>input_sequence_55369
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-----------------------------------------------------------------------TCAGATCCG
CCGTTCCTTCGACTTGGCTGGCCGATCGATCCATGGACCGCCGGCCGCCGCTCGCCGTCTCCCCGCGCCGGCTCCGCCCG
CGGCCGAGCCACGCCGCCGCCGGCCGCCCGCCCTTGGCGTCCTCCGTCCACATTCCCTCGCCAGGTACGACGTCGCTCTG
CTCGGATCCCCGCGTCGAGT------------------------------------------------------------
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---------------------------------------------------------------------TTTTTTGGTTT
TGCTCCGTTTCTCTTTGATCTTTCTTTGGTGGGGTTCCTCCTGTTCGCGTTTCGATCCTGCTGTTCGATGCGTCACGATC
CTGTCATTTCATCTCGGTTTATTTACGGTCTCGATCAGCGACCAGATTGTTTCCGTCCCAGATCTGTTCAGAAATCCCCC
CTAGTTCAGAAACGATTTCTGTTTCTCTTCTGATGATAAATGCACGATTCAGTTCTGCCTTTTTTG-----TACAACCGT
AGAATCTTA-----AAGTTTTGAATTCTCACTGATTTGTTCTCGCTGTACGGATCCGTCCGCTGTGCAGGATTTAGCAAG
AAAGCTCAGAC-GCCGATGCGCTCGTCCATCTGCGCTCTGCCGCCGCCGTCGTCCTACTCCTCCTA---------CCTCG
AGACCAGCCCGCGCCCGAAGCCGGACTTCGCCGC---TGCGACAAGAGCTGCGGGGAAGGAGAACCTCCACTTCCAAGAC
GCCGACGACGGCGACGAGGC------GGTGCCTTTCAACCTCGCCGACGCGAGCACGGACGACTGGGCAGCGGCGGTGGC
GCCGACCAGCCCGCTGTTCGAGAGGGGCAGGCTCTACGACCTCTACTCGGCGCGGCGCAACGAGCGGCTCAAGCGCAAGC
ACGGCTGGTACGCCGCCGGCGAGGAGGAGGCGGGGGCCATGGCCGAGGACCCTTGCGTGGCCGTGGAGCTGTCCAAGCGG
CGGGGCGCCAAGAAGGCGGC---CGGGGCCCCCGAGTCCGCGGTGAGGAGGTCGATGCCGGCCGCAGCAGCAGCA---GA
GTTCTC------GCAGAGCTACAGGGCCGGCGGCGGCCTGAGCGCCATGAGGTCCTCGCTGAGGAGCAGCAAGGAGATGA
AGAAGCCCTCCGCCGCGTCGTCCTGCGCCACCGCCGCCAAGCCCTCGACGGCCAAGGGCAGGAGGGTTGGCTCGCAGTCG
TCCGTTCGCAGGATCTGATGATGATCCGTGTGCTGCTGGAAATGACATGGCGGCTGTGTGCTTCTTCCTCCTTGGTTCAT
CGTTCGATGGTTGGGTTGTTGATAAACAGTACTAGTGCTACTAGTGTGGAGCTTGGAACTGGTTTGGGGGCAATATAGCT
GCGTATTTGGT---------------------------------------------------------------------
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--------------------------------------------------------
>chr2A_1_TraesCS2A01G195500
TTATACCCA-----------------------------------------------------------------------
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------------------------------------------------CAAACATTTTTTGAATTCACAAATATTTTTAA
ATTCCTGGATAAT------------------TTTTTAAATATGGAAATATTGTCTTGAGTATTTTTAAATATTTTTTGAA
TGTTTGAACATTTTATCAAATTCATGAACAAATTTTTAGATGCTGTATTTCTTTTTTAGAATTCGTGAACATTTTTTTCA
GACTTGTAGACAGTTTTTTCATTAATGTTTTTTTGTATTTCCAGTTCATGAGCATTTTTTAATATCAATATTTTTAATTG
CACGAATGTTATTGAAACATGTGAACATTTTTCAAATCCACAAACATATTTCCAACTTCTTTAAAATGAAAATGTTCAGA
ATTCATGATTATTCATTTTGATTTTTTTGGATTCACGAATATTTTTTAATTTGCATACAATGTTTAAATTCCACAATCTT
TT----TTAATTCAATATTTTTCTTTCAAATTCAT--ATATTTTTGTATTTTCGGTTTTCTGAAGTAGCAACCATTTTTG
AATTCGTGAACAGTTTTCAAACTTACATTTGTTTAATTTTCTAAAAA-TTCTAATTCAGAAACATTTTTTT---GTATCA
GTGACTGCCGACATTTTTTAACCGGCAAAAACCATTTTTTAAATGAAAATAAACCGGCCGAAATAAGGAAATGT------
-------------------------TGTGAAAAGATAATAATGGAAAGAGAAAAGGAAATAGGAACTCGACGCGGAGCGA
CGCGTCCGCTC-ACAGCCCTCGGAACAGAACAACAACATTCGGGTCGGGACAATTCAAAAGACCAAATCAGACCGTTGGA
GCCTCCTCCCCTGCGCCCACCTCTCCTCCCCTTATTAAAACCTCGTCATCCACCCGAGGAGAGAGAATCGATCCACCACG
CCACCCACGCCACCGCCGCCGCCGCCGCTGCCGCCGTCGCACCGGGTAGGTTTCGATATCTTGCTTTCCCGACGGCTCCT
TGGCGGCGTCTTCTCGGCCTTCTCGATCTGATT-----------ACAACTCATCTTCCTGTTTGCC-CCCCTCAGATCCG
CCGTTCCTTCGACTTGGCTGGCCGATCGATCCATGGACCGCCGGCCGCCGCTCGCCGTCTCCCCGCGCCGGCTCCGCCCG
CGGCCGAGCCACGCCGCCGCCGGCCGCCCGCCCTTGGCGTCCTCCGTCCACATTCCCTCGCCAGGTACGACGTCGCTCTG
CTCGGATCCCCGCGTCGAGT------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTTTTGGTTT
TGCTCCGTTTCTCTTTGATCTTTCTTTGGTGGGGTTCCTCCTGTTCGCGTTTCGATCCTGCTGTTCGATGCGTCACGATC
CTGTCATTTCATCTCGGTTTATTTACGGTCTCGATCAGCGACCAGATTGTTTCCGTCCCAGATCTGTTCAGAAATCCCCC
CTAGTTCAGAAACGATTTCTGTTTCTCTTCTGATGATAAATGCACGATTCAGTTCTGCCTTTTTTG-----TACAACCGT
AGAATCTTA-----AAGTTTTGAATTCTCACTGATTTGTTCTCGCTGTACGGATCCGTCCGCTGTGCAGGATTTAGCAAG
AAAGCTCAGAC-GCCGATGCGCTCGTCCATCTGCGCTCTGCCGCCGCCGTCGTCCTACTCCTCCTA---------CCTCG
AGACCAGCCCGCGCCCGAAGCCGGACTTCGCCGC---TGCGACAAGAGCTGCGGGGAAGGAGAACCTCCACTTCCAAGAC
GCCGACGACGGCGACGAGGC------GGTGCCTTTCAACCTCGCCGACGCGAGCACGGACGACTGGGCAGCGGCGGTGGC
GCCGACCAGCCCGCTGTTCGAGAGGGGCAGGCTCTACGACCTCTACTCGGCGCGGCGCAACGAGCGGCTCAAGCGCAAGC
ACGGCTGGTACGCCGCCGGCGAGGAGGAGGCGGGGGCCATGGCCGAGGACCCTTGCGTGGCCGTGGAGCTGTCCAAGCGG
CGGGGCGCCAAGAAGGCGGC---CGGGGCCCCCGAGTCCGCGGTGAGGAGGTCGATGCCGGCCGCAGCAGCAGCA---GA
GTTCTC------GCAGAGCTACAGGGCCGGCGGCGGCCTGAGCGCCATGAGGTCCTCGCTGAGGAGCAGCAAGGAGATGA
AGAAGCCCTCCGCCGCGTCGTCCTGCGCCACCGCCGCCAAGCCCTCGACGGCCAAGGGCAGGAGGGTTGGCTCGCAGTCG
TCCGTTCGCAGGATCTGATGATGATCCGTGTGCTGCTGGAAATGACATGGCGGCTGTGTGCTTCTTCCTCCTTGGTTCAT
CGTTCGATGGTTGGGTTGTTGATAAACAGTACTAGTGCTACTAGTGTGGAGCTTGGAACTGGTTTGGGGGCAATATAGCT
GCGTATTTGGTTACATAATTGATAATCCGATTCGTTGATTTCTTGTGTGCGTGTTTGGTTACAGAATCTGATAATTTAGG
GCGGTGATTTGTTCTTGACGAATGAGGCAATAACGCAGGCAAATTGGTTGATTGGTTCAGTACTTCAGTTTGTGAGGTGG
GCAACTTGGAACGCCAGGATCAATAACCATGTCTCGTCCTCCGTCAGTCGATCACGTGTTCAATAG-ACTTTCTTCATCC
GAAAATACCTGTCGAAAAAATAATAAAAATAGATGTATTTGAAATTAAACTACATCTAGATCATTTCTTCGACAAGTATT
TTCGAAGGGAGT----ATCAAAGAGCACACAAGTATCGAAGGCGGTGGCTCACGGTCATTGGTTCATAAGGCCTGCGATT
GCCCGGGGCGTCGCAGGCGGCCTCCTCCAGGTCCCGTGTCGGGACAATGGAACGGGCCGAAACCGCGGGAGAGCAGCGGC
AAATAAATTTGATGACCGTCATTGGACAACCAAAAATTTCCAGATCATTGAGTTTGCCTTAAAGTTGTCCTTTTCAAAGG
CCGATCACTCCGAATGATTAATAGAGCACGAGCTCAAGGGAGCCCGTTTCAAAAATATCATATTTTCATAGCGCAAAATT
ATTTTGAAAAAAACCCTCAAAATTATTTTGAAAAAAATACATACAGAAATACATGCATAAAAATGGATGCATACATACAG
AAATACATACATACATACATACAGAAATACATGCATGAAAAAAATACATACAGAAATACAGAATAAGTTTCCTGACATAG
CGCAAAATTAGCCAACTACATACATGAAAATGGGCCAATTTTTTTTGTTTGTTAGTTGCTGGGATTTTCTTTTGTTTTTG
CACACCTTGCAAATCATAATACTCACTTCGTCCGGAATTACTTACTGCGGAAATGTATAAAAATGGATGTATTAAAACTA
AAGTACATCTAGACACATTAACTTCCCCGACAAGCCTTTTCAAACAGAGGAAGTAT
>chr2B_1
GACGCGTCCGCTCACAGTCCTCGGAACAGAACAACGTTCGGGTCGGGACAATTCAAAAGACCAAATCAGACCGTTGGAGG
CTCCTCCCCTGCGTCCCCCTCTCCTCCCCTTAGGATGTGTTTGGTTCAAGGGAGATGCTAGGGTGGCTAAGGGTATCCCT
ATCCAGCTGGTTAGAGATAGCCATTTTTTATGTTTGGTTGATGGATGAAGTTAGCCTATATTTTGTTTGGTTGTGAAGGA
TAAAGCATGGTTAGGATAGCCACTGATTTCCTGTTCCTTTTCCCCTTTCGGCTGATGTAGGACAAAATTAATCAAAGAAC
CAGTATTTTGGGGAGATTATCAAATGAAACACATCAGTATACCATGCACACATATACACCACGCACATGCGAGAACGGCA
AGCGCGGCCCACACGCCCGGCCGGCAGCCCGGCAACCAGGCCTGGCGTACAACACGCGCAGCAGGCACGTCAGGCAAGCA
CGTCCAACGCGCAGCCGGCAGACACGCCCAATACGCAGCGCGTGCAGCACGCTCGACCTCCATCTGCAGGGCTCCGTCGC
ATGACACTCACCTGTCTGCCGCCGCCATGACCGCTGCTAGGTTGCAGCTCAGCAGCTCCAATGAAAGAAATGACAAAGGA
AGGAGAGAAGGCACGCCAAGTAAGAAGATAGGGAAGGGGAGATCCATACTGCCGGGCATTGATCTCCGTCGCCGTGCTTC
GATTTCTACGGCCGCCGCCGCCGCCGCAGGAGAGAACAGAGCTAGACGAAATCGGGGGTGTAGAGAAAAACGTTTCGTGG
CTTGCTTCGCGTCACGCGCGCGCCGGGATACGCAGGTCCGCGAGATTTTCGCGGACGCGCTCAGCCTCATTTTCGAAGAA
TATTCTCAGCATCCGGCTATCCCTATCCCAACTCGCCCACGAACCAAACGAATGGCATCCAGAAAAAAATGGCTATCCCT
GTCCCAGGGTGGGATAGCCCAGCAACCAAACGCATCCTTATTAAAACCTCGTCATCCACCCAAGGAGAGAGAAGCCACTA
TGCCACCGCCGCCGCCGCCACCGCAGCACCGGGTAGTTTTTGATATCTTGCTTTCTCGACGGTTCCTTGGCAACGGGTAG
GTTTTTTTTGTCTTACCTTGTCAAGTTTAATGATCGTGGCTCTCTAATTTGCGAGTTCGTGGCTGAACAGTAAACATGCG
TTCCAAATTTGTATACCAACTTTTACCAACAAATTTTGGTTGTTCTCTACAGATCGATGTGATCGTCCACAAGCATGCCG
ACCTGGTCACGCTCATTAAATGGTTGGAGCATTCCTGCAAGCAGTTTTCCAAAACGGTTCACGGAAGGTTTTGGAAGCTT
CTCATCCAATTTTGGGAAACTCCCACACTGTTTTTTTCCTTCCCTATTTTATGTTTTTCCTCCTATTTTTTCTTTTGCCT
TTTCGTTTCATTTGGTTTTATCTTTTCCCTTTCTCTTTCTTATTTTCCTTTTCTTTATCTTTTGAAAAAATCATGAGTAT
TGTTTGAATTTGCAAACTCTTTTCAATCAATGAATATTTTTATACCTGCAAACATTTTTTGAATTCACAATTATTTTTAA
ATTCCTGGAATTGTTTTCAAAATTGCACATATTTTTAAATATGGAAATATTTTCTTGAA-ATTTTTAAATATGTTTTGAA
TGTTTGAACATTTTGAT---------AACAAATTTTTAGATGCTCTATTT----TTTAGAATTGATGAACATA--TTCCA
GACTCGTAGACAGTTTTTTCATTAC---TTTTTTTGATTTCCAATTCATGAGCAT---------------TTTTTAATTG
CACGAATGTTCTTGAAACATGTGAACAATTTTCAAATCCACAAACATATTTCCAACTTCTTGAAAATAAAAATTGTCAGA
ATTCGTGATTATTCATTTTGATTTTTGTATTTTTTTGGTTAATTTAATATTTTTCCAACTTCTTGAAACATGAGAACATA
TTCCGGTTAATTCAATATATTTCCTTGAAAATTCATGATATTTTTTTATTTTCATTTTTCTGAAGTAGCAACCATTTTTG
AATTCGTGAACAGTTTTCAAACTTACACTTGTTTAATTTTCGAACCTTTTCTAATTCAGAAACATTTTTTTTTTGTAACA
GTGGATGTTGACATTTTTTAACCGGCAAAAAAC-TTTTTTAAATGAAAATAATCCGGCCGAAATAAGAAGATGTACATCC
GCAAAAAAAAGAAATAAGAAGATGCTGTGAAAAGTTAATGGAAAAAG-----AAAACAATAGGAACTCGACGCGGAGCGA
CGCGTCCGCTTTACAGCCCTCGGAACAGAACAACG---TTCGGGTCGGGACAATTCAAAAGACCAAATCAGACCGTTGGA
GCCTCCTCCCCTGCGCCCACCTCTCCTCCCCTTATTAAAACCTCGTCATCCACCCGAGGAGAGAGA----ATCCACCACG
CCACCCACGCCACCGCCGCCGCCGCCGC---------CGCACCGGGTAGGTTTCGATATCTTGCTTTCTTGACGGTTCCT
CGGCAGCGGCTCCTCGGCCTTCTCGATCTGATT-----------ACAACTCATCTTCCTGTTTGCCTCCCCTCAGATCCG
CCTTTCCTTGC-CTTGGTTGGCCGATCGATCCATGGACCGCCGGCCGCCGCTCGCCGTCTCGCCTCGTCGGCTCCGCCCG
CGGCCGAGCTACGCCGCCGCCGCCCGCCTGCCCTTGGCGTCCTCCTTCCACATCCCCTCGCCAGGTACCACGTCGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGGTTT
TGCTCCGTC-CTCT-GGATCTTTCTTTGGTGGAGTTCCTTCTGTTCGCGTTTCGATCCTGTTGTTCGATGCCTCAAGATC
CTGTTGTTTTGTTTAGTTTCATTTACGGTCTCCATCAGAAACCAGATTGTTTCCTTCGCAGATCTATTCAAAAATCCTCC
CTGGTTCTGCAACCAGTTCTGTTTCTCTGATGATGATAAAAGCACGATTCGATTCTTC---TTTTG-----CACAATCGT
AGAATAGAATTGTTAACTTTTGAATTCTCACAGATTTGTTCTCGTTGTACTGTCCCGTCCGTTGCGCAGGATTTAGCAAG
AAAGCCCAGACTT-CGATGCGCTCGTCCATCTGCGCTCTGCCGCCGCCGTC------------CTA---------CCTCG
AGACCAGCCCGCGCCCCAAGCCGGACTTCACT---GTTGCGGCAAGAGCTGCGGGGAAGGAGAACCTCTGCTTCAA----
--CGACGACGACGAGGAGGC------GGCGCCTTTCAACCTCGCCGACACGAGCACGGACGACTGGACAGCGGCGGTGGC
GCCGACCAGCCCGCTGTTCGAGAGGGGCAGGCTCTACGACCTCTACTCCGCGCGGCGCAACGAGCGGCTCAAGCGCAAGC
ACGGCTGGTACGCCGCCGGCGAGGAGGAGGCGGGGGCCATGGCCGAGGACCCTTGCGTGGCCGTGGAGCTGTCCAAGCGG
CGGGGCGCCAAGAA---GGC---CGCGGCCCCCGAGTCCGCGGTGAGGAGGTCGATGCCGGCAG---CGACAGCA---GA
GTTCTC------GCAGAGCCACAGGGCCGGCGGCGGCCTGAGCGCCATGAGGTCCTCCCTGAGGAGCAGCAAGGAGATGA
AAAAGCCCTCCGCCGCGTCGTCCTGCGCCACTGCCGCCAAGCCCTCCGCGGCCAAGGGCAGGAGGGTCGGCGCGCAGTCG
TCGGTTCGCAGGATCTGATGATGATCTGTGTGCTGCTGGAAATGACATGG-----------TTCTTCTTCCTTGGTTCAT
CGTTGGATGGTTGGG-TGTTGATAAACAGTACTAGTGCTACTAGTGTGGAGTTTGGAACTGGTTTGGGGGCAATATAGCT
GCGTATTTGGTTACATAATTGATAATCCGATTCGTTGTTTTCTCGTGCGCGTATTCGGTTACAGAATCTGATAATTTAGG
GCCATGATTTATTCTTGACGACTGAGGCAACAACACAGGCAAAATGGTT-------------------------------
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>chr2D_673
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--------------------------------------------------AAAAAAAAACAGTAACTCGACGCGGAGCGA
CGCGTCCGCTC-ACAGCCCTCGGAACAGAACAACG---TTCGGGTCGGGACAATTCAAAAGACCAAATCAGACCGTTGGA
GGCTCCTCCCCTGCGTCCACCTCTCGTCCCCTTATTAAAACCTCGTCATCCACCCGAGGAGAGAGAATCAATCCACCACG
CCACC------------GCCGCCGCCGC---------CGCACCGGGTAGGTTTTGATATCTTGCTTTCTCGACGGTCCCT
TGGCGGCGTCCTCTCGATCTTCTCTGTGGTTCATTTTGGTTCTCACAACTCGTCTTCTTGTTTGCC-CCCCTCAGATCCG
CCGTTCCTTCGTCTTGGTTGGCCGATCGATCCATGGACCGCCGGCCGCCGCTCGCCGTCTCGCCGCGCCGGCTCCGCCCG
CGGCCGAGCCACGCCGCCGCCGGCCGCCCGCCCTTGGCGTCCTCCGTCCACATCCCCTCGCCAGGTACCACGTCGCTCTG
CTCGGATCCCCGCGTCGAGT------------------------------------------------------------
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---------------------------------------------------------------------TTCTTTGGTTT
TGCTCCGTTTCTCT-TGATCTTTCTTTGTCGGAGTTCCTGCTGTTCGCGTTTCGATCCTGTTGTTCGGTGCCTCAAGATC
CGGTTGTTTTGTTTAGTTTTATTTACGGTCTCCATCAGCAACCAGATTGTTTCCTTTCCAGATCTGTTCAGAAATCCTCC
CTAGTTCAGAAACGATTTCTGTTTCTCTGAT---GACAAAAACACGATTCAGTTCTGC---TTTTTTGTACTACAACCGT
AGAATCTTC-----AAGTTTTGAATTCTCACAGATT---------TGTACTGATCCGTCCACTGTGCAGGATTTAGCAAG
AAAGCTCAGAC-GCCGATGCGCTCGTCCATCTGCGCTCTGCCGCCGCCGTCGTCCTACTCCTCCTA---------CCTCG
AGACCAGCCCGCGCCCGAAGCCGGACTTCACCGTCGTCGCGACAAGAGCTGCGGGGAAGGAGAACCTCCACTTCCAAGAC
GCCGACGACGCCGACGAGGC------GGTGCCTTTCAACCTCGCCGACACGAGCACGGACGACTGGACGGCGGCGGTGGC
GCCGACCAGCCCGCTGTTCGAGAGGGGCAGGCTGTACGACCTCTACTCCGCGCGGCGCAACGAGCGGCTCAAGCGCAAGC
ACGGCTGGTACGCCGCCGGCGAGGAGGAGGCGGGGGCGATGGCCGAGGACCCTTGCGTGGCCGTGGAGCTGTCCAAGCGG
CGGGGCGCCAAGAA---GGCGGCCGGGGCCCCCGAGTCCGTGATGAGGAGGTCGATGCCGGCCG---CACCAGCG---GA
GTTCTC------GCAGAGCTACAGGGCCGGCGGCGGCCTGAGCGCCATGAGGTCCTCGCTGAGGAGCAGCAAGGAGATGA
AGAAGCCCTCCGCCGCGTCGTCCTGCGCCACTGCCGCCAAGCCCTCCGCGGCCAAGGGCAGGAGGGTTGGCTCGCAGTCG
TCGGTCCGCAGGATCTGATGATGATCTGTGTGCTGCTGGAAATGACATGG-----------TTCTTCTTCCTTGGTTCAT
CGTTGGATGGTTGGG-TGTTGATAAAGAGTACTAGTGCTACTAGTGTGGAGATTGGAACTGGTTTGGGGGCAATATAGCT
GCGTGTTTGGTTACATAATTGATAATCTGATCCGTTGATATCTCGTATGCGTATTCGGTTACAGAATCTGATAATTTAGG
GCGATGATTTATTCTTGACGAATGAGGCAACAACGCAGGCAAATTGGGTGATTGGT--------TCAGTTTGTGAGGTGG
TCCGCTTGGAACGCCACGATCTTCAACCATGTCTCGTCCTCCATAAGTCTATCACGTGTTCCATAGTACTCCCTCCATCC
GCAAATAATTGTTGAAAAAA--------ATAAATGTATCTAAAACTAAAACATATCTAAATCATTGCTTCTACAAGTATT
TTCGAACGGAGAGAGCATCAGAGAGCACAAAAGCATCGGAGGCGGCGGCTCGTGGTTGTCGGTCCATAAGGCTTGCGATT
GCCC----------------------------------------------------------------------------
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>chr5B_1447
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----------------GTTTTGAATTCTCACAGATTTGTTCTCGTTGTACTGATCCGTCTGTTGTGCATGATTTAGCAAG
AAAGCTCAGAC-GCCGATGCGCTCGTCCATCTACGCTTTGCCGCCGTCGTC------------CTACTCCTCCTACATTG
AGACCAGCCCGCGCCCCAAGCCGTACTTCACCGT---TGCCACAAGGGCTGCAGGAAAGGAGAACCTCCACTTCCA----
--TGACGCCGACGAC---GCCGACGAGGCGCCTTTCGACCTCACCGACGCGAGCACGGACGACTGGGCAGCGACGGTGGC
GCCGACCAGCCCGCTGTTCGAGATGGGCAGGCTCTACGACCTCTACTCCGCGGGGCGCAACGAGCGGCTCAAGCACAAGC
ACGGCTGGTACGCCGCTGGCGAGGAGGAGGCGGGGTCCATGGCCGAGGACCCTTGCATGGTCGTA---------------
---------------------------------GAGCCCCTGCTGAGGAGGTCGATGCCGGCAG---CAGCAGCAGCCGA
GTTCTCGCAGAGGCAGAGCTACAGGGCCAGCGGCGGCCTGAGCGCCATGAGGTCCTCGCTGAGGA---------------
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>chr4A_1467
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------------------------------------TGTTCTCGATGTACTGATCCGTCCGTTGTGCATGATATAGCAAG
AAAGCTCACACAGCCGATGCGCTCGTCCATCTACGCTTTGCCGCCGTCGTC------------CTACTCCTCCTACCTTG
AGACCAGCCCGCGCCCCAAGCCGTACATCACCGT---TGCCACAAGGGCTGCGGGAAAGGAGAACCTCCACTTCCA----
--TGACGCTGACGAC---GA------GGCTCCTTTTGACCTCACCGACGCGAGCACGGACGACTGGGCAGCGGTGGTGGC
GCCGACCAGCCAGCTGTTCGAGAGGAGCAGGCTCTACGACCTCTACTCCGCGGGGCGCAACGAGCGGCTCAAGCGCAAGC
ATGGCTCGTACGCCGCCGGCGAGGAGGAGGCGGAGGCCATGGCCAAGGGCCCTTGCGTGGCCGTGGAGCTGTCCAAGTGG
CGGGGCGCCAAGAA------GGCCGGGGCCCCCGAGCCCCTGCTGAGGAGGTCGATGCCGGCAGTAGCAGCAGCA---AA
GTTCTC------GCAGAGCAACAGGGCCAGCGGTGGCCTGAGCGCCATGAGGTCCTAGCTGAGGA---------------
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>SNPs
SSSSSSS-S-----------------------------------------------------------------------
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----------------------------------------------------------------------S---------
---------SSSS--------------------------------------S------SS------------S-------
--------------SSSSSSSSSSSS------------------S-----SSSS---------SS-------SSS--S--
----S-------------------SSSS------SS-------S-----------SSSSSSSSSSSSSSS----------
----------S----------------S---------------------------------S-----S-----SS-----
----S---------------------S-SSS--SSS-SS--S---SSS----SSSS-SSS-S--S---SSSS-S--SS-S
------------------S----S--S---S-SSS----------S-------SS-------------------------
---------------------------S-------------S--SSS------------------------------S--
---SS--SS----------------------S-S------------------S--------------S-S----------
----------------------------------S----SSSSS--SSSS----SS------------------------
----------------------------------SSSS------------------------------------------
---------------------------------------------------------------------S----------
----------------------------SSSSSSSSS-------------------------------S------S----
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-----------S-----S-------------------------------------------S------------------
-----------------------------------------------------S--------------S-----------
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--------------S-----------------S------S--------------------S----------S---S----
----SS---SS-S-S-S---------------S------S--------------S----------------------S--
----------------------------SS----------S-----------------SSS-------------------
-------------------------------S------------S-----S-----------------------------
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-----------------------------S---S----------------------------------------------
----------S---------------------------------------------------------------------
------------------------------------------------S-------------------------------
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--------------SSS-----------------------------------------------S---------------
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-------------------------------S--------------SS--------------------------------
--S-----------------------S-----------------------SSSSSSSSSSS------S------------
----S----------S-----------------------------------S----------------------------
-------------------------------------------S--------S--S------------------------
---S------S-------------------S-------------------------SSSSSSSS----------------
S-SS------------S----SSS------------------S-S----S-----------S--------SS--S-----
-S-----SS---S-------SSSSSSSS---S------S-S---S----SS-S-----S------S----S---------
------S----S--------S--------S---S----S------S-----SS---SS-S---S--------S-------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2556
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--------------------------------------------------------TATCTTGCTTTCCCGACGGC----
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>reverse_4719
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------------------------------------------------------------------------------GG
CCGATCACTCCGAATGAT--------------------------------------------------------------
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