>input_sequence_34058
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-------ATGGAAGGGGAGGAGGAGATCGGCCTCGTCCTCGCCCGCGCCTCCGACCTTCGCTCCAGGATCTCCGCCTGCG
CTGCCGCCGCACGGCCACCGCCGCGGCTGGGTGCCGGGGAGGAGGACGACGGCGGAGAGGAGGAGGAAGAGGAGGTGGAG
GTGGAGAGCCTGGTAGGCATCAACGACGCGCTCGAGTCGCTCGAGCGGCAGCTCGCCTCCCTGCAGGTCCGGTTCCTATT
CCTGGTTGGTCATTCCATAAAGATGGTTTTTTTA-----------------------------------------TTGTT
GCTCTGCTAGCCTGCTGTTGTGCCTATAGTTATTGTTTTGTGCCACGAGCTGGAGTTGATATGATCATATGGTAGGTTTG
GGGTTCAATTACTGCATTTTTGTTCAACGTCTTACTGTATTTTCGTGAGGAACCAAATCTACGCTTGCTTAGCATGATGT
TACAGACAGAGGAAAAGATTGATAGCCC----------------------------------------------------
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----------------------------------TAATTAGTTGTTCATTGCCTGGTGGCTGCATCCAATTCC-AGCCTC
ATTTGGC-------ATTGGACTAGAGC-AAAAAGGGGTAGTGTAAGATGGATTCTGTGATTC--TCAGGAACAGGATTGC
TGGTTAACTAA---------------------------------------------------------------------
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-----------TTGTGGGTAAGGTACAGATTGTATTAAAACGCATTTTGCGACAAGAAATAGGTAGAGATTACTGAGTGA
ACAC-AAATGAAAAATGTCAAATGTATGTTACACTGCGTGGTTTACAAAGAGAGATAATTTTCACTTTGCTTACTGTAGC
TTATGGGAAGTATCAGTGGCCAGCACATCTGCGCATTCCTTGTA-GCACAAGCTCGCATGCTTTTCTTCTGTTTTTTGTG
AAAAAAACTGGTATTCCATCATATGGAAATTTGCCTATGC--------GTTTCTTCTTGCATGGAATATCAACTGTTAAG
AACTGTAT--GGAATTTTCCTATGTTAGCACAAAAAGGAAGGTCATTCTGCTAAGAGACACAATCATCCATTGAGATGAA
AATTTCTGCTTCGTGCTCACTAAACTGTAAAATGTTGCCGAGTTTCTGACCTTATTGTACAAAATGCTTAGTTTAAGATA
ATGACATAAACACATTTACGCACAATAACCC--AAAGGGTATCAAACGTGCGAAGTACTTACATTACTACTGCTATATGT
GAGCCCATTGGATGACACTTGCCTCAAGAAATTAGTACACCCTTGGATCCATATTAATTATCGTTGGTTTAGTACAACTT
GTACTAAATCAGCAACAATTAATATGGATTGGAGGGAGTATTTTCTTTTGGACATCAGTAACTGTACCAGGCATATGGTG
TTCTTAGCTTGATACTCCCTCCGTAAAGAAATATAAGAGCATCTAGATCACAAAAGTAGTGATCTAAACGCTCTTATATT
TCCTTACGGAGGGAGTACCATTTTGTGCACAAAGCTTACTAACTCCGTCCCGGTTTATTGGGCCCCTAAGTATTTTGAGC
CAGACTTTGACCATCTGTATGACAAATAAAATATAAAGTATATGCTACAAAAGGCACATTGTTGGATTTGTATTTGAAAG
AGTTTTCCGATGATATAATTTTTGTAACATATAGTTTATATTTTATTAGTTAAATTCATAGGTTATA--TTAACCCAAAA
TAAGAGGGGGCCCAATAACCCCGGACGGAGGGAGTACATGTTTCTGTTTTGGAAAATAAGTAGCTTACCACCTTATTGCC
ACTGCCAGGACCTCCAACACCAACAAAGATATGAACGAGAAACTGTCCTGAGCCAGATTGATCGGAGTCGAACATCTCTC
CTTAACAAGCTGAAAGAATACAAGGGAGAGGACTGTGAAGCAATCCATGAGGCTGCTGCATTTGCTGGTGAAAAAATCGA
AAATGATGATGGTCTCATCCTACCTCCTTACTCGGGCCATGTCACCAATTCATTTGTGCTCGATGATCTCTATCCTGCAA
ACTACGTGTCCAAGCCCAAGTGCCTGCACAACGGACTGCGTTCTGATGGAATGACTGAAGATAGCACAAGGACGAACAGG
ACGCAAAACAGAATCCCTGGCACATCAAGCCGTAATTCATCAGGAGGGATCAGATCTTTGATCGGATGGATGGCTAAAAC
AGCGGTCATGATTGTGGGCGCCATATCAATCATGAAGGCTGCTGGCTACGAGCCCACAATAGGGAGGAGCGGCATAAAAC
TGGACATTGCAGGTCTGTTGGGTAAAGAGGCGGCTGGTGCAAAAGAGCAGGTTCCTCCTACTCTACAGTGCCCTCCTGGG
AAGGTAATGGTGCTTGGAGGAGATGGCCGGGCGCACTGCGTTGTGAAGGAAAGAGTTGAGATCCCCTTTGGCAGCAGCCT
TGATGCCCCAAATGCAAGCTACGGCTTAGGTTGA----------------------------------------------
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>chr2A_1_TraesCS2A01G266200
CTCGGGTATGGTTTTGCTTCCGCGAGAGGCACGGCGTCGTGCCTCCCGAAAATGAAAAAATGTATG----TTTTCCTTTT
TTTCTTCTATGAGAGGCACATTTTTGCTTC-CGTGAGAGGCGCGGCCATGCCTCTTGGAAACGAGAAAACATGTTTTCTC
CTCTTTTCTTTTG------TGAGAGGCACCGTTTTGCTTTCACGAGAGGCACGGTT--G---TGCCTTTCAGAAACGAAA
AAACACATTTTTCT----------------------TTTTTTCTTCATTGACAGGCATGGTTTTGCTTTCTCGAGAGGTA
CGGATTTGCTTCGTGAGATGCATGGTCGTGCCTTTTTGAAACGGCTTCCGGAAAGGAAAAAAAGCATGCTTCCGGTTCGG
TTTTATCGTCCG-TTTTTTG-TGAATTTTTTTCGTCAAAACCTACCAACATTGTATTTAGTTTTGAAGATCTCGACGTGA
GGAATCCAACGATGAAAATGGTTCGAGATTTAGACGCACACTTTAAGAGATAAAACGTTTTGAATAAACAGATATATG--
AAAAAGG---AAAACTCACATGTTACGGCAAGTGGCGCACATGCAGCG-CGCCCTTGTCATAACTTGAGAAGGTGGGAGT
GATTTTTGAAAGAAATACTCCTTAATTAGTGATTTCGGTTCCTTGAAAAAAAAATAGTGATTTCGGGGTACC-CGCTATG
TGGATAGGGAGCGACCTAGGCGCCATATAGGGATTGCCCATGAGAAGGCCTAGCCCATGAGAACTTCAGTACCTGATCTG
GGCCACCCAGTTGAGCATAACAAGGCCCAAGGCGAGTCAGGTAGTTCGAGAGAACAAAAGACAAAATTCTTCGGATACGC
CTCCGTCAGTCTCTCTCGTAGCCACGAACACAAGACTCTTGTCTCAAAAAAAAACGAACACAAGACTCGCCGCGAAGTGC
AAGATTGCAGCTTCCACTGCTCGCCGCCAGCAGCGGGTTGGGGGGGTTAGCCAGGGTTCTGCACCCCTCGCACCGCCAGC
GAAAGCCATGGAAGGGGAGGAGGAGATCGGCCTCGTCCTCGCCCGCGCCTCCGACCTTCGCTCCAGGATCTCCGCCTGCG
CTGCCGCCGCACGGCCACCGCCGCGGCTGGGTGCCGGGGAGGAGGACGACGGCGGAGAGGAGGAGGAAGAGGAGGTGGAG
GTGGAGAGCCTGGTAGGCATCAACGACGCGCTCGAGTCGCTCGAGCGGCAGCTCGCCTCCCTGCAGGTCCGGTTCCTATT
CCTGGTTGGTCATTCCATAAAGATGGTTTTTTTA-----------------------------------------TTGTT
GCTCTGCTAGCCTGCTGTTGTGCCTATAGTTATTGTTTTGTGCCACGAGCTGGAGTTGATATGATCATATGGTAGGTTTG
GGGTTCAATTACTGCATTTTTGTTCAACGTCTTACTGTATTTTCGTGAGGAACCAAATCTACGCTTGCTTAGCATGATGT
TACAGACAGAGGAAAAGATTGATAGCCC----------------------------------------------------
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----------------------------------TAATTAGTTGTTCATTGCCTGGTGGCTGCATCCAATTCC-AGCCTC
ATTTGGC-------ATTGGACTAGAGC-AAAAAGGGGTAGTGTAAGATGGATTCTGTGATTC--TCAGGAACAGGATTGC
TGGTTAACTAA---------------------------------------------------------------------
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-----------TTGTGGGTAAGGTACAGATTGTATTAAAACGCATTTTGCGACAAGAAATAGGTAGAGATTACTGAGTGA
ACAC-AAATGAAAAATGTCAAATGTATGTTACACTGCGTGGTTTACAAAGAGAGATAATTTTCACTTTGCTTACTGTAGC
TTATGGGAAGTATCAGTGGCCAGCACATCTGCGCATTCCTTGTA-GCACAAGCTCGCATGCTTTTCTTCTGTTTTTTGTG
AAAAAAACTGGTATTCCATCATATGGAAATTTGCCTATGC--------GTTTCTTCTTGCATGGAATATCAACTGTTAAG
AACTGTAT--GGAATTTTCCTATGTTAGCACAAAAAGGAAGGTCATTCTGCTAAGAGACACAATCATCCATTGAGATGAA
AATTTCTGCTTCGTGCTCACTAAACTGTAAAATGTTGCCGAGTTTCTGACCTTATTGTACAAAATGCTTAGTTTAAGATA
ATGACATAAACACATTTACGCACAATAACCC--AAAGGGTATCAAACGTGCGAAGTACTTACATTACTACTGCTATATGT
GAGCCCATTGGATGACACTTGCCTCAAGAAATTAGTACACCCTTGGATCCATATTAATTATCGTTGGTTTAGTACAACTT
GTACTAAATCAGCAACAATTAATATGGATTGGAGGGAGTATTTTCTTTTGGACATCAGTAACTGTACCAGGCATATGGTG
TTCTTAGCTTGATACTCCCTCCGTAAAGAAATATAAGAGCATCTAGATCACAAAAGTAGTGATCTAAACGCTCTTATATT
TCCTTACGGAGGGAGTACCATTTTGTGCACAAAGCTTACTAACTCCGTCCCGGTTTATTGGGCCCCTAAGTATTTTGAGC
CAGACTTTGACCATCTGTATGACAAATAAAATATAAAGTATATGCTACAAAAGGCACATTGTTGGATTTGTATTTGAAAG
AGTTTTCCGATGATATAATTTTTGTAACATATAGTTTATATTTTATTAGTTAAATTCATAGGTTATA--TTAACCCAAAA
TAAGAGGGGGCCCAATAACCCCGGACGGAGGGAGTACATGTTTCTGTTTTGGAAAATAAGTAGCTTACCACCTTATTGCC
ACTGCCAGGACCTCCAACACCAACAAAGATATGAACGAGAAACTGTCCTGAGCCAGATTGATCGGAGTCGAACATCTCTC
CTTAACAAGCTGAAAGAATACAAGGGAGAGGACTGTGAAGCAATCCATGAGGCTGCTGCATTTGCTGGTGAAAAAATCGA
AAATGATGATGGTCTCATCCTACCTCCTTACTCGGGCCATGTCACCAATTCATTTGTGCTCGATGATCTCTATCCTGCAA
ACTACGTGTCCAAGCCCAAGTGCCTGCACAACGGACTGCGTTCTGATGGAATGACTGAAGATAGCACAAGGACGAACAGG
ACGCAAAACAGAATCCCTGGCACATCAAGCCGTAATTCATCAGGAGGGATCAGATCTTTGATCGGATGGATGGCTAAAAC
AGCGGTCATGATTGTGGGCGCCATATCAATCATGAAGGCTGCTGGCTACGAGCCCACAATAGGGAGGAGCGGCATAAAAC
TGGACATTGCAGGTCTGTTGGGTAAAGAGGCGGCTGGTGCAAAAGAGCAGGTTCCTCCTACTCTACAGTGCCCTCCTGGG
AAGGTAATGGTGCTTGGAGGAGATGGCCGGGCGCACTGCGTTGTGAAGGAAAGAGTTGAGATCCCCTTTGGCAGCAGCCT
TGATGCCCCAAATGCAAGCTACGGCTTAGGTTGAATCCGTAACCGGGCCGTGTGAATATTAGGCTCTGTTAGCTGGTCC-
-TCTTGGTGTTGTGTAGGAACTGCGGCCGCGAGTTGTTTCTTGTATAATGCTCTCTACTTGGATATTTCCTACGTATTTC
CCTC--TTTAGCCCTGAATGTTGAGTGGCTTATGTATGATGCCGCTGTTAAACCACTTGTCGTTCATCGTCGTCATTATG
GCGGATTCATTAGTGTTTATGTTGCCTAATTGATAGCAATA--TAACAATGATTCCGTTCATATGCAGGCGGACACACAA
CCTGTTGGGGCCCTAGGTTTTTTGCTCTGTCCATGTTGTCTCAATTGTTGAGCAGAGTCTGTTGCCGAGCAGTGAAGGCA
TTTCCTGTACTTTTATGCCCTGATGAATGAATAGCTTTACATGTAATCTGATTGAGAAGAGAGATGGGCTGTGATGCAGG
CTTGCTGTGCAGCAGGAATCTGAACCCAGCGCATGCATACGGATACGGGGATGTTTCAATTCAAAGCAGGGAATGCAGTT
TTGTTTGGTTGCTGTATGTATGTATTCCTGTTGCGGGTACTAATTGGCATAGGCTTGCCGTATGAATGAAGGAAGCAAAG
AAACTGCGTGCGAGCTACTGTACTGTATGAAGCTGCGTGCATGCATTTTGCACGTGATCACCGTCTTGCCAGTGCGTGTT
TTGGCTTTCTGCCATGCGTCTGAATGTAGTTCATGCTTCACTGCACTGTCTCTAGTTAAGTTATACAACTACATACCTGA
AATCTCGATTTTCACTTGGAGTTGCCTTGTCCTTGGGATTACCAATTTCA------------------------------
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-------------------------------------------------------------GTTAAAAAGTGCAATCTAC
AAGTAGAAGAAATGAATAGGAGAGATGGCTGGCGAGTAGCAGGTGCAGAGTCTGTTG-------GCCGCGTCCTAGCTTG
CGCGATCTGCACGGGTGATGGAGACGTTGACCTCCAAGCGTTCCAAAGACTTTACTCCTCTACTAGCGGTTGGGGCGCGC
CACGGCGCGCCGCCTGAT
>chr2B_5
----GGCATAGTTTTGCTTCCGCGAGAGGCATG--GTCGTGCCTCTCGAAAATGGAAAAAACGCATTTTCTC-TTTTTTC
TTTCTTTCGTGAGAGGCATGGATTTGCTTCACGCGAGAGGCGTGGTTGTGCCTCTCGGAAACTAAAAAACACGTTTTCTT
TTTTTTTTC--TG------TGAGAGGCACGGTTTTGCTTCCGCTAGAGGCACGGTTTTG---TGCCTGTCGGAAACTAAA
AAACACGTTTTCTT----------------------TTTTTT-TTCTGTGAGAGGCACGGTTTTGCTTCCGCTAGAGGCA
CGTCT----------------------GTGCCTCTTGGAAACAACTTCCGAAAAGGGGGAAAA-CATGCTCTTGGTTCGT
TTTTTTCATCCATTTTTTTG-TGAAAAGATTTCGTCAAAATCTATCAACATGTGATCTAGTTTTGAAGATCTCAACGCGA
GGAATCCAACGGTGTAAACAATTCAAGATTTGGGCGGACG-TTTAAGAGATAAAACGTTTTGAATAAACAGATCTACAAA
AAAAAGG---AAAACTCCCAGGTTGCGACAAGTGGCACACATGCAGCGCACCACTTGTCACAACCTGAAGAGGGG-GAGT
GATCTTAGGAAGGAGTACCCCTCAATTAGTGATTTC--------------------------------------------
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>chr2B_5
----GGCATAGTTTTGCTTCCGCGAGAGGCATG--GTCGTGCCTCTCGAAAATGGAAAAAACGCATTTTCTCTTTTTTTC
TTTCTTTCGTGAGAGGCATGGATTTGCTTCGCGCGAGAGGCGTGGTTGTGCCTCTCGGAAACTAAAAAACACG------T
TTTTTTTCC--TG------TGAGAGGCACGGTTTTGCTTCCGCTAGAGGCACGGTTTTG---TGCCTCTCGGAAACTAAA
AAACACATT---TT----------------------TTTTTC-TTCTGTGAGAGGCACGGTTTTGCTTCCGCTAGAGGCA
CGTCT----------------------GTGCCTCTTGGAAACAACTTCCGAAAAGGGGGAAAA-CATGCTCTTGGTTCGT
TTTTTTCATCCATTTTTTCG-TGAAAAGATTTCGTCAAAATCTATCAACATGTGATCTAGTTTTGAAGATCTCAACGCGA
GGAATCCAACGGTGTAAACAATTCAAGATTTGGACGGACG-TTTAAGAGATAAAACGTTTTGAATAAACAGATCTACAAA
AAAAAGG---AAAACTCCCAGGTTGCGACAAGTGGCACACATGCAGCGCACCACTTGTCACAACCTGAAGAGGGG-GAGT
GCTCTTAGGAAGGAGTACCCCTCAATTAGTGATTTC--------------------------------------------
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>chr4B_8
-------ATGTTTTTGCTGCCGTGAGAGGCACG--ACCATGCCTCTCGGAAATGGAAAAAAATGCGTCT-TCTCTTTTTC
CCCCTTCCGTGATAGGTACGATTTTGCTTT-CGCGAGAGGCACGACTGTGCCTCTCGGAAATGAAAAAAAACTTATTTGC
TTTTTTTTCATTTTCTCCATGAGAGGCAGGTTTTTGCTTCCGCGAGAGGCATGATTTTGCCGTGCCTCTCGGAAACAAAA
AAAACATGTTTTCTCTTTTTTTTCATGAAGGCACGGTTTTGC-TTTTGTGAGAGGCATGGATTTGCTTCCGCGAGAGGCA
CGGCT----------------------ATGCCTCTTGGAAACAACTTCCGAAAAGGGAAAAAA-CATGCTGGCGGTTCGA
TTTTCTCGCTCAGTTTTTTCATGAATTTTTTTCGGCAAAATATATCAACATGGAATCTAATTTTGAAGACCTCGACATGA
-GGATCCGACGGTGAAGATGGTTCGAGATTTGGACGCACGATTTAAGAGATAAAACGTTTTGAATAAACAGATTTATG--
AAAAAAGGAAAAAACTCACAGGTTGTGACAAGTGGCGCACATGCAGCACCCCACTGGTCACAACCTGAGAAGGGG-GAGT
GATCTCTGGAAGGAGTGCTTCTCAATTAGTGATTTC--------------------------------------------
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>chr2B_646
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---------------------------------------------------AATTAGTGATTTCGGGGGTACACGCTATG
TGGATAGGGAGCGACCTAGGCGCCATATAGGGATTGCCCATGAGAAGGCCTAGCCCATGAGAACTTCAGTACCTGATCTG
GGCCACCCAGTTGAGCACAACAAGGCCCAAGTCGAGTCTGGTAGTTCGAGAGAAGAAAAGACAAAAATCTTCGGATACGC
CTCCGTCAGTCCCTCTCGCAGCC------------------------------ACGAACACAAGACCCGCCGCGAAGTGC
AAGATTGCAGCTTCCACTGCTCGCCGCCAGCAGCGGGTTGGGGGT-TTAGCCAGGGTTCTGCATCTCCCGCACCGCTAGC
GAAGGCCATGGAAGGGGAGGAGGAGATAGGCCTCGTCCTCGCCCGCGCCTCCGACCTCCGCTCCAGGATCTCCGCCTGCG
CTGCCGCCGCACGGCCACCGCCGCGGCTGGGCGCCGAGGAGGAGGACGACGGCGGAGAGGAGGAAGAAGAGGGGGTGGAG
GTGGAGAGCCTGGCAGGCATCAACGACGCGCTTGAGTCGCTCGAGCGGCAGCTCGCCTCCCTGCAGGTCCGGTTCGTATT
CCTGGTTGGTCATTCGATAAAGATGGGTTTTTTA-----------------------------------------TT---
--------------------------------------TGTGCCACGAGCTGGAGTTGATATGGTCATATGGTAGGTTTG
GGGTTCAATTACTGCATTTTTGTTCAACGTCCTACTGTATTTTCGTGAGGAACCAATTCTAGGCTTGCTTAGCATGT---
---------AGGAAAAGATTGATAGCCCTAACAGCGCGTTTGGCAAAATTTGGGAAGACGAATGGGTTAATGTAGGAAGT
TGTATTGAGATTAGACATGGGATGAGTCGTCTTATTTCCAATCCCCTGTTTGGCGCATGATGGGAATTATGTGTGAGAGT
TTGAGAAGAAACTGTATTCCCGTGTTTGGTTCGTGGGAATAGACAAGGGAAATTAACGTAAGTTATGATGAAGGGTTAAT
ATTGACTCACTAAAACAATTCCCTTTCAACTCCCACCCCCTCCCCTGTTAATAAAACGATGGGAGTTGGAGTCTCAAGTT
CCATGACTATTCCTTTATGAACTCCCAATCCCCCTAACCAAACGATAGATTTGAAGTCTCGTATCCCTTCACTTCCCATT
CCCTAGCTCTAATTACCCCCAGCCAAACACGCTGTAATTAGTTGTTCATTGCCTGGTGCCTGCATCCAATTCC-AGCCTC
ATTTGGT-------ATTGGACTAGAGCAAAAAAGGCGTAGTGTAAGATGGATTCTGTGGTTCCGTCTGTAACAGGATTGC
TGGTTAACTAA---------------------------------------------------------------------
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-----------TTGTGGGTAAGGTACAGATTGTATTAAAACACATTTTGCGGCAGAAAATAGGTGGAGATTGCTGAGTGA
ACAC-AAATGAAAAATATCAAAGGTATGTTACACTGCATGGCTTACAAAGAGTGATAATTGTCACTTTGCTTA-----GC
TTATGGGAAGTATCAGTGGTCAGCACATCTGCGCATTCCTTTTTAGCACAAGCTTGCATGCTTTTCTTCTTTTTGTAGTG
G-AGAAGCT-GTATTCCATCATATGGAAATTTGCTTATGTTTCCCTGAATTTCTTCTTGCATGGAATATCAACTGTTAAG
AACTGTATATGGAATTTTCCTATCTTAGCAGAAAAAG-AAGGTCATTTTTCTAAGAGAGAAAATCATCCATTGAGATGAA
AATTTCTGCTTCGTGGTAACTAAACTGTAAAACGTTGCTGAGTTTCTGACTTTATTGTACAAAATGCGTACTTTAAGATA
ATAGCATAAACACATTTAATCACAATAACCCCCAAAGGGTATCAAACTTGTGAAGTACCTACATTACTACTGCTATATGT
GAACCAATTGGATGACGCTTTCCTCAAGAAATTAGTTTTTC---------------------------------------
----------------------------------------TTTTCTTTAGGATACGAGTAACTGTGCCAGCCATATGGT-
-TCTTAGCTTGA--------------------------------------------------------------------
---------------TACCATTTTGTGCACAAAGTTTATACTGCTGT---------------------------------
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----------------------------------TACATGTTTCTGTTTTGGAAA-TAAGTAGCTTACCTCTGTAGTGCC
ACTGCCAGGACCTCCAACACCAACAAAAATATGAACGAGAAACCGTCCTGAGCCAGATTGACCGCAGTCGAACATCTCTC
CTTAACAAGCTGAAAGAATACAAGGGAGAGGACTGTGAGGCAATCCACGAGGCTGCTGCTTTTGCTGGTGAAAAAATTGA
AAATGATGATGGTCTCATCCTACCTCCTTACTCGGGCCATGTCACCAATTCATTTGTGCTCGATGATCTCTATCCTGCAA
ACTATGTGTCCAAGTCCAAGTGCTTGCACAACGGACTGTGTGCTAATGGAATTGCTGAAGATGTCACAAGGACGAACGGG
ACGCAAAACAGAATCCCTAGCACGCCGAGCCGTAATTCATCAGGAGGGATCAGATCTTTGATCGGATGGATGGCTAAAAC
AGCGGTCATGATTGTGGGCGCAGTATCAATCATGAAGGCTGCTGGCTACGAGCCCACAATAGGGAGGAGTGGCATAAAAC
TGGACATTGCAGGTCTGTTGGGTAAAGAGGCGGCTGGTGCAAAAGAGCAGGTTCCTCCTACTCTACAGTGCCCTCCTGGG
AAGGTAATGTTGCTCGGAGGAGATGGCAGGGCGCACTGTGTTGTGAAGGAAAGAGTGGAGATCCCCTTCGGCAGCAGCCT
TGACGCCCCAAATGCAAGCTACGGCTTAGGTTGAATCCGGAACCGGGTCGTGTGAATATTAGGCTCTGTTAGCTTGTCC-
-T--TGGTGTTGTGTAGGAAGTGCGGCCACGAGTTGTTTCTTGTATAATGCTCTCTACTTGGATATTTCCTAGGTATTTC
CCTCTGTTTAGCCCTGAACGTTGACCGGCTTATGCATCATGCCGCTGTTAAACCACTCCTTGTTCATCTTCGTCAT---G
GCGGATCCATGAGTGTTTATGTTGCCTAATTGATAGCAATATATATCAATGATTGCGTTGATATGCAGGTGGACACACAA
CCTG-TGGGGGCCTAGGTTTTT-GCTCTGTCCATGTTGTCTCAATTGTTGAGCAGAGTCTGTTGCCGATCAGCTTCTGCT
CAACAATTGAGACAACATGGACAGAGCGGCAC------------------------------------------------
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----------------------------------------------------------------------------TGTT
TTGGCTTTCTGCCATGCGTCTGAATGTA-TTCATGCTTCACTGCACTGTCTCTAGTTAAGTTATAC----------CTGA
AATCTCGAAATTCACTTGGAGTTGCCTTGTTCTTGGGATTACTAATTTCAGTTAAAAAGTGCAGTCCAGAGTTTCGCCTC
CTGTTGTATATCCTCGATAAGCTTGTTGTAGGAGGGTGCAGCGTTGTCAAAGAGAGCTGCGCTGCGATGTTTCCAAAGTG
CCCACGAGGTGAGGATGATGATGGAGTTAGTCGTTGCCATCCACCAGTCGAAGAAGCCGAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGCGGCACCATGCCATGATGTCGTG
CCGACGAGAAGGTGGTGTAGTGTCTTGTTGTCTTGGCTGCACAGCTTGCAAATGGGGTCGTGAGGATCATTCTTGTAACA
TAAGATGTAAACTCTGAGGCTGAGCATCCTCCCTCCCCCGCTGCTCAATTAGCGCTTAGGCTCGCCATCTCATGTGTACG
ATGCCTAAGACGCTCACCCTTGTACTCTCTTCCAACCTATCAATGAAATGATATGAAAAAAGTTAAAAAGTGCAGTCTAC
ATGGAGAAGAAATGGATGTGAGAGATGGCTGGCGAGTAGCAGGTGCAGAGTCTGTTCGCTGTTCGCCGCAGCCTAGCTTG
CGCGATCTGCACGGGTGATGGAGACGTTGACCTCCAAGCGTTCCAAAGACTTTACTCCTCTA------------------
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>chr2D_887
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-----------------------------------------------------ACGAACACAAGACCCGCCGCTAAGTGC
AAGATTGCAGCTTCCACTGCTCGCCGCCAGCAGCGGGTTGGGGGT-TTAGCCAGGGTTCTGCACCCCCCGCACCGCTAGC
GAAAGCCATGGAAGGGGAGGAGGAGATAGGCCTCGTCCTCGCCCGCGCCTCCGACCTTCGCTCCAGGATCTCCGCCTGCG
CTGCCGCCGCACGGCCCCCGCTGCGGCTGGGCGCCGGGGAGGAGGACGACGGCGGAGAGGAGGCGGAAGAGGAGGTGGAG
ATGGAGAGCCTGGTAGGCATCAACGACGCGCTCGAGTCGCTCGAGCGGCAGCTCGCCTCCCTGCAGGTCCGGTTCCTATT
CCTGGTTGGTCATTCGATAAAGATGGGTTTTTTGTTGTTGCTCTGCTAGCCTCCTGTTGTGTCTATAGCTATCGTTT---
--------------------------------------TGTGCCACGAGCTGGAGTTGATATGGTCATGTGGTAGGTTTG
GGGTTCAATTACTGCATTTTTGTTCAACGTCTTACTGTATTTTCGTGAGGAACCAAATCTAGGCTTGCTTGGCATGATGT
TACAGACAGA--AAAAGATTGATAGACC----------------------------------------------------
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----------------------------------TAATTATTTGTTCATTGCCTGGTAGCTGCATCCAGTTACAAGCCTC
ATTTGGTAATCGGTATTGGACTAGGGT-AAAAAGGGGTAGTGTAAAATGGATTCTGTGGTTCCGTCAGGAACATGATTGC
TGGTTAACTAACGAACCTTGCTACACATATGACATTTTTGGTACGATTCTTGTCCGACACTGCTAATCAGACTGTACATA
CTTAGGATTGAAGCATAGTACACCGCTAGATTACTCGCCCTATGGGAATCGGACTAACAAGCGCTGGGCGCGAAGTAGTT
CTGTTTACTAATTGTGGGTAAGGTACAGATTGTATTAAAACACATTTTGCGACCGACAATAGGTAGAGATTGCTGAGTGA
ACAGAAAATGAAAAATATCAAATGTATGTTTCACTGCGTGGTTTACAAAGAGAGATAATTTTCACTTTGCGTA-----GC
TTATGGGAAGTATCAGTGGCCAGCACATCCGCGCATTCCTTGTT-GCACAAGCTCGCATTCTTTTCTTCTTTTTGTAGTG
G-AAAAGCTGCTATTCCTTCATATGGAAATTCACCTATGTTTCCTTGAGTTTCTTCTTGCATGGAATATCAATTGTTAAG
AACTGTAT--GGAATTTGCCTATGTTAGCACAAAAAGGAATGTCGTTTTGCTAGGAGACACAATCATCAATTGAGACGAA
AGTTTATACTTCATGGTCACTAAACTGTAAA-TGTTGCTGACTTTCTGACTTTATTGTACAAGATGCTTACTTTAAGATA
ATGGCATAAACACATTTAATCACAATAACT--CAAAGGGTATCAAACGTGCGAAGTACTTACATTACTACTGCTATATGT
GCGCCCATA-GATGACACTTGCCTCAAGAAATTAGTACTCCCTCCGATCCATATTAATTGTCGTTGATTTAGTACAACTT
GTACTAAATCAGCAAAAATTAATATGGATTGGAGGGAGTATTTTCTTTTGGATACCAGTAACTGTACCAGGCATATGGTG
TTCTTAGCTTGATAC-----------------------------------------------------------------
------------------CATTTTGTGCACAAAGCGTAGTAACTCCGTCCGGGTTTATTGGGCCCCTTTGTATTTTGAGC
CAGAATTGGACCATCTATATGACAAATAAAATATAAAGTATATGCTACAAAAGGCACATTGTTGGATTTGTATTTGAAAG
AGTTTTC-GATGATCTAATGTTTGTAACATATAGTTTATATTTTATTAGTTCAATTCATAGGTCAAATTTTAACCCAAAA
TAAGAGGGA-CCTAATAAACCCGGACGGAGGGAGTACATGTTTCTGTTTTGGAAAATAAGCAGCTTACCACCTTATTGCC
ATGT-CAGGACCTCCAACACCAACAAAGATATGAACGAGAAACCGTCCTGAGCCAGATTGATCGCAGTCGAACATCTCTC
CTTAACAAGCTGAAAGAATACAAGGGAGAGGACTGTGAAGCAATCCACGAGGCTGCTGCTTTTGCTGGTGAAAAAATCGA
AAATGATGATGGTCTCATCCTACCTCCTTACTCGGGCCATGTCACCAATTCATTTGTGCTCGATGATCTCTATCCTGCAA
ACTACGTGTCCAAGCCCAAGTGCCTGCACAATGGACTGCGTTCTAATGGAATGACTGAAGATGGTACAGGGACAAACGGG
GTGCAAAACAGAATTCCTATCATGTCGAGCCGTAATTCAGCAGGAGGGATCAGATCTTTGATTGGATGGTTGGCTAAAAC
AGCGGTCATGATTGTGGGCGCCGTATCAATCATGAAGGCTGCTGGCTACGAGCCCACAATAGGGAGGAGCGGCATAAAAC
TGGACATTGCAGGTCTGTTGGGTAAAGAGGCGGCTGGTGCAAAAGAGCAGGTTCCTCCTACTCTACAGTGCCCTCCTGGG
AAGGTAATGGTGCTTGGTGGAGATGGCCGGGCGCACTGCGTTGTGAAGGAAAGAGTTGAGATCCCCTTCGGCAGCAGCCT
TGATGCCCCAAATGCAAGCTACGGCTTAGGTTGAATCCGGAACCGGGCAGTGTGAATATTAGGTTCTGTTAGCTGGTCCT
CT--TGGTGTTGTGTAGGAACCGCGTCCACGATTTGTTTCTTGTATAATGCTCTCTACTTGGATATTTACTATGTATTTC
C--CTGTTTAGCCCTGAATGTTGAGCGGCTTATGTATGATGCCGCTGTTAAACCACTTGTCGTTCATCGTCGTCAT---G
GCGGATCCATGAGTGTGTATGTTGCCTGATTGATAGCAATA--TATCAATGATTGCGTCCATATGCAGGCGGACACACAA
CCTGTTGGGGCCCTAGGTTTTT-GCTCTGTGCATGTTGTCTCAATTGTTGAGCAGAGTCTGTTGCCGACCAGTGAAGGCA
TTTCCCGTACTTTTATACCCTGATGTATGAATAGCTTTACATGTAATCTGATTGAGAAGAGAGATGGGCTGGCATGCAGG
CTTGCTGTGCAGCAGGAATCTGAACCCAGCGCATACATAC-GATACGGGGATGT--------------------------
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------------------
>SNPs
SSSS--S--------------------------SS----------S--------S-----SS-SS------S--SS---S
-------SS----------SS------------S------------SS-------S--------S------S--------
S-S-----SS-------------------S---------S-S-------------------------S--S-----S---
------------------------------------------S---SS---S----------------S-S-------S-
---S-SSSSSSSSSSSSSSSSSSSSSS------S--S-----SS------S-----S------S------SS-------S
----S------S----------------------------S---S------S-S--S-----------------------
-----------S-------------------S-------SS--------------------------------S------
--------------------S---S--S----------------------S-S-------S---S--------S-S----
---S----S---S-S-------S-------------SSSSSSSSSSSSSSS--S--------------SSS---------
--------------------------------------------------------------------------------
-----------------S-------------S------S---------------S-----------S-------------
-----------S------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------------
--------------------------------------------SS---------------------S--------S---
---------------------------S----------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------S--------------------------------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S----------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------------SS---------------S--------
----------------S--------------------------------------------------------SSSSS--
-------------------------------------------S--------------------------S---S-S---
SS----S--------------------------------S----------------------------------------
-----------------------------------------------S--------------------------------
---------------S----------------------S-----------S-------------------S---------
---S--------------SS------------------------------------------------------------
--------------------------------------S----SS--------------S------S-------------
---------------S------------------------------------S-S-------------------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------S-----------S----------------SS-----------
----S--S--------S---------------------------------------------------------------
-------S------S----S-------------------------------S-----------S-S--------------
--------SS--S-----S-------------------------------------------------------------
-------------------------------------------S--------------------S---------------
-----------------------------------------------S-----------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------S--------------S--
------------------S----S--S-----------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------------------------------S----------------------------------------
--SS------------------------S-------------------------------------------S-------
-------------------------S--------------------------------------------------SSS-
------S---S----------------------------------S--------S-------------------------
----------------------S---------------------------------------------S-----------
-----S----------S--------S---------------------------------------------SS-------
----------------------------------S-----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
----------------------------S-------------------------------------SSSSSSSSSS----
--------SS--------------------S-----------S-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------S-----
-S-S----------S--SS-------------------------------------S------------SS---------
--------------------------------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_492
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGACGTGA
GGAATCCAACGA--------------------------------------------------------------------
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>reverse_1362
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-CTCTGCTAGCCTGCTGTTGT-----------------------------------------------------------
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>forward_1068
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--------TGGAAGGGGAGGAGGAGATC----------------------------------------------------
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------------------
>reverse_3663
--------------------------------------------------------------------------------
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--------------------------------------------------------------AGCACAAGGACGAACAGG
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1381
--------------------------------------------------------------------------------
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-CTCTGCTAGCCTGCTGTTGT-----------------------------------------------------------
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>reverse_3678
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-----------------------------------------------------------------------------AGG
ACGCAAAACAGAATCCCT--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1386
--------------------------------------------------------------------------------
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------CTAGCCTGCTGTTGTGCCTA------------------------------------------------------
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>reverse_3699
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------------------GGCACATCAAGCCGTAATTCA-----------------------------------------
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>forward_3109
--------------------------------------------------------------------------------
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-------------------------------------------------CCGGTTTATTGGGCCCCTAA-----------
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------------------
>reverse_4704
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TCTTGCCAGTGCGTGTT
TTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
