01
3867 4555 5.299148 TGTTTCAATTCAAAGCAGGGAATG 58.701 37.500 0.00 0.00 34.17 2.67
3880 4568 3.132925 CAGGGAATGCAGTTTTGTTTGG 58.867 45.455 0.00 0.00 0.00 3.28
3881 4569 2.771372 AGGGAATGCAGTTTTGTTTGGT 59.229 40.909 0.00 0.00 0.00 3.67
3882 4570 3.199727 AGGGAATGCAGTTTTGTTTGGTT 59.800 39.130 0.00 0.00 0.00 3.67
3883 4571 3.312146 GGGAATGCAGTTTTGTTTGGTTG 59.688 43.478 0.00 0.00 0.00 3.77
3884 4572 3.242706 GGAATGCAGTTTTGTTTGGTTGC 60.243 43.478 0.00 0.00 0.00 4.17
3885 4573 2.758736 TGCAGTTTTGTTTGGTTGCT 57.241 40.000 0.00 0.00 33.00 3.91
3886 4574 2.344950 TGCAGTTTTGTTTGGTTGCTG 58.655 42.857 0.00 0.00 33.00 4.41
3887 4575 2.289320 TGCAGTTTTGTTTGGTTGCTGT 60.289 40.909 0.00 0.00 33.00 4.40
3888 4576 3.056536 TGCAGTTTTGTTTGGTTGCTGTA 60.057 39.130 0.00 0.00 33.00 2.74
3889 4577 4.119136 GCAGTTTTGTTTGGTTGCTGTAT 58.881 39.130 0.00 0.00 0.00 2.29
3890 4578 4.025813 GCAGTTTTGTTTGGTTGCTGTATG 60.026 41.667 0.00 0.00 0.00 2.39
3891 4579 5.108517 CAGTTTTGTTTGGTTGCTGTATGT 58.891 37.500 0.00 0.00 0.00 2.29
3892 4580 6.269315 CAGTTTTGTTTGGTTGCTGTATGTA 58.731 36.000 0.00 0.00 0.00 2.29
3893 4581 6.922957 CAGTTTTGTTTGGTTGCTGTATGTAT 59.077 34.615 0.00 0.00 0.00 2.29
3894 4582 6.922957 AGTTTTGTTTGGTTGCTGTATGTATG 59.077 34.615 0.00 0.00 0.00 2.39
3895 4583 6.398234 TTTGTTTGGTTGCTGTATGTATGT 57.602 33.333 0.00 0.00 0.00 2.29
3896 4584 7.511959 TTTGTTTGGTTGCTGTATGTATGTA 57.488 32.000 0.00 0.00 0.00 2.29
3897 4585 7.695480 TTGTTTGGTTGCTGTATGTATGTAT 57.305 32.000 0.00 0.00 0.00 2.29
3898 4586 7.695480 TGTTTGGTTGCTGTATGTATGTATT 57.305 32.000 0.00 0.00 0.00 1.89
3899 4587 7.757526 TGTTTGGTTGCTGTATGTATGTATTC 58.242 34.615 0.00 0.00 0.00 1.75
3900 4588 6.935741 TTGGTTGCTGTATGTATGTATTCC 57.064 37.500 0.00 0.00 0.00 3.01
3901 4589 6.247229 TGGTTGCTGTATGTATGTATTCCT 57.753 37.500 0.00 0.00 0.00 3.36
3902 4590 6.054941 TGGTTGCTGTATGTATGTATTCCTG 58.945 40.000 0.00 0.00 0.00 3.86
3903 4591 6.055588 GGTTGCTGTATGTATGTATTCCTGT 58.944 40.000 0.00 0.00 0.00 4.00
3904 4592 6.542370 GGTTGCTGTATGTATGTATTCCTGTT 59.458 38.462 0.00 0.00 0.00 3.16
3905 4593 7.409697 GTTGCTGTATGTATGTATTCCTGTTG 58.590 38.462 0.00 0.00 0.00 3.33
3906 4594 5.527214 TGCTGTATGTATGTATTCCTGTTGC 59.473 40.000 0.00 0.00 0.00 4.17
3907 4595 5.333339 GCTGTATGTATGTATTCCTGTTGCG 60.333 44.000 0.00 0.00 0.00 4.85
3908 4596 5.053811 TGTATGTATGTATTCCTGTTGCGG 58.946 41.667 0.00 0.00 0.00 5.69
3909 4597 2.912771 TGTATGTATTCCTGTTGCGGG 58.087 47.619 0.00 0.00 0.00 6.13
3910 4598 2.237643 TGTATGTATTCCTGTTGCGGGT 59.762 45.455 0.00 0.00 0.00 5.28
3911 4599 3.451540 TGTATGTATTCCTGTTGCGGGTA 59.548 43.478 0.00 0.00 0.00 3.69
3912 4600 2.389962 TGTATTCCTGTTGCGGGTAC 57.610 50.000 0.00 0.00 0.00 3.34
3913 4601 1.903860 TGTATTCCTGTTGCGGGTACT 59.096 47.619 0.00 0.00 0.00 2.73
3914 4602 3.098377 TGTATTCCTGTTGCGGGTACTA 58.902 45.455 0.00 0.00 0.00 1.82
3915 4603 3.514706 TGTATTCCTGTTGCGGGTACTAA 59.485 43.478 0.00 0.00 0.00 2.24
3916 4604 3.926058 ATTCCTGTTGCGGGTACTAAT 57.074 42.857 0.00 0.00 0.00 1.73
3917 4605 3.706600 TTCCTGTTGCGGGTACTAATT 57.293 42.857 0.00 0.00 0.00 1.40
3918 4606 2.980568 TCCTGTTGCGGGTACTAATTG 58.019 47.619 0.00 0.00 0.00 2.32
3919 4607 2.014128 CCTGTTGCGGGTACTAATTGG 58.986 52.381 0.00 0.00 0.00 3.16
3920 4608 1.400494 CTGTTGCGGGTACTAATTGGC 59.600 52.381 0.00 0.00 0.00 4.52
3921 4609 1.271434 TGTTGCGGGTACTAATTGGCA 60.271 47.619 0.00 0.00 0.00 4.92
3922 4610 2.021457 GTTGCGGGTACTAATTGGCAT 58.979 47.619 0.00 0.00 0.00 4.40
3923 4611 3.207778 GTTGCGGGTACTAATTGGCATA 58.792 45.455 0.00 0.00 0.00 3.14
3924 4612 3.120321 TGCGGGTACTAATTGGCATAG 57.880 47.619 0.00 0.00 0.00 2.23
3925 4613 2.224426 TGCGGGTACTAATTGGCATAGG 60.224 50.000 0.00 0.00 0.00 2.57
3926 4614 2.423577 CGGGTACTAATTGGCATAGGC 58.576 52.381 0.00 0.00 40.13 3.93
3927 4615 2.038557 CGGGTACTAATTGGCATAGGCT 59.961 50.000 0.00 0.00 40.87 4.58
3928 4616 3.496160 CGGGTACTAATTGGCATAGGCTT 60.496 47.826 0.00 0.00 40.87 4.35
3929 4617 3.821033 GGGTACTAATTGGCATAGGCTTG 59.179 47.826 0.00 0.00 40.87 4.01
3930 4618 3.253432 GGTACTAATTGGCATAGGCTTGC 59.747 47.826 11.60 11.60 42.01 4.01
3937 4625 3.305709 GCATAGGCTTGCCGTATGA 57.694 52.632 22.85 5.83 42.23 2.15
3938 4626 1.593196 GCATAGGCTTGCCGTATGAA 58.407 50.000 22.85 4.66 42.23 2.57
3939 4627 2.154462 GCATAGGCTTGCCGTATGAAT 58.846 47.619 22.85 4.60 42.23 2.57
3940 4628 2.095567 GCATAGGCTTGCCGTATGAATG 60.096 50.000 22.85 14.85 42.23 2.67
3941 4629 3.402110 CATAGGCTTGCCGTATGAATGA 58.598 45.455 17.93 0.00 42.23 2.57
3942 4630 2.418368 AGGCTTGCCGTATGAATGAA 57.582 45.000 5.95 0.00 0.00 2.57
3943 4631 2.292267 AGGCTTGCCGTATGAATGAAG 58.708 47.619 5.95 0.00 0.00 3.02
3944 4632 1.334869 GGCTTGCCGTATGAATGAAGG 59.665 52.381 0.00 0.00 0.00 3.46
3945 4633 2.288666 GCTTGCCGTATGAATGAAGGA 58.711 47.619 0.00 0.00 0.00 3.36
3946 4634 2.682856 GCTTGCCGTATGAATGAAGGAA 59.317 45.455 0.00 0.00 0.00 3.36
3947 4635 3.242870 GCTTGCCGTATGAATGAAGGAAG 60.243 47.826 0.00 0.00 0.00 3.46
3948 4636 2.288666 TGCCGTATGAATGAAGGAAGC 58.711 47.619 0.00 0.00 0.00 3.86
3949 4637 2.288666 GCCGTATGAATGAAGGAAGCA 58.711 47.619 0.00 0.00 0.00 3.91
3950 4638 2.682856 GCCGTATGAATGAAGGAAGCAA 59.317 45.455 0.00 0.00 0.00 3.91
3951 4639 3.128589 GCCGTATGAATGAAGGAAGCAAA 59.871 43.478 0.00 0.00 0.00 3.68
3952 4640 4.731773 GCCGTATGAATGAAGGAAGCAAAG 60.732 45.833 0.00 0.00 0.00 2.77
3953 4641 4.635765 CCGTATGAATGAAGGAAGCAAAGA 59.364 41.667 0.00 0.00 0.00 2.52
3954 4642 5.123820 CCGTATGAATGAAGGAAGCAAAGAA 59.876 40.000 0.00 0.00 0.00 2.52
3955 4643 6.349280 CCGTATGAATGAAGGAAGCAAAGAAA 60.349 38.462 0.00 0.00 0.00 2.52
3956 4644 6.524586 CGTATGAATGAAGGAAGCAAAGAAAC 59.475 38.462 0.00 0.00 0.00 2.78
3957 4645 6.661304 ATGAATGAAGGAAGCAAAGAAACT 57.339 33.333 0.00 0.00 0.00 2.66
3958 4646 5.835257 TGAATGAAGGAAGCAAAGAAACTG 58.165 37.500 0.00 0.00 0.00 3.16
3959 4647 3.715628 TGAAGGAAGCAAAGAAACTGC 57.284 42.857 0.00 0.00 40.24 4.40
3960 4648 2.033299 TGAAGGAAGCAAAGAAACTGCG 59.967 45.455 0.00 0.00 44.75 5.18
3961 4649 1.680338 AGGAAGCAAAGAAACTGCGT 58.320 45.000 0.00 0.00 44.75 5.24
3962 4650 1.334869 AGGAAGCAAAGAAACTGCGTG 59.665 47.619 0.00 0.00 44.75 5.34
3963 4651 1.123655 GAAGCAAAGAAACTGCGTGC 58.876 50.000 0.00 0.00 44.75 5.34
3964 4652 0.592247 AAGCAAAGAAACTGCGTGCG 60.592 50.000 0.00 0.00 44.75 5.34
3965 4653 1.010125 GCAAAGAAACTGCGTGCGA 60.010 52.632 0.00 0.00 0.00 5.10
3966 4654 0.993746 GCAAAGAAACTGCGTGCGAG 60.994 55.000 0.00 0.00 0.00 5.03
3967 4655 0.993746 CAAAGAAACTGCGTGCGAGC 60.994 55.000 0.00 0.00 37.71 5.03
3968 4656 1.160329 AAAGAAACTGCGTGCGAGCT 61.160 50.000 4.86 0.00 38.13 4.09
3969 4657 0.319555 AAGAAACTGCGTGCGAGCTA 60.320 50.000 4.86 0.00 38.13 3.32
3970 4658 1.009389 AGAAACTGCGTGCGAGCTAC 61.009 55.000 4.86 0.00 38.13 3.58
3971 4659 1.006102 AAACTGCGTGCGAGCTACT 60.006 52.632 4.86 0.00 38.13 2.57
3972 4660 1.284982 AAACTGCGTGCGAGCTACTG 61.285 55.000 4.86 0.00 38.13 2.74
3973 4661 2.126307 CTGCGTGCGAGCTACTGT 60.126 61.111 4.86 0.00 38.13 3.55
3974 4662 1.136774 CTGCGTGCGAGCTACTGTA 59.863 57.895 4.86 0.00 38.13 2.74
3975 4663 1.134530 CTGCGTGCGAGCTACTGTAC 61.135 60.000 4.86 0.00 38.13 2.90
3976 4664 1.136984 GCGTGCGAGCTACTGTACT 59.863 57.895 0.00 0.00 0.00 2.73
3977 4665 1.134530 GCGTGCGAGCTACTGTACTG 61.135 60.000 0.00 0.00 0.00 2.74
3978 4666 0.168348 CGTGCGAGCTACTGTACTGT 59.832 55.000 10.46 10.46 0.00 3.55
3979 4667 1.395954 CGTGCGAGCTACTGTACTGTA 59.604 52.381 11.58 11.58 0.00 2.74
3980 4668 2.031807 CGTGCGAGCTACTGTACTGTAT 59.968 50.000 12.40 0.00 0.00 2.29
3981 4669 3.364062 GTGCGAGCTACTGTACTGTATG 58.636 50.000 12.40 8.44 0.00 2.39
3982 4670 3.064958 GTGCGAGCTACTGTACTGTATGA 59.935 47.826 12.40 0.00 0.00 2.15
3983 4671 3.692593 TGCGAGCTACTGTACTGTATGAA 59.307 43.478 12.40 0.00 0.00 2.57
3984 4672 4.201920 TGCGAGCTACTGTACTGTATGAAG 60.202 45.833 12.40 4.84 0.00 3.02
3985 4673 4.283678 CGAGCTACTGTACTGTATGAAGC 58.716 47.826 12.40 13.44 0.00 3.86
3986 4674 4.035792 CGAGCTACTGTACTGTATGAAGCT 59.964 45.833 21.13 21.13 0.00 3.74
3987 4675 5.255710 AGCTACTGTACTGTATGAAGCTG 57.744 43.478 20.62 7.55 0.00 4.24
3988 4676 3.799420 GCTACTGTACTGTATGAAGCTGC 59.201 47.826 12.40 7.47 0.00 5.25
3989 4677 2.881074 ACTGTACTGTATGAAGCTGCG 58.119 47.619 3.21 0.00 0.00 5.18
3990 4678 2.231478 ACTGTACTGTATGAAGCTGCGT 59.769 45.455 3.21 0.00 0.00 5.24
3991 4679 2.600420 CTGTACTGTATGAAGCTGCGTG 59.400 50.000 0.00 0.00 0.00 5.34
3992 4680 1.324736 GTACTGTATGAAGCTGCGTGC 59.675 52.381 0.00 0.00 43.29 5.34
3993 4681 0.320683 ACTGTATGAAGCTGCGTGCA 60.321 50.000 4.45 4.45 45.94 4.57
3994 4682 1.012086 CTGTATGAAGCTGCGTGCAT 58.988 50.000 5.01 1.52 45.94 3.96
3995 4683 0.728542 TGTATGAAGCTGCGTGCATG 59.271 50.000 0.00 0.09 45.94 4.06
3996 4684 0.590732 GTATGAAGCTGCGTGCATGC 60.591 55.000 24.20 24.20 45.94 4.06
3997 4685 1.025647 TATGAAGCTGCGTGCATGCA 61.026 50.000 30.58 30.58 45.94 3.96
3998 4686 1.663379 ATGAAGCTGCGTGCATGCAT 61.663 50.000 32.45 19.26 45.26 3.96
3999 4687 1.153901 GAAGCTGCGTGCATGCATT 60.154 52.632 32.45 24.55 45.26 3.56
4000 4688 0.734942 GAAGCTGCGTGCATGCATTT 60.735 50.000 32.45 27.09 45.26 2.32
4001 4689 0.320073 AAGCTGCGTGCATGCATTTT 60.320 45.000 32.45 24.66 45.26 1.82
4002 4690 1.011968 AGCTGCGTGCATGCATTTTG 61.012 50.000 32.45 21.66 45.26 2.44
4003 4691 1.418367 CTGCGTGCATGCATTTTGC 59.582 52.632 32.45 23.58 45.26 3.68
4014 4702 1.339711 GCATTTTGCACGTGATCACC 58.660 50.000 22.23 6.94 44.26 4.02
4015 4703 1.605500 CATTTTGCACGTGATCACCG 58.394 50.000 22.23 16.43 0.00 4.94
4016 4704 1.069296 CATTTTGCACGTGATCACCGT 60.069 47.619 22.23 17.05 39.52 4.83
4017 4705 0.584396 TTTTGCACGTGATCACCGTC 59.416 50.000 22.23 13.81 36.17 4.79
4018 4706 0.249699 TTTGCACGTGATCACCGTCT 60.250 50.000 22.23 0.00 36.17 4.18
4019 4707 0.249699 TTGCACGTGATCACCGTCTT 60.250 50.000 22.23 0.00 36.17 3.01
4020 4708 0.943835 TGCACGTGATCACCGTCTTG 60.944 55.000 22.23 10.25 36.17 3.02
4021 4709 1.781555 CACGTGATCACCGTCTTGC 59.218 57.895 20.03 0.00 36.17 4.01
4022 4710 1.374252 ACGTGATCACCGTCTTGCC 60.374 57.895 20.03 0.00 31.97 4.52
4023 4711 1.374125 CGTGATCACCGTCTTGCCA 60.374 57.895 20.03 0.00 0.00 4.92
4024 4712 1.354337 CGTGATCACCGTCTTGCCAG 61.354 60.000 20.03 0.00 0.00 4.85
4025 4713 0.320771 GTGATCACCGTCTTGCCAGT 60.321 55.000 15.31 0.00 0.00 4.00
4026 4714 0.320683 TGATCACCGTCTTGCCAGTG 60.321 55.000 0.00 0.00 0.00 3.66
4027 4715 1.639298 GATCACCGTCTTGCCAGTGC 61.639 60.000 0.00 0.00 38.26 4.40
4028 4716 3.716006 CACCGTCTTGCCAGTGCG 61.716 66.667 0.00 0.00 41.78 5.34
4061 4749 1.596260 CTGCCATGCGTCTGAATGTAG 59.404 52.381 0.00 0.00 27.85 2.74
4099 4787 8.344446 TGCACTGTCTCTAGTTAAGTTATACA 57.656 34.615 0.00 0.00 0.00 2.29
4100 4788 8.799367 TGCACTGTCTCTAGTTAAGTTATACAA 58.201 33.333 0.00 0.00 0.00 2.41
4101 4789 9.074443 GCACTGTCTCTAGTTAAGTTATACAAC 57.926 37.037 0.00 0.00 34.67 3.32
4121 4809 7.113658 ACAACTACATACCTGAAATCTCGAT 57.886 36.000 0.00 0.00 0.00 3.59
4122 4810 7.556844 ACAACTACATACCTGAAATCTCGATT 58.443 34.615 0.00 0.00 0.00 3.34
4143 4831 1.967319 TCACTTGGAGTTGCCTTGTC 58.033 50.000 0.00 0.00 37.63 3.18
4155 4843 1.005450 TGCCTTGTCCTTGGGATTACC 59.995 52.381 0.00 0.00 40.81 2.85
4176 5515 9.606631 ATTACCAATTTCAGTTAAAAAGTGCAA 57.393 25.926 0.00 0.00 32.06 4.08
4185 5524 8.220755 TCAGTTAAAAAGTGCAATCTACAAGT 57.779 30.769 0.00 0.00 0.00 3.16
4196 5535 8.097038 AGTGCAATCTACAAGTAGAAGAAATGA 58.903 33.333 13.39 0.00 44.44 2.57
4238 5577 0.250209 AGCAGGTGCAGAGTCTGTTG 60.250 55.000 21.06 14.60 45.16 3.33
4244 5590 3.114616 CAGAGTCTGTTGGCCGCG 61.115 66.667 12.28 0.00 0.00 6.46
4245 5591 3.616721 AGAGTCTGTTGGCCGCGT 61.617 61.111 4.92 0.00 0.00 6.01
4317 5663 5.862860 CGTTCCAAAGACTTTACTCCTCTAC 59.137 44.000 0.00 0.00 0.00 2.59
4318 5664 6.294620 CGTTCCAAAGACTTTACTCCTCTACT 60.295 42.308 0.00 0.00 0.00 2.57
4319 5665 7.094463 CGTTCCAAAGACTTTACTCCTCTACTA 60.094 40.741 0.00 0.00 0.00 1.82
4320 5666 7.941431 TCCAAAGACTTTACTCCTCTACTAG 57.059 40.000 0.00 0.00 0.00 2.57
4321 5667 6.377712 TCCAAAGACTTTACTCCTCTACTAGC 59.622 42.308 0.00 0.00 0.00 3.42
4322 5668 6.259638 CAAAGACTTTACTCCTCTACTAGCG 58.740 44.000 0.00 0.00 0.00 4.26
4323 5669 4.453751 AGACTTTACTCCTCTACTAGCGG 58.546 47.826 0.00 0.00 0.00 5.52
4324 5670 4.080413 AGACTTTACTCCTCTACTAGCGGT 60.080 45.833 0.00 0.00 0.00 5.68
4325 5671 4.598022 ACTTTACTCCTCTACTAGCGGTT 58.402 43.478 0.00 0.00 0.00 4.44
4326 5672 4.398673 ACTTTACTCCTCTACTAGCGGTTG 59.601 45.833 0.00 0.00 0.00 3.77
4327 5673 1.765230 ACTCCTCTACTAGCGGTTGG 58.235 55.000 0.00 0.00 0.00 3.77
4328 5674 1.033574 CTCCTCTACTAGCGGTTGGG 58.966 60.000 0.00 0.00 0.00 4.12
4329 5675 0.396695 TCCTCTACTAGCGGTTGGGG 60.397 60.000 0.00 6.83 41.62 4.96
4330 5676 1.442148 CTCTACTAGCGGTTGGGGC 59.558 63.158 0.00 0.00 0.00 5.80
4331 5677 2.106332 CTACTAGCGGTTGGGGCG 59.894 66.667 0.00 0.00 35.00 6.13
4332 5678 4.151582 TACTAGCGGTTGGGGCGC 62.152 66.667 0.00 0.00 35.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.743394 GGAAGCAAAACCATACCCGAG 59.257 52.381 0.00 0.00 0.00 4.63
1 2 1.828979 GGAAGCAAAACCATACCCGA 58.171 50.000 0.00 0.00 0.00 5.14
2 3 0.450184 CGGAAGCAAAACCATACCCG 59.550 55.000 0.00 0.00 0.00 5.28
34 35 1.740296 ATTTTCGGGAGGCACGACG 60.740 57.895 0.00 0.00 40.45 5.12
75 80 7.765695 AAAATGTGCCTCTCATAGAAGAAAA 57.234 32.000 0.00 0.00 0.00 2.29
83 88 4.158394 GGAAGCAAAAATGTGCCTCTCATA 59.842 41.667 0.00 0.00 46.14 2.15
84 89 3.056322 GGAAGCAAAAATGTGCCTCTCAT 60.056 43.478 0.00 0.00 46.14 2.90
95 100 1.541588 GCCTCTCACGGAAGCAAAAAT 59.458 47.619 0.00 0.00 32.03 1.82
96 101 0.951558 GCCTCTCACGGAAGCAAAAA 59.048 50.000 0.00 0.00 32.03 1.94
121 127 2.099141 TCTCGTTTCCAAGAGGCATG 57.901 50.000 0.00 0.00 35.34 4.06
122 128 2.859165 TTCTCGTTTCCAAGAGGCAT 57.141 45.000 0.00 0.00 35.34 4.40
146 152 7.393234 TCTCACAAAAGAAAAGAGGAGAAAACA 59.607 33.333 0.00 0.00 0.00 2.83
155 161 4.853268 GTGCCTCTCACAAAAGAAAAGAG 58.147 43.478 0.00 0.00 44.98 2.85
178 190 1.660333 GCCTCTCGTGAAAGCAAAACG 60.660 52.381 4.73 0.00 38.64 3.60
188 200 2.338620 CAACCGTGCCTCTCGTGA 59.661 61.111 0.00 0.00 0.00 4.35
190 202 2.029073 CACAACCGTGCCTCTCGT 59.971 61.111 0.00 0.00 36.06 4.18
244 283 3.947910 AAACCATGCCTGTCAATGAAG 57.052 42.857 0.00 0.00 0.00 3.02
248 287 2.460757 GCAAAACCATGCCTGTCAAT 57.539 45.000 0.00 0.00 40.49 2.57
249 288 3.984838 GCAAAACCATGCCTGTCAA 57.015 47.368 0.00 0.00 40.49 3.18
270 309 1.404391 GCAAATCCGTACCTCTCGAGA 59.596 52.381 15.70 15.70 0.00 4.04
272 311 1.471119 AGCAAATCCGTACCTCTCGA 58.529 50.000 0.00 0.00 0.00 4.04
280 319 3.186909 CATCTCACGAAGCAAATCCGTA 58.813 45.455 0.00 0.00 34.91 4.02
285 324 2.098607 CCATGCATCTCACGAAGCAAAT 59.901 45.455 0.00 0.00 45.64 2.32
287 326 1.089112 CCATGCATCTCACGAAGCAA 58.911 50.000 0.00 0.00 45.64 3.91
288 327 0.036105 ACCATGCATCTCACGAAGCA 60.036 50.000 0.00 0.00 46.43 3.91
289 328 0.654683 GACCATGCATCTCACGAAGC 59.345 55.000 0.00 0.00 34.59 3.86
290 329 0.926155 CGACCATGCATCTCACGAAG 59.074 55.000 0.00 0.00 0.00 3.79
291 330 0.246360 ACGACCATGCATCTCACGAA 59.754 50.000 15.43 0.00 0.00 3.85
292 331 0.458370 CACGACCATGCATCTCACGA 60.458 55.000 15.43 0.00 0.00 4.35
293 332 2.001357 CACGACCATGCATCTCACG 58.999 57.895 0.00 3.38 0.00 4.35
294 333 1.717937 GCACGACCATGCATCTCAC 59.282 57.895 0.00 0.00 45.39 3.51
295 334 4.206958 GCACGACCATGCATCTCA 57.793 55.556 0.00 0.00 45.39 3.27
301 340 0.313672 TCAAAAAGGCACGACCATGC 59.686 50.000 0.00 0.00 45.34 4.06
302 341 2.791383 TTCAAAAAGGCACGACCATG 57.209 45.000 0.00 0.00 43.14 3.66
303 342 2.542824 CGTTTCAAAAAGGCACGACCAT 60.543 45.455 0.00 0.00 43.14 3.55
304 343 1.202200 CGTTTCAAAAAGGCACGACCA 60.202 47.619 0.00 0.00 43.14 4.02
305 344 1.472990 CGTTTCAAAAAGGCACGACC 58.527 50.000 0.00 0.00 39.61 4.79
306 345 1.472990 CCGTTTCAAAAAGGCACGAC 58.527 50.000 0.00 0.00 31.07 4.34
307 346 3.928343 CCGTTTCAAAAAGGCACGA 57.072 47.368 0.00 0.00 31.07 4.35
315 354 1.390565 TTCCGGAAGCCGTTTCAAAA 58.609 45.000 14.35 0.00 46.80 2.44
318 357 0.887387 CCTTTCCGGAAGCCGTTTCA 60.887 55.000 17.97 0.00 46.80 2.69
411 452 7.811236 ACGTCGAGATCTTCAAAACTAAATACA 59.189 33.333 0.00 0.00 0.00 2.29
413 454 8.024865 TCACGTCGAGATCTTCAAAACTAAATA 58.975 33.333 0.00 0.00 0.00 1.40
416 457 5.765176 TCACGTCGAGATCTTCAAAACTAA 58.235 37.500 0.00 0.00 0.00 2.24
451 492 6.456988 GCGTCTAAATCTCGAACCATTTTCAT 60.457 38.462 2.87 0.00 0.00 2.57
471 512 6.128902 CGTTTTATCTCTTAAAGTGTGCGTCT 60.129 38.462 0.00 0.00 31.57 4.18
535 581 3.350612 GCGCCACTTGCCGTAACA 61.351 61.111 0.00 0.00 36.24 2.41
564 611 3.691609 CCTTCTCAAGTTATGACAAGGGC 59.308 47.826 5.01 0.00 45.52 5.19
574 621 3.583228 TCACTCCCACCTTCTCAAGTTA 58.417 45.455 0.00 0.00 0.00 2.24
578 625 4.453480 AAAATCACTCCCACCTTCTCAA 57.547 40.909 0.00 0.00 0.00 3.02
587 634 8.477419 AGTATTTCTTTCAAAAATCACTCCCA 57.523 30.769 0.00 0.00 0.00 4.37
589 636 8.797438 AGGAGTATTTCTTTCAAAAATCACTCC 58.203 33.333 17.83 17.83 40.93 3.85
606 653 9.901172 ACCGAAATCACTAATTAAGGAGTATTT 57.099 29.630 0.00 0.00 31.82 1.40
608 655 9.543783 GAACCGAAATCACTAATTAAGGAGTAT 57.456 33.333 0.00 0.00 31.82 2.12
616 663 8.624367 TTTCAAGGAACCGAAATCACTAATTA 57.376 30.769 0.00 0.00 0.00 1.40
662 709 1.430075 TCCCTATCCACATAGCGGGTA 59.570 52.381 0.00 0.00 31.82 3.69
663 710 0.190069 TCCCTATCCACATAGCGGGT 59.810 55.000 0.00 0.00 31.82 5.28
664 711 0.898320 CTCCCTATCCACATAGCGGG 59.102 60.000 0.00 0.00 31.82 6.13
784 832 1.062880 CTCTCGAACTACCTGACTCGC 59.937 57.143 0.00 0.00 0.00 5.03
807 855 6.032460 GCGTATCCGAAGAATTTTGTCTTTTG 59.968 38.462 0.00 0.00 37.98 2.44
851 899 1.961394 AGAGTCTTGTGTTCGTGGCTA 59.039 47.619 0.00 0.00 0.00 3.93
882 930 2.223180 GGCGAGTCTTGTGTTCGTTTTT 60.223 45.455 0.00 0.00 36.74 1.94
883 931 1.329599 GGCGAGTCTTGTGTTCGTTTT 59.670 47.619 0.00 0.00 36.74 2.43
884 932 0.935196 GGCGAGTCTTGTGTTCGTTT 59.065 50.000 0.00 0.00 36.74 3.60
885 933 1.213094 CGGCGAGTCTTGTGTTCGTT 61.213 55.000 0.00 0.00 36.74 3.85
899 947 3.932580 ATCTTGCACTTCGCGGCGA 62.933 57.895 22.69 22.69 46.97 5.54
957 1005 0.960861 GTGCAGAACCCTGGCTAACC 60.961 60.000 0.00 0.00 40.72 2.85
958 1006 0.960861 GGTGCAGAACCCTGGCTAAC 60.961 60.000 0.00 0.00 44.02 2.34
989 1037 1.660560 CCCTTCCATGGCTTTCGCTG 61.661 60.000 6.96 0.00 36.09 5.18
1273 1362 0.036577 ACAACAGCAGGCTAGCAGAG 60.037 55.000 18.24 6.49 36.85 3.35
1274 1363 0.321034 CACAACAGCAGGCTAGCAGA 60.321 55.000 18.24 0.00 36.85 4.26
1275 1364 1.919956 GCACAACAGCAGGCTAGCAG 61.920 60.000 18.24 9.62 36.85 4.24
1276 1365 1.968017 GCACAACAGCAGGCTAGCA 60.968 57.895 18.24 0.00 36.85 3.49
1277 1366 2.694760 GGCACAACAGCAGGCTAGC 61.695 63.158 6.04 6.04 35.83 3.42
1278 1367 0.250234 TAGGCACAACAGCAGGCTAG 59.750 55.000 0.00 0.00 39.11 3.42
1279 1368 0.911769 ATAGGCACAACAGCAGGCTA 59.088 50.000 0.00 0.00 43.27 3.93
1280 1369 0.911769 TATAGGCACAACAGCAGGCT 59.088 50.000 0.00 0.00 41.38 4.58
1281 1370 1.303309 CTATAGGCACAACAGCAGGC 58.697 55.000 0.00 0.00 35.83 4.85
1282 1371 2.698855 ACTATAGGCACAACAGCAGG 57.301 50.000 4.43 0.00 35.83 4.85
1283 1372 5.586243 ACAATAACTATAGGCACAACAGCAG 59.414 40.000 4.43 0.00 35.83 4.24
1284 1373 5.496556 ACAATAACTATAGGCACAACAGCA 58.503 37.500 4.43 0.00 35.83 4.41
1285 1374 6.436843 AACAATAACTATAGGCACAACAGC 57.563 37.500 4.43 0.00 0.00 4.40
1286 1375 8.296713 ACAAAACAATAACTATAGGCACAACAG 58.703 33.333 4.43 0.00 0.00 3.16
1287 1376 8.079203 CACAAAACAATAACTATAGGCACAACA 58.921 33.333 4.43 0.00 0.00 3.33
1288 1377 7.061789 GCACAAAACAATAACTATAGGCACAAC 59.938 37.037 4.43 0.00 0.00 3.32
1289 1378 7.087639 GCACAAAACAATAACTATAGGCACAA 58.912 34.615 4.43 0.00 0.00 3.33
1290 1379 6.349777 GGCACAAAACAATAACTATAGGCACA 60.350 38.462 4.43 0.00 0.00 4.57
1291 1380 6.033966 GGCACAAAACAATAACTATAGGCAC 58.966 40.000 4.43 0.00 0.00 5.01
1292 1381 5.712446 TGGCACAAAACAATAACTATAGGCA 59.288 36.000 4.43 0.00 31.92 4.75
1293 1382 6.033966 GTGGCACAAAACAATAACTATAGGC 58.966 40.000 13.86 0.00 44.16 3.93
1294 1383 6.092944 TCGTGGCACAAAACAATAACTATAGG 59.907 38.462 19.09 0.00 44.16 2.57
1295 1384 7.067532 TCGTGGCACAAAACAATAACTATAG 57.932 36.000 19.09 0.00 44.16 1.31
1296 1385 6.402766 GCTCGTGGCACAAAACAATAACTATA 60.403 38.462 19.09 0.00 44.16 1.31
1297 1386 5.619086 GCTCGTGGCACAAAACAATAACTAT 60.619 40.000 19.09 0.00 44.16 2.12
1298 1387 4.319911 GCTCGTGGCACAAAACAATAACTA 60.320 41.667 19.09 0.00 44.16 2.24
1299 1388 3.550030 GCTCGTGGCACAAAACAATAACT 60.550 43.478 19.09 0.00 44.16 2.24
1300 1389 2.724174 GCTCGTGGCACAAAACAATAAC 59.276 45.455 19.09 0.00 44.16 1.89
1301 1390 2.621055 AGCTCGTGGCACAAAACAATAA 59.379 40.909 19.09 0.00 44.16 1.40
1302 1391 2.031245 CAGCTCGTGGCACAAAACAATA 60.031 45.455 19.09 0.00 44.16 1.90
1303 1392 1.032014 AGCTCGTGGCACAAAACAAT 58.968 45.000 19.09 0.00 44.16 2.71
1304 1393 0.100325 CAGCTCGTGGCACAAAACAA 59.900 50.000 19.09 0.00 44.16 2.83
1305 1394 1.723608 CCAGCTCGTGGCACAAAACA 61.724 55.000 19.09 0.00 44.16 2.83
1306 1395 1.008538 CCAGCTCGTGGCACAAAAC 60.009 57.895 19.09 3.62 44.16 2.43
1307 1396 3.431055 CCAGCTCGTGGCACAAAA 58.569 55.556 19.09 1.14 44.16 2.44
1335 1424 4.480537 TGAACCCCAAACCTACCATATGAT 59.519 41.667 3.65 0.00 0.00 2.45
1511 2007 3.445096 CCCCTTTTTGCTCTAGTCCAATG 59.555 47.826 0.00 0.00 0.00 2.82
1555 2059 3.618351 CAGCAATCCTGTTCCTGAGAAT 58.382 45.455 0.00 0.00 36.79 2.40
1616 2282 4.485163 ACCTATTTCTTGTCGCAAAATGC 58.515 39.130 0.00 0.00 40.69 3.56
1629 2295 9.702253 TTCACTCAGTAATCTCTACCTATTTCT 57.298 33.333 0.00 0.00 0.00 2.52
1630 2296 9.738832 GTTCACTCAGTAATCTCTACCTATTTC 57.261 37.037 0.00 0.00 0.00 2.17
1646 2312 7.322664 ACATTTTTCATTTGTGTTCACTCAGT 58.677 30.769 4.59 0.00 0.00 3.41
1670 2337 5.277601 ACGCAGTGTAACATACATTTGAC 57.722 39.130 0.00 0.00 42.51 3.18
1727 2394 6.219473 CACTGATACTTCCCATAAGCTACAG 58.781 44.000 0.00 0.00 0.00 2.74
1728 2395 5.070446 CCACTGATACTTCCCATAAGCTACA 59.930 44.000 0.00 0.00 0.00 2.74
1729 2396 5.542779 CCACTGATACTTCCCATAAGCTAC 58.457 45.833 0.00 0.00 0.00 3.58
1730 2397 4.040461 GCCACTGATACTTCCCATAAGCTA 59.960 45.833 0.00 0.00 0.00 3.32
1731 2398 3.181450 GCCACTGATACTTCCCATAAGCT 60.181 47.826 0.00 0.00 0.00 3.74
1852 2520 6.122850 TGATATTCCATGCAAGAAGAAACG 57.877 37.500 8.33 0.00 0.00 3.60
1930 2608 4.763073 TGGATGATTGTGTCTCTTAGCAG 58.237 43.478 0.00 0.00 0.00 4.24
1978 2656 5.851177 CGGCAACATTTTACAGTTTAGTGAG 59.149 40.000 0.00 0.00 0.00 3.51
2001 2679 7.416154 TTTGTACAATAAGGTCAGAAACTCG 57.584 36.000 9.56 0.00 0.00 4.18
2046 2724 7.539366 GGTTATTGTGCGTAAATGTGTTTATGT 59.461 33.333 0.00 0.00 38.49 2.29
2159 2839 7.928873 ACGATAATTAATATGGATCCAAGGGT 58.071 34.615 20.67 4.42 0.00 4.34
2164 2844 9.581289 AAACCAACGATAATTAATATGGATCCA 57.419 29.630 18.88 18.88 0.00 3.41
2216 2896 9.759473 AATACTCCCTCCAATCCATATTAATTG 57.241 33.333 0.00 1.40 33.57 2.32
2296 2976 6.325545 TGCTCTTATATTTCTTTACGGAGGGA 59.674 38.462 0.00 0.00 0.00 4.20
2297 2977 6.522054 TGCTCTTATATTTCTTTACGGAGGG 58.478 40.000 0.00 0.00 0.00 4.30
2298 2978 8.091449 AGATGCTCTTATATTTCTTTACGGAGG 58.909 37.037 0.00 0.00 0.00 4.30
2313 2993 9.979578 CTACTTTTGTGATCTAGATGCTCTTAT 57.020 33.333 10.74 0.00 0.00 1.73
2314 2994 8.972127 ACTACTTTTGTGATCTAGATGCTCTTA 58.028 33.333 10.74 0.00 0.00 2.10
2315 2995 7.763528 CACTACTTTTGTGATCTAGATGCTCTT 59.236 37.037 10.74 0.00 37.60 2.85
2316 2996 7.123397 TCACTACTTTTGTGATCTAGATGCTCT 59.877 37.037 10.74 0.00 39.23 4.09
2317 2997 7.261325 TCACTACTTTTGTGATCTAGATGCTC 58.739 38.462 10.74 0.00 39.23 4.26
2318 2998 7.175347 TCACTACTTTTGTGATCTAGATGCT 57.825 36.000 10.74 0.00 39.23 3.79
2328 3008 6.220930 AGCGTTTAGATCACTACTTTTGTGA 58.779 36.000 0.00 0.00 46.58 3.58
2329 3009 6.366332 AGAGCGTTTAGATCACTACTTTTGTG 59.634 38.462 0.00 0.00 37.82 3.33
2330 3010 6.456501 AGAGCGTTTAGATCACTACTTTTGT 58.543 36.000 0.00 0.00 37.82 2.83
2331 3011 6.952935 AGAGCGTTTAGATCACTACTTTTG 57.047 37.500 0.00 0.00 37.82 2.44
2337 3017 9.909644 GGAAATATAAGAGCGTTTAGATCACTA 57.090 33.333 0.00 0.00 37.82 2.74
2338 3018 8.643324 AGGAAATATAAGAGCGTTTAGATCACT 58.357 33.333 0.00 0.00 37.82 3.41
2339 3019 8.819643 AGGAAATATAAGAGCGTTTAGATCAC 57.180 34.615 0.00 0.00 37.82 3.06
2342 3022 9.408069 CGTAAGGAAATATAAGAGCGTTTAGAT 57.592 33.333 0.00 0.00 0.00 1.98
2343 3023 8.792831 CGTAAGGAAATATAAGAGCGTTTAGA 57.207 34.615 0.00 0.00 0.00 2.10
2363 3043 4.189231 CAAAATGGTACTCCCTCCGTAAG 58.811 47.826 0.00 0.00 0.00 2.34
2364 3044 3.583966 ACAAAATGGTACTCCCTCCGTAA 59.416 43.478 0.00 0.00 0.00 3.18
2365 3045 3.055675 CACAAAATGGTACTCCCTCCGTA 60.056 47.826 0.00 0.00 0.00 4.02
2366 3046 1.982958 ACAAAATGGTACTCCCTCCGT 59.017 47.619 0.00 0.00 0.00 4.69
2367 3047 2.356135 CACAAAATGGTACTCCCTCCG 58.644 52.381 0.00 0.00 0.00 4.63
2368 3048 2.092323 GCACAAAATGGTACTCCCTCC 58.908 52.381 0.00 0.00 0.00 4.30
2369 3049 2.488153 GTGCACAAAATGGTACTCCCTC 59.512 50.000 13.17 0.00 0.00 4.30
2370 3050 2.158534 TGTGCACAAAATGGTACTCCCT 60.159 45.455 19.28 0.00 0.00 4.20
2371 3051 2.235016 TGTGCACAAAATGGTACTCCC 58.765 47.619 19.28 0.00 0.00 4.30
2372 3052 4.298332 CTTTGTGCACAAAATGGTACTCC 58.702 43.478 36.72 0.34 44.24 3.85
2373 3053 3.735746 GCTTTGTGCACAAAATGGTACTC 59.264 43.478 36.72 18.54 44.24 2.59
2374 3054 3.384467 AGCTTTGTGCACAAAATGGTACT 59.616 39.130 36.72 25.10 44.24 2.73
2375 3055 3.716601 AGCTTTGTGCACAAAATGGTAC 58.283 40.909 36.72 23.72 44.24 3.34
2411 3091 1.064240 ACTTAGGGGCCCAATAAACCG 60.064 52.381 27.72 12.33 0.00 4.44
2428 3108 5.241728 GGTCAAAGTCTGGCTCAAAATACTT 59.758 40.000 0.00 0.00 0.00 2.24
2429 3109 4.762251 GGTCAAAGTCTGGCTCAAAATACT 59.238 41.667 0.00 0.00 0.00 2.12
2584 3264 7.243091 GCCCCCTCTTATTTTGGGTTAATATA 58.757 38.462 0.00 0.00 39.31 0.86
2586 3266 5.460416 GCCCCCTCTTATTTTGGGTTAATA 58.540 41.667 0.00 0.00 39.31 0.98
2607 3289 2.124024 GTCCGGGGTTATTGGGCC 60.124 66.667 0.00 0.00 0.00 5.80
2608 3290 2.515290 CGTCCGGGGTTATTGGGC 60.515 66.667 0.00 0.00 0.00 5.36
2611 3293 1.145377 CCTCCGTCCGGGGTTATTG 59.855 63.158 0.00 0.00 32.73 1.90
2617 3299 4.133373 TACTCCCTCCGTCCGGGG 62.133 72.222 0.00 1.46 42.23 5.73
2722 3404 1.137675 CGATCAATCTGGCTCAGGACA 59.862 52.381 0.00 0.00 31.51 4.02
2743 3425 5.312120 TGTTAAGGAGAGATGTTCGACTC 57.688 43.478 0.00 0.00 0.00 3.36
2806 3488 1.605451 AGCAAATGCAGCAGCCTCA 60.605 52.632 8.28 0.00 45.16 3.86
2963 3645 5.363101 TGTGCTATCTTCAGTCATTCCATC 58.637 41.667 0.00 0.00 0.00 3.51
2981 3663 0.249911 GTCCTGTTCGTCCTTGTGCT 60.250 55.000 0.00 0.00 0.00 4.40
2996 3678 1.073923 AGGGATTCTGTTTTGCGTCCT 59.926 47.619 0.00 0.00 0.00 3.85
3017 3699 1.742831 TGAATTACGGCTTGATGTGCC 59.257 47.619 0.00 0.00 46.42 5.01
3022 3704 4.384056 CTCCTGATGAATTACGGCTTGAT 58.616 43.478 0.00 0.00 0.00 2.57
3025 3707 2.158755 CCCTCCTGATGAATTACGGCTT 60.159 50.000 0.00 0.00 0.00 4.35
3101 3783 4.079970 CCAGCAGCCTTCATGATTGATAT 58.920 43.478 0.00 0.00 0.00 1.63
3358 4040 0.831966 ATATTCACACGGCCCGGTTA 59.168 50.000 8.57 0.00 0.00 2.85
3399 4083 2.290641 GCAGTTCCTACACAACACCAAG 59.709 50.000 0.00 0.00 0.00 3.61
3400 4084 2.294074 GCAGTTCCTACACAACACCAA 58.706 47.619 0.00 0.00 0.00 3.67
3425 4109 5.869350 AGCATTATACAAGAAACAACTCGC 58.131 37.500 0.00 0.00 0.00 5.03
3469 4153 3.134081 TCAGGGCTAAAGAGGGAAATACG 59.866 47.826 0.00 0.00 0.00 3.06
3500 4186 1.072173 AGCGGCATCATACATAAGCCA 59.928 47.619 1.45 0.00 45.47 4.75
3551 4237 6.995686 ACATAAACACTAATGAATCCGCCATA 59.004 34.615 0.00 0.00 0.00 2.74
3552 4238 5.827797 ACATAAACACTAATGAATCCGCCAT 59.172 36.000 0.00 0.00 0.00 4.40
3553 4239 5.189928 ACATAAACACTAATGAATCCGCCA 58.810 37.500 0.00 0.00 0.00 5.69
3561 4247 9.237187 TCAATTAGGCAACATAAACACTAATGA 57.763 29.630 0.00 0.00 41.41 2.57
3565 4251 8.836413 GCTATCAATTAGGCAACATAAACACTA 58.164 33.333 0.00 0.00 41.41 2.74
3598 4286 4.276678 CCTGCATATGAACGGAATCATTGT 59.723 41.667 6.97 0.00 40.44 2.71
3607 4295 1.227527 TCCGCCTGCATATGAACGG 60.228 57.895 6.97 12.62 41.92 4.44
3655 4343 1.693606 TGAGACAACATGGACAGAGCA 59.306 47.619 0.00 0.00 0.00 4.26
3718 4406 6.422333 TCATTCATCAGGGCATAAAAGTACA 58.578 36.000 0.00 0.00 0.00 2.90
3729 4417 5.532406 TGTAAAGCTATTCATTCATCAGGGC 59.468 40.000 0.00 0.00 0.00 5.19
3827 4515 0.606604 ACATCCCCGTATCCGTATGC 59.393 55.000 0.00 0.00 0.00 3.14
3833 4521 4.204012 TGAATTGAAACATCCCCGTATCC 58.796 43.478 0.00 0.00 0.00 2.59
3859 4547 3.132925 CCAAACAAAACTGCATTCCCTG 58.867 45.455 0.00 0.00 0.00 4.45
3860 4548 2.771372 ACCAAACAAAACTGCATTCCCT 59.229 40.909 0.00 0.00 0.00 4.20
3861 4549 3.192541 ACCAAACAAAACTGCATTCCC 57.807 42.857 0.00 0.00 0.00 3.97
3862 4550 3.242706 GCAACCAAACAAAACTGCATTCC 60.243 43.478 0.00 0.00 0.00 3.01
3863 4551 3.622612 AGCAACCAAACAAAACTGCATTC 59.377 39.130 0.00 0.00 32.21 2.67
3864 4552 3.374678 CAGCAACCAAACAAAACTGCATT 59.625 39.130 0.00 0.00 32.21 3.56
3865 4553 2.937799 CAGCAACCAAACAAAACTGCAT 59.062 40.909 0.00 0.00 32.21 3.96
3866 4554 2.289320 ACAGCAACCAAACAAAACTGCA 60.289 40.909 0.00 0.00 32.21 4.41
3867 4555 2.345876 ACAGCAACCAAACAAAACTGC 58.654 42.857 0.00 0.00 0.00 4.40
3868 4556 5.108517 ACATACAGCAACCAAACAAAACTG 58.891 37.500 0.00 0.00 0.00 3.16
3869 4557 5.337578 ACATACAGCAACCAAACAAAACT 57.662 34.783 0.00 0.00 0.00 2.66
3870 4558 6.699642 ACATACATACAGCAACCAAACAAAAC 59.300 34.615 0.00 0.00 0.00 2.43
3871 4559 6.810911 ACATACATACAGCAACCAAACAAAA 58.189 32.000 0.00 0.00 0.00 2.44
3872 4560 6.398234 ACATACATACAGCAACCAAACAAA 57.602 33.333 0.00 0.00 0.00 2.83
3873 4561 7.695480 ATACATACATACAGCAACCAAACAA 57.305 32.000 0.00 0.00 0.00 2.83
3874 4562 7.148154 GGAATACATACATACAGCAACCAAACA 60.148 37.037 0.00 0.00 0.00 2.83
3875 4563 7.067008 AGGAATACATACATACAGCAACCAAAC 59.933 37.037 0.00 0.00 0.00 2.93
3876 4564 7.066887 CAGGAATACATACATACAGCAACCAAA 59.933 37.037 0.00 0.00 0.00 3.28
3877 4565 6.542005 CAGGAATACATACATACAGCAACCAA 59.458 38.462 0.00 0.00 0.00 3.67
3878 4566 6.054941 CAGGAATACATACATACAGCAACCA 58.945 40.000 0.00 0.00 0.00 3.67
3879 4567 6.055588 ACAGGAATACATACATACAGCAACC 58.944 40.000 0.00 0.00 0.00 3.77
3880 4568 7.409697 CAACAGGAATACATACATACAGCAAC 58.590 38.462 0.00 0.00 0.00 4.17
3881 4569 6.038161 GCAACAGGAATACATACATACAGCAA 59.962 38.462 0.00 0.00 0.00 3.91
3882 4570 5.527214 GCAACAGGAATACATACATACAGCA 59.473 40.000 0.00 0.00 0.00 4.41
3883 4571 5.333339 CGCAACAGGAATACATACATACAGC 60.333 44.000 0.00 0.00 0.00 4.40
3884 4572 5.177511 CCGCAACAGGAATACATACATACAG 59.822 44.000 0.00 0.00 0.00 2.74
3885 4573 5.053811 CCGCAACAGGAATACATACATACA 58.946 41.667 0.00 0.00 0.00 2.29
3886 4574 4.451096 CCCGCAACAGGAATACATACATAC 59.549 45.833 0.00 0.00 0.00 2.39
3887 4575 4.101898 ACCCGCAACAGGAATACATACATA 59.898 41.667 0.00 0.00 0.00 2.29
3888 4576 3.118038 ACCCGCAACAGGAATACATACAT 60.118 43.478 0.00 0.00 0.00 2.29
3889 4577 2.237643 ACCCGCAACAGGAATACATACA 59.762 45.455 0.00 0.00 0.00 2.29
3890 4578 2.914059 ACCCGCAACAGGAATACATAC 58.086 47.619 0.00 0.00 0.00 2.39
3891 4579 3.707611 AGTACCCGCAACAGGAATACATA 59.292 43.478 0.00 0.00 0.00 2.29
3892 4580 2.504175 AGTACCCGCAACAGGAATACAT 59.496 45.455 0.00 0.00 0.00 2.29
3893 4581 1.903860 AGTACCCGCAACAGGAATACA 59.096 47.619 0.00 0.00 0.00 2.29
3894 4582 2.685850 AGTACCCGCAACAGGAATAC 57.314 50.000 0.00 0.00 0.00 1.89
3895 4583 5.120399 CAATTAGTACCCGCAACAGGAATA 58.880 41.667 0.00 0.00 0.00 1.75
3896 4584 3.926058 ATTAGTACCCGCAACAGGAAT 57.074 42.857 0.00 0.00 0.00 3.01
3897 4585 3.340034 CAATTAGTACCCGCAACAGGAA 58.660 45.455 0.00 0.00 0.00 3.36
3898 4586 2.355310 CCAATTAGTACCCGCAACAGGA 60.355 50.000 0.00 0.00 0.00 3.86
3899 4587 2.014128 CCAATTAGTACCCGCAACAGG 58.986 52.381 0.00 0.00 0.00 4.00
3900 4588 1.400494 GCCAATTAGTACCCGCAACAG 59.600 52.381 0.00 0.00 0.00 3.16
3901 4589 1.271434 TGCCAATTAGTACCCGCAACA 60.271 47.619 0.00 0.00 0.00 3.33
3902 4590 1.455248 TGCCAATTAGTACCCGCAAC 58.545 50.000 0.00 0.00 0.00 4.17
3903 4591 2.428544 ATGCCAATTAGTACCCGCAA 57.571 45.000 0.00 0.00 0.00 4.85
3904 4592 2.224426 CCTATGCCAATTAGTACCCGCA 60.224 50.000 0.00 0.00 0.00 5.69
3905 4593 2.423577 CCTATGCCAATTAGTACCCGC 58.576 52.381 0.00 0.00 0.00 6.13
3906 4594 2.038557 AGCCTATGCCAATTAGTACCCG 59.961 50.000 0.00 0.00 38.69 5.28
3907 4595 3.790089 AGCCTATGCCAATTAGTACCC 57.210 47.619 0.00 0.00 38.69 3.69
3908 4596 3.253432 GCAAGCCTATGCCAATTAGTACC 59.747 47.826 0.00 0.00 40.49 3.34
3909 4597 4.489679 GCAAGCCTATGCCAATTAGTAC 57.510 45.455 0.00 0.00 40.49 2.73
3919 4607 1.593196 TTCATACGGCAAGCCTATGC 58.407 50.000 17.98 0.00 45.67 3.14
3920 4608 3.402110 TCATTCATACGGCAAGCCTATG 58.598 45.455 9.73 14.53 33.01 2.23
3921 4609 3.769739 TCATTCATACGGCAAGCCTAT 57.230 42.857 9.73 3.73 0.00 2.57
3922 4610 3.466836 CTTCATTCATACGGCAAGCCTA 58.533 45.455 9.73 1.45 0.00 3.93
3923 4611 2.292267 CTTCATTCATACGGCAAGCCT 58.708 47.619 9.73 0.00 0.00 4.58
3924 4612 1.334869 CCTTCATTCATACGGCAAGCC 59.665 52.381 0.00 0.00 0.00 4.35
3925 4613 2.288666 TCCTTCATTCATACGGCAAGC 58.711 47.619 0.00 0.00 0.00 4.01
3926 4614 3.242870 GCTTCCTTCATTCATACGGCAAG 60.243 47.826 0.00 0.00 0.00 4.01
3927 4615 2.682856 GCTTCCTTCATTCATACGGCAA 59.317 45.455 0.00 0.00 0.00 4.52
3928 4616 2.288666 GCTTCCTTCATTCATACGGCA 58.711 47.619 0.00 0.00 0.00 5.69
3929 4617 2.288666 TGCTTCCTTCATTCATACGGC 58.711 47.619 0.00 0.00 0.00 5.68
3930 4618 4.635765 TCTTTGCTTCCTTCATTCATACGG 59.364 41.667 0.00 0.00 0.00 4.02
3931 4619 5.801350 TCTTTGCTTCCTTCATTCATACG 57.199 39.130 0.00 0.00 0.00 3.06
3932 4620 7.540055 CAGTTTCTTTGCTTCCTTCATTCATAC 59.460 37.037 0.00 0.00 0.00 2.39
3933 4621 7.596494 CAGTTTCTTTGCTTCCTTCATTCATA 58.404 34.615 0.00 0.00 0.00 2.15
3934 4622 6.453092 CAGTTTCTTTGCTTCCTTCATTCAT 58.547 36.000 0.00 0.00 0.00 2.57
3935 4623 5.737063 GCAGTTTCTTTGCTTCCTTCATTCA 60.737 40.000 0.00 0.00 38.51 2.57
3936 4624 4.683320 GCAGTTTCTTTGCTTCCTTCATTC 59.317 41.667 0.00 0.00 38.51 2.67
3937 4625 4.625028 GCAGTTTCTTTGCTTCCTTCATT 58.375 39.130 0.00 0.00 38.51 2.57
3938 4626 3.304928 CGCAGTTTCTTTGCTTCCTTCAT 60.305 43.478 0.00 0.00 39.38 2.57
3939 4627 2.033299 CGCAGTTTCTTTGCTTCCTTCA 59.967 45.455 0.00 0.00 39.38 3.02
3940 4628 2.033424 ACGCAGTTTCTTTGCTTCCTTC 59.967 45.455 0.00 0.00 37.78 3.46
3941 4629 2.024414 ACGCAGTTTCTTTGCTTCCTT 58.976 42.857 0.00 0.00 37.78 3.36
3942 4630 1.334869 CACGCAGTTTCTTTGCTTCCT 59.665 47.619 0.00 0.00 41.61 3.36
3943 4631 1.758783 CACGCAGTTTCTTTGCTTCC 58.241 50.000 0.00 0.00 41.61 3.46
3944 4632 1.123655 GCACGCAGTTTCTTTGCTTC 58.876 50.000 0.00 0.00 41.61 3.86
3945 4633 0.592247 CGCACGCAGTTTCTTTGCTT 60.592 50.000 0.00 0.00 41.61 3.91
3946 4634 1.009675 CGCACGCAGTTTCTTTGCT 60.010 52.632 0.00 0.00 41.61 3.91
3947 4635 0.993746 CTCGCACGCAGTTTCTTTGC 60.994 55.000 0.00 0.00 41.61 3.68
3948 4636 0.993746 GCTCGCACGCAGTTTCTTTG 60.994 55.000 0.00 0.00 41.61 2.77
3949 4637 1.160329 AGCTCGCACGCAGTTTCTTT 61.160 50.000 0.00 0.00 41.61 2.52
3950 4638 0.319555 TAGCTCGCACGCAGTTTCTT 60.320 50.000 0.00 0.00 41.61 2.52
3951 4639 1.009389 GTAGCTCGCACGCAGTTTCT 61.009 55.000 0.00 0.00 41.61 2.52
3952 4640 1.009389 AGTAGCTCGCACGCAGTTTC 61.009 55.000 0.00 0.00 41.61 2.78
3953 4641 1.006102 AGTAGCTCGCACGCAGTTT 60.006 52.632 0.00 0.00 41.61 2.66
3954 4642 1.734477 CAGTAGCTCGCACGCAGTT 60.734 57.895 0.00 0.00 41.61 3.16
3956 4644 1.134530 GTACAGTAGCTCGCACGCAG 61.135 60.000 0.00 0.00 0.00 5.18
3957 4645 1.154093 GTACAGTAGCTCGCACGCA 60.154 57.895 0.00 0.00 0.00 5.24
3958 4646 1.134530 CAGTACAGTAGCTCGCACGC 61.135 60.000 0.00 0.00 0.00 5.34
3959 4647 0.168348 ACAGTACAGTAGCTCGCACG 59.832 55.000 0.00 0.00 0.00 5.34
3960 4648 3.064958 TCATACAGTACAGTAGCTCGCAC 59.935 47.826 4.36 0.00 0.00 5.34
3961 4649 3.275999 TCATACAGTACAGTAGCTCGCA 58.724 45.455 4.36 0.00 0.00 5.10
3962 4650 3.965292 TCATACAGTACAGTAGCTCGC 57.035 47.619 4.36 0.00 0.00 5.03
3963 4651 4.035792 AGCTTCATACAGTACAGTAGCTCG 59.964 45.833 7.40 0.00 0.00 5.03
3964 4652 5.277825 CAGCTTCATACAGTACAGTAGCTC 58.722 45.833 9.68 0.00 0.00 4.09
3965 4653 4.440802 GCAGCTTCATACAGTACAGTAGCT 60.441 45.833 7.40 7.40 0.00 3.32
3966 4654 3.799420 GCAGCTTCATACAGTACAGTAGC 59.201 47.826 4.36 3.85 0.00 3.58
3967 4655 4.038361 CGCAGCTTCATACAGTACAGTAG 58.962 47.826 4.36 0.00 0.00 2.57
3968 4656 3.442625 ACGCAGCTTCATACAGTACAGTA 59.557 43.478 0.13 0.13 0.00 2.74
3969 4657 2.231478 ACGCAGCTTCATACAGTACAGT 59.769 45.455 0.00 0.00 0.00 3.55
3970 4658 2.600420 CACGCAGCTTCATACAGTACAG 59.400 50.000 0.00 0.00 0.00 2.74
3971 4659 2.606108 CACGCAGCTTCATACAGTACA 58.394 47.619 0.00 0.00 0.00 2.90
3972 4660 1.324736 GCACGCAGCTTCATACAGTAC 59.675 52.381 0.00 0.00 41.15 2.73
3973 4661 1.067213 TGCACGCAGCTTCATACAGTA 60.067 47.619 2.02 0.00 45.94 2.74
3974 4662 0.320683 TGCACGCAGCTTCATACAGT 60.321 50.000 2.02 0.00 45.94 3.55
3975 4663 1.012086 ATGCACGCAGCTTCATACAG 58.988 50.000 0.00 0.00 45.94 2.74
3976 4664 0.728542 CATGCACGCAGCTTCATACA 59.271 50.000 0.00 0.00 45.94 2.29
3977 4665 0.590732 GCATGCACGCAGCTTCATAC 60.591 55.000 14.21 0.00 45.94 2.39
3978 4666 1.025647 TGCATGCACGCAGCTTCATA 61.026 50.000 18.46 0.00 45.94 2.15
3979 4667 1.663379 ATGCATGCACGCAGCTTCAT 61.663 50.000 25.37 0.00 46.99 2.57
3980 4668 1.868987 AATGCATGCACGCAGCTTCA 61.869 50.000 25.37 0.00 46.99 3.02
3981 4669 0.734942 AAATGCATGCACGCAGCTTC 60.735 50.000 25.37 0.00 46.99 3.86
3982 4670 0.320073 AAAATGCATGCACGCAGCTT 60.320 45.000 25.37 9.57 46.99 3.74
3983 4671 1.011968 CAAAATGCATGCACGCAGCT 61.012 50.000 25.37 2.19 46.99 4.24
3984 4672 1.418367 CAAAATGCATGCACGCAGC 59.582 52.632 25.37 4.39 46.99 5.25
3985 4673 1.418367 GCAAAATGCATGCACGCAG 59.582 52.632 25.37 14.69 46.99 5.18
3995 4683 1.339711 GGTGATCACGTGCAAAATGC 58.660 50.000 19.33 0.00 45.29 3.56
3996 4684 1.069296 ACGGTGATCACGTGCAAAATG 60.069 47.619 19.33 1.82 43.78 2.32
3997 4685 1.196808 GACGGTGATCACGTGCAAAAT 59.803 47.619 22.16 0.00 45.68 1.82
3998 4686 0.584396 GACGGTGATCACGTGCAAAA 59.416 50.000 22.16 0.00 45.68 2.44
3999 4687 0.249699 AGACGGTGATCACGTGCAAA 60.250 50.000 22.16 0.00 45.68 3.68
4000 4688 0.249699 AAGACGGTGATCACGTGCAA 60.250 50.000 22.16 0.00 45.68 4.08
4001 4689 0.943835 CAAGACGGTGATCACGTGCA 60.944 55.000 22.16 0.33 45.68 4.57
4002 4690 1.781555 CAAGACGGTGATCACGTGC 59.218 57.895 22.16 13.18 45.68 5.34
4003 4691 1.626654 GGCAAGACGGTGATCACGTG 61.627 60.000 22.16 17.99 45.68 4.49
4005 4693 1.354337 CTGGCAAGACGGTGATCACG 61.354 60.000 19.33 16.15 37.36 4.35
4006 4694 0.320771 ACTGGCAAGACGGTGATCAC 60.321 55.000 17.91 17.91 0.00 3.06
4007 4695 2.057830 ACTGGCAAGACGGTGATCA 58.942 52.632 0.00 0.00 0.00 2.92
4012 4700 4.235762 ACGCACTGGCAAGACGGT 62.236 61.111 11.88 0.00 41.24 4.83
4013 4701 3.716006 CACGCACTGGCAAGACGG 61.716 66.667 11.88 0.00 41.24 4.79
4014 4702 2.047151 AAACACGCACTGGCAAGACG 62.047 55.000 0.00 0.19 41.24 4.18
4015 4703 0.100503 AAAACACGCACTGGCAAGAC 59.899 50.000 0.00 0.00 41.24 3.01
4016 4704 0.100325 CAAAACACGCACTGGCAAGA 59.900 50.000 0.00 0.00 41.24 3.02
4017 4705 0.871163 CCAAAACACGCACTGGCAAG 60.871 55.000 0.00 0.00 41.24 4.01
4018 4706 1.140589 CCAAAACACGCACTGGCAA 59.859 52.632 0.00 0.00 41.24 4.52
4019 4707 2.804167 CCAAAACACGCACTGGCA 59.196 55.556 0.00 0.00 41.24 4.92
4020 4708 2.658268 GCCAAAACACGCACTGGC 60.658 61.111 0.00 0.00 46.95 4.85
4021 4709 0.179113 AAAGCCAAAACACGCACTGG 60.179 50.000 0.00 0.00 0.00 4.00
4022 4710 1.199624 GAAAGCCAAAACACGCACTG 58.800 50.000 0.00 0.00 0.00 3.66
4023 4711 1.102978 AGAAAGCCAAAACACGCACT 58.897 45.000 0.00 0.00 0.00 4.40
4024 4712 1.199624 CAGAAAGCCAAAACACGCAC 58.800 50.000 0.00 0.00 0.00 5.34
4025 4713 0.527385 GCAGAAAGCCAAAACACGCA 60.527 50.000 0.00 0.00 37.23 5.24
4026 4714 2.216203 GCAGAAAGCCAAAACACGC 58.784 52.632 0.00 0.00 37.23 5.34
4099 4787 9.099454 GAAAATCGAGATTTCAGGTATGTAGTT 57.901 33.333 17.11 0.00 39.88 2.24
4100 4788 8.258007 TGAAAATCGAGATTTCAGGTATGTAGT 58.742 33.333 19.54 0.00 39.88 2.73
4101 4789 8.543774 GTGAAAATCGAGATTTCAGGTATGTAG 58.456 37.037 22.39 0.00 39.88 2.74
4102 4790 8.258007 AGTGAAAATCGAGATTTCAGGTATGTA 58.742 33.333 22.39 3.30 39.88 2.29
4103 4791 7.106239 AGTGAAAATCGAGATTTCAGGTATGT 58.894 34.615 22.39 7.18 39.88 2.29
4104 4792 7.545362 AGTGAAAATCGAGATTTCAGGTATG 57.455 36.000 22.39 0.00 39.88 2.39
4105 4793 7.066284 CCAAGTGAAAATCGAGATTTCAGGTAT 59.934 37.037 22.39 11.09 39.88 2.73
4106 4794 6.371548 CCAAGTGAAAATCGAGATTTCAGGTA 59.628 38.462 22.39 5.25 39.88 3.08
4107 4795 5.182001 CCAAGTGAAAATCGAGATTTCAGGT 59.818 40.000 22.39 13.80 39.88 4.00
4108 4796 5.412594 TCCAAGTGAAAATCGAGATTTCAGG 59.587 40.000 22.39 19.96 39.88 3.86
4183 5522 8.869109 CCATCTCTCCTATTCATTTCTTCTACT 58.131 37.037 0.00 0.00 0.00 2.57
4185 5524 7.512058 AGCCATCTCTCCTATTCATTTCTTCTA 59.488 37.037 0.00 0.00 0.00 2.10
4196 5535 0.683973 CGCCAGCCATCTCTCCTATT 59.316 55.000 0.00 0.00 0.00 1.73
4199 5538 2.042537 TCGCCAGCCATCTCTCCT 60.043 61.111 0.00 0.00 0.00 3.69
4200 5539 1.109920 TACTCGCCAGCCATCTCTCC 61.110 60.000 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.