Multiple sequence alignment - TraesCS2A01G222500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G222500 chr2A 100.000 2715 0 0 1 2715 214236251 214238965 0.000000e+00 5014.0
1 TraesCS2A01G222500 chr2A 93.089 246 16 1 113 357 126471045 126471290 2.570000e-95 359.0
2 TraesCS2A01G222500 chr2D 93.123 1425 73 14 1078 2489 197837530 197838942 0.000000e+00 2065.0
3 TraesCS2A01G222500 chr2D 93.250 637 19 6 356 982 197836473 197837095 0.000000e+00 917.0
4 TraesCS2A01G222500 chr2D 97.222 144 3 1 1307 1450 628827165 628827023 2.700000e-60 243.0
5 TraesCS2A01G222500 chr2D 93.651 63 3 1 40 102 197836388 197836449 2.880000e-15 93.5
6 TraesCS2A01G222500 chr2B 90.774 1409 74 24 893 2281 254621677 254623049 0.000000e+00 1831.0
7 TraesCS2A01G222500 chr2B 89.869 533 12 12 356 866 254620985 254621497 0.000000e+00 647.0
8 TraesCS2A01G222500 chr2B 92.063 252 19 1 113 363 597223175 597223426 1.200000e-93 353.0
9 TraesCS2A01G222500 chr2B 92.632 190 13 1 2527 2715 593663157 593662968 3.440000e-69 272.0
10 TraesCS2A01G222500 chr5A 93.852 244 15 0 113 356 91625789 91625546 4.270000e-98 368.0
11 TraesCS2A01G222500 chr5A 92.800 250 18 0 113 362 681485242 681484993 1.990000e-96 363.0
12 TraesCS2A01G222500 chr4A 92.885 253 16 2 113 364 640208942 640209193 1.540000e-97 366.0
13 TraesCS2A01G222500 chr5B 92.490 253 18 1 113 364 698451427 698451679 7.150000e-96 361.0
14 TraesCS2A01G222500 chr5B 92.742 248 17 1 113 359 153888926 153888679 9.240000e-95 357.0
15 TraesCS2A01G222500 chr6A 93.061 245 17 0 113 357 181910093 181909849 2.570000e-95 359.0
16 TraesCS2A01G222500 chr3B 93.061 245 17 0 113 357 623667339 623667583 2.570000e-95 359.0
17 TraesCS2A01G222500 chr3B 92.899 169 11 1 2548 2715 737438878 737438710 7.510000e-61 244.0
18 TraesCS2A01G222500 chr3D 97.516 161 4 0 1307 1467 93201203 93201363 2.660000e-70 276.0
19 TraesCS2A01G222500 chr3D 91.398 186 16 0 2530 2715 527669351 527669536 3.470000e-64 255.0
20 TraesCS2A01G222500 chr6D 91.534 189 15 1 2528 2715 455636146 455635958 2.680000e-65 259.0
21 TraesCS2A01G222500 chr6D 92.308 169 11 2 2548 2715 447067482 447067315 3.490000e-59 239.0
22 TraesCS2A01G222500 chr4D 89.947 189 18 1 2528 2715 497938177 497937989 2.700000e-60 243.0
23 TraesCS2A01G222500 chr4B 89.947 189 17 2 2527 2715 666619925 666620111 2.700000e-60 243.0
24 TraesCS2A01G222500 chr1B 89.947 189 18 1 2528 2715 409700553 409700365 2.700000e-60 243.0
25 TraesCS2A01G222500 chr3A 88.601 193 15 5 2524 2715 738672795 738672981 7.560000e-56 228.0
26 TraesCS2A01G222500 chr7D 94.776 134 7 0 1327 1460 104961002 104960869 2.740000e-50 209.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G222500 chr2A 214236251 214238965 2714 False 5014.000000 5014 100.000000 1 2715 1 chr2A.!!$F2 2714
1 TraesCS2A01G222500 chr2D 197836388 197838942 2554 False 1025.166667 2065 93.341333 40 2489 3 chr2D.!!$F1 2449
2 TraesCS2A01G222500 chr2B 254620985 254623049 2064 False 1239.000000 1831 90.321500 356 2281 2 chr2B.!!$F2 1925

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 221 0.030369 CGAGGCGCCTACGATAACTT 59.97 55.0 32.97 2.04 43.93 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 2259 0.919981 CTCGCTTCTCATGAACTCGC 59.08 55.0 0.0 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.059603 CTGGGTCGTGTTAATCCCG 57.940 57.895 0.00 0.00 42.54 5.14
19 20 1.078988 TGGGTCGTGTTAATCCCGC 60.079 57.895 0.00 0.00 42.54 6.13
20 21 1.816679 GGGTCGTGTTAATCCCGCC 60.817 63.158 0.00 0.00 0.00 6.13
21 22 1.816679 GGTCGTGTTAATCCCGCCC 60.817 63.158 0.00 0.00 0.00 6.13
22 23 1.816679 GTCGTGTTAATCCCGCCCC 60.817 63.158 0.00 0.00 0.00 5.80
23 24 1.991167 TCGTGTTAATCCCGCCCCT 60.991 57.895 0.00 0.00 0.00 4.79
24 25 1.078001 CGTGTTAATCCCGCCCCTT 60.078 57.895 0.00 0.00 0.00 3.95
25 26 1.093496 CGTGTTAATCCCGCCCCTTC 61.093 60.000 0.00 0.00 0.00 3.46
26 27 0.750546 GTGTTAATCCCGCCCCTTCC 60.751 60.000 0.00 0.00 0.00 3.46
27 28 1.152819 GTTAATCCCGCCCCTTCCC 60.153 63.158 0.00 0.00 0.00 3.97
28 29 2.388610 TTAATCCCGCCCCTTCCCC 61.389 63.158 0.00 0.00 0.00 4.81
37 38 3.798511 CCCTTCCCCCGCTTCCTC 61.799 72.222 0.00 0.00 0.00 3.71
38 39 2.689034 CCTTCCCCCGCTTCCTCT 60.689 66.667 0.00 0.00 0.00 3.69
48 49 2.291930 CCCGCTTCCTCTATCCTATCCT 60.292 54.545 0.00 0.00 0.00 3.24
50 51 4.386986 CCCGCTTCCTCTATCCTATCCTAT 60.387 50.000 0.00 0.00 0.00 2.57
51 52 4.825085 CCGCTTCCTCTATCCTATCCTATC 59.175 50.000 0.00 0.00 0.00 2.08
92 93 3.733684 CGTCATGTGACACGATGTATCCA 60.734 47.826 13.07 0.00 44.99 3.41
93 94 4.371786 GTCATGTGACACGATGTATCCAT 58.628 43.478 8.22 0.00 44.18 3.41
94 95 4.209911 GTCATGTGACACGATGTATCCATG 59.790 45.833 8.22 4.08 44.18 3.66
95 96 2.549926 TGTGACACGATGTATCCATGC 58.450 47.619 0.22 0.00 0.00 4.06
119 120 7.105494 CATGCATGCATAACTGATTCAAATC 57.895 36.000 31.73 0.00 34.91 2.17
122 123 5.690409 GCATGCATAACTGATTCAAATCCTG 59.310 40.000 14.21 0.00 34.50 3.86
123 124 6.460537 GCATGCATAACTGATTCAAATCCTGA 60.461 38.462 14.21 0.00 34.50 3.86
124 125 7.658261 CATGCATAACTGATTCAAATCCTGAT 58.342 34.615 0.00 0.00 34.50 2.90
125 126 7.034685 TGCATAACTGATTCAAATCCTGATG 57.965 36.000 0.48 1.55 34.50 3.07
126 127 5.919141 GCATAACTGATTCAAATCCTGATGC 59.081 40.000 10.53 10.53 34.50 3.91
127 128 6.238953 GCATAACTGATTCAAATCCTGATGCT 60.239 38.462 14.93 0.00 35.56 3.79
129 130 3.875727 ACTGATTCAAATCCTGATGCTCG 59.124 43.478 0.48 0.00 34.50 5.03
130 131 2.615447 TGATTCAAATCCTGATGCTCGC 59.385 45.455 0.48 0.00 34.50 5.03
131 132 2.112380 TTCAAATCCTGATGCTCGCA 57.888 45.000 0.00 0.00 32.78 5.10
132 133 2.336945 TCAAATCCTGATGCTCGCAT 57.663 45.000 3.70 3.70 39.69 4.73
133 134 2.646930 TCAAATCCTGATGCTCGCATT 58.353 42.857 5.79 0.00 36.70 3.56
134 135 3.807553 TCAAATCCTGATGCTCGCATTA 58.192 40.909 5.79 0.89 36.70 1.90
135 136 4.392047 TCAAATCCTGATGCTCGCATTAT 58.608 39.130 5.79 0.00 36.70 1.28
136 137 4.823442 TCAAATCCTGATGCTCGCATTATT 59.177 37.500 5.79 2.29 36.70 1.40
137 138 5.300034 TCAAATCCTGATGCTCGCATTATTT 59.700 36.000 5.79 7.47 36.70 1.40
138 139 5.779529 AATCCTGATGCTCGCATTATTTT 57.220 34.783 5.79 0.00 36.70 1.82
139 140 5.779529 ATCCTGATGCTCGCATTATTTTT 57.220 34.783 5.79 0.00 36.70 1.94
140 141 4.923893 TCCTGATGCTCGCATTATTTTTG 58.076 39.130 5.79 0.00 36.70 2.44
141 142 4.046462 CCTGATGCTCGCATTATTTTTGG 58.954 43.478 5.79 0.00 36.70 3.28
142 143 4.202040 CCTGATGCTCGCATTATTTTTGGA 60.202 41.667 5.79 0.00 36.70 3.53
143 144 5.508489 CCTGATGCTCGCATTATTTTTGGAT 60.508 40.000 5.79 0.00 36.70 3.41
144 145 5.904941 TGATGCTCGCATTATTTTTGGATT 58.095 33.333 5.79 0.00 36.70 3.01
145 146 6.339730 TGATGCTCGCATTATTTTTGGATTT 58.660 32.000 5.79 0.00 36.70 2.17
146 147 7.487484 TGATGCTCGCATTATTTTTGGATTTA 58.513 30.769 5.79 0.00 36.70 1.40
147 148 8.143193 TGATGCTCGCATTATTTTTGGATTTAT 58.857 29.630 5.79 0.00 36.70 1.40
148 149 8.891671 ATGCTCGCATTATTTTTGGATTTATT 57.108 26.923 0.00 0.00 31.82 1.40
149 150 8.715191 TGCTCGCATTATTTTTGGATTTATTT 57.285 26.923 0.00 0.00 0.00 1.40
150 151 9.160496 TGCTCGCATTATTTTTGGATTTATTTT 57.840 25.926 0.00 0.00 0.00 1.82
162 163 8.710835 TTTGGATTTATTTTAGAATTTCCGGC 57.289 30.769 0.00 0.00 0.00 6.13
163 164 6.500041 TGGATTTATTTTAGAATTTCCGGCG 58.500 36.000 0.00 0.00 0.00 6.46
164 165 6.319152 TGGATTTATTTTAGAATTTCCGGCGA 59.681 34.615 9.30 0.00 0.00 5.54
165 166 7.013846 TGGATTTATTTTAGAATTTCCGGCGAT 59.986 33.333 9.30 0.00 0.00 4.58
166 167 7.326063 GGATTTATTTTAGAATTTCCGGCGATG 59.674 37.037 9.30 0.00 0.00 3.84
167 168 3.414549 TTTTAGAATTTCCGGCGATGC 57.585 42.857 9.30 0.00 0.00 3.91
168 169 0.934496 TTAGAATTTCCGGCGATGCG 59.066 50.000 9.30 0.00 0.00 4.73
169 170 0.179094 TAGAATTTCCGGCGATGCGT 60.179 50.000 9.30 0.00 0.00 5.24
170 171 1.024579 AGAATTTCCGGCGATGCGTT 61.025 50.000 9.30 0.00 0.00 4.84
171 172 0.179174 GAATTTCCGGCGATGCGTTT 60.179 50.000 9.30 0.00 0.00 3.60
172 173 0.242555 AATTTCCGGCGATGCGTTTT 59.757 45.000 9.30 0.00 0.00 2.43
173 174 0.179174 ATTTCCGGCGATGCGTTTTC 60.179 50.000 9.30 0.00 0.00 2.29
174 175 1.507974 TTTCCGGCGATGCGTTTTCA 61.508 50.000 9.30 0.00 0.00 2.69
175 176 1.507974 TTCCGGCGATGCGTTTTCAA 61.508 50.000 9.30 0.00 0.00 2.69
176 177 1.136565 CCGGCGATGCGTTTTCAAT 59.863 52.632 9.30 0.00 0.00 2.57
177 178 1.133363 CCGGCGATGCGTTTTCAATG 61.133 55.000 9.30 0.00 0.00 2.82
178 179 1.133363 CGGCGATGCGTTTTCAATGG 61.133 55.000 0.00 0.00 0.00 3.16
179 180 0.801836 GGCGATGCGTTTTCAATGGG 60.802 55.000 0.00 0.00 0.00 4.00
180 181 0.170116 GCGATGCGTTTTCAATGGGA 59.830 50.000 0.00 0.00 0.00 4.37
181 182 1.795162 GCGATGCGTTTTCAATGGGAG 60.795 52.381 0.00 0.00 0.00 4.30
182 183 1.202177 CGATGCGTTTTCAATGGGAGG 60.202 52.381 0.00 0.00 0.00 4.30
183 184 2.091541 GATGCGTTTTCAATGGGAGGA 58.908 47.619 0.00 0.00 0.00 3.71
184 185 1.533625 TGCGTTTTCAATGGGAGGAG 58.466 50.000 0.00 0.00 0.00 3.69
185 186 1.073125 TGCGTTTTCAATGGGAGGAGA 59.927 47.619 0.00 0.00 0.00 3.71
186 187 1.468914 GCGTTTTCAATGGGAGGAGAC 59.531 52.381 0.00 0.00 0.00 3.36
187 188 1.732259 CGTTTTCAATGGGAGGAGACG 59.268 52.381 0.00 0.00 0.00 4.18
188 189 2.779506 GTTTTCAATGGGAGGAGACGT 58.220 47.619 0.00 0.00 0.00 4.34
189 190 3.146847 GTTTTCAATGGGAGGAGACGTT 58.853 45.455 0.00 0.00 0.00 3.99
190 191 2.762535 TTCAATGGGAGGAGACGTTC 57.237 50.000 0.00 0.00 0.00 3.95
191 192 1.938585 TCAATGGGAGGAGACGTTCT 58.061 50.000 0.00 0.00 0.00 3.01
192 193 1.825474 TCAATGGGAGGAGACGTTCTC 59.175 52.381 0.00 0.00 42.66 2.87
193 194 1.550524 CAATGGGAGGAGACGTTCTCA 59.449 52.381 14.26 4.00 45.12 3.27
194 195 2.166907 ATGGGAGGAGACGTTCTCAT 57.833 50.000 14.26 6.04 45.12 2.90
198 199 2.461897 GAGGAGACGTTCTCATCGAC 57.538 55.000 14.26 0.89 43.14 4.20
199 200 0.727970 AGGAGACGTTCTCATCGACG 59.272 55.000 14.26 0.00 45.12 5.12
200 201 0.725686 GGAGACGTTCTCATCGACGA 59.274 55.000 0.00 0.00 45.12 4.20
201 202 1.529418 GGAGACGTTCTCATCGACGAC 60.529 57.143 0.00 0.00 45.12 4.34
202 203 0.094901 AGACGTTCTCATCGACGACG 59.905 55.000 0.00 0.00 41.53 5.12
203 204 4.101810 GAGACGTTCTCATCGACGACGA 62.102 54.545 13.07 13.07 42.90 4.20
204 205 5.856776 GAGACGTTCTCATCGACGACGAG 62.857 56.522 14.49 14.49 42.90 4.18
213 214 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
215 216 3.950254 CGACGAGGCGCCTACGAT 61.950 66.667 37.37 26.68 43.93 3.73
216 217 2.601398 CGACGAGGCGCCTACGATA 61.601 63.158 37.37 0.00 43.93 2.92
217 218 1.650912 GACGAGGCGCCTACGATAA 59.349 57.895 37.37 0.00 43.93 1.75
218 219 0.659711 GACGAGGCGCCTACGATAAC 60.660 60.000 37.37 25.38 43.93 1.89
219 220 1.099879 ACGAGGCGCCTACGATAACT 61.100 55.000 37.37 21.65 43.93 2.24
220 221 0.030369 CGAGGCGCCTACGATAACTT 59.970 55.000 32.97 2.04 43.93 2.66
221 222 1.768510 GAGGCGCCTACGATAACTTC 58.231 55.000 32.97 9.38 43.93 3.01
236 237 7.242257 CGATAACTTCGTAAATCTCGAGATG 57.758 40.000 27.93 15.49 43.01 2.90
237 238 7.070183 CGATAACTTCGTAAATCTCGAGATGA 58.930 38.462 27.93 17.52 43.01 2.92
238 239 7.746916 CGATAACTTCGTAAATCTCGAGATGAT 59.253 37.037 27.93 21.01 43.01 2.45
241 242 8.735303 AACTTCGTAAATCTCGAGATGATATG 57.265 34.615 27.93 24.73 38.52 1.78
242 243 6.804295 ACTTCGTAAATCTCGAGATGATATGC 59.196 38.462 27.93 16.09 38.52 3.14
243 244 5.641709 TCGTAAATCTCGAGATGATATGCC 58.358 41.667 27.93 11.58 34.49 4.40
244 245 4.497251 CGTAAATCTCGAGATGATATGCCG 59.503 45.833 27.93 17.90 34.49 5.69
245 246 3.516981 AATCTCGAGATGATATGCCGG 57.483 47.619 27.93 0.00 34.49 6.13
246 247 0.528017 TCTCGAGATGATATGCCGGC 59.472 55.000 22.73 22.73 0.00 6.13
247 248 0.529833 CTCGAGATGATATGCCGGCT 59.470 55.000 29.70 15.76 0.00 5.52
248 249 0.528017 TCGAGATGATATGCCGGCTC 59.472 55.000 29.70 17.89 0.00 4.70
249 250 0.244721 CGAGATGATATGCCGGCTCA 59.755 55.000 29.70 23.34 0.00 4.26
250 251 1.735038 CGAGATGATATGCCGGCTCAG 60.735 57.143 29.70 9.83 0.00 3.35
251 252 1.274728 GAGATGATATGCCGGCTCAGT 59.725 52.381 29.70 14.17 0.00 3.41
252 253 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
253 254 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
254 255 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
255 256 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
256 257 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
257 258 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
258 259 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
259 260 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
260 261 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
261 262 1.450491 CGGCTCAGTCTCTCGGAGA 60.450 63.158 7.60 7.60 40.01 3.71
262 263 0.817634 CGGCTCAGTCTCTCGGAGAT 60.818 60.000 8.39 0.00 40.98 2.75
263 264 0.667993 GGCTCAGTCTCTCGGAGATG 59.332 60.000 8.39 4.48 40.98 2.90
264 265 0.030638 GCTCAGTCTCTCGGAGATGC 59.969 60.000 8.39 4.64 40.98 3.91
265 266 1.679139 CTCAGTCTCTCGGAGATGCT 58.321 55.000 8.39 6.89 40.98 3.79
266 267 1.603802 CTCAGTCTCTCGGAGATGCTC 59.396 57.143 8.39 0.17 40.98 4.26
267 268 1.065126 TCAGTCTCTCGGAGATGCTCA 60.065 52.381 8.39 0.00 40.98 4.26
268 269 1.955778 CAGTCTCTCGGAGATGCTCAT 59.044 52.381 8.39 0.00 40.98 2.90
269 270 3.145286 CAGTCTCTCGGAGATGCTCATA 58.855 50.000 8.39 0.00 40.98 2.15
270 271 3.189080 CAGTCTCTCGGAGATGCTCATAG 59.811 52.174 8.39 0.00 40.98 2.23
271 272 2.487762 GTCTCTCGGAGATGCTCATAGG 59.512 54.545 8.39 0.00 40.98 2.57
272 273 1.818060 CTCTCGGAGATGCTCATAGGG 59.182 57.143 8.39 0.00 33.89 3.53
273 274 1.425448 TCTCGGAGATGCTCATAGGGA 59.575 52.381 2.97 0.00 33.89 4.20
274 275 2.042297 TCTCGGAGATGCTCATAGGGAT 59.958 50.000 2.97 0.00 33.89 3.85
275 276 3.267031 TCTCGGAGATGCTCATAGGGATA 59.733 47.826 2.97 0.00 33.89 2.59
276 277 3.625853 TCGGAGATGCTCATAGGGATAG 58.374 50.000 0.00 0.00 31.08 2.08
277 278 2.692557 CGGAGATGCTCATAGGGATAGG 59.307 54.545 0.00 0.00 31.08 2.57
278 279 3.625969 CGGAGATGCTCATAGGGATAGGA 60.626 52.174 0.00 0.00 31.08 2.94
279 280 4.555689 GGAGATGCTCATAGGGATAGGAT 58.444 47.826 0.00 0.00 31.08 3.24
280 281 4.344679 GGAGATGCTCATAGGGATAGGATG 59.655 50.000 0.00 0.00 31.08 3.51
281 282 4.957830 AGATGCTCATAGGGATAGGATGT 58.042 43.478 0.00 0.00 0.00 3.06
282 283 4.715792 AGATGCTCATAGGGATAGGATGTG 59.284 45.833 0.00 0.00 0.00 3.21
283 284 2.568956 TGCTCATAGGGATAGGATGTGC 59.431 50.000 0.00 0.00 33.82 4.57
284 285 2.417924 GCTCATAGGGATAGGATGTGCG 60.418 54.545 0.00 0.00 0.00 5.34
285 286 2.828520 CTCATAGGGATAGGATGTGCGT 59.171 50.000 0.00 0.00 0.00 5.24
286 287 2.562738 TCATAGGGATAGGATGTGCGTG 59.437 50.000 0.00 0.00 0.00 5.34
287 288 2.082140 TAGGGATAGGATGTGCGTGT 57.918 50.000 0.00 0.00 0.00 4.49
288 289 0.465705 AGGGATAGGATGTGCGTGTG 59.534 55.000 0.00 0.00 0.00 3.82
289 290 0.178068 GGGATAGGATGTGCGTGTGT 59.822 55.000 0.00 0.00 0.00 3.72
290 291 1.290203 GGATAGGATGTGCGTGTGTG 58.710 55.000 0.00 0.00 0.00 3.82
291 292 0.652592 GATAGGATGTGCGTGTGTGC 59.347 55.000 0.00 0.00 0.00 4.57
292 293 1.083806 ATAGGATGTGCGTGTGTGCG 61.084 55.000 0.00 0.00 37.81 5.34
293 294 2.428960 TAGGATGTGCGTGTGTGCGT 62.429 55.000 0.00 0.00 37.81 5.24
294 295 2.631428 GATGTGCGTGTGTGCGTT 59.369 55.556 0.00 0.00 37.81 4.84
295 296 1.438710 GATGTGCGTGTGTGCGTTC 60.439 57.895 0.00 0.00 37.81 3.95
296 297 2.100024 GATGTGCGTGTGTGCGTTCA 62.100 55.000 0.00 0.00 37.81 3.18
297 298 1.506309 ATGTGCGTGTGTGCGTTCAT 61.506 50.000 0.00 0.00 37.81 2.57
298 299 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
299 300 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
300 301 0.319125 TGCGTGTGTGCGTTCATAGA 60.319 50.000 0.00 0.00 37.81 1.98
301 302 0.366871 GCGTGTGTGCGTTCATAGAG 59.633 55.000 0.00 0.00 0.00 2.43
302 303 0.992072 CGTGTGTGCGTTCATAGAGG 59.008 55.000 0.00 0.00 0.00 3.69
303 304 1.668919 CGTGTGTGCGTTCATAGAGGT 60.669 52.381 0.00 0.00 0.00 3.85
304 305 1.726791 GTGTGTGCGTTCATAGAGGTG 59.273 52.381 0.00 0.00 0.00 4.00
305 306 1.616374 TGTGTGCGTTCATAGAGGTGA 59.384 47.619 0.00 0.00 0.00 4.02
306 307 2.263077 GTGTGCGTTCATAGAGGTGAG 58.737 52.381 0.00 0.00 0.00 3.51
307 308 1.893137 TGTGCGTTCATAGAGGTGAGT 59.107 47.619 0.00 0.00 0.00 3.41
308 309 2.263077 GTGCGTTCATAGAGGTGAGTG 58.737 52.381 0.00 0.00 0.00 3.51
309 310 1.893137 TGCGTTCATAGAGGTGAGTGT 59.107 47.619 0.00 0.00 0.00 3.55
310 311 3.086282 TGCGTTCATAGAGGTGAGTGTA 58.914 45.455 0.00 0.00 0.00 2.90
311 312 3.699538 TGCGTTCATAGAGGTGAGTGTAT 59.300 43.478 0.00 0.00 0.00 2.29
312 313 4.045104 GCGTTCATAGAGGTGAGTGTATG 58.955 47.826 0.00 0.00 0.00 2.39
313 314 4.045104 CGTTCATAGAGGTGAGTGTATGC 58.955 47.826 0.00 0.00 0.00 3.14
314 315 3.990318 TCATAGAGGTGAGTGTATGCG 57.010 47.619 0.00 0.00 0.00 4.73
315 316 2.034685 TCATAGAGGTGAGTGTATGCGC 59.965 50.000 0.00 0.00 0.00 6.09
316 317 0.380733 TAGAGGTGAGTGTATGCGCG 59.619 55.000 0.00 0.00 0.00 6.86
317 318 1.153823 GAGGTGAGTGTATGCGCGT 60.154 57.895 8.43 7.55 0.00 6.01
318 319 1.413767 GAGGTGAGTGTATGCGCGTG 61.414 60.000 13.61 0.00 0.00 5.34
319 320 2.452813 GGTGAGTGTATGCGCGTGG 61.453 63.158 13.61 0.00 0.00 4.94
320 321 1.445410 GTGAGTGTATGCGCGTGGA 60.445 57.895 13.61 0.00 0.00 4.02
321 322 0.806102 GTGAGTGTATGCGCGTGGAT 60.806 55.000 13.61 8.38 0.00 3.41
322 323 0.741915 TGAGTGTATGCGCGTGGATA 59.258 50.000 13.61 6.04 0.00 2.59
323 324 1.339929 TGAGTGTATGCGCGTGGATAT 59.660 47.619 13.61 0.00 30.62 1.63
324 325 1.721389 GAGTGTATGCGCGTGGATATG 59.279 52.381 13.61 0.00 30.62 1.78
325 326 1.339929 AGTGTATGCGCGTGGATATGA 59.660 47.619 13.61 1.11 30.62 2.15
326 327 1.721389 GTGTATGCGCGTGGATATGAG 59.279 52.381 13.61 0.00 30.62 2.90
327 328 0.716108 GTATGCGCGTGGATATGAGC 59.284 55.000 13.61 0.00 38.85 4.26
330 331 2.355126 CGCGTGGATATGAGCGCT 60.355 61.111 11.27 11.27 46.56 5.92
331 332 1.951130 CGCGTGGATATGAGCGCTT 60.951 57.895 13.26 0.00 46.56 4.68
332 333 1.566563 GCGTGGATATGAGCGCTTG 59.433 57.895 13.26 0.00 45.48 4.01
333 334 1.154205 GCGTGGATATGAGCGCTTGT 61.154 55.000 13.26 5.98 45.48 3.16
334 335 0.578683 CGTGGATATGAGCGCTTGTG 59.421 55.000 13.26 0.00 0.00 3.33
335 336 1.656652 GTGGATATGAGCGCTTGTGT 58.343 50.000 13.26 0.85 0.00 3.72
336 337 1.594862 GTGGATATGAGCGCTTGTGTC 59.405 52.381 13.26 11.16 0.00 3.67
337 338 1.482182 TGGATATGAGCGCTTGTGTCT 59.518 47.619 13.26 0.00 0.00 3.41
338 339 1.863454 GGATATGAGCGCTTGTGTCTG 59.137 52.381 13.26 0.00 0.00 3.51
339 340 2.544685 GATATGAGCGCTTGTGTCTGT 58.455 47.619 13.26 0.00 0.00 3.41
340 341 3.490933 GGATATGAGCGCTTGTGTCTGTA 60.491 47.826 13.26 0.00 0.00 2.74
341 342 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
342 343 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
343 344 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
344 345 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
345 346 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
346 347 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
347 348 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
348 349 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
349 350 3.673323 CGCTTGTGTCTGTACTGATGCTA 60.673 47.826 5.69 0.00 0.00 3.49
350 351 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
351 352 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
352 353 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
353 354 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
384 385 0.110328 CGAAGAAGCAACAGCAGCAG 60.110 55.000 0.00 0.00 0.00 4.24
385 386 0.386985 GAAGAAGCAACAGCAGCAGC 60.387 55.000 0.00 0.00 42.56 5.25
386 387 1.105167 AAGAAGCAACAGCAGCAGCA 61.105 50.000 3.17 0.00 45.49 4.41
502 505 1.355720 AGGAAATCCACCTTCACCCAG 59.644 52.381 1.67 0.00 38.89 4.45
576 598 3.314635 CCTAGGCGTACCAAGTAGTACTG 59.685 52.174 5.39 0.00 40.42 2.74
596 618 0.167470 CTTCAGTGGCATTGACGCAG 59.833 55.000 12.63 4.06 0.00 5.18
680 706 8.340618 TGTAAACCGTGTCTAATAAGTACTCT 57.659 34.615 0.00 0.00 0.00 3.24
681 707 9.448438 TGTAAACCGTGTCTAATAAGTACTCTA 57.552 33.333 0.00 0.00 0.00 2.43
682 708 9.709600 GTAAACCGTGTCTAATAAGTACTCTAC 57.290 37.037 0.00 0.00 0.00 2.59
683 709 8.572855 AAACCGTGTCTAATAAGTACTCTACT 57.427 34.615 0.00 0.00 41.73 2.57
788 814 5.560183 GCAGCCACAAATTGACCGTATATAC 60.560 44.000 0.00 2.53 0.00 1.47
807 833 7.834881 ATATACACGGAGGAGAGAAAATACA 57.165 36.000 0.00 0.00 0.00 2.29
884 1063 1.603802 CCATAACATAGCGCCAAGGTG 59.396 52.381 2.29 0.00 0.00 4.00
891 1070 0.905809 TAGCGCCAAGGTGGTTAGGA 60.906 55.000 9.85 0.00 40.46 2.94
1039 1218 1.536943 AACACTCTCGTGCTCCTCCC 61.537 60.000 0.00 0.00 45.10 4.30
1047 1226 1.261238 CGTGCTCCTCCCTCTTTCCT 61.261 60.000 0.00 0.00 0.00 3.36
1068 1577 1.224592 CTCCCATCTTTCCCACCGG 59.775 63.158 0.00 0.00 0.00 5.28
1102 1624 2.579201 CAATCGACCGGAGCCAGT 59.421 61.111 9.46 0.00 0.00 4.00
1635 2157 3.403936 GGATTCCCCGGATGAACTG 57.596 57.895 0.73 0.00 0.00 3.16
1639 2161 0.326927 TTCCCCGGATGAACTGAACC 59.673 55.000 0.73 0.00 0.00 3.62
1640 2162 1.449601 CCCCGGATGAACTGAACCG 60.450 63.158 0.73 0.00 44.16 4.44
1754 2276 0.644331 CAGCGAGTTCATGAGAAGCG 59.356 55.000 0.00 0.35 36.43 4.68
1755 2277 0.528017 AGCGAGTTCATGAGAAGCGA 59.472 50.000 11.72 0.00 35.79 4.93
1845 2371 9.509855 GTTGAATTGTTGTTGATTGTGTAGTTA 57.490 29.630 0.00 0.00 0.00 2.24
1853 2379 6.694447 TGTTGATTGTGTAGTTAGGTAGGAC 58.306 40.000 0.00 0.00 0.00 3.85
1937 2467 1.270839 ACTGACCCATCTTTGTGACGG 60.271 52.381 0.00 0.00 0.00 4.79
1952 2482 4.133820 TGTGACGGGAGCAATAATAATGG 58.866 43.478 0.00 0.00 0.00 3.16
1975 2505 1.337703 TGCAGTGCATTTTCACCTGAC 59.662 47.619 15.37 0.00 37.68 3.51
1988 2518 5.689383 TTCACCTGACTATGCTTTCAAAC 57.311 39.130 0.00 0.00 0.00 2.93
2001 2536 4.099266 TGCTTTCAAACCATGCTTGTAGTT 59.901 37.500 0.00 0.00 0.00 2.24
2002 2537 5.300539 TGCTTTCAAACCATGCTTGTAGTTA 59.699 36.000 0.00 0.00 0.00 2.24
2003 2538 5.858581 GCTTTCAAACCATGCTTGTAGTTAG 59.141 40.000 0.00 0.00 0.00 2.34
2004 2539 6.293955 GCTTTCAAACCATGCTTGTAGTTAGA 60.294 38.462 0.00 0.00 0.00 2.10
2005 2540 7.575414 TTTCAAACCATGCTTGTAGTTAGAA 57.425 32.000 0.00 0.00 0.00 2.10
2006 2541 6.801539 TCAAACCATGCTTGTAGTTAGAAG 57.198 37.500 0.00 0.00 0.00 2.85
2008 2543 6.770785 TCAAACCATGCTTGTAGTTAGAAGTT 59.229 34.615 0.00 0.00 0.00 2.66
2009 2544 6.560253 AACCATGCTTGTAGTTAGAAGTTG 57.440 37.500 0.00 0.00 0.00 3.16
2057 2595 7.438757 TCTGTTCCAAATATTATAGCGCGTTTA 59.561 33.333 8.43 0.79 0.00 2.01
2060 2598 7.112528 TCCAAATATTATAGCGCGTTTAGTG 57.887 36.000 8.43 0.00 0.00 2.74
2070 2608 2.358015 CGCGTTTAGTGGGGGAAATTA 58.642 47.619 0.00 0.00 0.00 1.40
2071 2609 2.353579 CGCGTTTAGTGGGGGAAATTAG 59.646 50.000 0.00 0.00 0.00 1.73
2072 2610 3.349927 GCGTTTAGTGGGGGAAATTAGT 58.650 45.455 0.00 0.00 0.00 2.24
2073 2611 3.128068 GCGTTTAGTGGGGGAAATTAGTG 59.872 47.826 0.00 0.00 0.00 2.74
2074 2612 3.692593 CGTTTAGTGGGGGAAATTAGTGG 59.307 47.826 0.00 0.00 0.00 4.00
2128 2667 7.786118 CGTTTCGTAATTTCAATATGGACTACG 59.214 37.037 8.39 8.39 0.00 3.51
2137 2676 7.400599 TTCAATATGGACTACGTACAGACTT 57.599 36.000 0.00 0.00 26.04 3.01
2145 2684 6.658816 TGGACTACGTACAGACTTAAATACCA 59.341 38.462 0.00 0.00 0.00 3.25
2185 2724 8.712363 ACTTTTCATCAATATACATCCGATTCG 58.288 33.333 0.00 0.00 0.00 3.34
2234 2777 1.691219 GGATTGGTTGGGAGGCAGA 59.309 57.895 0.00 0.00 0.00 4.26
2292 2835 2.751806 GTTGGGAGGCAAGAGATTTGAG 59.248 50.000 0.00 0.00 0.00 3.02
2299 2842 3.328931 AGGCAAGAGATTTGAGGAAGTGA 59.671 43.478 0.00 0.00 0.00 3.41
2302 2845 5.010012 GGCAAGAGATTTGAGGAAGTGAAAA 59.990 40.000 0.00 0.00 0.00 2.29
2321 2864 5.248934 TGAAAAAGAATCATGGAGGCCAATT 59.751 36.000 5.01 0.00 36.95 2.32
2332 2875 0.190815 AGGCCAATTTCCACACCCTT 59.809 50.000 5.01 0.00 0.00 3.95
2356 2899 4.037208 GTCTTCCCCATGTTAATGCAGATG 59.963 45.833 0.00 0.00 31.93 2.90
2358 2901 2.244510 TCCCCATGTTAATGCAGATGGT 59.755 45.455 0.00 0.00 34.62 3.55
2364 2907 6.040729 CCCATGTTAATGCAGATGGTATGAAA 59.959 38.462 0.00 0.00 34.62 2.69
2368 2911 9.754382 ATGTTAATGCAGATGGTATGAAATTTC 57.246 29.630 11.41 11.41 0.00 2.17
2386 2929 2.727123 TCTTCTCAAACTGCCACCAA 57.273 45.000 0.00 0.00 0.00 3.67
2387 2930 3.011566 TCTTCTCAAACTGCCACCAAA 57.988 42.857 0.00 0.00 0.00 3.28
2389 2932 4.724399 TCTTCTCAAACTGCCACCAAATA 58.276 39.130 0.00 0.00 0.00 1.40
2396 2939 7.560991 TCTCAAACTGCCACCAAATATATCATT 59.439 33.333 0.00 0.00 0.00 2.57
2399 2942 9.985730 CAAACTGCCACCAAATATATCATTTAT 57.014 29.630 0.00 0.00 0.00 1.40
2489 3037 3.023832 CCATTTGTCCCTATCCACAACC 58.976 50.000 0.00 0.00 32.19 3.77
2490 3038 3.563261 CCATTTGTCCCTATCCACAACCA 60.563 47.826 0.00 0.00 32.19 3.67
2491 3039 4.280819 CATTTGTCCCTATCCACAACCAT 58.719 43.478 0.00 0.00 32.19 3.55
2492 3040 5.445069 CATTTGTCCCTATCCACAACCATA 58.555 41.667 0.00 0.00 32.19 2.74
2493 3041 4.771114 TTGTCCCTATCCACAACCATAG 57.229 45.455 0.00 0.00 0.00 2.23
2494 3042 3.731431 TGTCCCTATCCACAACCATAGT 58.269 45.455 0.00 0.00 0.00 2.12
2495 3043 3.709653 TGTCCCTATCCACAACCATAGTC 59.290 47.826 0.00 0.00 0.00 2.59
2496 3044 3.071167 GTCCCTATCCACAACCATAGTCC 59.929 52.174 0.00 0.00 0.00 3.85
2497 3045 2.372172 CCCTATCCACAACCATAGTCCC 59.628 54.545 0.00 0.00 0.00 4.46
2498 3046 2.372172 CCTATCCACAACCATAGTCCCC 59.628 54.545 0.00 0.00 0.00 4.81
2499 3047 1.979809 ATCCACAACCATAGTCCCCA 58.020 50.000 0.00 0.00 0.00 4.96
2500 3048 1.979809 TCCACAACCATAGTCCCCAT 58.020 50.000 0.00 0.00 0.00 4.00
2501 3049 3.138123 TCCACAACCATAGTCCCCATA 57.862 47.619 0.00 0.00 0.00 2.74
2502 3050 3.045634 TCCACAACCATAGTCCCCATAG 58.954 50.000 0.00 0.00 0.00 2.23
2503 3051 2.487265 CCACAACCATAGTCCCCATAGC 60.487 54.545 0.00 0.00 0.00 2.97
2504 3052 1.416401 ACAACCATAGTCCCCATAGCG 59.584 52.381 0.00 0.00 0.00 4.26
2505 3053 1.416401 CAACCATAGTCCCCATAGCGT 59.584 52.381 0.00 0.00 0.00 5.07
2506 3054 1.802553 ACCATAGTCCCCATAGCGTT 58.197 50.000 0.00 0.00 0.00 4.84
2507 3055 1.692519 ACCATAGTCCCCATAGCGTTC 59.307 52.381 0.00 0.00 0.00 3.95
2508 3056 1.002087 CCATAGTCCCCATAGCGTTCC 59.998 57.143 0.00 0.00 0.00 3.62
2509 3057 0.966920 ATAGTCCCCATAGCGTTCCG 59.033 55.000 0.00 0.00 0.00 4.30
2510 3058 0.106569 TAGTCCCCATAGCGTTCCGA 60.107 55.000 0.00 0.00 0.00 4.55
2511 3059 0.974010 AGTCCCCATAGCGTTCCGAA 60.974 55.000 0.00 0.00 0.00 4.30
2512 3060 0.808847 GTCCCCATAGCGTTCCGAAC 60.809 60.000 0.76 0.76 0.00 3.95
2513 3061 0.974010 TCCCCATAGCGTTCCGAACT 60.974 55.000 9.55 0.00 0.00 3.01
2514 3062 0.107848 CCCCATAGCGTTCCGAACTT 60.108 55.000 9.55 0.78 0.00 2.66
2515 3063 1.287425 CCCATAGCGTTCCGAACTTC 58.713 55.000 9.55 1.65 0.00 3.01
2516 3064 1.404986 CCCATAGCGTTCCGAACTTCA 60.405 52.381 9.55 0.00 0.00 3.02
2517 3065 2.550978 CCATAGCGTTCCGAACTTCAT 58.449 47.619 9.55 0.00 0.00 2.57
2518 3066 3.491964 CCCATAGCGTTCCGAACTTCATA 60.492 47.826 9.55 0.00 0.00 2.15
2519 3067 3.736252 CCATAGCGTTCCGAACTTCATAG 59.264 47.826 9.55 0.00 0.00 2.23
2520 3068 4.499188 CCATAGCGTTCCGAACTTCATAGA 60.499 45.833 9.55 0.00 0.00 1.98
2521 3069 2.877335 AGCGTTCCGAACTTCATAGAC 58.123 47.619 9.55 0.00 0.00 2.59
2522 3070 2.230508 AGCGTTCCGAACTTCATAGACA 59.769 45.455 9.55 0.00 0.00 3.41
2523 3071 2.599082 GCGTTCCGAACTTCATAGACAG 59.401 50.000 9.55 0.00 0.00 3.51
2524 3072 3.672511 GCGTTCCGAACTTCATAGACAGA 60.673 47.826 9.55 0.00 0.00 3.41
2525 3073 4.673441 CGTTCCGAACTTCATAGACAGAT 58.327 43.478 9.55 0.00 0.00 2.90
2526 3074 4.735822 CGTTCCGAACTTCATAGACAGATC 59.264 45.833 9.55 0.00 0.00 2.75
2527 3075 4.553756 TCCGAACTTCATAGACAGATCG 57.446 45.455 0.00 0.00 0.00 3.69
2528 3076 3.945921 TCCGAACTTCATAGACAGATCGT 59.054 43.478 0.00 0.00 0.00 3.73
2529 3077 4.398358 TCCGAACTTCATAGACAGATCGTT 59.602 41.667 0.00 0.00 0.00 3.85
2530 3078 5.103000 CCGAACTTCATAGACAGATCGTTT 58.897 41.667 0.00 0.00 0.00 3.60
2531 3079 5.577164 CCGAACTTCATAGACAGATCGTTTT 59.423 40.000 0.00 0.00 0.00 2.43
2532 3080 6.090898 CCGAACTTCATAGACAGATCGTTTTT 59.909 38.462 0.00 0.00 0.00 1.94
2533 3081 7.167481 CGAACTTCATAGACAGATCGTTTTTC 58.833 38.462 0.00 0.00 0.00 2.29
2534 3082 7.062371 CGAACTTCATAGACAGATCGTTTTTCT 59.938 37.037 0.00 0.00 0.00 2.52
2535 3083 7.820044 ACTTCATAGACAGATCGTTTTTCTC 57.180 36.000 0.00 0.00 0.00 2.87
2536 3084 7.607250 ACTTCATAGACAGATCGTTTTTCTCT 58.393 34.615 0.00 0.00 0.00 3.10
2537 3085 7.757624 ACTTCATAGACAGATCGTTTTTCTCTC 59.242 37.037 0.00 0.00 0.00 3.20
2538 3086 6.565234 TCATAGACAGATCGTTTTTCTCTCC 58.435 40.000 0.00 0.00 0.00 3.71
2539 3087 6.378564 TCATAGACAGATCGTTTTTCTCTCCT 59.621 38.462 0.00 0.00 0.00 3.69
2540 3088 5.476091 AGACAGATCGTTTTTCTCTCCTT 57.524 39.130 0.00 0.00 0.00 3.36
2541 3089 5.474825 AGACAGATCGTTTTTCTCTCCTTC 58.525 41.667 0.00 0.00 0.00 3.46
2542 3090 4.570930 ACAGATCGTTTTTCTCTCCTTCC 58.429 43.478 0.00 0.00 0.00 3.46
2543 3091 3.614616 CAGATCGTTTTTCTCTCCTTCCG 59.385 47.826 0.00 0.00 0.00 4.30
2544 3092 2.450609 TCGTTTTTCTCTCCTTCCGG 57.549 50.000 0.00 0.00 0.00 5.14
2545 3093 0.796927 CGTTTTTCTCTCCTTCCGGC 59.203 55.000 0.00 0.00 0.00 6.13
2546 3094 1.608283 CGTTTTTCTCTCCTTCCGGCT 60.608 52.381 0.00 0.00 0.00 5.52
2547 3095 2.505405 GTTTTTCTCTCCTTCCGGCTT 58.495 47.619 0.00 0.00 0.00 4.35
2548 3096 2.474410 TTTTCTCTCCTTCCGGCTTC 57.526 50.000 0.00 0.00 0.00 3.86
2549 3097 0.613777 TTTCTCTCCTTCCGGCTTCC 59.386 55.000 0.00 0.00 0.00 3.46
2550 3098 0.252284 TTCTCTCCTTCCGGCTTCCT 60.252 55.000 0.00 0.00 0.00 3.36
2551 3099 0.972983 TCTCTCCTTCCGGCTTCCTG 60.973 60.000 0.00 0.00 0.00 3.86
2552 3100 1.965754 CTCTCCTTCCGGCTTCCTGG 61.966 65.000 0.00 0.00 0.00 4.45
2553 3101 3.689002 CTCCTTCCGGCTTCCTGGC 62.689 68.421 0.00 0.00 37.94 4.85
2560 3108 4.722700 GGCTTCCTGGCGGCTGAA 62.723 66.667 17.63 14.67 0.00 3.02
2561 3109 2.672996 GCTTCCTGGCGGCTGAAA 60.673 61.111 17.63 1.88 0.00 2.69
2562 3110 2.982744 GCTTCCTGGCGGCTGAAAC 61.983 63.158 17.63 8.24 0.00 2.78
2563 3111 2.282180 TTCCTGGCGGCTGAAACC 60.282 61.111 17.63 0.00 0.00 3.27
2564 3112 3.860930 TTCCTGGCGGCTGAAACCC 62.861 63.158 17.63 0.00 0.00 4.11
2565 3113 4.351054 CCTGGCGGCTGAAACCCT 62.351 66.667 17.63 0.00 0.00 4.34
2566 3114 2.668632 CTGGCGGCTGAAACCCTA 59.331 61.111 11.43 0.00 0.00 3.53
2567 3115 1.450312 CTGGCGGCTGAAACCCTAG 60.450 63.158 11.43 0.00 0.00 3.02
2568 3116 2.824489 GGCGGCTGAAACCCTAGC 60.824 66.667 0.00 0.00 39.17 3.42
2572 3120 2.824489 GCTGAAACCCTAGCCGCC 60.824 66.667 0.00 0.00 33.89 6.13
2573 3121 2.511600 CTGAAACCCTAGCCGCCG 60.512 66.667 0.00 0.00 0.00 6.46
2574 3122 4.770874 TGAAACCCTAGCCGCCGC 62.771 66.667 0.00 0.00 0.00 6.53
2587 3135 3.474570 GCCGCCAGGAGAGACCAT 61.475 66.667 0.00 0.00 42.04 3.55
2588 3136 2.818132 CCGCCAGGAGAGACCATC 59.182 66.667 0.00 0.00 42.04 3.51
2589 3137 1.760086 CCGCCAGGAGAGACCATCT 60.760 63.158 0.00 0.00 42.61 2.90
2590 3138 1.333636 CCGCCAGGAGAGACCATCTT 61.334 60.000 0.00 0.00 38.84 2.40
2591 3139 0.539051 CGCCAGGAGAGACCATCTTT 59.461 55.000 0.00 0.00 38.84 2.52
2592 3140 1.472376 CGCCAGGAGAGACCATCTTTC 60.472 57.143 0.00 0.00 38.84 2.62
2593 3141 1.556911 GCCAGGAGAGACCATCTTTCA 59.443 52.381 0.00 0.00 38.84 2.69
2594 3142 2.419851 GCCAGGAGAGACCATCTTTCAG 60.420 54.545 0.00 0.00 38.84 3.02
2595 3143 2.419851 CCAGGAGAGACCATCTTTCAGC 60.420 54.545 0.00 0.00 38.84 4.26
2596 3144 1.480137 AGGAGAGACCATCTTTCAGCG 59.520 52.381 0.00 0.00 38.84 5.18
2597 3145 1.285578 GAGAGACCATCTTTCAGCGC 58.714 55.000 0.00 0.00 38.84 5.92
2598 3146 0.107945 AGAGACCATCTTTCAGCGCC 60.108 55.000 2.29 0.00 32.99 6.53
2599 3147 1.424493 GAGACCATCTTTCAGCGCCG 61.424 60.000 2.29 0.00 0.00 6.46
2600 3148 1.741770 GACCATCTTTCAGCGCCGT 60.742 57.895 2.29 0.00 0.00 5.68
2601 3149 1.696832 GACCATCTTTCAGCGCCGTC 61.697 60.000 2.29 0.00 0.00 4.79
2602 3150 2.464459 CCATCTTTCAGCGCCGTCC 61.464 63.158 2.29 0.00 0.00 4.79
2603 3151 1.448540 CATCTTTCAGCGCCGTCCT 60.449 57.895 2.29 0.00 0.00 3.85
2604 3152 1.153549 ATCTTTCAGCGCCGTCCTC 60.154 57.895 2.29 0.00 0.00 3.71
2605 3153 2.579684 ATCTTTCAGCGCCGTCCTCC 62.580 60.000 2.29 0.00 0.00 4.30
2606 3154 4.735132 TTTCAGCGCCGTCCTCCG 62.735 66.667 2.29 0.00 0.00 4.63
2619 3167 4.214327 CTCCGGCGGCTCCTCTTC 62.214 72.222 23.83 0.00 0.00 2.87
2643 3191 4.112341 GACCTCGGTCGTCGGTGG 62.112 72.222 0.00 6.74 39.77 4.61
2644 3192 4.962836 ACCTCGGTCGTCGGTGGT 62.963 66.667 7.86 7.86 39.69 4.16
2645 3193 4.415332 CCTCGGTCGTCGGTGGTG 62.415 72.222 0.00 0.00 39.77 4.17
2646 3194 3.359523 CTCGGTCGTCGGTGGTGA 61.360 66.667 0.00 0.00 39.77 4.02
2647 3195 3.324099 CTCGGTCGTCGGTGGTGAG 62.324 68.421 0.00 0.00 39.77 3.51
2648 3196 4.415332 CGGTCGTCGGTGGTGAGG 62.415 72.222 0.00 0.00 34.75 3.86
2649 3197 4.065281 GGTCGTCGGTGGTGAGGG 62.065 72.222 0.00 0.00 0.00 4.30
2650 3198 4.065281 GTCGTCGGTGGTGAGGGG 62.065 72.222 0.00 0.00 0.00 4.79
2653 3201 3.703127 GTCGGTGGTGAGGGGGTC 61.703 72.222 0.00 0.00 0.00 4.46
2662 3210 4.237207 GAGGGGGTCGCCGGATTC 62.237 72.222 5.05 0.00 0.00 2.52
2664 3212 4.851179 GGGGGTCGCCGGATTCAC 62.851 72.222 5.05 0.00 0.00 3.18
2669 3217 4.847516 TCGCCGGATTCACGCGAG 62.848 66.667 15.93 4.59 37.43 5.03
2687 3235 2.928116 CGAGTGGATCGTTTTTACTCCC 59.072 50.000 0.00 0.00 46.62 4.30
2688 3236 2.928116 GAGTGGATCGTTTTTACTCCCG 59.072 50.000 0.00 0.00 33.44 5.14
2689 3237 2.301009 AGTGGATCGTTTTTACTCCCGT 59.699 45.455 0.00 0.00 0.00 5.28
2690 3238 2.414138 GTGGATCGTTTTTACTCCCGTG 59.586 50.000 0.00 0.00 0.00 4.94
2691 3239 2.037511 TGGATCGTTTTTACTCCCGTGT 59.962 45.455 0.00 0.00 0.00 4.49
2692 3240 3.257873 TGGATCGTTTTTACTCCCGTGTA 59.742 43.478 0.00 0.00 0.00 2.90
2693 3241 3.861689 GGATCGTTTTTACTCCCGTGTAG 59.138 47.826 0.00 0.00 0.00 2.74
2694 3242 4.488879 GATCGTTTTTACTCCCGTGTAGT 58.511 43.478 0.00 0.00 0.00 2.73
2695 3243 3.900941 TCGTTTTTACTCCCGTGTAGTC 58.099 45.455 0.00 0.00 0.00 2.59
2696 3244 3.569701 TCGTTTTTACTCCCGTGTAGTCT 59.430 43.478 0.00 0.00 0.00 3.24
2697 3245 4.759693 TCGTTTTTACTCCCGTGTAGTCTA 59.240 41.667 0.00 0.00 0.00 2.59
2698 3246 5.091431 CGTTTTTACTCCCGTGTAGTCTAG 58.909 45.833 0.00 0.00 0.00 2.43
2699 3247 5.405797 GTTTTTACTCCCGTGTAGTCTAGG 58.594 45.833 0.00 0.00 0.00 3.02
2700 3248 4.307032 TTTACTCCCGTGTAGTCTAGGT 57.693 45.455 0.00 0.00 0.00 3.08
2701 3249 2.895242 ACTCCCGTGTAGTCTAGGTT 57.105 50.000 0.00 0.00 0.00 3.50
2702 3250 2.720915 ACTCCCGTGTAGTCTAGGTTC 58.279 52.381 0.00 0.00 0.00 3.62
2703 3251 2.308275 ACTCCCGTGTAGTCTAGGTTCT 59.692 50.000 0.00 0.00 0.00 3.01
2704 3252 3.245193 ACTCCCGTGTAGTCTAGGTTCTT 60.245 47.826 0.00 0.00 0.00 2.52
2705 3253 4.018960 ACTCCCGTGTAGTCTAGGTTCTTA 60.019 45.833 0.00 0.00 0.00 2.10
2706 3254 4.521146 TCCCGTGTAGTCTAGGTTCTTAG 58.479 47.826 0.00 0.00 0.00 2.18
2707 3255 3.631227 CCCGTGTAGTCTAGGTTCTTAGG 59.369 52.174 0.00 0.00 0.00 2.69
2708 3256 4.268359 CCGTGTAGTCTAGGTTCTTAGGT 58.732 47.826 0.00 0.00 0.00 3.08
2709 3257 4.704057 CCGTGTAGTCTAGGTTCTTAGGTT 59.296 45.833 0.00 0.00 0.00 3.50
2710 3258 5.392811 CCGTGTAGTCTAGGTTCTTAGGTTG 60.393 48.000 0.00 0.00 0.00 3.77
2711 3259 5.182760 CGTGTAGTCTAGGTTCTTAGGTTGT 59.817 44.000 0.00 0.00 0.00 3.32
2712 3260 6.294397 CGTGTAGTCTAGGTTCTTAGGTTGTT 60.294 42.308 0.00 0.00 0.00 2.83
2713 3261 7.089538 GTGTAGTCTAGGTTCTTAGGTTGTTC 58.910 42.308 0.00 0.00 0.00 3.18
2714 3262 6.779049 TGTAGTCTAGGTTCTTAGGTTGTTCA 59.221 38.462 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.750546 GGAAGGGGCGGGATTAACAC 60.751 60.000 0.00 0.00 0.00 3.32
8 9 1.610873 GGAAGGGGCGGGATTAACA 59.389 57.895 0.00 0.00 0.00 2.41
9 10 1.152819 GGGAAGGGGCGGGATTAAC 60.153 63.158 0.00 0.00 0.00 2.01
10 11 2.388610 GGGGAAGGGGCGGGATTAA 61.389 63.158 0.00 0.00 0.00 1.40
11 12 2.775219 GGGGAAGGGGCGGGATTA 60.775 66.667 0.00 0.00 0.00 1.75
20 21 2.891307 TAGAGGAAGCGGGGGAAGGG 62.891 65.000 0.00 0.00 0.00 3.95
21 22 0.764752 ATAGAGGAAGCGGGGGAAGG 60.765 60.000 0.00 0.00 0.00 3.46
22 23 0.682292 GATAGAGGAAGCGGGGGAAG 59.318 60.000 0.00 0.00 0.00 3.46
23 24 0.763223 GGATAGAGGAAGCGGGGGAA 60.763 60.000 0.00 0.00 0.00 3.97
24 25 1.152312 GGATAGAGGAAGCGGGGGA 60.152 63.158 0.00 0.00 0.00 4.81
25 26 0.114560 TAGGATAGAGGAAGCGGGGG 59.885 60.000 0.00 0.00 0.00 5.40
26 27 2.104170 GATAGGATAGAGGAAGCGGGG 58.896 57.143 0.00 0.00 0.00 5.73
27 28 2.104170 GGATAGGATAGAGGAAGCGGG 58.896 57.143 0.00 0.00 0.00 6.13
28 29 3.094484 AGGATAGGATAGAGGAAGCGG 57.906 52.381 0.00 0.00 0.00 5.52
29 30 5.690865 AGATAGGATAGGATAGAGGAAGCG 58.309 45.833 0.00 0.00 0.00 4.68
30 31 7.176690 GCATAGATAGGATAGGATAGAGGAAGC 59.823 44.444 0.00 0.00 0.00 3.86
31 32 8.448008 AGCATAGATAGGATAGGATAGAGGAAG 58.552 40.741 0.00 0.00 0.00 3.46
32 33 8.356761 AGCATAGATAGGATAGGATAGAGGAA 57.643 38.462 0.00 0.00 0.00 3.36
33 34 7.963027 AGCATAGATAGGATAGGATAGAGGA 57.037 40.000 0.00 0.00 0.00 3.71
48 49 4.100035 CGATGGCCTCCATTAGCATAGATA 59.900 45.833 3.32 0.00 45.26 1.98
50 51 2.234661 CGATGGCCTCCATTAGCATAGA 59.765 50.000 3.32 0.00 45.26 1.98
51 52 2.027745 ACGATGGCCTCCATTAGCATAG 60.028 50.000 3.32 0.00 45.26 2.23
94 95 6.346598 GATTTGAATCAGTTATGCATGCATGC 60.347 38.462 38.71 38.71 43.12 4.06
95 96 6.145534 GGATTTGAATCAGTTATGCATGCATG 59.854 38.462 37.43 24.97 36.27 4.06
108 109 3.303857 GCGAGCATCAGGATTTGAATCAG 60.304 47.826 6.11 0.00 39.77 2.90
111 112 2.646930 TGCGAGCATCAGGATTTGAAT 58.353 42.857 0.00 0.00 39.77 2.57
113 114 2.336945 ATGCGAGCATCAGGATTTGA 57.663 45.000 4.52 0.00 40.85 2.69
116 117 5.779529 AAAATAATGCGAGCATCAGGATT 57.220 34.783 11.26 6.38 35.31 3.01
119 120 4.046462 CCAAAAATAATGCGAGCATCAGG 58.954 43.478 11.26 2.77 35.31 3.86
122 123 6.833342 AAATCCAAAAATAATGCGAGCATC 57.167 33.333 11.26 0.00 35.31 3.91
123 124 8.891671 AATAAATCCAAAAATAATGCGAGCAT 57.108 26.923 4.52 4.52 38.46 3.79
124 125 8.715191 AAATAAATCCAAAAATAATGCGAGCA 57.285 26.923 0.00 0.00 0.00 4.26
136 137 9.157104 GCCGGAAATTCTAAAATAAATCCAAAA 57.843 29.630 5.05 0.00 0.00 2.44
137 138 7.489757 CGCCGGAAATTCTAAAATAAATCCAAA 59.510 33.333 5.05 0.00 0.00 3.28
138 139 6.975772 CGCCGGAAATTCTAAAATAAATCCAA 59.024 34.615 5.05 0.00 0.00 3.53
139 140 6.319152 TCGCCGGAAATTCTAAAATAAATCCA 59.681 34.615 5.05 0.00 0.00 3.41
140 141 6.731164 TCGCCGGAAATTCTAAAATAAATCC 58.269 36.000 5.05 0.00 0.00 3.01
141 142 7.148967 GCATCGCCGGAAATTCTAAAATAAATC 60.149 37.037 5.05 0.00 0.00 2.17
142 143 6.640907 GCATCGCCGGAAATTCTAAAATAAAT 59.359 34.615 5.05 0.00 0.00 1.40
143 144 5.974751 GCATCGCCGGAAATTCTAAAATAAA 59.025 36.000 5.05 0.00 0.00 1.40
144 145 5.516090 GCATCGCCGGAAATTCTAAAATAA 58.484 37.500 5.05 0.00 0.00 1.40
145 146 4.319190 CGCATCGCCGGAAATTCTAAAATA 60.319 41.667 5.05 0.00 0.00 1.40
146 147 3.548014 CGCATCGCCGGAAATTCTAAAAT 60.548 43.478 5.05 0.00 0.00 1.82
147 148 2.223157 CGCATCGCCGGAAATTCTAAAA 60.223 45.455 5.05 0.00 0.00 1.52
148 149 1.329292 CGCATCGCCGGAAATTCTAAA 59.671 47.619 5.05 0.00 0.00 1.85
149 150 0.934496 CGCATCGCCGGAAATTCTAA 59.066 50.000 5.05 0.00 0.00 2.10
150 151 0.179094 ACGCATCGCCGGAAATTCTA 60.179 50.000 5.05 0.00 0.00 2.10
151 152 1.024579 AACGCATCGCCGGAAATTCT 61.025 50.000 5.05 0.00 0.00 2.40
152 153 0.179174 AAACGCATCGCCGGAAATTC 60.179 50.000 5.05 0.00 0.00 2.17
153 154 0.242555 AAAACGCATCGCCGGAAATT 59.757 45.000 5.05 0.00 0.00 1.82
154 155 0.179174 GAAAACGCATCGCCGGAAAT 60.179 50.000 5.05 0.00 0.00 2.17
155 156 1.208103 GAAAACGCATCGCCGGAAA 59.792 52.632 5.05 0.00 0.00 3.13
156 157 1.507974 TTGAAAACGCATCGCCGGAA 61.508 50.000 5.05 0.00 0.00 4.30
157 158 1.302383 ATTGAAAACGCATCGCCGGA 61.302 50.000 5.05 0.00 0.00 5.14
158 159 1.133363 CATTGAAAACGCATCGCCGG 61.133 55.000 0.00 0.00 0.00 6.13
159 160 1.133363 CCATTGAAAACGCATCGCCG 61.133 55.000 0.00 0.00 0.00 6.46
160 161 0.801836 CCCATTGAAAACGCATCGCC 60.802 55.000 0.00 0.00 0.00 5.54
161 162 0.170116 TCCCATTGAAAACGCATCGC 59.830 50.000 0.00 0.00 0.00 4.58
162 163 1.202177 CCTCCCATTGAAAACGCATCG 60.202 52.381 0.00 0.00 0.00 3.84
163 164 2.091541 TCCTCCCATTGAAAACGCATC 58.908 47.619 0.00 0.00 0.00 3.91
164 165 2.094675 CTCCTCCCATTGAAAACGCAT 58.905 47.619 0.00 0.00 0.00 4.73
165 166 1.073125 TCTCCTCCCATTGAAAACGCA 59.927 47.619 0.00 0.00 0.00 5.24
166 167 1.468914 GTCTCCTCCCATTGAAAACGC 59.531 52.381 0.00 0.00 0.00 4.84
167 168 1.732259 CGTCTCCTCCCATTGAAAACG 59.268 52.381 0.00 0.00 0.00 3.60
168 169 2.779506 ACGTCTCCTCCCATTGAAAAC 58.220 47.619 0.00 0.00 0.00 2.43
169 170 3.072476 AGAACGTCTCCTCCCATTGAAAA 59.928 43.478 0.00 0.00 0.00 2.29
170 171 2.637872 AGAACGTCTCCTCCCATTGAAA 59.362 45.455 0.00 0.00 0.00 2.69
171 172 2.233922 GAGAACGTCTCCTCCCATTGAA 59.766 50.000 0.00 0.00 37.55 2.69
172 173 1.825474 GAGAACGTCTCCTCCCATTGA 59.175 52.381 0.00 0.00 37.55 2.57
173 174 1.550524 TGAGAACGTCTCCTCCCATTG 59.449 52.381 11.01 0.00 42.73 2.82
174 175 1.938585 TGAGAACGTCTCCTCCCATT 58.061 50.000 11.01 0.00 42.73 3.16
175 176 2.035632 GATGAGAACGTCTCCTCCCAT 58.964 52.381 11.01 0.00 42.73 4.00
176 177 1.475403 GATGAGAACGTCTCCTCCCA 58.525 55.000 11.01 0.00 42.73 4.37
177 178 0.382515 CGATGAGAACGTCTCCTCCC 59.617 60.000 11.01 3.62 42.73 4.30
178 179 1.064357 GTCGATGAGAACGTCTCCTCC 59.936 57.143 11.01 2.40 42.73 4.30
179 180 1.267632 CGTCGATGAGAACGTCTCCTC 60.268 57.143 0.00 8.49 42.73 3.71
180 181 0.727970 CGTCGATGAGAACGTCTCCT 59.272 55.000 0.00 3.44 42.73 3.69
181 182 0.725686 TCGTCGATGAGAACGTCTCC 59.274 55.000 2.39 0.00 42.73 3.71
182 183 1.800399 GTCGTCGATGAGAACGTCTC 58.200 55.000 7.79 7.74 43.65 3.36
183 184 0.094901 CGTCGTCGATGAGAACGTCT 59.905 55.000 7.79 0.00 39.71 4.18
184 185 0.094216 TCGTCGTCGATGAGAACGTC 59.906 55.000 13.11 0.00 41.35 4.34
185 186 0.094901 CTCGTCGTCGATGAGAACGT 59.905 55.000 31.88 0.00 45.52 3.99
186 187 0.586748 CCTCGTCGTCGATGAGAACG 60.587 60.000 35.32 20.56 45.52 3.95
187 188 0.862283 GCCTCGTCGTCGATGAGAAC 60.862 60.000 35.32 25.50 45.52 3.01
188 189 1.428219 GCCTCGTCGTCGATGAGAA 59.572 57.895 35.32 9.62 45.52 2.87
189 190 2.810012 CGCCTCGTCGTCGATGAGA 61.810 63.158 35.32 18.27 45.52 3.27
190 191 2.351322 CGCCTCGTCGTCGATGAG 60.351 66.667 29.65 29.65 45.21 2.90
191 192 4.531912 GCGCCTCGTCGTCGATGA 62.532 66.667 16.02 16.02 45.21 2.92
195 196 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
196 197 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
198 199 2.109538 TTATCGTAGGCGCCTCGTCG 62.110 60.000 36.73 32.16 36.23 5.12
199 200 0.659711 GTTATCGTAGGCGCCTCGTC 60.660 60.000 36.73 22.80 38.14 4.20
200 201 1.099879 AGTTATCGTAGGCGCCTCGT 61.100 55.000 36.73 24.44 38.14 4.18
201 202 0.030369 AAGTTATCGTAGGCGCCTCG 59.970 55.000 36.73 32.58 38.14 4.63
202 203 1.768510 GAAGTTATCGTAGGCGCCTC 58.231 55.000 36.73 23.04 38.14 4.70
203 204 0.030369 CGAAGTTATCGTAGGCGCCT 59.970 55.000 34.85 34.85 46.52 5.52
204 205 2.503256 CGAAGTTATCGTAGGCGCC 58.497 57.895 21.89 21.89 46.52 6.53
212 213 7.070183 TCATCTCGAGATTTACGAAGTTATCG 58.930 38.462 25.25 8.99 44.39 2.92
213 214 8.958175 ATCATCTCGAGATTTACGAAGTTATC 57.042 34.615 25.25 0.00 39.23 1.75
215 216 9.827411 CATATCATCTCGAGATTTACGAAGTTA 57.173 33.333 25.25 11.46 39.23 2.24
216 217 7.327275 GCATATCATCTCGAGATTTACGAAGTT 59.673 37.037 25.25 9.75 39.23 2.66
217 218 6.804295 GCATATCATCTCGAGATTTACGAAGT 59.196 38.462 25.25 8.23 39.23 3.01
218 219 6.252441 GGCATATCATCTCGAGATTTACGAAG 59.748 42.308 25.25 12.24 39.23 3.79
219 220 6.093404 GGCATATCATCTCGAGATTTACGAA 58.907 40.000 25.25 8.40 39.23 3.85
220 221 5.641709 GGCATATCATCTCGAGATTTACGA 58.358 41.667 25.25 18.74 38.11 3.43
221 222 4.497251 CGGCATATCATCTCGAGATTTACG 59.503 45.833 25.25 17.16 31.21 3.18
222 223 4.800993 CCGGCATATCATCTCGAGATTTAC 59.199 45.833 25.25 11.28 31.21 2.01
223 224 4.678044 GCCGGCATATCATCTCGAGATTTA 60.678 45.833 25.25 18.81 31.21 1.40
224 225 3.854666 CCGGCATATCATCTCGAGATTT 58.145 45.455 25.25 17.32 31.21 2.17
225 226 2.417924 GCCGGCATATCATCTCGAGATT 60.418 50.000 25.25 14.54 31.21 2.40
226 227 1.135915 GCCGGCATATCATCTCGAGAT 59.864 52.381 24.80 22.32 34.56 2.75
227 228 0.528017 GCCGGCATATCATCTCGAGA 59.472 55.000 24.80 19.19 0.00 4.04
228 229 0.529833 AGCCGGCATATCATCTCGAG 59.470 55.000 31.54 5.93 0.00 4.04
229 230 0.528017 GAGCCGGCATATCATCTCGA 59.472 55.000 31.54 0.00 0.00 4.04
230 231 0.244721 TGAGCCGGCATATCATCTCG 59.755 55.000 31.54 0.00 0.00 4.04
231 232 1.274728 ACTGAGCCGGCATATCATCTC 59.725 52.381 31.54 15.36 0.00 2.75
232 233 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
233 234 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
234 235 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
235 236 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
236 237 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
237 238 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
238 239 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
239 240 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
240 241 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
241 242 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
242 243 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
243 244 0.817634 ATCTCCGAGAGACTGAGCCG 60.818 60.000 4.07 0.00 41.76 5.52
244 245 0.667993 CATCTCCGAGAGACTGAGCC 59.332 60.000 4.07 0.00 41.76 4.70
245 246 0.030638 GCATCTCCGAGAGACTGAGC 59.969 60.000 4.07 5.25 41.76 4.26
246 247 1.603802 GAGCATCTCCGAGAGACTGAG 59.396 57.143 4.07 0.00 41.76 3.35
247 248 1.065126 TGAGCATCTCCGAGAGACTGA 60.065 52.381 4.07 0.00 41.76 3.41
248 249 1.387539 TGAGCATCTCCGAGAGACTG 58.612 55.000 4.07 0.00 41.76 3.51
249 250 2.363306 ATGAGCATCTCCGAGAGACT 57.637 50.000 4.07 3.60 41.76 3.24
250 251 2.487762 CCTATGAGCATCTCCGAGAGAC 59.512 54.545 4.07 0.00 41.76 3.36
251 252 2.554124 CCCTATGAGCATCTCCGAGAGA 60.554 54.545 4.07 6.14 43.20 3.10
252 253 1.818060 CCCTATGAGCATCTCCGAGAG 59.182 57.143 4.07 0.00 34.92 3.20
253 254 1.425448 TCCCTATGAGCATCTCCGAGA 59.575 52.381 0.00 0.00 34.92 4.04
254 255 1.916506 TCCCTATGAGCATCTCCGAG 58.083 55.000 0.00 0.00 34.92 4.63
255 256 2.612285 ATCCCTATGAGCATCTCCGA 57.388 50.000 0.00 0.00 34.92 4.55
256 257 2.692557 CCTATCCCTATGAGCATCTCCG 59.307 54.545 0.00 0.00 34.92 4.63
257 258 3.987745 TCCTATCCCTATGAGCATCTCC 58.012 50.000 0.00 0.00 34.92 3.71
258 259 4.961730 ACATCCTATCCCTATGAGCATCTC 59.038 45.833 0.00 0.00 34.92 2.75
259 260 4.715792 CACATCCTATCCCTATGAGCATCT 59.284 45.833 0.00 0.00 34.92 2.90
260 261 4.682859 GCACATCCTATCCCTATGAGCATC 60.683 50.000 0.00 0.00 37.23 3.91
261 262 3.199508 GCACATCCTATCCCTATGAGCAT 59.800 47.826 0.00 0.00 37.23 3.79
262 263 2.568956 GCACATCCTATCCCTATGAGCA 59.431 50.000 0.00 0.00 37.23 4.26
263 264 2.417924 CGCACATCCTATCCCTATGAGC 60.418 54.545 0.00 0.00 34.95 4.26
264 265 2.828520 ACGCACATCCTATCCCTATGAG 59.171 50.000 0.00 0.00 0.00 2.90
265 266 2.562738 CACGCACATCCTATCCCTATGA 59.437 50.000 0.00 0.00 0.00 2.15
266 267 2.300152 ACACGCACATCCTATCCCTATG 59.700 50.000 0.00 0.00 0.00 2.23
267 268 2.300152 CACACGCACATCCTATCCCTAT 59.700 50.000 0.00 0.00 0.00 2.57
268 269 1.686587 CACACGCACATCCTATCCCTA 59.313 52.381 0.00 0.00 0.00 3.53
269 270 0.465705 CACACGCACATCCTATCCCT 59.534 55.000 0.00 0.00 0.00 4.20
270 271 0.178068 ACACACGCACATCCTATCCC 59.822 55.000 0.00 0.00 0.00 3.85
271 272 1.290203 CACACACGCACATCCTATCC 58.710 55.000 0.00 0.00 0.00 2.59
272 273 0.652592 GCACACACGCACATCCTATC 59.347 55.000 0.00 0.00 0.00 2.08
273 274 1.083806 CGCACACACGCACATCCTAT 61.084 55.000 0.00 0.00 0.00 2.57
274 275 1.736282 CGCACACACGCACATCCTA 60.736 57.895 0.00 0.00 0.00 2.94
275 276 3.043713 CGCACACACGCACATCCT 61.044 61.111 0.00 0.00 0.00 3.24
276 277 2.764251 GAACGCACACACGCACATCC 62.764 60.000 0.00 0.00 36.19 3.51
277 278 1.438710 GAACGCACACACGCACATC 60.439 57.895 0.00 0.00 36.19 3.06
278 279 1.506309 ATGAACGCACACACGCACAT 61.506 50.000 0.00 0.00 36.19 3.21
279 280 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
280 281 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
281 282 0.319125 TCTATGAACGCACACACGCA 60.319 50.000 0.00 0.00 36.19 5.24
282 283 0.366871 CTCTATGAACGCACACACGC 59.633 55.000 0.00 0.00 36.19 5.34
283 284 0.992072 CCTCTATGAACGCACACACG 59.008 55.000 0.00 0.00 39.50 4.49
284 285 1.726791 CACCTCTATGAACGCACACAC 59.273 52.381 0.00 0.00 0.00 3.82
285 286 1.616374 TCACCTCTATGAACGCACACA 59.384 47.619 0.00 0.00 0.00 3.72
286 287 2.263077 CTCACCTCTATGAACGCACAC 58.737 52.381 0.00 0.00 0.00 3.82
287 288 1.893137 ACTCACCTCTATGAACGCACA 59.107 47.619 0.00 0.00 0.00 4.57
288 289 2.263077 CACTCACCTCTATGAACGCAC 58.737 52.381 0.00 0.00 0.00 5.34
289 290 1.893137 ACACTCACCTCTATGAACGCA 59.107 47.619 0.00 0.00 0.00 5.24
290 291 2.656560 ACACTCACCTCTATGAACGC 57.343 50.000 0.00 0.00 0.00 4.84
291 292 4.045104 GCATACACTCACCTCTATGAACG 58.955 47.826 0.00 0.00 0.00 3.95
292 293 4.045104 CGCATACACTCACCTCTATGAAC 58.955 47.826 0.00 0.00 0.00 3.18
293 294 3.490933 GCGCATACACTCACCTCTATGAA 60.491 47.826 0.30 0.00 0.00 2.57
294 295 2.034685 GCGCATACACTCACCTCTATGA 59.965 50.000 0.30 0.00 0.00 2.15
295 296 2.398498 GCGCATACACTCACCTCTATG 58.602 52.381 0.30 0.00 0.00 2.23
296 297 1.001268 CGCGCATACACTCACCTCTAT 60.001 52.381 8.75 0.00 0.00 1.98
297 298 0.380733 CGCGCATACACTCACCTCTA 59.619 55.000 8.75 0.00 0.00 2.43
298 299 1.139734 CGCGCATACACTCACCTCT 59.860 57.895 8.75 0.00 0.00 3.69
299 300 1.153823 ACGCGCATACACTCACCTC 60.154 57.895 5.73 0.00 0.00 3.85
300 301 1.446099 CACGCGCATACACTCACCT 60.446 57.895 5.73 0.00 0.00 4.00
301 302 2.452813 CCACGCGCATACACTCACC 61.453 63.158 5.73 0.00 0.00 4.02
302 303 0.806102 ATCCACGCGCATACACTCAC 60.806 55.000 5.73 0.00 0.00 3.51
303 304 0.741915 TATCCACGCGCATACACTCA 59.258 50.000 5.73 0.00 0.00 3.41
304 305 1.721389 CATATCCACGCGCATACACTC 59.279 52.381 5.73 0.00 0.00 3.51
305 306 1.339929 TCATATCCACGCGCATACACT 59.660 47.619 5.73 0.00 0.00 3.55
306 307 1.721389 CTCATATCCACGCGCATACAC 59.279 52.381 5.73 0.00 0.00 2.90
307 308 1.934849 GCTCATATCCACGCGCATACA 60.935 52.381 5.73 0.00 0.00 2.29
308 309 0.716108 GCTCATATCCACGCGCATAC 59.284 55.000 5.73 0.00 0.00 2.39
309 310 0.732538 CGCTCATATCCACGCGCATA 60.733 55.000 5.73 0.00 39.11 3.14
310 311 2.023771 CGCTCATATCCACGCGCAT 61.024 57.895 5.73 0.00 39.11 4.73
311 312 2.658268 CGCTCATATCCACGCGCA 60.658 61.111 5.73 0.00 39.11 6.09
315 316 0.578683 CACAAGCGCTCATATCCACG 59.421 55.000 12.06 0.00 0.00 4.94
316 317 1.594862 GACACAAGCGCTCATATCCAC 59.405 52.381 12.06 0.00 0.00 4.02
317 318 1.482182 AGACACAAGCGCTCATATCCA 59.518 47.619 12.06 0.00 0.00 3.41
318 319 1.863454 CAGACACAAGCGCTCATATCC 59.137 52.381 12.06 0.00 0.00 2.59
319 320 2.544685 ACAGACACAAGCGCTCATATC 58.455 47.619 12.06 7.00 0.00 1.63
320 321 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
321 322 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
322 323 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
323 324 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
324 325 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
325 326 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
326 327 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
327 328 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
328 329 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
329 330 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
352 353 3.442273 TGCTTCTTCGTCTTGGTGTTTTT 59.558 39.130 0.00 0.00 0.00 1.94
353 354 3.013921 TGCTTCTTCGTCTTGGTGTTTT 58.986 40.909 0.00 0.00 0.00 2.43
354 355 2.639065 TGCTTCTTCGTCTTGGTGTTT 58.361 42.857 0.00 0.00 0.00 2.83
478 481 3.006859 GGGTGAAGGTGGATTTCCTTTTG 59.993 47.826 0.00 0.00 44.19 2.44
576 598 1.154150 GCGTCAATGCCACTGAAGC 60.154 57.895 0.00 0.00 40.26 3.86
596 618 1.178534 TAACCTTTGCCTGCCTGTGC 61.179 55.000 0.00 0.00 38.26 4.57
680 706 0.917533 ACTACTCCTGGCTCCGAGTA 59.082 55.000 0.00 8.09 39.92 2.59
681 707 0.917533 TACTACTCCTGGCTCCGAGT 59.082 55.000 0.00 6.85 42.03 4.18
682 708 1.310904 GTACTACTCCTGGCTCCGAG 58.689 60.000 0.00 0.00 0.00 4.63
683 709 0.622136 TGTACTACTCCTGGCTCCGA 59.378 55.000 0.00 0.00 0.00 4.55
764 790 0.878416 TACGGTCAATTTGTGGCTGC 59.122 50.000 0.00 0.00 42.47 5.25
788 814 6.554334 TTTTTGTATTTTCTCTCCTCCGTG 57.446 37.500 0.00 0.00 0.00 4.94
869 895 0.616371 TAACCACCTTGGCGCTATGT 59.384 50.000 7.64 0.00 42.67 2.29
870 896 1.299541 CTAACCACCTTGGCGCTATG 58.700 55.000 7.64 2.88 42.67 2.23
871 897 0.180406 CCTAACCACCTTGGCGCTAT 59.820 55.000 7.64 0.00 42.67 2.97
872 898 0.905809 TCCTAACCACCTTGGCGCTA 60.906 55.000 7.64 0.00 42.67 4.26
873 899 2.185310 CTCCTAACCACCTTGGCGCT 62.185 60.000 7.64 0.00 42.67 5.92
884 1063 1.684734 TGACGGGCTCCTCCTAACC 60.685 63.158 0.00 0.00 34.39 2.85
891 1070 2.504274 TTTGTCGTGACGGGCTCCT 61.504 57.895 4.70 0.00 0.00 3.69
968 1147 2.972348 ACCTGGCGAGGATTTATAGGA 58.028 47.619 23.01 0.00 42.93 2.94
1029 1208 1.483004 GTAGGAAAGAGGGAGGAGCAC 59.517 57.143 0.00 0.00 0.00 4.40
1039 1218 4.141597 GGAAAGATGGGAGGTAGGAAAGAG 60.142 50.000 0.00 0.00 0.00 2.85
1047 1226 1.591768 GGTGGGAAAGATGGGAGGTA 58.408 55.000 0.00 0.00 0.00 3.08
1305 1827 3.414700 CCTGTCGGTGCGCTGAAC 61.415 66.667 11.09 6.08 0.00 3.18
1737 2259 0.919981 CTCGCTTCTCATGAACTCGC 59.080 55.000 0.00 0.00 0.00 5.03
1754 2276 2.855370 GGTCTTTCTCGCGAATTCTCTC 59.145 50.000 11.33 0.00 0.00 3.20
1755 2277 2.231478 TGGTCTTTCTCGCGAATTCTCT 59.769 45.455 11.33 0.00 0.00 3.10
1780 2302 3.163630 ACAACAACAAAGCACACCATC 57.836 42.857 0.00 0.00 0.00 3.51
1789 2311 9.897744 ATGTACAATGATTCTACAACAACAAAG 57.102 29.630 0.00 0.00 0.00 2.77
1845 2371 2.599408 TCTTCGGTTGAGTCCTACCT 57.401 50.000 9.20 0.00 36.28 3.08
1937 2467 4.021719 ACTGCATGCCATTATTATTGCTCC 60.022 41.667 16.68 0.00 0.00 4.70
1975 2505 4.813027 ACAAGCATGGTTTGAAAGCATAG 58.187 39.130 20.54 15.64 46.99 2.23
1988 2518 7.849804 ATACAACTTCTAACTACAAGCATGG 57.150 36.000 0.00 0.00 0.00 3.66
2036 2574 6.146510 CCACTAAACGCGCTATAATATTTGGA 59.853 38.462 5.73 0.00 0.00 3.53
2050 2588 1.170442 AATTTCCCCCACTAAACGCG 58.830 50.000 3.53 3.53 0.00 6.01
2057 2595 2.644151 ACTCCACTAATTTCCCCCACT 58.356 47.619 0.00 0.00 0.00 4.00
2060 2598 4.445879 GGTCATACTCCACTAATTTCCCCC 60.446 50.000 0.00 0.00 0.00 5.40
2070 2608 3.637769 GGAAGAGAGGTCATACTCCACT 58.362 50.000 0.00 0.00 38.26 4.00
2071 2609 2.359531 CGGAAGAGAGGTCATACTCCAC 59.640 54.545 0.00 0.00 38.26 4.02
2072 2610 2.241430 TCGGAAGAGAGGTCATACTCCA 59.759 50.000 0.00 0.00 38.26 3.86
2073 2611 2.933573 TCGGAAGAGAGGTCATACTCC 58.066 52.381 0.00 0.00 38.26 3.85
2074 2612 5.523438 AATTCGGAAGAGAGGTCATACTC 57.477 43.478 0.00 0.00 43.69 2.59
2160 2699 8.925700 TCGAATCGGATGTATATTGATGAAAAG 58.074 33.333 1.76 0.00 0.00 2.27
2234 2777 9.911788 ATCATATGTCTCATAAACTCAAACCTT 57.088 29.630 1.90 0.00 0.00 3.50
2292 2835 5.623141 GCCTCCATGATTCTTTTTCACTTCC 60.623 44.000 0.00 0.00 0.00 3.46
2299 2842 5.767277 AATTGGCCTCCATGATTCTTTTT 57.233 34.783 3.32 0.00 31.53 1.94
2302 2845 3.708121 GGAAATTGGCCTCCATGATTCTT 59.292 43.478 3.32 0.00 31.53 2.52
2321 2864 0.476771 GGGAAGACAAGGGTGTGGAA 59.523 55.000 0.00 0.00 38.41 3.53
2332 2875 3.010027 TCTGCATTAACATGGGGAAGACA 59.990 43.478 0.00 0.00 0.00 3.41
2356 2899 6.808704 GGCAGTTTGAGAAGAAATTTCATACC 59.191 38.462 19.99 7.22 0.00 2.73
2358 2901 7.370383 GTGGCAGTTTGAGAAGAAATTTCATA 58.630 34.615 19.99 0.00 0.00 2.15
2364 2907 3.565307 TGGTGGCAGTTTGAGAAGAAAT 58.435 40.909 0.00 0.00 0.00 2.17
2368 2911 5.649782 ATATTTGGTGGCAGTTTGAGAAG 57.350 39.130 0.00 0.00 0.00 2.85
2445 2993 2.124736 GCCCGGTCAATGCTAGCA 60.125 61.111 21.85 21.85 0.00 3.49
2446 2994 1.103398 ATTGCCCGGTCAATGCTAGC 61.103 55.000 10.47 8.10 35.52 3.42
2469 3017 3.696045 TGGTTGTGGATAGGGACAAATG 58.304 45.455 0.00 0.00 33.96 2.32
2477 3025 2.372172 GGGGACTATGGTTGTGGATAGG 59.628 54.545 0.00 0.00 0.00 2.57
2489 3037 2.457366 GGAACGCTATGGGGACTATG 57.543 55.000 0.00 0.00 0.00 2.23
2504 3052 4.735822 CGATCTGTCTATGAAGTTCGGAAC 59.264 45.833 12.91 12.91 33.86 3.62
2505 3053 4.398358 ACGATCTGTCTATGAAGTTCGGAA 59.602 41.667 0.00 0.00 39.04 4.30
2506 3054 3.945921 ACGATCTGTCTATGAAGTTCGGA 59.054 43.478 0.00 0.00 39.04 4.55
2507 3055 4.294416 ACGATCTGTCTATGAAGTTCGG 57.706 45.455 0.00 0.00 39.04 4.30
2508 3056 6.633668 AAAACGATCTGTCTATGAAGTTCG 57.366 37.500 0.00 0.00 40.04 3.95
2509 3057 8.245701 AGAAAAACGATCTGTCTATGAAGTTC 57.754 34.615 0.00 0.00 0.00 3.01
2510 3058 8.091449 AGAGAAAAACGATCTGTCTATGAAGTT 58.909 33.333 0.00 0.00 0.00 2.66
2511 3059 7.607250 AGAGAAAAACGATCTGTCTATGAAGT 58.393 34.615 0.00 0.00 0.00 3.01
2512 3060 7.221838 GGAGAGAAAAACGATCTGTCTATGAAG 59.778 40.741 0.00 0.00 37.37 3.02
2513 3061 7.036220 GGAGAGAAAAACGATCTGTCTATGAA 58.964 38.462 0.00 0.00 37.37 2.57
2514 3062 6.378564 AGGAGAGAAAAACGATCTGTCTATGA 59.621 38.462 0.00 0.00 37.37 2.15
2515 3063 6.568869 AGGAGAGAAAAACGATCTGTCTATG 58.431 40.000 0.00 0.00 37.37 2.23
2516 3064 6.783708 AGGAGAGAAAAACGATCTGTCTAT 57.216 37.500 0.00 0.00 37.37 1.98
2517 3065 6.350277 GGAAGGAGAGAAAAACGATCTGTCTA 60.350 42.308 0.00 0.00 37.37 2.59
2518 3066 5.474825 GAAGGAGAGAAAAACGATCTGTCT 58.525 41.667 0.00 0.00 37.37 3.41
2519 3067 4.627900 GGAAGGAGAGAAAAACGATCTGTC 59.372 45.833 0.00 0.00 36.69 3.51
2520 3068 4.570930 GGAAGGAGAGAAAAACGATCTGT 58.429 43.478 0.00 0.00 0.00 3.41
2521 3069 3.614616 CGGAAGGAGAGAAAAACGATCTG 59.385 47.826 0.00 0.00 0.00 2.90
2522 3070 3.851098 CGGAAGGAGAGAAAAACGATCT 58.149 45.455 0.00 0.00 0.00 2.75
2543 3091 4.722700 TTCAGCCGCCAGGAAGCC 62.723 66.667 0.00 0.00 41.02 4.35
2544 3092 2.672996 TTTCAGCCGCCAGGAAGC 60.673 61.111 0.00 0.00 41.02 3.86
2545 3093 2.335712 GGTTTCAGCCGCCAGGAAG 61.336 63.158 0.00 0.00 41.02 3.46
2546 3094 2.282180 GGTTTCAGCCGCCAGGAA 60.282 61.111 0.00 0.00 41.02 3.36
2547 3095 4.344865 GGGTTTCAGCCGCCAGGA 62.345 66.667 0.00 0.00 41.02 3.86
2548 3096 2.876368 CTAGGGTTTCAGCCGCCAGG 62.876 65.000 0.00 0.00 41.56 4.45
2549 3097 1.450312 CTAGGGTTTCAGCCGCCAG 60.450 63.158 0.00 0.00 41.56 4.85
2550 3098 2.668632 CTAGGGTTTCAGCCGCCA 59.331 61.111 0.00 0.00 41.56 5.69
2551 3099 2.824489 GCTAGGGTTTCAGCCGCC 60.824 66.667 0.00 0.00 41.56 6.13
2555 3103 2.824489 GGCGGCTAGGGTTTCAGC 60.824 66.667 0.00 0.00 37.05 4.26
2556 3104 2.511600 CGGCGGCTAGGGTTTCAG 60.512 66.667 7.61 0.00 0.00 3.02
2557 3105 4.770874 GCGGCGGCTAGGGTTTCA 62.771 66.667 9.78 0.00 35.83 2.69
2570 3118 3.453070 GATGGTCTCTCCTGGCGGC 62.453 68.421 0.00 0.00 37.07 6.53
2571 3119 1.333636 AAGATGGTCTCTCCTGGCGG 61.334 60.000 0.00 0.00 37.07 6.13
2572 3120 0.539051 AAAGATGGTCTCTCCTGGCG 59.461 55.000 0.00 0.00 37.07 5.69
2573 3121 1.556911 TGAAAGATGGTCTCTCCTGGC 59.443 52.381 0.00 0.00 37.07 4.85
2574 3122 2.419851 GCTGAAAGATGGTCTCTCCTGG 60.420 54.545 0.00 0.00 34.07 4.45
2575 3123 2.738000 CGCTGAAAGATGGTCTCTCCTG 60.738 54.545 0.00 0.00 34.07 3.86
2576 3124 1.480137 CGCTGAAAGATGGTCTCTCCT 59.520 52.381 0.00 0.00 34.07 3.69
2577 3125 1.933247 CGCTGAAAGATGGTCTCTCC 58.067 55.000 0.00 0.00 34.07 3.71
2578 3126 1.285578 GCGCTGAAAGATGGTCTCTC 58.714 55.000 0.00 0.00 34.07 3.20
2579 3127 0.107945 GGCGCTGAAAGATGGTCTCT 60.108 55.000 7.64 0.00 34.07 3.10
2580 3128 1.424493 CGGCGCTGAAAGATGGTCTC 61.424 60.000 11.90 0.00 34.07 3.36
2581 3129 1.448540 CGGCGCTGAAAGATGGTCT 60.449 57.895 11.90 0.00 34.07 3.85
2582 3130 1.696832 GACGGCGCTGAAAGATGGTC 61.697 60.000 25.98 2.95 34.07 4.02
2583 3131 1.741770 GACGGCGCTGAAAGATGGT 60.742 57.895 25.98 0.00 34.07 3.55
2584 3132 2.464459 GGACGGCGCTGAAAGATGG 61.464 63.158 25.98 0.00 34.07 3.51
2585 3133 1.424493 GAGGACGGCGCTGAAAGATG 61.424 60.000 25.98 0.00 34.07 2.90
2586 3134 1.153549 GAGGACGGCGCTGAAAGAT 60.154 57.895 25.98 0.00 34.07 2.40
2587 3135 2.261671 GAGGACGGCGCTGAAAGA 59.738 61.111 25.98 0.00 34.07 2.52
2588 3136 2.815647 GGAGGACGGCGCTGAAAG 60.816 66.667 25.98 4.48 0.00 2.62
2589 3137 4.735132 CGGAGGACGGCGCTGAAA 62.735 66.667 25.98 0.00 39.42 2.69
2602 3150 4.214327 GAAGAGGAGCCGCCGGAG 62.214 72.222 7.68 0.00 43.43 4.63
2626 3174 4.112341 CCACCGACGACCGAGGTC 62.112 72.222 12.07 12.07 41.76 3.85
2627 3175 4.962836 ACCACCGACGACCGAGGT 62.963 66.667 0.00 0.00 41.76 3.85
2628 3176 4.415332 CACCACCGACGACCGAGG 62.415 72.222 0.00 1.98 41.76 4.63
2629 3177 3.324099 CTCACCACCGACGACCGAG 62.324 68.421 0.00 0.00 41.76 4.63
2630 3178 3.359523 CTCACCACCGACGACCGA 61.360 66.667 0.00 0.00 41.76 4.69
2631 3179 4.415332 CCTCACCACCGACGACCG 62.415 72.222 0.00 0.00 38.18 4.79
2632 3180 4.065281 CCCTCACCACCGACGACC 62.065 72.222 0.00 0.00 0.00 4.79
2633 3181 4.065281 CCCCTCACCACCGACGAC 62.065 72.222 0.00 0.00 0.00 4.34
2636 3184 3.703127 GACCCCCTCACCACCGAC 61.703 72.222 0.00 0.00 0.00 4.79
2645 3193 4.237207 GAATCCGGCGACCCCCTC 62.237 72.222 9.30 0.00 0.00 4.30
2647 3195 4.851179 GTGAATCCGGCGACCCCC 62.851 72.222 9.30 0.00 0.00 5.40
2654 3202 3.554692 CACTCGCGTGAATCCGGC 61.555 66.667 16.04 0.00 43.97 6.13
2655 3203 2.629050 ATCCACTCGCGTGAATCCGG 62.629 60.000 16.04 0.00 43.97 5.14
2656 3204 1.209275 GATCCACTCGCGTGAATCCG 61.209 60.000 16.04 0.00 43.97 4.18
2657 3205 1.209275 CGATCCACTCGCGTGAATCC 61.209 60.000 16.04 0.00 43.97 3.01
2658 3206 2.208074 CGATCCACTCGCGTGAATC 58.792 57.895 16.04 0.00 43.97 2.52
2659 3207 4.402192 CGATCCACTCGCGTGAAT 57.598 55.556 16.04 0.00 43.97 2.57
2667 3215 2.928116 CGGGAGTAAAAACGATCCACTC 59.072 50.000 0.00 0.00 35.87 3.51
2668 3216 2.301009 ACGGGAGTAAAAACGATCCACT 59.699 45.455 0.00 0.00 44.60 4.00
2669 3217 2.414138 CACGGGAGTAAAAACGATCCAC 59.586 50.000 0.00 0.00 44.67 4.02
2670 3218 2.037511 ACACGGGAGTAAAAACGATCCA 59.962 45.455 0.00 0.00 44.67 3.41
2671 3219 2.691927 ACACGGGAGTAAAAACGATCC 58.308 47.619 0.00 0.00 44.67 3.36
2672 3220 4.488879 ACTACACGGGAGTAAAAACGATC 58.511 43.478 0.00 0.00 44.67 3.69
2673 3221 4.219288 AGACTACACGGGAGTAAAAACGAT 59.781 41.667 0.00 0.00 44.67 3.73
2674 3222 3.569701 AGACTACACGGGAGTAAAAACGA 59.430 43.478 0.00 0.00 44.67 3.85
2675 3223 3.905784 AGACTACACGGGAGTAAAAACG 58.094 45.455 0.00 0.00 44.67 3.60
2676 3224 5.047731 ACCTAGACTACACGGGAGTAAAAAC 60.048 44.000 0.00 0.00 44.67 2.43
2677 3225 5.079643 ACCTAGACTACACGGGAGTAAAAA 58.920 41.667 0.00 0.00 44.67 1.94
2678 3226 4.666512 ACCTAGACTACACGGGAGTAAAA 58.333 43.478 0.00 0.00 44.67 1.52
2679 3227 4.307032 ACCTAGACTACACGGGAGTAAA 57.693 45.455 0.00 0.00 44.67 2.01
2680 3228 4.018960 AGAACCTAGACTACACGGGAGTAA 60.019 45.833 0.00 0.00 44.67 2.24
2681 3229 3.521126 AGAACCTAGACTACACGGGAGTA 59.479 47.826 0.00 0.00 44.67 2.59
2683 3231 3.002038 AGAACCTAGACTACACGGGAG 57.998 52.381 0.00 0.00 0.00 4.30
2684 3232 3.446442 AAGAACCTAGACTACACGGGA 57.554 47.619 0.00 0.00 0.00 5.14
2685 3233 3.631227 CCTAAGAACCTAGACTACACGGG 59.369 52.174 0.00 0.00 0.00 5.28
2686 3234 4.268359 ACCTAAGAACCTAGACTACACGG 58.732 47.826 0.00 0.00 0.00 4.94
2687 3235 5.182760 ACAACCTAAGAACCTAGACTACACG 59.817 44.000 0.00 0.00 0.00 4.49
2688 3236 6.587206 ACAACCTAAGAACCTAGACTACAC 57.413 41.667 0.00 0.00 0.00 2.90
2689 3237 6.779049 TGAACAACCTAAGAACCTAGACTACA 59.221 38.462 0.00 0.00 0.00 2.74
2690 3238 7.224522 TGAACAACCTAAGAACCTAGACTAC 57.775 40.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.