Multiple sequence alignment - TraesCS2A01G195500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G195500 chr2A 100.000 3290 0 0 1 3290 165242801 165239512 0.000000e+00 6076.0
1 TraesCS2A01G195500 chr2D 89.300 2028 126 43 673 2678 136465852 136467810 0.000000e+00 2459.0
2 TraesCS2A01G195500 chr2B 89.052 1224 88 18 1190 2408 194857770 194858952 0.000000e+00 1476.0
3 TraesCS2A01G195500 chr2B 83.374 1221 93 41 1 1164 194856368 194857535 0.000000e+00 1029.0
4 TraesCS2A01G195500 chr2B 93.043 115 5 1 701 815 194854809 194854920 7.300000e-37 165.0
5 TraesCS2A01G195500 chr4A 89.267 559 44 8 1467 2024 724018015 724017472 0.000000e+00 686.0
6 TraesCS2A01G195500 chr5B 91.244 434 32 2 1447 1880 455764080 455763653 1.320000e-163 586.0
7 TraesCS2A01G195500 chr5B 92.145 331 23 1 1694 2024 476909090 476909417 6.430000e-127 464.0
8 TraesCS2A01G195500 chr5B 90.909 99 3 1 1932 2024 455763646 455763548 9.580000e-26 128.0
9 TraesCS2A01G195500 chr7A 89.810 422 30 4 1467 1887 735088797 735089206 2.250000e-146 529.0
10 TraesCS2A01G195500 chr7A 90.071 141 11 1 1882 2022 735108392 735108529 2.610000e-41 180.0
11 TraesCS2A01G195500 chr7A 100.000 28 0 0 10 37 730405699 730405726 6.000000e-03 52.8
12 TraesCS2A01G195500 chr1D 80.000 100 14 2 2516 2609 18579423 18579522 5.890000e-08 69.4
13 TraesCS2A01G195500 chr1D 86.538 52 4 2 12 63 321711269 321711221 2.000000e-03 54.7
14 TraesCS2A01G195500 chr4B 93.023 43 1 2 16 57 654570378 654570337 9.860000e-06 62.1
15 TraesCS2A01G195500 chr1B 86.538 52 4 2 12 63 434430586 434430538 2.000000e-03 54.7
16 TraesCS2A01G195500 chr5D 100.000 28 0 0 12 39 548018868 548018895 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G195500 chr2A 165239512 165242801 3289 True 6076 6076 100.000000 1 3290 1 chr2A.!!$R1 3289
1 TraesCS2A01G195500 chr2D 136465852 136467810 1958 False 2459 2459 89.300000 673 2678 1 chr2D.!!$F1 2005
2 TraesCS2A01G195500 chr2B 194854809 194858952 4143 False 890 1476 88.489667 1 2408 3 chr2B.!!$F1 2407
3 TraesCS2A01G195500 chr4A 724017472 724018015 543 True 686 686 89.267000 1467 2024 1 chr4A.!!$R1 557
4 TraesCS2A01G195500 chr5B 455763548 455764080 532 True 357 586 91.076500 1447 2024 2 chr5B.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
936 2556 0.461339 TATCTTGCTTTCCCGACGGC 60.461 55.0 8.86 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2832 4719 0.034059 ATCATTCGGAGTGATCGGCC 59.966 55.0 9.9 0.0 30.78 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
238 1816 6.839124 TTGTATTTCCAGTTCATGAGCATT 57.161 33.333 12.41 0.00 0.00 3.56
239 1817 6.839124 TGTATTTCCAGTTCATGAGCATTT 57.161 33.333 12.41 0.00 0.00 2.32
240 1818 7.230849 TGTATTTCCAGTTCATGAGCATTTT 57.769 32.000 12.41 0.00 0.00 1.82
241 1819 7.669427 TGTATTTCCAGTTCATGAGCATTTTT 58.331 30.769 12.41 0.00 0.00 1.94
290 1868 8.081633 ACGAATGTTATTGAAACATGTGAACAT 58.918 29.630 0.00 6.42 40.43 2.71
324 1902 8.017418 TCCACAAACATATTTCCAACTTCTTT 57.983 30.769 0.00 0.00 0.00 2.52
419 1997 9.499479 TTGCATACAATGTTTAAATTCCACAAT 57.501 25.926 0.00 0.00 0.00 2.71
420 1998 9.149225 TGCATACAATGTTTAAATTCCACAATC 57.851 29.630 0.00 0.00 0.00 2.67
524 2108 7.079182 TCGTGAACAGTTTTCAAACTTACAT 57.921 32.000 2.01 0.00 46.52 2.29
640 2228 4.642445 AAATAAACCGGCCGAAATAAGG 57.358 40.909 30.73 10.69 0.00 2.69
642 2230 2.203470 AAACCGGCCGAAATAAGGAA 57.797 45.000 30.73 0.00 0.00 3.36
656 2275 7.865385 CCGAAATAAGGAAATGTTGTGAAAAGA 59.135 33.333 0.00 0.00 0.00 2.52
735 2355 0.534203 GCCCTCGGAACAGAACAACA 60.534 55.000 0.00 0.00 0.00 3.33
736 2356 1.961793 CCCTCGGAACAGAACAACAA 58.038 50.000 0.00 0.00 0.00 2.83
737 2357 1.602377 CCCTCGGAACAGAACAACAAC 59.398 52.381 0.00 0.00 0.00 3.32
738 2358 2.285083 CCTCGGAACAGAACAACAACA 58.715 47.619 0.00 0.00 0.00 3.33
850 2470 0.665835 CACCCGAGGAGAGAGAATCG 59.334 60.000 0.00 0.00 42.67 3.34
929 2549 5.236695 GGTAGGTTTCGATATCTTGCTTTCC 59.763 44.000 0.34 0.00 0.00 3.13
936 2556 0.461339 TATCTTGCTTTCCCGACGGC 60.461 55.000 8.86 0.00 0.00 5.68
1020 2652 2.050350 AGATCCGCCGTTCCTTCGA 61.050 57.895 0.00 0.00 0.00 3.71
1026 2658 2.677979 GCCGTTCCTTCGACTTGGC 61.678 63.158 0.00 0.00 0.00 4.52
1142 2774 2.264794 GCGTCCTCCGTCCACATT 59.735 61.111 0.00 0.00 39.32 2.71
1157 2789 1.227263 CATTCCCTCGCCAGGTACG 60.227 63.158 0.00 0.00 38.30 3.67
1214 3055 2.650322 TGGTTTTGCTCCGTTTCTCTT 58.350 42.857 0.00 0.00 0.00 2.85
1232 3073 5.072741 TCTCTTTGATCTTTCTTTGGTGGG 58.927 41.667 0.00 0.00 0.00 4.61
1239 3080 2.158519 TCTTTCTTTGGTGGGGTTCCTC 60.159 50.000 0.00 0.00 0.00 3.71
1271 3112 1.815212 CGATCCTGCTGTTCGATGCG 61.815 60.000 7.20 0.00 38.22 4.73
1275 3116 1.417592 CTGCTGTTCGATGCGTCAC 59.582 57.895 6.75 0.00 0.00 3.67
1284 3125 1.202973 CGATGCGTCACGATCCTGTC 61.203 60.000 0.00 0.00 0.00 3.51
1285 3126 0.179137 GATGCGTCACGATCCTGTCA 60.179 55.000 0.00 0.00 0.00 3.58
1289 3130 1.324736 GCGTCACGATCCTGTCATTTC 59.675 52.381 0.00 0.00 0.00 2.17
1290 3131 2.606108 CGTCACGATCCTGTCATTTCA 58.394 47.619 0.00 0.00 0.00 2.69
1292 3133 3.243877 CGTCACGATCCTGTCATTTCATC 59.756 47.826 0.00 0.00 0.00 2.92
1294 3135 4.505922 GTCACGATCCTGTCATTTCATCTC 59.494 45.833 0.00 0.00 0.00 2.75
1296 3137 3.055591 CGATCCTGTCATTTCATCTCGG 58.944 50.000 0.00 0.00 0.00 4.63
1312 3153 4.019919 TCTCGGTTTATTTACGGTCTCG 57.980 45.455 0.00 0.00 43.02 4.04
1319 3160 2.121116 ATTTACGGTCTCGATCAGCG 57.879 50.000 12.94 12.94 40.58 5.18
1334 3175 0.443869 CAGCGACCAGATTGTTTCCG 59.556 55.000 0.00 0.00 0.00 4.30
1357 3198 3.200825 TCCCAGATCTGTTCAGAAATCCC 59.799 47.826 21.11 0.00 0.00 3.85
1418 3259 1.089920 ATGCACGATTCAGTTCTGCC 58.910 50.000 0.00 0.00 0.00 4.85
1419 3260 0.035317 TGCACGATTCAGTTCTGCCT 59.965 50.000 0.00 0.00 0.00 4.75
1420 3261 1.160137 GCACGATTCAGTTCTGCCTT 58.840 50.000 0.00 0.00 0.00 4.35
1474 3325 4.935885 ATTCTCACTGATTTGTTCTCGC 57.064 40.909 0.00 0.00 0.00 5.03
1480 3331 2.987149 ACTGATTTGTTCTCGCTGTACG 59.013 45.455 0.00 0.00 45.62 3.67
1779 3649 1.202557 AGGCTCTACGACCTCTACTCG 60.203 57.143 0.00 0.00 37.17 4.18
2121 4003 3.112709 GTTGGCTCGCAGTCGTCC 61.113 66.667 0.00 0.00 36.96 4.79
2169 4051 0.179119 GCTGCTGGAAATGACATGGC 60.179 55.000 0.00 0.00 0.00 4.40
2170 4052 0.099968 CTGCTGGAAATGACATGGCG 59.900 55.000 0.00 0.00 0.00 5.69
2171 4053 1.314534 TGCTGGAAATGACATGGCGG 61.315 55.000 0.00 0.00 0.00 6.13
2172 4054 1.434696 CTGGAAATGACATGGCGGC 59.565 57.895 0.00 0.00 0.00 6.53
2173 4055 1.001020 TGGAAATGACATGGCGGCT 60.001 52.632 11.43 0.00 0.00 5.52
2174 4056 1.314534 TGGAAATGACATGGCGGCTG 61.315 55.000 11.43 8.69 0.00 4.85
2175 4057 1.315257 GGAAATGACATGGCGGCTGT 61.315 55.000 11.43 12.09 0.00 4.40
2176 4058 0.179156 GAAATGACATGGCGGCTGTG 60.179 55.000 16.43 14.27 0.00 3.66
2177 4059 0.895100 AAATGACATGGCGGCTGTGT 60.895 50.000 17.63 17.63 0.00 3.72
2178 4060 1.588824 AATGACATGGCGGCTGTGTG 61.589 55.000 21.31 12.42 0.00 3.82
2179 4061 4.107051 GACATGGCGGCTGTGTGC 62.107 66.667 21.31 11.45 41.94 4.57
2186 4068 2.970974 GCGGCTGTGTGCTTCTTCC 61.971 63.158 0.00 0.00 42.39 3.46
2203 4085 2.762535 TCCTCCTTGGTTCATCGTTC 57.237 50.000 0.00 0.00 37.07 3.95
2214 4096 0.611200 TCATCGTTCGATGGTTGGGT 59.389 50.000 27.10 0.00 41.50 4.51
2250 4132 3.701532 CTAGTGCTACTAGTGTGGAGC 57.298 52.381 5.39 7.05 42.41 4.70
2322 4204 7.786178 TGATAATCCGATTCGTTGATTTCTT 57.214 32.000 13.34 3.27 31.55 2.52
2331 4213 2.036217 CGTTGATTTCTTGTGTGCGTG 58.964 47.619 0.00 0.00 0.00 5.34
2334 4216 3.773860 TGATTTCTTGTGTGCGTGTTT 57.226 38.095 0.00 0.00 0.00 2.83
2362 4244 5.308825 ACAGAATCTGATAATTTAGGGCGG 58.691 41.667 18.20 0.00 35.18 6.13
2369 4251 5.530915 TCTGATAATTTAGGGCGGTGATTTG 59.469 40.000 0.00 0.00 0.00 2.32
2389 4271 3.411446 TGTTCTTGACGAATGAGGCAAT 58.589 40.909 0.00 0.00 33.45 3.56
2415 4297 3.742385 CAGGCAAATTGGTTGATTGGTT 58.258 40.909 0.00 0.00 39.87 3.67
2416 4298 3.747529 CAGGCAAATTGGTTGATTGGTTC 59.252 43.478 0.00 0.00 39.87 3.62
2417 4299 3.390639 AGGCAAATTGGTTGATTGGTTCA 59.609 39.130 0.00 0.00 39.87 3.18
2418 4300 3.747529 GGCAAATTGGTTGATTGGTTCAG 59.252 43.478 0.00 0.00 39.87 3.02
2419 4301 4.379652 GCAAATTGGTTGATTGGTTCAGT 58.620 39.130 0.00 0.00 39.87 3.41
2420 4302 5.510520 GGCAAATTGGTTGATTGGTTCAGTA 60.511 40.000 0.00 0.00 39.87 2.74
2421 4303 5.405269 GCAAATTGGTTGATTGGTTCAGTAC 59.595 40.000 0.00 0.00 39.87 2.73
2422 4304 6.738453 GCAAATTGGTTGATTGGTTCAGTACT 60.738 38.462 0.00 0.00 39.87 2.73
2439 4321 2.348411 ACTTCAGTTTGTGAGGTGGG 57.652 50.000 0.00 0.00 43.60 4.61
2441 4323 0.257328 TTCAGTTTGTGAGGTGGGCA 59.743 50.000 0.00 0.00 36.21 5.36
2442 4324 0.257328 TCAGTTTGTGAGGTGGGCAA 59.743 50.000 0.00 0.00 0.00 4.52
2455 4337 2.644992 GGCAACTTGGAACGCCAG 59.355 61.111 0.00 0.00 46.91 4.85
2460 4342 0.400213 AACTTGGAACGCCAGGATCA 59.600 50.000 0.80 0.00 46.91 2.92
2461 4343 0.400213 ACTTGGAACGCCAGGATCAA 59.600 50.000 0.80 0.00 46.91 2.57
2462 4344 1.004745 ACTTGGAACGCCAGGATCAAT 59.995 47.619 0.80 0.00 46.91 2.57
2481 4363 1.100510 TAACCATGTCTCGTCCTCCG 58.899 55.000 0.00 0.00 38.13 4.63
2483 4365 1.313812 ACCATGTCTCGTCCTCCGTC 61.314 60.000 0.00 0.00 37.94 4.79
2488 4370 1.740664 TCTCGTCCTCCGTCAGTCG 60.741 63.158 0.00 0.00 37.94 4.18
2500 4382 1.662026 CGTCAGTCGATCACGTGTTCA 60.662 52.381 22.73 10.03 42.86 3.18
2508 4391 4.857588 GTCGATCACGTGTTCAATAGACTT 59.142 41.667 22.73 0.00 40.69 3.01
2509 4392 5.345202 GTCGATCACGTGTTCAATAGACTTT 59.655 40.000 22.73 0.00 40.69 2.66
2512 4395 6.089551 CGATCACGTGTTCAATAGACTTTCTT 59.910 38.462 22.73 0.00 34.56 2.52
2519 4402 6.590292 GTGTTCAATAGACTTTCTTCATCCGA 59.410 38.462 0.00 0.00 0.00 4.55
2525 4408 9.922305 CAATAGACTTTCTTCATCCGAAAATAC 57.078 33.333 0.00 0.00 30.73 1.89
2526 4409 6.986904 AGACTTTCTTCATCCGAAAATACC 57.013 37.500 0.00 0.00 30.73 2.73
2530 4413 6.371825 ACTTTCTTCATCCGAAAATACCTGTC 59.628 38.462 0.00 0.00 30.73 3.51
2609 4492 4.021719 TCGACAAGTATTTTCGAAGGGAGT 60.022 41.667 0.00 0.00 38.77 3.85
2614 4501 7.391620 ACAAGTATTTTCGAAGGGAGTATCAA 58.608 34.615 0.00 0.00 36.25 2.57
2623 4510 3.618690 AGGGAGTATCAAAGAGCACAC 57.381 47.619 0.00 0.00 36.25 3.82
2627 4514 4.319177 GGAGTATCAAAGAGCACACAAGT 58.681 43.478 0.00 0.00 36.25 3.16
2632 4519 4.251543 TCAAAGAGCACACAAGTATCGA 57.748 40.909 0.00 0.00 0.00 3.59
2639 4526 0.606604 ACACAAGTATCGAAGGCGGT 59.393 50.000 0.00 0.00 38.28 5.68
2645 4532 2.055633 TATCGAAGGCGGTGGCTCA 61.056 57.895 0.00 0.00 37.50 4.26
2646 4533 2.292794 TATCGAAGGCGGTGGCTCAC 62.293 60.000 0.00 0.00 37.50 3.51
2653 4540 2.047274 CGGTGGCTCACGGTCATT 60.047 61.111 5.20 0.00 34.83 2.57
2657 4544 0.889186 GTGGCTCACGGTCATTGGTT 60.889 55.000 0.00 0.00 0.00 3.67
2666 4553 1.676006 CGGTCATTGGTTCATAAGGCC 59.324 52.381 0.00 0.00 0.00 5.19
2711 4598 3.077556 CCTCCTCCAGGTCCCGTG 61.078 72.222 0.00 0.00 37.53 4.94
2712 4599 2.283966 CTCCTCCAGGTCCCGTGT 60.284 66.667 0.00 0.00 36.34 4.49
2713 4600 2.283676 TCCTCCAGGTCCCGTGTC 60.284 66.667 0.00 0.00 36.34 3.67
2714 4601 3.760035 CCTCCAGGTCCCGTGTCG 61.760 72.222 0.00 0.00 0.00 4.35
2724 4611 2.660206 CCGTGTCGGGACAATGGA 59.340 61.111 13.35 0.00 44.15 3.41
2725 4612 1.004320 CCGTGTCGGGACAATGGAA 60.004 57.895 13.35 0.00 44.15 3.53
2726 4613 1.296056 CCGTGTCGGGACAATGGAAC 61.296 60.000 13.35 0.00 44.15 3.62
2727 4614 1.623081 CGTGTCGGGACAATGGAACG 61.623 60.000 2.58 0.00 43.77 3.95
2728 4615 1.004320 TGTCGGGACAATGGAACGG 60.004 57.895 0.00 0.00 38.56 4.44
2729 4616 1.743995 GTCGGGACAATGGAACGGG 60.744 63.158 0.00 0.00 0.00 5.28
2730 4617 3.131478 CGGGACAATGGAACGGGC 61.131 66.667 0.00 0.00 0.00 6.13
2731 4618 2.754254 GGGACAATGGAACGGGCC 60.754 66.667 0.00 0.00 0.00 5.80
2732 4619 3.131478 GGACAATGGAACGGGCCG 61.131 66.667 27.06 27.06 0.00 6.13
2733 4620 2.046700 GACAATGGAACGGGCCGA 60.047 61.111 35.78 10.94 0.00 5.54
2734 4621 1.673009 GACAATGGAACGGGCCGAA 60.673 57.895 35.78 15.33 0.00 4.30
2735 4622 1.228306 ACAATGGAACGGGCCGAAA 60.228 52.632 35.78 14.94 0.00 3.46
2736 4623 1.211709 CAATGGAACGGGCCGAAAC 59.788 57.895 35.78 21.11 0.00 2.78
2737 4624 1.974875 AATGGAACGGGCCGAAACC 60.975 57.895 35.78 28.73 0.00 3.27
2748 4635 4.735132 CGAAACCGCGGGAGAGCA 62.735 66.667 31.76 0.00 36.85 4.26
2749 4636 2.815647 GAAACCGCGGGAGAGCAG 60.816 66.667 31.76 0.80 36.85 4.24
2757 4644 2.439156 GGGAGAGCAGCGGCAAAT 60.439 61.111 12.44 0.00 44.61 2.32
2758 4645 1.153168 GGGAGAGCAGCGGCAAATA 60.153 57.895 12.44 0.00 44.61 1.40
2759 4646 0.748005 GGGAGAGCAGCGGCAAATAA 60.748 55.000 12.44 0.00 44.61 1.40
2760 4647 1.094785 GGAGAGCAGCGGCAAATAAA 58.905 50.000 12.44 0.00 44.61 1.40
2761 4648 1.678101 GGAGAGCAGCGGCAAATAAAT 59.322 47.619 12.44 0.00 44.61 1.40
2762 4649 2.099756 GGAGAGCAGCGGCAAATAAATT 59.900 45.455 12.44 0.00 44.61 1.82
2763 4650 3.429410 GGAGAGCAGCGGCAAATAAATTT 60.429 43.478 12.44 0.00 44.61 1.82
2779 4666 7.403312 AATAAATTTGATGACCGTCATTGGA 57.597 32.000 15.20 5.05 37.20 3.53
2780 4667 4.701956 AATTTGATGACCGTCATTGGAC 57.298 40.909 15.20 3.52 37.20 4.02
2781 4668 2.849294 TTGATGACCGTCATTGGACA 57.151 45.000 15.20 6.06 44.54 4.02
2782 4669 2.849294 TGATGACCGTCATTGGACAA 57.151 45.000 15.20 0.00 44.54 3.18
2783 4670 2.422597 TGATGACCGTCATTGGACAAC 58.577 47.619 15.20 1.81 44.54 3.32
2784 4671 1.737793 GATGACCGTCATTGGACAACC 59.262 52.381 15.20 0.00 44.54 3.77
2785 4672 0.470341 TGACCGTCATTGGACAACCA 59.530 50.000 0.00 0.00 44.54 3.67
2798 4685 5.885449 TGGACAACCAAAAATTTCCAGAT 57.115 34.783 0.00 0.00 43.91 2.90
2799 4686 5.852827 TGGACAACCAAAAATTTCCAGATC 58.147 37.500 0.00 0.00 43.91 2.75
2800 4687 5.365025 TGGACAACCAAAAATTTCCAGATCA 59.635 36.000 0.00 0.00 43.91 2.92
2801 4688 6.043012 TGGACAACCAAAAATTTCCAGATCAT 59.957 34.615 0.00 0.00 43.91 2.45
2802 4689 6.936335 GGACAACCAAAAATTTCCAGATCATT 59.064 34.615 0.00 0.00 35.97 2.57
2803 4690 7.095102 GGACAACCAAAAATTTCCAGATCATTG 60.095 37.037 0.00 0.00 35.97 2.82
2804 4691 7.507829 ACAACCAAAAATTTCCAGATCATTGA 58.492 30.769 0.00 0.00 0.00 2.57
2805 4692 7.658575 ACAACCAAAAATTTCCAGATCATTGAG 59.341 33.333 0.00 0.00 0.00 3.02
2806 4693 7.307131 ACCAAAAATTTCCAGATCATTGAGT 57.693 32.000 0.00 0.00 0.00 3.41
2807 4694 7.738847 ACCAAAAATTTCCAGATCATTGAGTT 58.261 30.769 0.00 0.00 0.00 3.01
2808 4695 8.212995 ACCAAAAATTTCCAGATCATTGAGTTT 58.787 29.630 0.00 0.00 0.00 2.66
2809 4696 8.500773 CCAAAAATTTCCAGATCATTGAGTTTG 58.499 33.333 0.00 0.00 0.00 2.93
2810 4697 7.662604 AAAATTTCCAGATCATTGAGTTTGC 57.337 32.000 0.00 0.00 0.00 3.68
2811 4698 4.789012 TTTCCAGATCATTGAGTTTGCC 57.211 40.909 0.00 0.00 0.00 4.52
2812 4699 3.726557 TCCAGATCATTGAGTTTGCCT 57.273 42.857 0.00 0.00 0.00 4.75
2813 4700 4.038271 TCCAGATCATTGAGTTTGCCTT 57.962 40.909 0.00 0.00 0.00 4.35
2814 4701 5.178096 TCCAGATCATTGAGTTTGCCTTA 57.822 39.130 0.00 0.00 0.00 2.69
2815 4702 5.569355 TCCAGATCATTGAGTTTGCCTTAA 58.431 37.500 0.00 0.00 0.00 1.85
2816 4703 6.009589 TCCAGATCATTGAGTTTGCCTTAAA 58.990 36.000 0.00 0.00 0.00 1.52
2817 4704 6.151648 TCCAGATCATTGAGTTTGCCTTAAAG 59.848 38.462 0.00 0.00 0.00 1.85
2818 4705 6.071728 CCAGATCATTGAGTTTGCCTTAAAGT 60.072 38.462 0.00 0.00 34.65 2.66
2819 4706 7.373493 CAGATCATTGAGTTTGCCTTAAAGTT 58.627 34.615 0.00 0.00 32.13 2.66
2820 4707 7.327761 CAGATCATTGAGTTTGCCTTAAAGTTG 59.672 37.037 0.00 0.00 32.13 3.16
2821 4708 6.463995 TCATTGAGTTTGCCTTAAAGTTGT 57.536 33.333 0.00 0.00 32.13 3.32
2822 4709 6.503524 TCATTGAGTTTGCCTTAAAGTTGTC 58.496 36.000 0.00 0.00 32.13 3.18
2823 4710 4.911514 TGAGTTTGCCTTAAAGTTGTCC 57.088 40.909 0.00 0.00 32.13 4.02
2824 4711 4.532834 TGAGTTTGCCTTAAAGTTGTCCT 58.467 39.130 0.00 0.00 32.13 3.85
2825 4712 4.953579 TGAGTTTGCCTTAAAGTTGTCCTT 59.046 37.500 0.00 0.00 32.13 3.36
2826 4713 5.420739 TGAGTTTGCCTTAAAGTTGTCCTTT 59.579 36.000 0.00 0.00 45.36 3.11
2827 4714 6.071051 TGAGTTTGCCTTAAAGTTGTCCTTTT 60.071 34.615 0.00 0.00 40.55 2.27
2828 4715 6.338146 AGTTTGCCTTAAAGTTGTCCTTTTC 58.662 36.000 0.00 0.00 40.55 2.29
2829 4716 5.923733 TTGCCTTAAAGTTGTCCTTTTCA 57.076 34.783 0.00 0.00 40.55 2.69
2830 4717 5.923733 TGCCTTAAAGTTGTCCTTTTCAA 57.076 34.783 0.00 0.00 40.55 2.69
2831 4718 6.287589 TGCCTTAAAGTTGTCCTTTTCAAA 57.712 33.333 0.00 0.00 40.55 2.69
2832 4719 6.337356 TGCCTTAAAGTTGTCCTTTTCAAAG 58.663 36.000 0.00 0.00 40.55 2.77
2843 4730 3.477899 CTTTTCAAAGGCCGATCACTC 57.522 47.619 0.00 0.00 32.40 3.51
2844 4731 1.821216 TTTCAAAGGCCGATCACTCC 58.179 50.000 0.00 0.00 0.00 3.85
2845 4732 0.391130 TTCAAAGGCCGATCACTCCG 60.391 55.000 0.00 0.00 0.00 4.63
2846 4733 1.218047 CAAAGGCCGATCACTCCGA 59.782 57.895 0.00 0.00 0.00 4.55
2847 4734 0.391130 CAAAGGCCGATCACTCCGAA 60.391 55.000 0.00 0.00 0.00 4.30
2848 4735 0.541863 AAAGGCCGATCACTCCGAAT 59.458 50.000 0.00 0.00 0.00 3.34
2849 4736 0.179073 AAGGCCGATCACTCCGAATG 60.179 55.000 0.00 0.00 0.00 2.67
2850 4737 1.043116 AGGCCGATCACTCCGAATGA 61.043 55.000 0.00 0.00 0.00 2.57
2851 4738 0.034059 GGCCGATCACTCCGAATGAT 59.966 55.000 0.00 0.00 39.54 2.45
2852 4739 1.541233 GGCCGATCACTCCGAATGATT 60.541 52.381 0.00 0.00 36.92 2.57
2853 4740 2.288825 GGCCGATCACTCCGAATGATTA 60.289 50.000 0.00 0.00 36.92 1.75
2854 4741 3.390135 GCCGATCACTCCGAATGATTAA 58.610 45.455 0.00 0.00 36.92 1.40
2855 4742 3.997021 GCCGATCACTCCGAATGATTAAT 59.003 43.478 0.00 0.00 36.92 1.40
2856 4743 5.168569 GCCGATCACTCCGAATGATTAATA 58.831 41.667 0.00 0.00 36.92 0.98
2857 4744 5.289675 GCCGATCACTCCGAATGATTAATAG 59.710 44.000 0.00 0.00 36.92 1.73
2858 4745 6.621613 CCGATCACTCCGAATGATTAATAGA 58.378 40.000 0.00 0.00 36.92 1.98
2859 4746 6.749578 CCGATCACTCCGAATGATTAATAGAG 59.250 42.308 0.00 0.00 36.92 2.43
2860 4747 6.252441 CGATCACTCCGAATGATTAATAGAGC 59.748 42.308 0.00 0.00 36.92 4.09
2861 4748 6.405278 TCACTCCGAATGATTAATAGAGCA 57.595 37.500 0.00 0.00 0.00 4.26
2862 4749 6.216569 TCACTCCGAATGATTAATAGAGCAC 58.783 40.000 0.00 0.00 0.00 4.40
2863 4750 5.117745 CACTCCGAATGATTAATAGAGCACG 59.882 44.000 0.00 0.00 0.00 5.34
2864 4751 5.009710 ACTCCGAATGATTAATAGAGCACGA 59.990 40.000 0.00 0.00 0.00 4.35
2865 4752 5.461526 TCCGAATGATTAATAGAGCACGAG 58.538 41.667 0.00 0.00 0.00 4.18
2866 4753 4.090642 CCGAATGATTAATAGAGCACGAGC 59.909 45.833 0.00 0.00 42.56 5.03
2883 4770 4.303257 CTCAAGGGAGCCCGTTTC 57.697 61.111 0.00 0.00 41.95 2.78
2884 4771 1.374947 CTCAAGGGAGCCCGTTTCA 59.625 57.895 0.00 0.00 41.95 2.69
2885 4772 0.250727 CTCAAGGGAGCCCGTTTCAA 60.251 55.000 0.00 0.00 41.95 2.69
2886 4773 0.183971 TCAAGGGAGCCCGTTTCAAA 59.816 50.000 0.00 0.00 41.95 2.69
2887 4774 1.036707 CAAGGGAGCCCGTTTCAAAA 58.963 50.000 0.00 0.00 41.95 2.44
2888 4775 1.410882 CAAGGGAGCCCGTTTCAAAAA 59.589 47.619 0.00 0.00 41.95 1.94
2889 4776 2.009681 AGGGAGCCCGTTTCAAAAAT 57.990 45.000 0.00 0.00 41.95 1.82
2890 4777 3.163616 AGGGAGCCCGTTTCAAAAATA 57.836 42.857 0.00 0.00 41.95 1.40
2891 4778 3.708451 AGGGAGCCCGTTTCAAAAATAT 58.292 40.909 0.00 0.00 41.95 1.28
2892 4779 3.699538 AGGGAGCCCGTTTCAAAAATATC 59.300 43.478 0.00 0.00 41.95 1.63
2893 4780 3.445805 GGGAGCCCGTTTCAAAAATATCA 59.554 43.478 0.00 0.00 0.00 2.15
2894 4781 4.099419 GGGAGCCCGTTTCAAAAATATCAT 59.901 41.667 0.00 0.00 0.00 2.45
2895 4782 5.300792 GGGAGCCCGTTTCAAAAATATCATA 59.699 40.000 0.00 0.00 0.00 2.15
2896 4783 6.015434 GGGAGCCCGTTTCAAAAATATCATAT 60.015 38.462 0.00 0.00 0.00 1.78
2897 4784 7.433680 GGAGCCCGTTTCAAAAATATCATATT 58.566 34.615 0.00 0.00 0.00 1.28
2898 4785 7.926018 GGAGCCCGTTTCAAAAATATCATATTT 59.074 33.333 0.00 0.00 0.00 1.40
2899 4786 9.313118 GAGCCCGTTTCAAAAATATCATATTTT 57.687 29.630 9.27 9.27 33.12 1.82
2900 4787 9.313118 AGCCCGTTTCAAAAATATCATATTTTC 57.687 29.630 14.52 2.99 31.53 2.29
2901 4788 9.092876 GCCCGTTTCAAAAATATCATATTTTCA 57.907 29.630 14.52 3.74 31.53 2.69
3003 4890 9.435688 TGGATGCATACATACAGAAATACATAC 57.564 33.333 7.78 0.00 42.46 2.39
3004 4891 9.435688 GGATGCATACATACAGAAATACATACA 57.564 33.333 3.28 0.00 37.06 2.29
3028 4915 9.777297 ACATACATACATACAGAAATACATGCA 57.223 29.630 0.00 0.00 0.00 3.96
3031 4918 8.907222 ACATACATACAGAAATACATGCATGA 57.093 30.769 32.75 16.49 30.21 3.07
3032 4919 9.341078 ACATACATACAGAAATACATGCATGAA 57.659 29.630 32.75 6.78 30.21 2.57
3069 4956 9.220767 ACAGAAATACAGAATAAGTTTCCTGAC 57.779 33.333 0.00 0.00 31.02 3.51
3070 4957 9.219603 CAGAAATACAGAATAAGTTTCCTGACA 57.780 33.333 0.00 0.00 31.02 3.58
3071 4958 9.965902 AGAAATACAGAATAAGTTTCCTGACAT 57.034 29.630 0.00 0.00 31.02 3.06
3074 4961 8.894768 ATACAGAATAAGTTTCCTGACATAGC 57.105 34.615 0.00 0.00 0.00 2.97
3075 4962 5.812642 ACAGAATAAGTTTCCTGACATAGCG 59.187 40.000 0.00 0.00 0.00 4.26
3076 4963 4.811557 AGAATAAGTTTCCTGACATAGCGC 59.188 41.667 0.00 0.00 0.00 5.92
3077 4964 2.472695 AAGTTTCCTGACATAGCGCA 57.527 45.000 11.47 0.00 0.00 6.09
3078 4965 2.472695 AGTTTCCTGACATAGCGCAA 57.527 45.000 11.47 0.00 0.00 4.85
3079 4966 2.778299 AGTTTCCTGACATAGCGCAAA 58.222 42.857 11.47 0.00 0.00 3.68
3080 4967 3.146066 AGTTTCCTGACATAGCGCAAAA 58.854 40.909 11.47 0.00 0.00 2.44
3081 4968 3.758554 AGTTTCCTGACATAGCGCAAAAT 59.241 39.130 11.47 0.00 0.00 1.82
3082 4969 4.218417 AGTTTCCTGACATAGCGCAAAATT 59.782 37.500 11.47 0.00 0.00 1.82
3083 4970 5.414454 AGTTTCCTGACATAGCGCAAAATTA 59.586 36.000 11.47 0.00 0.00 1.40
3084 4971 5.484173 TTCCTGACATAGCGCAAAATTAG 57.516 39.130 11.47 0.51 0.00 1.73
3085 4972 3.312421 TCCTGACATAGCGCAAAATTAGC 59.688 43.478 11.47 0.00 0.00 3.09
3086 4973 3.548818 CCTGACATAGCGCAAAATTAGCC 60.549 47.826 11.47 0.00 0.00 3.93
3087 4974 3.013219 TGACATAGCGCAAAATTAGCCA 58.987 40.909 11.47 0.00 0.00 4.75
3088 4975 3.441922 TGACATAGCGCAAAATTAGCCAA 59.558 39.130 11.47 0.00 0.00 4.52
3089 4976 3.769536 ACATAGCGCAAAATTAGCCAAC 58.230 40.909 11.47 0.00 0.00 3.77
3090 4977 3.443681 ACATAGCGCAAAATTAGCCAACT 59.556 39.130 11.47 0.00 0.00 3.16
3091 4978 4.638421 ACATAGCGCAAAATTAGCCAACTA 59.362 37.500 11.47 0.00 0.00 2.24
3092 4979 3.487563 AGCGCAAAATTAGCCAACTAC 57.512 42.857 11.47 0.00 0.00 2.73
3093 4980 2.817258 AGCGCAAAATTAGCCAACTACA 59.183 40.909 11.47 0.00 0.00 2.74
3094 4981 3.443681 AGCGCAAAATTAGCCAACTACAT 59.556 39.130 11.47 0.00 0.00 2.29
3095 4982 4.638421 AGCGCAAAATTAGCCAACTACATA 59.362 37.500 11.47 0.00 0.00 2.29
3096 4983 4.733405 GCGCAAAATTAGCCAACTACATAC 59.267 41.667 0.30 0.00 0.00 2.39
3097 4984 5.675071 GCGCAAAATTAGCCAACTACATACA 60.675 40.000 0.30 0.00 0.00 2.29
3098 4985 6.494842 CGCAAAATTAGCCAACTACATACAT 58.505 36.000 0.00 0.00 0.00 2.29
3099 4986 6.414694 CGCAAAATTAGCCAACTACATACATG 59.585 38.462 0.00 0.00 0.00 3.21
3100 4987 7.479980 GCAAAATTAGCCAACTACATACATGA 58.520 34.615 0.00 0.00 0.00 3.07
3101 4988 7.973388 GCAAAATTAGCCAACTACATACATGAA 59.027 33.333 0.00 0.00 0.00 2.57
3102 4989 9.853555 CAAAATTAGCCAACTACATACATGAAA 57.146 29.630 0.00 0.00 0.00 2.69
3106 4993 6.455360 AGCCAACTACATACATGAAAATGG 57.545 37.500 0.00 0.00 0.00 3.16
3107 4994 5.360714 AGCCAACTACATACATGAAAATGGG 59.639 40.000 0.00 1.35 0.00 4.00
3108 4995 5.591099 CCAACTACATACATGAAAATGGGC 58.409 41.667 0.00 0.00 0.00 5.36
3109 4996 5.451798 CCAACTACATACATGAAAATGGGCC 60.452 44.000 0.00 0.00 0.00 5.80
3110 4997 4.865905 ACTACATACATGAAAATGGGCCA 58.134 39.130 9.61 9.61 0.00 5.36
3111 4998 5.268387 ACTACATACATGAAAATGGGCCAA 58.732 37.500 11.89 0.00 0.00 4.52
3112 4999 5.898972 ACTACATACATGAAAATGGGCCAAT 59.101 36.000 11.89 0.00 0.00 3.16
3113 5000 5.697082 ACATACATGAAAATGGGCCAATT 57.303 34.783 11.89 5.35 0.00 2.32
3114 5001 6.064735 ACATACATGAAAATGGGCCAATTT 57.935 33.333 19.20 19.20 0.00 1.82
3115 5002 6.483405 ACATACATGAAAATGGGCCAATTTT 58.517 32.000 27.69 27.69 41.34 1.82
3116 5003 6.947158 ACATACATGAAAATGGGCCAATTTTT 59.053 30.769 27.92 17.80 39.31 1.94
3137 5024 5.407407 TTTTTGTTTGTTAGTTGCTGGGA 57.593 34.783 0.00 0.00 0.00 4.37
3138 5025 5.606348 TTTTGTTTGTTAGTTGCTGGGAT 57.394 34.783 0.00 0.00 0.00 3.85
3139 5026 5.606348 TTTGTTTGTTAGTTGCTGGGATT 57.394 34.783 0.00 0.00 0.00 3.01
3140 5027 5.606348 TTGTTTGTTAGTTGCTGGGATTT 57.394 34.783 0.00 0.00 0.00 2.17
3141 5028 5.606348 TGTTTGTTAGTTGCTGGGATTTT 57.394 34.783 0.00 0.00 0.00 1.82
3142 5029 5.596845 TGTTTGTTAGTTGCTGGGATTTTC 58.403 37.500 0.00 0.00 0.00 2.29
3143 5030 5.362430 TGTTTGTTAGTTGCTGGGATTTTCT 59.638 36.000 0.00 0.00 0.00 2.52
3144 5031 6.127196 TGTTTGTTAGTTGCTGGGATTTTCTT 60.127 34.615 0.00 0.00 0.00 2.52
3145 5032 6.478512 TTGTTAGTTGCTGGGATTTTCTTT 57.521 33.333 0.00 0.00 0.00 2.52
3146 5033 6.478512 TGTTAGTTGCTGGGATTTTCTTTT 57.521 33.333 0.00 0.00 0.00 2.27
3147 5034 6.279882 TGTTAGTTGCTGGGATTTTCTTTTG 58.720 36.000 0.00 0.00 0.00 2.44
3148 5035 6.127196 TGTTAGTTGCTGGGATTTTCTTTTGT 60.127 34.615 0.00 0.00 0.00 2.83
3149 5036 5.357742 AGTTGCTGGGATTTTCTTTTGTT 57.642 34.783 0.00 0.00 0.00 2.83
3150 5037 5.744171 AGTTGCTGGGATTTTCTTTTGTTT 58.256 33.333 0.00 0.00 0.00 2.83
3151 5038 6.179756 AGTTGCTGGGATTTTCTTTTGTTTT 58.820 32.000 0.00 0.00 0.00 2.43
3152 5039 6.658816 AGTTGCTGGGATTTTCTTTTGTTTTT 59.341 30.769 0.00 0.00 0.00 1.94
3153 5040 6.434018 TGCTGGGATTTTCTTTTGTTTTTG 57.566 33.333 0.00 0.00 0.00 2.44
3154 5041 5.163673 TGCTGGGATTTTCTTTTGTTTTTGC 60.164 36.000 0.00 0.00 0.00 3.68
3155 5042 5.163673 GCTGGGATTTTCTTTTGTTTTTGCA 60.164 36.000 0.00 0.00 0.00 4.08
3156 5043 6.188400 TGGGATTTTCTTTTGTTTTTGCAC 57.812 33.333 0.00 0.00 0.00 4.57
3157 5044 5.707298 TGGGATTTTCTTTTGTTTTTGCACA 59.293 32.000 0.00 0.00 0.00 4.57
3158 5045 6.027131 GGGATTTTCTTTTGTTTTTGCACAC 58.973 36.000 0.00 0.00 0.00 3.82
3159 5046 6.027131 GGATTTTCTTTTGTTTTTGCACACC 58.973 36.000 0.00 0.00 0.00 4.16
3160 5047 6.128035 GGATTTTCTTTTGTTTTTGCACACCT 60.128 34.615 0.00 0.00 0.00 4.00
3161 5048 6.625873 TTTTCTTTTGTTTTTGCACACCTT 57.374 29.167 0.00 0.00 0.00 3.50
3162 5049 5.604010 TTCTTTTGTTTTTGCACACCTTG 57.396 34.783 0.00 0.00 0.00 3.61
3178 5065 7.087409 CACACCTTGCAAATCATAATACTCA 57.913 36.000 0.00 0.00 0.00 3.41
3179 5066 6.968904 CACACCTTGCAAATCATAATACTCAC 59.031 38.462 0.00 0.00 0.00 3.51
3180 5067 6.886459 ACACCTTGCAAATCATAATACTCACT 59.114 34.615 0.00 0.00 0.00 3.41
3181 5068 7.394359 ACACCTTGCAAATCATAATACTCACTT 59.606 33.333 0.00 0.00 0.00 3.16
3182 5069 7.912250 CACCTTGCAAATCATAATACTCACTTC 59.088 37.037 0.00 0.00 0.00 3.01
3183 5070 7.128331 CCTTGCAAATCATAATACTCACTTCG 58.872 38.462 0.00 0.00 0.00 3.79
3184 5071 7.201644 CCTTGCAAATCATAATACTCACTTCGT 60.202 37.037 0.00 0.00 0.00 3.85
3185 5072 7.234187 TGCAAATCATAATACTCACTTCGTC 57.766 36.000 0.00 0.00 0.00 4.20
3186 5073 6.257849 TGCAAATCATAATACTCACTTCGTCC 59.742 38.462 0.00 0.00 0.00 4.79
3187 5074 6.562270 GCAAATCATAATACTCACTTCGTCCG 60.562 42.308 0.00 0.00 0.00 4.79
3188 5075 4.563337 TCATAATACTCACTTCGTCCGG 57.437 45.455 0.00 0.00 0.00 5.14
3189 5076 4.201657 TCATAATACTCACTTCGTCCGGA 58.798 43.478 0.00 0.00 0.00 5.14
3190 5077 4.641541 TCATAATACTCACTTCGTCCGGAA 59.358 41.667 5.23 0.00 0.00 4.30
3191 5078 5.301045 TCATAATACTCACTTCGTCCGGAAT 59.699 40.000 5.23 0.00 33.26 3.01
3192 5079 4.467198 AATACTCACTTCGTCCGGAATT 57.533 40.909 5.23 0.00 33.26 2.17
3193 5080 5.587388 AATACTCACTTCGTCCGGAATTA 57.413 39.130 5.23 0.00 33.26 1.40
3194 5081 3.227810 ACTCACTTCGTCCGGAATTAC 57.772 47.619 5.23 0.00 33.26 1.89
3195 5082 2.824341 ACTCACTTCGTCCGGAATTACT 59.176 45.455 5.23 0.00 33.26 2.24
3196 5083 3.257624 ACTCACTTCGTCCGGAATTACTT 59.742 43.478 5.23 0.00 33.26 2.24
3197 5084 4.460382 ACTCACTTCGTCCGGAATTACTTA 59.540 41.667 5.23 0.00 33.26 2.24
3198 5085 4.737054 TCACTTCGTCCGGAATTACTTAC 58.263 43.478 5.23 0.00 33.26 2.34
3199 5086 4.460382 TCACTTCGTCCGGAATTACTTACT 59.540 41.667 5.23 0.00 33.26 2.24
3200 5087 4.561606 CACTTCGTCCGGAATTACTTACTG 59.438 45.833 5.23 0.00 33.26 2.74
3201 5088 3.155093 TCGTCCGGAATTACTTACTGC 57.845 47.619 5.23 0.00 0.00 4.40
3202 5089 1.850441 CGTCCGGAATTACTTACTGCG 59.150 52.381 5.23 0.00 0.00 5.18
3203 5090 2.199236 GTCCGGAATTACTTACTGCGG 58.801 52.381 5.23 0.00 44.52 5.69
3204 5091 2.589798 CCGGAATTACTTACTGCGGA 57.410 50.000 0.00 0.00 45.86 5.54
3205 5092 2.896168 CCGGAATTACTTACTGCGGAA 58.104 47.619 0.00 0.00 45.86 4.30
3206 5093 3.264104 CCGGAATTACTTACTGCGGAAA 58.736 45.455 0.00 0.00 45.86 3.13
3207 5094 3.875134 CCGGAATTACTTACTGCGGAAAT 59.125 43.478 0.00 0.00 45.86 2.17
3208 5095 4.260620 CCGGAATTACTTACTGCGGAAATG 60.261 45.833 0.00 0.00 45.86 2.32
3209 5096 4.331717 CGGAATTACTTACTGCGGAAATGT 59.668 41.667 0.00 0.00 0.00 2.71
3210 5097 5.521010 CGGAATTACTTACTGCGGAAATGTA 59.479 40.000 0.00 0.00 0.00 2.29
3211 5098 6.202188 CGGAATTACTTACTGCGGAAATGTAT 59.798 38.462 0.00 0.00 0.00 2.29
3212 5099 7.383029 CGGAATTACTTACTGCGGAAATGTATA 59.617 37.037 0.00 0.00 0.00 1.47
3213 5100 9.048446 GGAATTACTTACTGCGGAAATGTATAA 57.952 33.333 0.00 0.00 0.00 0.98
3219 5106 8.188139 ACTTACTGCGGAAATGTATAAAAATGG 58.812 33.333 0.00 0.00 0.00 3.16
3220 5107 6.767524 ACTGCGGAAATGTATAAAAATGGA 57.232 33.333 0.00 0.00 0.00 3.41
3221 5108 7.346751 ACTGCGGAAATGTATAAAAATGGAT 57.653 32.000 0.00 0.00 0.00 3.41
3222 5109 7.202526 ACTGCGGAAATGTATAAAAATGGATG 58.797 34.615 0.00 0.00 0.00 3.51
3223 5110 7.106439 TGCGGAAATGTATAAAAATGGATGT 57.894 32.000 0.00 0.00 0.00 3.06
3224 5111 8.226819 TGCGGAAATGTATAAAAATGGATGTA 57.773 30.769 0.00 0.00 0.00 2.29
3225 5112 8.855110 TGCGGAAATGTATAAAAATGGATGTAT 58.145 29.630 0.00 0.00 0.00 2.29
3226 5113 9.691362 GCGGAAATGTATAAAAATGGATGTATT 57.309 29.630 0.00 0.00 0.00 1.89
3259 5146 9.654663 AAAGTACATCTAGACACATTAACTTCC 57.345 33.333 0.00 0.00 0.00 3.46
3260 5147 7.783042 AGTACATCTAGACACATTAACTTCCC 58.217 38.462 0.00 0.00 0.00 3.97
3261 5148 5.990668 ACATCTAGACACATTAACTTCCCC 58.009 41.667 0.00 0.00 0.00 4.81
3262 5149 4.730949 TCTAGACACATTAACTTCCCCG 57.269 45.455 0.00 0.00 0.00 5.73
3263 5150 4.346730 TCTAGACACATTAACTTCCCCGA 58.653 43.478 0.00 0.00 0.00 5.14
3264 5151 3.329929 AGACACATTAACTTCCCCGAC 57.670 47.619 0.00 0.00 0.00 4.79
3265 5152 2.635915 AGACACATTAACTTCCCCGACA 59.364 45.455 0.00 0.00 0.00 4.35
3266 5153 3.071892 AGACACATTAACTTCCCCGACAA 59.928 43.478 0.00 0.00 0.00 3.18
3267 5154 3.408634 ACACATTAACTTCCCCGACAAG 58.591 45.455 0.00 0.00 0.00 3.16
3268 5155 2.161609 CACATTAACTTCCCCGACAAGC 59.838 50.000 0.00 0.00 0.00 4.01
3269 5156 1.743394 CATTAACTTCCCCGACAAGCC 59.257 52.381 0.00 0.00 0.00 4.35
3270 5157 1.061546 TTAACTTCCCCGACAAGCCT 58.938 50.000 0.00 0.00 0.00 4.58
3271 5158 1.061546 TAACTTCCCCGACAAGCCTT 58.938 50.000 0.00 0.00 0.00 4.35
3272 5159 0.185175 AACTTCCCCGACAAGCCTTT 59.815 50.000 0.00 0.00 0.00 3.11
3273 5160 0.185175 ACTTCCCCGACAAGCCTTTT 59.815 50.000 0.00 0.00 0.00 2.27
3274 5161 0.881796 CTTCCCCGACAAGCCTTTTC 59.118 55.000 0.00 0.00 0.00 2.29
3275 5162 0.183971 TTCCCCGACAAGCCTTTTCA 59.816 50.000 0.00 0.00 0.00 2.69
3276 5163 0.183971 TCCCCGACAAGCCTTTTCAA 59.816 50.000 0.00 0.00 0.00 2.69
3277 5164 1.036707 CCCCGACAAGCCTTTTCAAA 58.963 50.000 0.00 0.00 0.00 2.69
3278 5165 1.269569 CCCCGACAAGCCTTTTCAAAC 60.270 52.381 0.00 0.00 0.00 2.93
3279 5166 1.407258 CCCGACAAGCCTTTTCAAACA 59.593 47.619 0.00 0.00 0.00 2.83
3280 5167 2.543653 CCCGACAAGCCTTTTCAAACAG 60.544 50.000 0.00 0.00 0.00 3.16
3281 5168 2.357637 CCGACAAGCCTTTTCAAACAGA 59.642 45.455 0.00 0.00 0.00 3.41
3282 5169 3.548818 CCGACAAGCCTTTTCAAACAGAG 60.549 47.826 0.00 0.00 0.00 3.35
3283 5170 3.548818 CGACAAGCCTTTTCAAACAGAGG 60.549 47.826 0.00 0.00 0.00 3.69
3284 5171 3.631250 ACAAGCCTTTTCAAACAGAGGA 58.369 40.909 0.00 0.00 0.00 3.71
3285 5172 4.023291 ACAAGCCTTTTCAAACAGAGGAA 58.977 39.130 0.00 0.00 0.00 3.36
3286 5173 4.098501 ACAAGCCTTTTCAAACAGAGGAAG 59.901 41.667 0.00 0.00 0.00 3.46
3287 5174 3.903467 AGCCTTTTCAAACAGAGGAAGT 58.097 40.909 0.00 0.00 0.00 3.01
3288 5175 5.048846 AGCCTTTTCAAACAGAGGAAGTA 57.951 39.130 0.00 0.00 0.00 2.24
3289 5176 5.635120 AGCCTTTTCAAACAGAGGAAGTAT 58.365 37.500 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 1700 9.715121 ACAGCATCTAAAAATTTGTTCATGAAT 57.285 25.926 12.12 0.00 0.00 2.57
290 1868 9.618890 TGGAAATATGTTTGTGGATTTGAAAAA 57.381 25.926 0.00 0.00 0.00 1.94
395 1973 9.369904 AGATTGTGGAATTTAAACATTGTATGC 57.630 29.630 0.00 0.00 0.00 3.14
462 2046 6.894828 TGCTACTTCAGAAAACCGAAAATAC 58.105 36.000 0.00 0.00 0.00 1.89
470 2054 5.453567 AATGGTTGCTACTTCAGAAAACC 57.546 39.130 6.72 6.72 40.46 3.27
471 2055 7.491048 TCAAAAATGGTTGCTACTTCAGAAAAC 59.509 33.333 0.00 0.00 28.74 2.43
570 2158 2.254546 AAAATGTCGGCAGTCACTGA 57.745 45.000 9.70 0.00 32.44 3.41
625 2213 2.021457 CATTTCCTTATTTCGGCCGGT 58.979 47.619 27.83 14.49 0.00 5.28
661 2280 8.807118 GTTCCTATTTCCTTTTCTCTTTCCATT 58.193 33.333 0.00 0.00 0.00 3.16
662 2281 8.173412 AGTTCCTATTTCCTTTTCTCTTTCCAT 58.827 33.333 0.00 0.00 0.00 3.41
663 2282 7.526918 AGTTCCTATTTCCTTTTCTCTTTCCA 58.473 34.615 0.00 0.00 0.00 3.53
664 2283 7.148390 CGAGTTCCTATTTCCTTTTCTCTTTCC 60.148 40.741 0.00 0.00 0.00 3.13
665 2284 7.603024 TCGAGTTCCTATTTCCTTTTCTCTTTC 59.397 37.037 0.00 0.00 0.00 2.62
668 2287 6.399743 GTCGAGTTCCTATTTCCTTTTCTCT 58.600 40.000 0.00 0.00 0.00 3.10
669 2288 5.288952 CGTCGAGTTCCTATTTCCTTTTCTC 59.711 44.000 0.00 0.00 0.00 2.87
670 2289 5.169295 CGTCGAGTTCCTATTTCCTTTTCT 58.831 41.667 0.00 0.00 0.00 2.52
671 2290 4.201695 GCGTCGAGTTCCTATTTCCTTTTC 60.202 45.833 0.00 0.00 0.00 2.29
676 2295 1.197910 CGCGTCGAGTTCCTATTTCC 58.802 55.000 0.00 0.00 0.00 3.13
677 2296 1.197910 CCGCGTCGAGTTCCTATTTC 58.802 55.000 4.92 0.00 0.00 2.17
735 2355 0.326927 ATTGTCCCGACCCGAATGTT 59.673 50.000 0.00 0.00 0.00 2.71
736 2356 0.326927 AATTGTCCCGACCCGAATGT 59.673 50.000 0.00 0.00 0.00 2.71
737 2357 1.014352 GAATTGTCCCGACCCGAATG 58.986 55.000 0.00 0.00 0.00 2.67
738 2358 0.616371 TGAATTGTCCCGACCCGAAT 59.384 50.000 0.00 0.00 0.00 3.34
850 2470 4.028490 TGGGTGGCGTGGTGGATC 62.028 66.667 0.00 0.00 0.00 3.36
936 2556 2.815647 GAAGACGCCGCCAAGGAG 60.816 66.667 0.00 0.00 45.00 3.69
1020 2652 2.650813 GATCGATCGGCCAGCCAAGT 62.651 60.000 16.41 0.00 35.37 3.16
1026 2658 1.375140 CCATGGATCGATCGGCCAG 60.375 63.158 26.51 19.87 34.74 4.85
1142 2774 2.753043 GTCGTACCTGGCGAGGGA 60.753 66.667 19.90 7.88 44.84 4.20
1157 2789 2.975167 GATCCGAGCAGAGCGACGTC 62.975 65.000 5.18 5.18 33.52 4.34
1214 3055 3.611025 ACCCCACCAAAGAAAGATCAA 57.389 42.857 0.00 0.00 0.00 2.57
1232 3073 0.883370 AAACGCGAACAGGAGGAACC 60.883 55.000 15.93 0.00 39.35 3.62
1260 3101 0.567968 GATCGTGACGCATCGAACAG 59.432 55.000 0.00 0.00 39.45 3.16
1271 3112 4.437239 AGATGAAATGACAGGATCGTGAC 58.563 43.478 21.63 15.69 0.00 3.67
1275 3116 3.055591 CCGAGATGAAATGACAGGATCG 58.944 50.000 0.00 0.00 0.00 3.69
1284 3125 7.011109 AGACCGTAAATAAACCGAGATGAAATG 59.989 37.037 0.00 0.00 0.00 2.32
1285 3126 7.046033 AGACCGTAAATAAACCGAGATGAAAT 58.954 34.615 0.00 0.00 0.00 2.17
1289 3130 4.440103 CGAGACCGTAAATAAACCGAGATG 59.560 45.833 0.00 0.00 0.00 2.90
1290 3131 4.336433 TCGAGACCGTAAATAAACCGAGAT 59.664 41.667 0.00 0.00 37.05 2.75
1292 3133 4.019919 TCGAGACCGTAAATAAACCGAG 57.980 45.455 0.00 0.00 37.05 4.63
1294 3135 4.353737 TGATCGAGACCGTAAATAAACCG 58.646 43.478 0.00 0.00 37.05 4.44
1296 3137 4.085721 CGCTGATCGAGACCGTAAATAAAC 60.086 45.833 0.00 0.00 41.67 2.01
1312 3153 2.352960 GGAAACAATCTGGTCGCTGATC 59.647 50.000 0.00 0.00 0.00 2.92
1319 3160 1.271163 TGGGACGGAAACAATCTGGTC 60.271 52.381 0.00 0.00 38.87 4.02
1334 3175 4.195416 GGATTTCTGAACAGATCTGGGAC 58.805 47.826 26.08 16.22 37.29 4.46
1388 3229 6.051074 ACTGAATCGTGCATTTATCATCAGA 58.949 36.000 15.76 0.00 36.25 3.27
1389 3230 6.296365 ACTGAATCGTGCATTTATCATCAG 57.704 37.500 0.00 1.01 38.14 2.90
1400 3241 0.035317 AGGCAGAACTGAATCGTGCA 59.965 50.000 5.97 0.00 35.78 4.57
1461 3312 2.029739 TCCGTACAGCGAGAACAAATCA 60.030 45.455 0.00 0.00 44.77 2.57
1480 3331 4.451150 TGCACAGCGGACGGATCC 62.451 66.667 0.00 0.00 42.28 3.36
1613 3474 3.485431 CCGCAGCTCTTGTCGCAG 61.485 66.667 0.00 0.00 0.00 5.18
1952 3825 1.352882 CGAGAACTCTGCTGCTGCTG 61.353 60.000 17.00 15.94 40.48 4.41
2121 4003 1.791204 CATCATCAGATCCTGCGAACG 59.209 52.381 0.00 0.00 30.20 3.95
2145 4027 0.110056 GTCATTTCCAGCAGCACACG 60.110 55.000 0.00 0.00 0.00 4.49
2171 4053 0.036022 AGGAGGAAGAAGCACACAGC 59.964 55.000 0.00 0.00 46.19 4.40
2172 4054 2.149578 CAAGGAGGAAGAAGCACACAG 58.850 52.381 0.00 0.00 0.00 3.66
2173 4055 1.202806 CCAAGGAGGAAGAAGCACACA 60.203 52.381 0.00 0.00 41.22 3.72
2174 4056 1.202818 ACCAAGGAGGAAGAAGCACAC 60.203 52.381 0.00 0.00 41.22 3.82
2175 4057 1.140312 ACCAAGGAGGAAGAAGCACA 58.860 50.000 0.00 0.00 41.22 4.57
2176 4058 2.155279 GAACCAAGGAGGAAGAAGCAC 58.845 52.381 0.00 0.00 41.22 4.40
2177 4059 1.774254 TGAACCAAGGAGGAAGAAGCA 59.226 47.619 0.00 0.00 41.22 3.91
2178 4060 2.568623 TGAACCAAGGAGGAAGAAGC 57.431 50.000 0.00 0.00 41.22 3.86
2179 4061 3.265791 CGATGAACCAAGGAGGAAGAAG 58.734 50.000 0.00 0.00 41.22 2.85
2186 4068 2.363788 TCGAACGATGAACCAAGGAG 57.636 50.000 0.00 0.00 0.00 3.69
2203 4085 4.022762 TGTTTATCAACAACCCAACCATCG 60.023 41.667 0.00 0.00 40.10 3.84
2214 4096 8.582437 AGTAGCACTAGTACTGTTTATCAACAA 58.418 33.333 5.39 0.00 42.53 2.83
2250 4132 1.471829 GCCCCCAAACCAGTTCCAAG 61.472 60.000 0.00 0.00 0.00 3.61
2322 4204 1.398739 CTGTAACCAAACACGCACACA 59.601 47.619 0.00 0.00 0.00 3.72
2334 4216 7.719633 GCCCTAAATTATCAGATTCTGTAACCA 59.280 37.037 13.23 0.00 32.61 3.67
2362 4244 5.385617 CCTCATTCGTCAAGAACAAATCAC 58.614 41.667 0.00 0.00 42.39 3.06
2369 4251 5.324697 GTTATTGCCTCATTCGTCAAGAAC 58.675 41.667 0.00 0.00 42.39 3.01
2389 4271 1.957177 TCAACCAATTTGCCTGCGTTA 59.043 42.857 0.00 0.00 34.88 3.18
2415 4297 4.442893 CCACCTCACAAACTGAAGTACTGA 60.443 45.833 0.00 0.00 0.00 3.41
2416 4298 3.809832 CCACCTCACAAACTGAAGTACTG 59.190 47.826 0.00 0.00 0.00 2.74
2417 4299 3.181454 CCCACCTCACAAACTGAAGTACT 60.181 47.826 0.00 0.00 0.00 2.73
2418 4300 3.139077 CCCACCTCACAAACTGAAGTAC 58.861 50.000 0.00 0.00 0.00 2.73
2419 4301 2.486548 GCCCACCTCACAAACTGAAGTA 60.487 50.000 0.00 0.00 0.00 2.24
2420 4302 1.750682 GCCCACCTCACAAACTGAAGT 60.751 52.381 0.00 0.00 0.00 3.01
2421 4303 0.954452 GCCCACCTCACAAACTGAAG 59.046 55.000 0.00 0.00 0.00 3.02
2422 4304 0.257328 TGCCCACCTCACAAACTGAA 59.743 50.000 0.00 0.00 0.00 3.02
2439 4321 1.244019 ATCCTGGCGTTCCAAGTTGC 61.244 55.000 0.00 0.00 42.91 4.17
2441 4323 0.400213 TGATCCTGGCGTTCCAAGTT 59.600 50.000 0.00 0.00 42.91 2.66
2442 4324 0.400213 TTGATCCTGGCGTTCCAAGT 59.600 50.000 0.00 0.00 42.91 3.16
2455 4337 4.058817 GGACGAGACATGGTTATTGATCC 58.941 47.826 0.00 0.00 0.00 3.36
2460 4342 3.821421 GGAGGACGAGACATGGTTATT 57.179 47.619 0.00 0.00 0.00 1.40
2481 4363 2.046283 TGAACACGTGATCGACTGAC 57.954 50.000 25.01 0.00 40.62 3.51
2483 4365 4.263209 GTCTATTGAACACGTGATCGACTG 59.737 45.833 25.01 15.19 40.62 3.51
2488 4370 6.952935 AGAAAGTCTATTGAACACGTGATC 57.047 37.500 25.01 21.15 0.00 2.92
2500 4382 9.110502 GGTATTTTCGGATGAAGAAAGTCTATT 57.889 33.333 0.00 0.00 38.61 1.73
2508 4391 4.868171 CGACAGGTATTTTCGGATGAAGAA 59.132 41.667 0.00 0.00 35.06 2.52
2509 4392 4.158949 TCGACAGGTATTTTCGGATGAAGA 59.841 41.667 0.00 0.00 35.06 2.87
2512 4395 4.459390 TTCGACAGGTATTTTCGGATGA 57.541 40.909 0.00 0.00 33.50 2.92
2567 4450 9.179552 CTTGTCGAAGAAATGATCTAGATGTAG 57.820 37.037 10.74 0.00 39.69 2.74
2568 4451 8.687242 ACTTGTCGAAGAAATGATCTAGATGTA 58.313 33.333 10.74 0.00 39.69 2.29
2570 4453 9.689976 ATACTTGTCGAAGAAATGATCTAGATG 57.310 33.333 10.74 0.00 39.69 2.90
2576 4459 8.380644 TCGAAAATACTTGTCGAAGAAATGATC 58.619 33.333 0.00 0.00 40.59 2.92
2588 4471 7.039882 TGATACTCCCTTCGAAAATACTTGTC 58.960 38.462 0.00 0.00 0.00 3.18
2604 4487 3.334583 TGTGTGCTCTTTGATACTCCC 57.665 47.619 0.00 0.00 0.00 4.30
2609 4492 5.961272 TCGATACTTGTGTGCTCTTTGATA 58.039 37.500 0.00 0.00 0.00 2.15
2614 4501 3.589988 CCTTCGATACTTGTGTGCTCTT 58.410 45.455 0.00 0.00 0.00 2.85
2623 4510 1.429148 GCCACCGCCTTCGATACTTG 61.429 60.000 0.00 0.00 38.10 3.16
2627 4514 2.055633 TGAGCCACCGCCTTCGATA 61.056 57.895 0.00 0.00 38.10 2.92
2639 4526 0.605319 GAACCAATGACCGTGAGCCA 60.605 55.000 0.00 0.00 0.00 4.75
2645 4532 2.365582 GCCTTATGAACCAATGACCGT 58.634 47.619 0.00 0.00 0.00 4.83
2646 4533 1.676006 GGCCTTATGAACCAATGACCG 59.324 52.381 0.00 0.00 0.00 4.79
2650 4537 1.066002 CGCAGGCCTTATGAACCAATG 59.934 52.381 0.00 0.00 0.00 2.82
2651 4538 1.064758 TCGCAGGCCTTATGAACCAAT 60.065 47.619 0.00 0.00 0.00 3.16
2653 4540 0.546122 ATCGCAGGCCTTATGAACCA 59.454 50.000 0.00 0.00 0.00 3.67
2657 4544 0.819259 GGCAATCGCAGGCCTTATGA 60.819 55.000 0.00 0.59 46.74 2.15
2695 4582 2.283966 ACACGGGACCTGGAGGAG 60.284 66.667 5.03 0.00 38.94 3.69
2696 4583 2.283676 GACACGGGACCTGGAGGA 60.284 66.667 5.03 0.00 38.94 3.71
2697 4584 3.760035 CGACACGGGACCTGGAGG 61.760 72.222 5.03 0.00 42.17 4.30
2698 4585 3.760035 CCGACACGGGACCTGGAG 61.760 72.222 5.03 0.00 44.15 3.86
2708 4595 1.623081 CGTTCCATTGTCCCGACACG 61.623 60.000 0.00 0.00 41.67 4.49
2709 4596 1.296056 CCGTTCCATTGTCCCGACAC 61.296 60.000 0.00 0.00 41.67 3.67
2710 4597 1.004320 CCGTTCCATTGTCCCGACA 60.004 57.895 0.00 0.00 39.98 4.35
2711 4598 1.743995 CCCGTTCCATTGTCCCGAC 60.744 63.158 0.00 0.00 0.00 4.79
2712 4599 2.666207 CCCGTTCCATTGTCCCGA 59.334 61.111 0.00 0.00 0.00 5.14
2713 4600 3.131478 GCCCGTTCCATTGTCCCG 61.131 66.667 0.00 0.00 0.00 5.14
2714 4601 2.754254 GGCCCGTTCCATTGTCCC 60.754 66.667 0.00 0.00 0.00 4.46
2715 4602 3.131478 CGGCCCGTTCCATTGTCC 61.131 66.667 0.00 0.00 0.00 4.02
2716 4603 1.238625 TTTCGGCCCGTTCCATTGTC 61.239 55.000 1.63 0.00 0.00 3.18
2717 4604 1.228306 TTTCGGCCCGTTCCATTGT 60.228 52.632 1.63 0.00 0.00 2.71
2718 4605 1.211709 GTTTCGGCCCGTTCCATTG 59.788 57.895 1.63 0.00 0.00 2.82
2719 4606 1.974875 GGTTTCGGCCCGTTCCATT 60.975 57.895 1.63 0.00 0.00 3.16
2720 4607 2.360726 GGTTTCGGCCCGTTCCAT 60.361 61.111 1.63 0.00 0.00 3.41
2721 4608 4.992511 CGGTTTCGGCCCGTTCCA 62.993 66.667 1.63 0.00 40.59 3.53
2731 4618 4.735132 TGCTCTCCCGCGGTTTCG 62.735 66.667 26.12 8.83 39.81 3.46
2732 4619 2.815647 CTGCTCTCCCGCGGTTTC 60.816 66.667 26.12 8.73 0.00 2.78
2739 4626 2.923426 TATTTGCCGCTGCTCTCCCG 62.923 60.000 0.70 0.00 38.71 5.14
2740 4627 0.748005 TTATTTGCCGCTGCTCTCCC 60.748 55.000 0.70 0.00 38.71 4.30
2741 4628 1.094785 TTTATTTGCCGCTGCTCTCC 58.905 50.000 0.70 0.00 38.71 3.71
2742 4629 3.427161 AATTTATTTGCCGCTGCTCTC 57.573 42.857 0.70 0.00 38.71 3.20
2743 4630 3.193267 TCAAATTTATTTGCCGCTGCTCT 59.807 39.130 9.75 0.00 45.06 4.09
2744 4631 3.510719 TCAAATTTATTTGCCGCTGCTC 58.489 40.909 9.75 0.00 45.06 4.26
2745 4632 3.591196 TCAAATTTATTTGCCGCTGCT 57.409 38.095 9.75 0.00 45.06 4.24
2746 4633 3.864583 TCATCAAATTTATTTGCCGCTGC 59.135 39.130 9.75 0.00 45.06 5.25
2747 4634 4.268405 GGTCATCAAATTTATTTGCCGCTG 59.732 41.667 9.75 5.79 45.06 5.18
2748 4635 4.432712 GGTCATCAAATTTATTTGCCGCT 58.567 39.130 9.75 0.00 45.06 5.52
2749 4636 3.242712 CGGTCATCAAATTTATTTGCCGC 59.757 43.478 14.51 0.00 45.06 6.53
2750 4637 4.420168 ACGGTCATCAAATTTATTTGCCG 58.580 39.130 20.48 20.48 46.01 5.69
2751 4638 5.406649 TGACGGTCATCAAATTTATTTGCC 58.593 37.500 6.76 5.32 45.06 4.52
2752 4639 7.393327 CAATGACGGTCATCAAATTTATTTGC 58.607 34.615 22.85 0.00 45.06 3.68
2753 4640 7.758980 TCCAATGACGGTCATCAAATTTATTTG 59.241 33.333 22.85 13.74 46.39 2.32
2754 4641 7.759433 GTCCAATGACGGTCATCAAATTTATTT 59.241 33.333 22.85 2.51 35.76 1.40
2755 4642 7.093988 TGTCCAATGACGGTCATCAAATTTATT 60.094 33.333 22.85 3.23 44.86 1.40
2756 4643 6.376864 TGTCCAATGACGGTCATCAAATTTAT 59.623 34.615 22.85 3.13 44.86 1.40
2757 4644 5.707764 TGTCCAATGACGGTCATCAAATTTA 59.292 36.000 22.85 5.46 44.86 1.40
2758 4645 4.522405 TGTCCAATGACGGTCATCAAATTT 59.478 37.500 22.85 5.39 44.86 1.82
2759 4646 4.078537 TGTCCAATGACGGTCATCAAATT 58.921 39.130 22.85 6.12 44.86 1.82
2760 4647 3.684908 TGTCCAATGACGGTCATCAAAT 58.315 40.909 22.85 5.69 44.86 2.32
2761 4648 3.133141 TGTCCAATGACGGTCATCAAA 57.867 42.857 22.85 9.20 44.86 2.69
2762 4649 2.811431 GTTGTCCAATGACGGTCATCAA 59.189 45.455 22.85 18.42 44.86 2.57
2763 4650 2.422597 GTTGTCCAATGACGGTCATCA 58.577 47.619 22.85 13.92 44.86 3.07
2764 4651 1.737793 GGTTGTCCAATGACGGTCATC 59.262 52.381 22.85 11.59 44.86 2.92
2765 4652 1.073125 TGGTTGTCCAATGACGGTCAT 59.927 47.619 17.62 17.62 44.86 3.06
2766 4653 0.470341 TGGTTGTCCAATGACGGTCA 59.530 50.000 14.01 14.01 44.86 4.02
2767 4654 3.315765 TGGTTGTCCAATGACGGTC 57.684 52.632 0.00 0.00 44.86 4.79
2776 4663 5.365025 TGATCTGGAAATTTTTGGTTGTCCA 59.635 36.000 0.00 0.00 42.66 4.02
2777 4664 5.852827 TGATCTGGAAATTTTTGGTTGTCC 58.147 37.500 0.00 0.00 0.00 4.02
2778 4665 7.656948 TCAATGATCTGGAAATTTTTGGTTGTC 59.343 33.333 0.00 0.00 0.00 3.18
2779 4666 7.507829 TCAATGATCTGGAAATTTTTGGTTGT 58.492 30.769 0.00 0.00 0.00 3.32
2780 4667 7.658575 ACTCAATGATCTGGAAATTTTTGGTTG 59.341 33.333 0.00 0.00 0.00 3.77
2781 4668 7.738847 ACTCAATGATCTGGAAATTTTTGGTT 58.261 30.769 0.00 0.00 0.00 3.67
2782 4669 7.307131 ACTCAATGATCTGGAAATTTTTGGT 57.693 32.000 0.00 0.00 0.00 3.67
2783 4670 8.500773 CAAACTCAATGATCTGGAAATTTTTGG 58.499 33.333 0.00 0.00 0.00 3.28
2784 4671 8.013378 GCAAACTCAATGATCTGGAAATTTTTG 58.987 33.333 0.00 0.00 0.00 2.44
2785 4672 7.173735 GGCAAACTCAATGATCTGGAAATTTTT 59.826 33.333 0.00 0.00 0.00 1.94
2786 4673 6.652062 GGCAAACTCAATGATCTGGAAATTTT 59.348 34.615 0.00 0.00 0.00 1.82
2787 4674 6.013984 AGGCAAACTCAATGATCTGGAAATTT 60.014 34.615 0.00 0.00 0.00 1.82
2788 4675 5.482878 AGGCAAACTCAATGATCTGGAAATT 59.517 36.000 0.00 0.00 0.00 1.82
2789 4676 5.021458 AGGCAAACTCAATGATCTGGAAAT 58.979 37.500 0.00 0.00 0.00 2.17
2790 4677 4.410099 AGGCAAACTCAATGATCTGGAAA 58.590 39.130 0.00 0.00 0.00 3.13
2791 4678 4.038271 AGGCAAACTCAATGATCTGGAA 57.962 40.909 0.00 0.00 0.00 3.53
2792 4679 3.726557 AGGCAAACTCAATGATCTGGA 57.273 42.857 0.00 0.00 0.00 3.86
2793 4680 5.902613 TTAAGGCAAACTCAATGATCTGG 57.097 39.130 0.00 0.00 0.00 3.86
2794 4681 6.917533 ACTTTAAGGCAAACTCAATGATCTG 58.082 36.000 0.00 0.00 0.00 2.90
2795 4682 7.014615 ACAACTTTAAGGCAAACTCAATGATCT 59.985 33.333 0.00 0.00 0.00 2.75
2796 4683 7.147976 ACAACTTTAAGGCAAACTCAATGATC 58.852 34.615 0.00 0.00 0.00 2.92
2797 4684 7.054491 ACAACTTTAAGGCAAACTCAATGAT 57.946 32.000 0.00 0.00 0.00 2.45
2798 4685 6.460953 GGACAACTTTAAGGCAAACTCAATGA 60.461 38.462 0.00 0.00 0.00 2.57
2799 4686 5.691754 GGACAACTTTAAGGCAAACTCAATG 59.308 40.000 0.00 0.00 0.00 2.82
2800 4687 5.598417 AGGACAACTTTAAGGCAAACTCAAT 59.402 36.000 0.00 0.00 0.00 2.57
2801 4688 4.953579 AGGACAACTTTAAGGCAAACTCAA 59.046 37.500 0.00 0.00 0.00 3.02
2802 4689 4.532834 AGGACAACTTTAAGGCAAACTCA 58.467 39.130 0.00 0.00 0.00 3.41
2803 4690 5.515797 AAGGACAACTTTAAGGCAAACTC 57.484 39.130 0.00 0.00 35.35 3.01
2823 4710 2.162408 GGAGTGATCGGCCTTTGAAAAG 59.838 50.000 0.00 0.00 35.79 2.27
2824 4711 2.159382 GGAGTGATCGGCCTTTGAAAA 58.841 47.619 0.00 0.00 0.00 2.29
2825 4712 1.821216 GGAGTGATCGGCCTTTGAAA 58.179 50.000 0.00 0.00 0.00 2.69
2826 4713 0.391130 CGGAGTGATCGGCCTTTGAA 60.391 55.000 0.00 0.00 0.00 2.69
2827 4714 1.218047 CGGAGTGATCGGCCTTTGA 59.782 57.895 0.00 0.00 0.00 2.69
2828 4715 0.391130 TTCGGAGTGATCGGCCTTTG 60.391 55.000 0.00 0.00 0.00 2.77
2829 4716 0.541863 ATTCGGAGTGATCGGCCTTT 59.458 50.000 0.00 0.00 0.00 3.11
2830 4717 0.179073 CATTCGGAGTGATCGGCCTT 60.179 55.000 0.00 0.00 0.00 4.35
2831 4718 1.043116 TCATTCGGAGTGATCGGCCT 61.043 55.000 0.00 0.00 0.00 5.19
2832 4719 0.034059 ATCATTCGGAGTGATCGGCC 59.966 55.000 9.90 0.00 30.78 6.13
2833 4720 1.871080 AATCATTCGGAGTGATCGGC 58.129 50.000 15.23 0.00 35.35 5.54
2834 4721 6.621613 TCTATTAATCATTCGGAGTGATCGG 58.378 40.000 15.23 5.89 35.35 4.18
2835 4722 6.252441 GCTCTATTAATCATTCGGAGTGATCG 59.748 42.308 15.23 4.23 35.35 3.69
2836 4723 7.062839 GTGCTCTATTAATCATTCGGAGTGATC 59.937 40.741 15.23 2.88 35.35 2.92
2837 4724 6.870965 GTGCTCTATTAATCATTCGGAGTGAT 59.129 38.462 9.90 9.90 37.91 3.06
2838 4725 6.216569 GTGCTCTATTAATCATTCGGAGTGA 58.783 40.000 5.63 5.63 0.00 3.41
2839 4726 5.117745 CGTGCTCTATTAATCATTCGGAGTG 59.882 44.000 0.00 0.00 0.00 3.51
2840 4727 5.009710 TCGTGCTCTATTAATCATTCGGAGT 59.990 40.000 0.00 0.00 0.00 3.85
2841 4728 5.461526 TCGTGCTCTATTAATCATTCGGAG 58.538 41.667 0.00 0.00 0.00 4.63
2842 4729 5.447624 TCGTGCTCTATTAATCATTCGGA 57.552 39.130 0.00 0.00 0.00 4.55
2843 4730 4.090642 GCTCGTGCTCTATTAATCATTCGG 59.909 45.833 1.41 0.00 36.03 4.30
2844 4731 5.183817 GCTCGTGCTCTATTAATCATTCG 57.816 43.478 1.41 0.00 36.03 3.34
2866 4753 0.250727 TTGAAACGGGCTCCCTTGAG 60.251 55.000 3.11 0.00 41.84 3.02
2867 4754 0.183971 TTTGAAACGGGCTCCCTTGA 59.816 50.000 3.11 0.00 0.00 3.02
2868 4755 1.036707 TTTTGAAACGGGCTCCCTTG 58.963 50.000 3.11 0.00 0.00 3.61
2869 4756 1.783071 TTTTTGAAACGGGCTCCCTT 58.217 45.000 3.11 0.00 0.00 3.95
2870 4757 2.009681 ATTTTTGAAACGGGCTCCCT 57.990 45.000 3.11 0.00 0.00 4.20
2871 4758 3.445805 TGATATTTTTGAAACGGGCTCCC 59.554 43.478 0.00 0.00 0.00 4.30
2872 4759 4.712122 TGATATTTTTGAAACGGGCTCC 57.288 40.909 0.00 0.00 0.00 4.70
2873 4760 8.871686 AAATATGATATTTTTGAAACGGGCTC 57.128 30.769 4.65 0.00 0.00 4.70
2874 4761 9.313118 GAAAATATGATATTTTTGAAACGGGCT 57.687 29.630 20.47 0.00 32.03 5.19
2875 4762 9.092876 TGAAAATATGATATTTTTGAAACGGGC 57.907 29.630 20.47 8.30 32.03 6.13
2956 4843 9.537192 CATCCATTTTTATGCATGTATTTCTGT 57.463 29.630 10.16 0.00 0.00 3.41
2957 4844 8.492748 GCATCCATTTTTATGCATGTATTTCTG 58.507 33.333 10.16 0.00 46.19 3.02
2958 4845 8.597662 GCATCCATTTTTATGCATGTATTTCT 57.402 30.769 10.16 0.00 46.19 2.52
2968 4855 8.298854 TCTGTATGTATGCATCCATTTTTATGC 58.701 33.333 10.28 0.00 46.92 3.14
2974 4861 9.353431 TGTATTTCTGTATGTATGCATCCATTT 57.647 29.630 10.28 0.00 36.58 2.32
2975 4862 8.922931 TGTATTTCTGTATGTATGCATCCATT 57.077 30.769 10.28 0.00 36.58 3.16
2977 4864 9.435688 GTATGTATTTCTGTATGTATGCATCCA 57.564 33.333 0.19 0.00 36.58 3.41
2978 4865 9.435688 TGTATGTATTTCTGTATGTATGCATCC 57.564 33.333 0.19 0.00 36.58 3.51
3002 4889 9.777297 TGCATGTATTTCTGTATGTATGTATGT 57.223 29.630 0.00 0.00 0.00 2.29
3005 4892 9.995003 TCATGCATGTATTTCTGTATGTATGTA 57.005 29.630 25.43 0.00 41.39 2.29
3006 4893 8.907222 TCATGCATGTATTTCTGTATGTATGT 57.093 30.769 25.43 0.00 41.39 2.29
3043 4930 9.220767 GTCAGGAAACTTATTCTGTATTTCTGT 57.779 33.333 0.00 0.00 40.21 3.41
3044 4931 9.219603 TGTCAGGAAACTTATTCTGTATTTCTG 57.780 33.333 0.00 0.00 40.21 3.02
3045 4932 9.965902 ATGTCAGGAAACTTATTCTGTATTTCT 57.034 29.630 0.00 0.00 40.21 2.52
3048 4935 9.331282 GCTATGTCAGGAAACTTATTCTGTATT 57.669 33.333 0.00 0.00 40.21 1.89
3049 4936 7.653713 CGCTATGTCAGGAAACTTATTCTGTAT 59.346 37.037 0.00 0.00 40.21 2.29
3050 4937 6.978659 CGCTATGTCAGGAAACTTATTCTGTA 59.021 38.462 0.00 0.00 40.21 2.74
3051 4938 5.812642 CGCTATGTCAGGAAACTTATTCTGT 59.187 40.000 0.00 0.00 40.21 3.41
3052 4939 5.277058 GCGCTATGTCAGGAAACTTATTCTG 60.277 44.000 0.00 0.00 40.21 3.02
3053 4940 4.811557 GCGCTATGTCAGGAAACTTATTCT 59.188 41.667 0.00 0.00 40.21 2.40
3054 4941 4.570772 TGCGCTATGTCAGGAAACTTATTC 59.429 41.667 9.73 0.00 40.21 1.75
3055 4942 4.513442 TGCGCTATGTCAGGAAACTTATT 58.487 39.130 9.73 0.00 40.21 1.40
3056 4943 4.137116 TGCGCTATGTCAGGAAACTTAT 57.863 40.909 9.73 0.00 40.21 1.73
3057 4944 3.603158 TGCGCTATGTCAGGAAACTTA 57.397 42.857 9.73 0.00 40.21 2.24
3058 4945 2.472695 TGCGCTATGTCAGGAAACTT 57.527 45.000 9.73 0.00 40.21 2.66
3059 4946 2.472695 TTGCGCTATGTCAGGAAACT 57.527 45.000 9.73 0.00 46.44 2.66
3060 4947 3.552604 TTTTGCGCTATGTCAGGAAAC 57.447 42.857 9.73 0.00 0.00 2.78
3061 4948 4.782019 AATTTTGCGCTATGTCAGGAAA 57.218 36.364 9.73 0.00 0.00 3.13
3062 4949 4.201910 GCTAATTTTGCGCTATGTCAGGAA 60.202 41.667 9.73 0.00 0.00 3.36
3063 4950 3.312421 GCTAATTTTGCGCTATGTCAGGA 59.688 43.478 9.73 0.00 0.00 3.86
3064 4951 3.548818 GGCTAATTTTGCGCTATGTCAGG 60.549 47.826 9.73 0.00 0.00 3.86
3065 4952 3.065233 TGGCTAATTTTGCGCTATGTCAG 59.935 43.478 9.73 0.29 0.00 3.51
3066 4953 3.013219 TGGCTAATTTTGCGCTATGTCA 58.987 40.909 9.73 0.00 0.00 3.58
3067 4954 3.691049 TGGCTAATTTTGCGCTATGTC 57.309 42.857 9.73 0.00 0.00 3.06
3068 4955 3.443681 AGTTGGCTAATTTTGCGCTATGT 59.556 39.130 9.73 0.00 0.00 2.29
3069 4956 4.032703 AGTTGGCTAATTTTGCGCTATG 57.967 40.909 9.73 0.00 0.00 2.23
3070 4957 4.638421 TGTAGTTGGCTAATTTTGCGCTAT 59.362 37.500 9.73 0.00 0.00 2.97
3071 4958 4.004314 TGTAGTTGGCTAATTTTGCGCTA 58.996 39.130 9.73 0.00 0.00 4.26
3072 4959 2.817258 TGTAGTTGGCTAATTTTGCGCT 59.183 40.909 9.73 0.00 0.00 5.92
3073 4960 3.210358 TGTAGTTGGCTAATTTTGCGC 57.790 42.857 0.00 0.00 0.00 6.09
3074 4961 5.874831 TGTATGTAGTTGGCTAATTTTGCG 58.125 37.500 0.00 0.00 0.00 4.85
3075 4962 7.479980 TCATGTATGTAGTTGGCTAATTTTGC 58.520 34.615 0.00 0.00 0.00 3.68
3076 4963 9.853555 TTTCATGTATGTAGTTGGCTAATTTTG 57.146 29.630 0.00 0.00 0.00 2.44
3080 4967 8.632679 CCATTTTCATGTATGTAGTTGGCTAAT 58.367 33.333 0.00 0.00 0.00 1.73
3081 4968 7.068103 CCCATTTTCATGTATGTAGTTGGCTAA 59.932 37.037 0.00 0.00 0.00 3.09
3082 4969 6.545666 CCCATTTTCATGTATGTAGTTGGCTA 59.454 38.462 0.00 0.00 0.00 3.93
3083 4970 5.360714 CCCATTTTCATGTATGTAGTTGGCT 59.639 40.000 0.00 0.00 0.00 4.75
3084 4971 5.591099 CCCATTTTCATGTATGTAGTTGGC 58.409 41.667 0.00 0.00 0.00 4.52
3085 4972 5.451798 GGCCCATTTTCATGTATGTAGTTGG 60.452 44.000 0.00 0.00 0.00 3.77
3086 4973 5.126869 TGGCCCATTTTCATGTATGTAGTTG 59.873 40.000 0.00 0.00 0.00 3.16
3087 4974 5.268387 TGGCCCATTTTCATGTATGTAGTT 58.732 37.500 0.00 0.00 0.00 2.24
3088 4975 4.865905 TGGCCCATTTTCATGTATGTAGT 58.134 39.130 0.00 0.00 0.00 2.73
3089 4976 5.850557 TTGGCCCATTTTCATGTATGTAG 57.149 39.130 0.00 0.00 0.00 2.74
3090 4977 6.805016 AATTGGCCCATTTTCATGTATGTA 57.195 33.333 0.00 0.00 0.00 2.29
3091 4978 5.697082 AATTGGCCCATTTTCATGTATGT 57.303 34.783 0.00 0.00 0.00 2.29
3092 4979 7.393841 AAAAATTGGCCCATTTTCATGTATG 57.606 32.000 23.63 0.00 0.00 2.39
3115 5002 5.407407 TCCCAGCAACTAACAAACAAAAA 57.593 34.783 0.00 0.00 0.00 1.94
3116 5003 5.606348 ATCCCAGCAACTAACAAACAAAA 57.394 34.783 0.00 0.00 0.00 2.44
3117 5004 5.606348 AATCCCAGCAACTAACAAACAAA 57.394 34.783 0.00 0.00 0.00 2.83
3118 5005 5.606348 AAATCCCAGCAACTAACAAACAA 57.394 34.783 0.00 0.00 0.00 2.83
3119 5006 5.362430 AGAAAATCCCAGCAACTAACAAACA 59.638 36.000 0.00 0.00 0.00 2.83
3120 5007 5.842907 AGAAAATCCCAGCAACTAACAAAC 58.157 37.500 0.00 0.00 0.00 2.93
3121 5008 6.478512 AAGAAAATCCCAGCAACTAACAAA 57.521 33.333 0.00 0.00 0.00 2.83
3122 5009 6.478512 AAAGAAAATCCCAGCAACTAACAA 57.521 33.333 0.00 0.00 0.00 2.83
3123 5010 6.127196 ACAAAAGAAAATCCCAGCAACTAACA 60.127 34.615 0.00 0.00 0.00 2.41
3124 5011 6.280643 ACAAAAGAAAATCCCAGCAACTAAC 58.719 36.000 0.00 0.00 0.00 2.34
3125 5012 6.478512 ACAAAAGAAAATCCCAGCAACTAA 57.521 33.333 0.00 0.00 0.00 2.24
3126 5013 6.478512 AACAAAAGAAAATCCCAGCAACTA 57.521 33.333 0.00 0.00 0.00 2.24
3127 5014 5.357742 AACAAAAGAAAATCCCAGCAACT 57.642 34.783 0.00 0.00 0.00 3.16
3128 5015 6.435430 AAAACAAAAGAAAATCCCAGCAAC 57.565 33.333 0.00 0.00 0.00 4.17
3129 5016 6.624642 GCAAAAACAAAAGAAAATCCCAGCAA 60.625 34.615 0.00 0.00 0.00 3.91
3130 5017 5.163673 GCAAAAACAAAAGAAAATCCCAGCA 60.164 36.000 0.00 0.00 0.00 4.41
3131 5018 5.163673 TGCAAAAACAAAAGAAAATCCCAGC 60.164 36.000 0.00 0.00 0.00 4.85
3132 5019 6.128063 TGTGCAAAAACAAAAGAAAATCCCAG 60.128 34.615 0.00 0.00 0.00 4.45
3133 5020 5.707298 TGTGCAAAAACAAAAGAAAATCCCA 59.293 32.000 0.00 0.00 0.00 4.37
3134 5021 6.027131 GTGTGCAAAAACAAAAGAAAATCCC 58.973 36.000 0.00 0.00 0.00 3.85
3135 5022 6.027131 GGTGTGCAAAAACAAAAGAAAATCC 58.973 36.000 0.00 0.00 0.00 3.01
3136 5023 6.841119 AGGTGTGCAAAAACAAAAGAAAATC 58.159 32.000 0.00 0.00 0.00 2.17
3137 5024 6.816134 AGGTGTGCAAAAACAAAAGAAAAT 57.184 29.167 0.00 0.00 0.00 1.82
3138 5025 6.433766 CAAGGTGTGCAAAAACAAAAGAAAA 58.566 32.000 0.00 0.00 0.00 2.29
3139 5026 5.995055 CAAGGTGTGCAAAAACAAAAGAAA 58.005 33.333 0.00 0.00 0.00 2.52
3140 5027 5.604010 CAAGGTGTGCAAAAACAAAAGAA 57.396 34.783 0.00 0.00 0.00 2.52
3154 5041 6.968904 GTGAGTATTATGATTTGCAAGGTGTG 59.031 38.462 0.00 0.00 0.00 3.82
3155 5042 6.886459 AGTGAGTATTATGATTTGCAAGGTGT 59.114 34.615 0.00 0.00 0.00 4.16
3156 5043 7.325660 AGTGAGTATTATGATTTGCAAGGTG 57.674 36.000 0.00 0.00 0.00 4.00
3157 5044 7.201644 CGAAGTGAGTATTATGATTTGCAAGGT 60.202 37.037 0.00 0.00 0.00 3.50
3158 5045 7.128331 CGAAGTGAGTATTATGATTTGCAAGG 58.872 38.462 0.00 0.00 0.00 3.61
3159 5046 7.688372 ACGAAGTGAGTATTATGATTTGCAAG 58.312 34.615 0.00 0.00 42.51 4.01
3160 5047 7.609760 ACGAAGTGAGTATTATGATTTGCAA 57.390 32.000 0.00 0.00 42.51 4.08
3179 5066 3.550678 GCAGTAAGTAATTCCGGACGAAG 59.449 47.826 1.83 0.00 32.78 3.79
3180 5067 3.514645 GCAGTAAGTAATTCCGGACGAA 58.485 45.455 1.83 0.00 34.14 3.85
3181 5068 2.478370 CGCAGTAAGTAATTCCGGACGA 60.478 50.000 1.83 0.00 0.00 4.20
3182 5069 1.850441 CGCAGTAAGTAATTCCGGACG 59.150 52.381 1.83 0.00 0.00 4.79
3183 5070 2.159198 TCCGCAGTAAGTAATTCCGGAC 60.159 50.000 1.83 0.00 38.34 4.79
3184 5071 2.101783 TCCGCAGTAAGTAATTCCGGA 58.898 47.619 0.00 0.00 40.62 5.14
3185 5072 2.589798 TCCGCAGTAAGTAATTCCGG 57.410 50.000 0.00 0.00 35.83 5.14
3186 5073 4.331717 ACATTTCCGCAGTAAGTAATTCCG 59.668 41.667 0.00 0.00 0.00 4.30
3187 5074 5.813080 ACATTTCCGCAGTAAGTAATTCC 57.187 39.130 0.00 0.00 0.00 3.01
3193 5080 8.188139 CCATTTTTATACATTTCCGCAGTAAGT 58.812 33.333 0.00 0.00 0.00 2.24
3194 5081 8.402472 TCCATTTTTATACATTTCCGCAGTAAG 58.598 33.333 0.00 0.00 0.00 2.34
3195 5082 8.282455 TCCATTTTTATACATTTCCGCAGTAA 57.718 30.769 0.00 0.00 0.00 2.24
3196 5083 7.867305 TCCATTTTTATACATTTCCGCAGTA 57.133 32.000 0.00 0.00 0.00 2.74
3197 5084 6.767524 TCCATTTTTATACATTTCCGCAGT 57.232 33.333 0.00 0.00 0.00 4.40
3198 5085 7.202526 ACATCCATTTTTATACATTTCCGCAG 58.797 34.615 0.00 0.00 0.00 5.18
3199 5086 7.106439 ACATCCATTTTTATACATTTCCGCA 57.894 32.000 0.00 0.00 0.00 5.69
3200 5087 9.691362 AATACATCCATTTTTATACATTTCCGC 57.309 29.630 0.00 0.00 0.00 5.54
3233 5120 9.654663 GGAAGTTAATGTGTCTAGATGTACTTT 57.345 33.333 0.00 3.87 0.00 2.66
3234 5121 8.258708 GGGAAGTTAATGTGTCTAGATGTACTT 58.741 37.037 0.00 0.00 0.00 2.24
3235 5122 7.147707 GGGGAAGTTAATGTGTCTAGATGTACT 60.148 40.741 0.00 0.00 0.00 2.73
3236 5123 6.985059 GGGGAAGTTAATGTGTCTAGATGTAC 59.015 42.308 0.00 0.00 0.00 2.90
3237 5124 6.183360 CGGGGAAGTTAATGTGTCTAGATGTA 60.183 42.308 0.00 0.00 0.00 2.29
3238 5125 5.395324 CGGGGAAGTTAATGTGTCTAGATGT 60.395 44.000 0.00 0.00 0.00 3.06
3239 5126 5.050490 CGGGGAAGTTAATGTGTCTAGATG 58.950 45.833 0.00 0.00 0.00 2.90
3240 5127 4.960469 TCGGGGAAGTTAATGTGTCTAGAT 59.040 41.667 0.00 0.00 0.00 1.98
3241 5128 4.159135 GTCGGGGAAGTTAATGTGTCTAGA 59.841 45.833 0.00 0.00 0.00 2.43
3242 5129 4.081862 TGTCGGGGAAGTTAATGTGTCTAG 60.082 45.833 0.00 0.00 0.00 2.43
3243 5130 3.833650 TGTCGGGGAAGTTAATGTGTCTA 59.166 43.478 0.00 0.00 0.00 2.59
3244 5131 2.635915 TGTCGGGGAAGTTAATGTGTCT 59.364 45.455 0.00 0.00 0.00 3.41
3245 5132 3.048337 TGTCGGGGAAGTTAATGTGTC 57.952 47.619 0.00 0.00 0.00 3.67
3246 5133 3.408634 CTTGTCGGGGAAGTTAATGTGT 58.591 45.455 0.00 0.00 0.00 3.72
3247 5134 2.161609 GCTTGTCGGGGAAGTTAATGTG 59.838 50.000 0.00 0.00 0.00 3.21
3248 5135 2.433436 GCTTGTCGGGGAAGTTAATGT 58.567 47.619 0.00 0.00 0.00 2.71
3249 5136 1.743394 GGCTTGTCGGGGAAGTTAATG 59.257 52.381 0.00 0.00 0.00 1.90
3250 5137 1.633945 AGGCTTGTCGGGGAAGTTAAT 59.366 47.619 0.00 0.00 0.00 1.40
3251 5138 1.061546 AGGCTTGTCGGGGAAGTTAA 58.938 50.000 0.00 0.00 0.00 2.01
3252 5139 1.061546 AAGGCTTGTCGGGGAAGTTA 58.938 50.000 0.00 0.00 0.00 2.24
3253 5140 0.185175 AAAGGCTTGTCGGGGAAGTT 59.815 50.000 0.00 0.00 0.00 2.66
3254 5141 0.185175 AAAAGGCTTGTCGGGGAAGT 59.815 50.000 0.00 0.00 0.00 3.01
3255 5142 0.881796 GAAAAGGCTTGTCGGGGAAG 59.118 55.000 0.00 0.00 0.00 3.46
3256 5143 0.183971 TGAAAAGGCTTGTCGGGGAA 59.816 50.000 12.62 0.00 0.00 3.97
3257 5144 0.183971 TTGAAAAGGCTTGTCGGGGA 59.816 50.000 12.62 0.00 0.00 4.81
3258 5145 1.036707 TTTGAAAAGGCTTGTCGGGG 58.963 50.000 12.62 0.00 0.00 5.73
3259 5146 1.407258 TGTTTGAAAAGGCTTGTCGGG 59.593 47.619 12.62 0.00 0.00 5.14
3260 5147 2.357637 TCTGTTTGAAAAGGCTTGTCGG 59.642 45.455 12.62 0.00 0.00 4.79
3261 5148 3.548818 CCTCTGTTTGAAAAGGCTTGTCG 60.549 47.826 12.62 0.00 0.00 4.35
3262 5149 3.632145 TCCTCTGTTTGAAAAGGCTTGTC 59.368 43.478 10.62 10.62 0.00 3.18
3263 5150 3.631250 TCCTCTGTTTGAAAAGGCTTGT 58.369 40.909 0.00 0.00 0.00 3.16
3264 5151 4.098501 ACTTCCTCTGTTTGAAAAGGCTTG 59.901 41.667 0.00 0.00 0.00 4.01
3265 5152 4.281657 ACTTCCTCTGTTTGAAAAGGCTT 58.718 39.130 0.00 0.00 0.00 4.35
3266 5153 3.903467 ACTTCCTCTGTTTGAAAAGGCT 58.097 40.909 0.00 0.00 0.00 4.58
3267 5154 5.966742 ATACTTCCTCTGTTTGAAAAGGC 57.033 39.130 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.