Multiple sequence alignment - TraesCS2A01G158500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G158500 chr2A 100.000 2441 0 0 1 2441 105499899 105497459 0.000000e+00 4508.0
1 TraesCS2A01G158500 chr2A 98.876 356 4 0 2 357 422918871 422919226 9.520000e-179 636.0
2 TraesCS2A01G158500 chr2A 98.072 363 6 1 2 363 376678583 376678221 4.430000e-177 630.0
3 TraesCS2A01G158500 chr2A 98.072 363 6 1 2 364 598652769 598653130 4.430000e-177 630.0
4 TraesCS2A01G158500 chr2D 84.805 2073 146 73 460 2441 109725913 109723919 0.000000e+00 1927.0
5 TraesCS2A01G158500 chr2B 88.415 1407 83 37 457 1840 159256875 159255526 0.000000e+00 1622.0
6 TraesCS2A01G158500 chr2B 83.980 593 39 28 1883 2441 159255454 159254884 3.600000e-143 518.0
7 TraesCS2A01G158500 chr2B 100.000 37 0 0 380 416 159257268 159257232 4.360000e-08 69.4
8 TraesCS2A01G158500 chr4A 99.432 352 2 0 2 353 375243550 375243901 7.360000e-180 640.0
9 TraesCS2A01G158500 chr3A 99.155 355 3 0 2 356 68268400 68268754 7.360000e-180 640.0
10 TraesCS2A01G158500 chr3A 99.432 352 2 0 2 353 255129445 255129796 7.360000e-180 640.0
11 TraesCS2A01G158500 chr5A 98.880 357 4 0 2 358 405069048 405068692 2.650000e-179 638.0
12 TraesCS2A01G158500 chr1A 99.153 354 3 0 2 355 311863433 311863786 2.650000e-179 638.0
13 TraesCS2A01G158500 chr6A 99.150 353 3 0 2 354 451697451 451697803 9.520000e-179 636.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G158500 chr2A 105497459 105499899 2440 True 4508.000000 4508 100.000000 1 2441 1 chr2A.!!$R1 2440
1 TraesCS2A01G158500 chr2D 109723919 109725913 1994 True 1927.000000 1927 84.805000 460 2441 1 chr2D.!!$R1 1981
2 TraesCS2A01G158500 chr2B 159254884 159257268 2384 True 736.466667 1622 90.798333 380 2441 3 chr2B.!!$R1 2061

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.110486 ACTGGGGACATGTTGGTGTC 59.89 55.0 0.0 0.0 46.04 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1789 2135 0.033504 ATCTGCGGCCGGTAACATAG 59.966 55.0 29.38 5.34 0.0 2.23 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.677319 ACGATCTCATGGTCTAAGGAAAA 57.323 39.130 0.00 0.00 0.00 2.29
24 25 5.665459 ACGATCTCATGGTCTAAGGAAAAG 58.335 41.667 0.00 0.00 0.00 2.27
25 26 5.422331 ACGATCTCATGGTCTAAGGAAAAGA 59.578 40.000 0.00 0.00 0.00 2.52
26 27 6.098982 ACGATCTCATGGTCTAAGGAAAAGAT 59.901 38.462 0.00 0.00 0.00 2.40
27 28 7.287927 ACGATCTCATGGTCTAAGGAAAAGATA 59.712 37.037 0.00 0.00 0.00 1.98
28 29 7.596995 CGATCTCATGGTCTAAGGAAAAGATAC 59.403 40.741 0.00 0.00 0.00 2.24
29 30 7.979786 TCTCATGGTCTAAGGAAAAGATACT 57.020 36.000 0.00 0.00 0.00 2.12
30 31 8.380742 TCTCATGGTCTAAGGAAAAGATACTT 57.619 34.615 0.00 0.00 0.00 2.24
31 32 8.260818 TCTCATGGTCTAAGGAAAAGATACTTG 58.739 37.037 0.00 0.00 0.00 3.16
32 33 8.146053 TCATGGTCTAAGGAAAAGATACTTGA 57.854 34.615 0.00 0.00 0.00 3.02
33 34 8.041323 TCATGGTCTAAGGAAAAGATACTTGAC 58.959 37.037 0.00 0.00 0.00 3.18
34 35 7.311092 TGGTCTAAGGAAAAGATACTTGACA 57.689 36.000 0.00 0.00 30.76 3.58
35 36 7.918076 TGGTCTAAGGAAAAGATACTTGACAT 58.082 34.615 0.00 0.00 30.76 3.06
36 37 8.383175 TGGTCTAAGGAAAAGATACTTGACATT 58.617 33.333 0.00 0.00 30.76 2.71
37 38 8.669243 GGTCTAAGGAAAAGATACTTGACATTG 58.331 37.037 0.00 0.00 30.76 2.82
38 39 8.669243 GTCTAAGGAAAAGATACTTGACATTGG 58.331 37.037 0.00 0.00 0.00 3.16
39 40 8.602424 TCTAAGGAAAAGATACTTGACATTGGA 58.398 33.333 0.00 0.00 0.00 3.53
40 41 9.231297 CTAAGGAAAAGATACTTGACATTGGAA 57.769 33.333 0.00 0.00 0.00 3.53
41 42 8.477419 AAGGAAAAGATACTTGACATTGGAAA 57.523 30.769 0.00 0.00 0.00 3.13
42 43 8.477419 AGGAAAAGATACTTGACATTGGAAAA 57.523 30.769 0.00 0.00 0.00 2.29
43 44 8.923270 AGGAAAAGATACTTGACATTGGAAAAA 58.077 29.630 0.00 0.00 0.00 1.94
44 45 8.978539 GGAAAAGATACTTGACATTGGAAAAAC 58.021 33.333 0.00 0.00 0.00 2.43
45 46 9.750125 GAAAAGATACTTGACATTGGAAAAACT 57.250 29.630 0.00 0.00 0.00 2.66
46 47 9.750125 AAAAGATACTTGACATTGGAAAAACTC 57.250 29.630 0.00 0.00 0.00 3.01
47 48 8.697507 AAGATACTTGACATTGGAAAAACTCT 57.302 30.769 0.00 0.00 0.00 3.24
48 49 9.793259 AAGATACTTGACATTGGAAAAACTCTA 57.207 29.630 0.00 0.00 0.00 2.43
49 50 9.442047 AGATACTTGACATTGGAAAAACTCTAG 57.558 33.333 0.00 0.00 0.00 2.43
50 51 6.319141 ACTTGACATTGGAAAAACTCTAGC 57.681 37.500 0.00 0.00 0.00 3.42
51 52 5.827797 ACTTGACATTGGAAAAACTCTAGCA 59.172 36.000 0.00 0.00 0.00 3.49
52 53 6.321181 ACTTGACATTGGAAAAACTCTAGCAA 59.679 34.615 0.00 0.00 0.00 3.91
53 54 6.707440 TGACATTGGAAAAACTCTAGCAAA 57.293 33.333 0.00 0.00 0.00 3.68
54 55 6.503524 TGACATTGGAAAAACTCTAGCAAAC 58.496 36.000 0.00 0.00 0.00 2.93
55 56 5.519722 ACATTGGAAAAACTCTAGCAAACG 58.480 37.500 0.00 0.00 0.00 3.60
56 57 5.298276 ACATTGGAAAAACTCTAGCAAACGA 59.702 36.000 0.00 0.00 0.00 3.85
57 58 5.821516 TTGGAAAAACTCTAGCAAACGAA 57.178 34.783 0.00 0.00 0.00 3.85
58 59 5.164606 TGGAAAAACTCTAGCAAACGAAC 57.835 39.130 0.00 0.00 0.00 3.95
59 60 4.879545 TGGAAAAACTCTAGCAAACGAACT 59.120 37.500 0.00 0.00 0.00 3.01
60 61 6.050432 TGGAAAAACTCTAGCAAACGAACTA 58.950 36.000 0.00 0.00 0.00 2.24
61 62 6.708949 TGGAAAAACTCTAGCAAACGAACTAT 59.291 34.615 0.00 0.00 0.00 2.12
62 63 7.874016 TGGAAAAACTCTAGCAAACGAACTATA 59.126 33.333 0.00 0.00 0.00 1.31
63 64 8.167345 GGAAAAACTCTAGCAAACGAACTATAC 58.833 37.037 0.00 0.00 0.00 1.47
64 65 6.866179 AAACTCTAGCAAACGAACTATACG 57.134 37.500 0.00 0.00 0.00 3.06
65 66 5.808042 ACTCTAGCAAACGAACTATACGA 57.192 39.130 0.00 0.00 34.70 3.43
66 67 6.374565 ACTCTAGCAAACGAACTATACGAT 57.625 37.500 0.00 0.00 34.70 3.73
67 68 6.428799 ACTCTAGCAAACGAACTATACGATC 58.571 40.000 0.00 0.00 34.70 3.69
68 69 6.260493 ACTCTAGCAAACGAACTATACGATCT 59.740 38.462 0.00 0.00 34.70 2.75
69 70 7.024340 TCTAGCAAACGAACTATACGATCTT 57.976 36.000 0.00 0.00 34.70 2.40
70 71 5.950965 AGCAAACGAACTATACGATCTTG 57.049 39.130 0.00 0.00 34.70 3.02
71 72 5.408356 AGCAAACGAACTATACGATCTTGT 58.592 37.500 0.00 0.00 34.70 3.16
72 73 5.288712 AGCAAACGAACTATACGATCTTGTG 59.711 40.000 0.00 0.00 34.70 3.33
73 74 5.481472 CAAACGAACTATACGATCTTGTGC 58.519 41.667 0.00 0.00 34.70 4.57
74 75 4.634184 ACGAACTATACGATCTTGTGCT 57.366 40.909 0.00 0.00 34.70 4.40
75 76 5.746307 ACGAACTATACGATCTTGTGCTA 57.254 39.130 0.00 0.00 34.70 3.49
76 77 6.315091 ACGAACTATACGATCTTGTGCTAT 57.685 37.500 0.00 0.00 34.70 2.97
77 78 6.143496 ACGAACTATACGATCTTGTGCTATG 58.857 40.000 0.00 0.00 34.70 2.23
78 79 6.143496 CGAACTATACGATCTTGTGCTATGT 58.857 40.000 0.00 0.00 0.00 2.29
79 80 6.637254 CGAACTATACGATCTTGTGCTATGTT 59.363 38.462 0.00 0.00 0.00 2.71
80 81 7.167635 CGAACTATACGATCTTGTGCTATGTTT 59.832 37.037 0.00 0.00 0.00 2.83
81 82 9.459640 GAACTATACGATCTTGTGCTATGTTTA 57.540 33.333 0.00 0.00 0.00 2.01
82 83 9.464714 AACTATACGATCTTGTGCTATGTTTAG 57.535 33.333 0.00 0.00 0.00 1.85
83 84 8.082852 ACTATACGATCTTGTGCTATGTTTAGG 58.917 37.037 0.00 0.00 0.00 2.69
84 85 5.339008 ACGATCTTGTGCTATGTTTAGGA 57.661 39.130 0.00 0.00 0.00 2.94
85 86 5.918608 ACGATCTTGTGCTATGTTTAGGAT 58.081 37.500 0.00 0.00 0.00 3.24
86 87 6.349300 ACGATCTTGTGCTATGTTTAGGATT 58.651 36.000 0.00 0.00 0.00 3.01
87 88 6.258727 ACGATCTTGTGCTATGTTTAGGATTG 59.741 38.462 0.00 0.00 0.00 2.67
88 89 6.293081 CGATCTTGTGCTATGTTTAGGATTGG 60.293 42.308 0.00 0.00 0.00 3.16
89 90 5.192927 TCTTGTGCTATGTTTAGGATTGGG 58.807 41.667 0.00 0.00 0.00 4.12
90 91 4.584638 TGTGCTATGTTTAGGATTGGGT 57.415 40.909 0.00 0.00 0.00 4.51
91 92 4.523083 TGTGCTATGTTTAGGATTGGGTC 58.477 43.478 0.00 0.00 0.00 4.46
92 93 4.227300 TGTGCTATGTTTAGGATTGGGTCT 59.773 41.667 0.00 0.00 0.00 3.85
93 94 5.193679 GTGCTATGTTTAGGATTGGGTCTT 58.806 41.667 0.00 0.00 0.00 3.01
94 95 5.066505 GTGCTATGTTTAGGATTGGGTCTTG 59.933 44.000 0.00 0.00 0.00 3.02
95 96 5.193679 GCTATGTTTAGGATTGGGTCTTGT 58.806 41.667 0.00 0.00 0.00 3.16
96 97 5.297029 GCTATGTTTAGGATTGGGTCTTGTC 59.703 44.000 0.00 0.00 0.00 3.18
97 98 4.028993 TGTTTAGGATTGGGTCTTGTCC 57.971 45.455 0.00 0.00 0.00 4.02
98 99 3.396276 TGTTTAGGATTGGGTCTTGTCCA 59.604 43.478 0.00 0.00 33.12 4.02
99 100 4.044065 TGTTTAGGATTGGGTCTTGTCCAT 59.956 41.667 0.00 0.00 33.82 3.41
100 101 4.503714 TTAGGATTGGGTCTTGTCCATC 57.496 45.455 0.00 0.00 33.82 3.51
101 102 2.278245 AGGATTGGGTCTTGTCCATCA 58.722 47.619 0.00 0.00 33.82 3.07
102 103 2.025887 AGGATTGGGTCTTGTCCATCAC 60.026 50.000 0.00 0.00 33.82 3.06
103 104 2.290896 GGATTGGGTCTTGTCCATCACA 60.291 50.000 0.00 0.00 33.82 3.58
104 105 3.624777 GATTGGGTCTTGTCCATCACAT 58.375 45.455 0.00 0.00 33.90 3.21
105 106 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
106 107 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
107 108 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
108 109 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
109 110 3.629398 GGGTCTTGTCCATCACATCATTC 59.371 47.826 0.00 0.00 33.90 2.67
110 111 4.521146 GGTCTTGTCCATCACATCATTCT 58.479 43.478 0.00 0.00 33.90 2.40
111 112 4.574013 GGTCTTGTCCATCACATCATTCTC 59.426 45.833 0.00 0.00 33.90 2.87
112 113 4.574013 GTCTTGTCCATCACATCATTCTCC 59.426 45.833 0.00 0.00 33.90 3.71
113 114 4.472470 TCTTGTCCATCACATCATTCTCCT 59.528 41.667 0.00 0.00 33.90 3.69
114 115 5.662657 TCTTGTCCATCACATCATTCTCCTA 59.337 40.000 0.00 0.00 33.90 2.94
115 116 5.955961 TGTCCATCACATCATTCTCCTAA 57.044 39.130 0.00 0.00 0.00 2.69
116 117 6.505048 TGTCCATCACATCATTCTCCTAAT 57.495 37.500 0.00 0.00 0.00 1.73
117 118 6.293698 TGTCCATCACATCATTCTCCTAATG 58.706 40.000 0.00 0.00 0.00 1.90
118 119 6.100134 TGTCCATCACATCATTCTCCTAATGA 59.900 38.462 3.13 3.13 40.50 2.57
119 120 7.166851 GTCCATCACATCATTCTCCTAATGAT 58.833 38.462 7.28 7.28 45.40 2.45
128 129 6.685657 TCATTCTCCTAATGATGTGATCTCG 58.314 40.000 0.00 0.00 32.21 4.04
129 130 6.266330 TCATTCTCCTAATGATGTGATCTCGT 59.734 38.462 0.00 0.00 32.21 4.18
130 131 6.471233 TTCTCCTAATGATGTGATCTCGTT 57.529 37.500 0.00 0.00 0.00 3.85
131 132 7.582667 TTCTCCTAATGATGTGATCTCGTTA 57.417 36.000 0.00 0.00 0.00 3.18
132 133 7.767250 TCTCCTAATGATGTGATCTCGTTAT 57.233 36.000 0.00 0.00 0.00 1.89
133 134 7.821652 TCTCCTAATGATGTGATCTCGTTATC 58.178 38.462 0.00 0.00 0.00 1.75
134 135 7.448469 TCTCCTAATGATGTGATCTCGTTATCA 59.552 37.037 0.00 0.00 33.48 2.15
135 136 7.951591 TCCTAATGATGTGATCTCGTTATCAA 58.048 34.615 4.42 0.00 37.61 2.57
136 137 8.588472 TCCTAATGATGTGATCTCGTTATCAAT 58.412 33.333 4.42 0.00 37.61 2.57
137 138 8.654215 CCTAATGATGTGATCTCGTTATCAATG 58.346 37.037 4.42 0.00 37.61 2.82
138 139 9.415544 CTAATGATGTGATCTCGTTATCAATGA 57.584 33.333 4.42 0.00 37.61 2.57
139 140 7.649370 ATGATGTGATCTCGTTATCAATGAC 57.351 36.000 4.42 0.00 37.61 3.06
140 141 6.572519 TGATGTGATCTCGTTATCAATGACA 58.427 36.000 4.42 0.00 37.61 3.58
141 142 7.212274 TGATGTGATCTCGTTATCAATGACAT 58.788 34.615 4.42 0.00 37.61 3.06
142 143 7.383300 TGATGTGATCTCGTTATCAATGACATC 59.617 37.037 15.71 15.71 37.61 3.06
143 144 5.985530 TGTGATCTCGTTATCAATGACATCC 59.014 40.000 4.42 0.00 37.61 3.51
144 145 5.985530 GTGATCTCGTTATCAATGACATCCA 59.014 40.000 4.42 0.00 37.61 3.41
145 146 6.479990 GTGATCTCGTTATCAATGACATCCAA 59.520 38.462 4.42 0.00 37.61 3.53
146 147 7.172190 GTGATCTCGTTATCAATGACATCCAAT 59.828 37.037 4.42 0.00 37.61 3.16
147 148 6.849588 TCTCGTTATCAATGACATCCAATG 57.150 37.500 0.00 0.00 0.00 2.82
160 161 5.698741 ACATCCAATGTCCATAGTCAGAA 57.301 39.130 0.00 0.00 39.92 3.02
161 162 6.065976 ACATCCAATGTCCATAGTCAGAAA 57.934 37.500 0.00 0.00 39.92 2.52
162 163 6.484288 ACATCCAATGTCCATAGTCAGAAAA 58.516 36.000 0.00 0.00 39.92 2.29
163 164 6.375455 ACATCCAATGTCCATAGTCAGAAAAC 59.625 38.462 0.00 0.00 39.92 2.43
164 165 5.253330 TCCAATGTCCATAGTCAGAAAACC 58.747 41.667 0.00 0.00 0.00 3.27
165 166 5.009631 CCAATGTCCATAGTCAGAAAACCA 58.990 41.667 0.00 0.00 0.00 3.67
166 167 5.653769 CCAATGTCCATAGTCAGAAAACCAT 59.346 40.000 0.00 0.00 0.00 3.55
167 168 6.405065 CCAATGTCCATAGTCAGAAAACCATG 60.405 42.308 0.00 0.00 0.00 3.66
168 169 5.497464 TGTCCATAGTCAGAAAACCATGA 57.503 39.130 0.00 0.00 0.00 3.07
169 170 5.245531 TGTCCATAGTCAGAAAACCATGAC 58.754 41.667 0.00 0.00 44.97 3.06
178 179 6.835914 GTCAGAAAACCATGACTATCTGTTG 58.164 40.000 14.17 0.00 42.06 3.33
179 180 6.650807 GTCAGAAAACCATGACTATCTGTTGA 59.349 38.462 14.17 0.00 42.06 3.18
180 181 7.335422 GTCAGAAAACCATGACTATCTGTTGAT 59.665 37.037 14.17 0.00 42.06 2.57
181 182 7.550551 TCAGAAAACCATGACTATCTGTTGATC 59.449 37.037 14.17 0.00 36.54 2.92
182 183 7.335171 CAGAAAACCATGACTATCTGTTGATCA 59.665 37.037 0.00 0.00 34.32 2.92
183 184 7.884877 AGAAAACCATGACTATCTGTTGATCAA 59.115 33.333 3.38 3.38 34.32 2.57
184 185 6.992063 AACCATGACTATCTGTTGATCAAC 57.008 37.500 28.10 28.10 41.50 3.18
185 186 5.111989 ACCATGACTATCTGTTGATCAACG 58.888 41.667 28.55 23.04 43.94 4.10
186 187 5.105351 ACCATGACTATCTGTTGATCAACGA 60.105 40.000 28.55 26.46 43.94 3.85
187 188 5.461407 CCATGACTATCTGTTGATCAACGAG 59.539 44.000 28.55 24.84 43.94 4.18
188 189 4.424626 TGACTATCTGTTGATCAACGAGC 58.575 43.478 28.55 18.56 43.94 5.03
189 190 4.158579 TGACTATCTGTTGATCAACGAGCT 59.841 41.667 28.55 20.51 43.94 4.09
190 191 5.357032 TGACTATCTGTTGATCAACGAGCTA 59.643 40.000 28.55 20.52 43.94 3.32
191 192 5.826586 ACTATCTGTTGATCAACGAGCTAG 58.173 41.667 28.55 27.18 43.94 3.42
192 193 4.727507 ATCTGTTGATCAACGAGCTAGT 57.272 40.909 28.55 13.33 43.94 2.57
193 194 4.098055 TCTGTTGATCAACGAGCTAGTC 57.902 45.455 28.55 6.98 43.94 2.59
194 195 3.506067 TCTGTTGATCAACGAGCTAGTCA 59.494 43.478 28.55 10.88 43.94 3.41
195 196 4.022329 TCTGTTGATCAACGAGCTAGTCAA 60.022 41.667 28.55 10.18 43.94 3.18
196 197 3.987868 TGTTGATCAACGAGCTAGTCAAC 59.012 43.478 28.55 16.99 43.94 3.18
197 198 4.238514 GTTGATCAACGAGCTAGTCAACT 58.761 43.478 22.09 0.00 41.13 3.16
198 199 5.048294 TGTTGATCAACGAGCTAGTCAACTA 60.048 40.000 28.55 7.59 43.38 2.24
199 200 5.236655 TGATCAACGAGCTAGTCAACTAG 57.763 43.478 11.99 11.99 46.63 2.57
200 201 4.941873 TGATCAACGAGCTAGTCAACTAGA 59.058 41.667 19.03 0.00 46.80 2.43
201 202 4.948608 TCAACGAGCTAGTCAACTAGAG 57.051 45.455 19.03 11.89 46.80 2.43
202 203 3.690139 TCAACGAGCTAGTCAACTAGAGG 59.310 47.826 19.03 10.05 46.80 3.69
203 204 2.018515 ACGAGCTAGTCAACTAGAGGC 58.981 52.381 19.03 6.58 46.80 4.70
204 205 2.294074 CGAGCTAGTCAACTAGAGGCT 58.706 52.381 19.03 10.84 46.80 4.58
205 206 2.685897 CGAGCTAGTCAACTAGAGGCTT 59.314 50.000 19.03 1.20 46.80 4.35
206 207 3.878103 CGAGCTAGTCAACTAGAGGCTTA 59.122 47.826 19.03 0.00 46.80 3.09
207 208 4.260866 CGAGCTAGTCAACTAGAGGCTTAC 60.261 50.000 19.03 1.96 46.80 2.34
208 209 4.862371 AGCTAGTCAACTAGAGGCTTACT 58.138 43.478 19.03 3.99 46.80 2.24
209 210 4.642885 AGCTAGTCAACTAGAGGCTTACTG 59.357 45.833 19.03 0.00 46.80 2.74
210 211 4.202070 GCTAGTCAACTAGAGGCTTACTGG 60.202 50.000 19.03 0.00 46.80 4.00
211 212 3.100671 AGTCAACTAGAGGCTTACTGGG 58.899 50.000 0.00 0.00 0.00 4.45
212 213 2.168728 GTCAACTAGAGGCTTACTGGGG 59.831 54.545 0.00 0.00 0.00 4.96
213 214 2.043939 TCAACTAGAGGCTTACTGGGGA 59.956 50.000 0.00 0.00 0.00 4.81
214 215 2.162264 ACTAGAGGCTTACTGGGGAC 57.838 55.000 0.00 0.00 0.00 4.46
215 216 1.361543 ACTAGAGGCTTACTGGGGACA 59.638 52.381 0.00 0.00 39.59 4.02
216 217 2.022918 ACTAGAGGCTTACTGGGGACAT 60.023 50.000 0.00 0.00 41.51 3.06
217 218 1.207791 AGAGGCTTACTGGGGACATG 58.792 55.000 0.00 0.00 41.51 3.21
218 219 0.912486 GAGGCTTACTGGGGACATGT 59.088 55.000 0.00 0.00 41.51 3.21
219 220 1.282157 GAGGCTTACTGGGGACATGTT 59.718 52.381 0.00 0.00 41.51 2.71
220 221 1.004745 AGGCTTACTGGGGACATGTTG 59.995 52.381 0.00 0.00 41.51 3.33
221 222 1.463674 GCTTACTGGGGACATGTTGG 58.536 55.000 0.00 0.00 41.51 3.77
222 223 1.271926 GCTTACTGGGGACATGTTGGT 60.272 52.381 0.00 0.00 41.51 3.67
223 224 2.436417 CTTACTGGGGACATGTTGGTG 58.564 52.381 0.00 0.00 41.51 4.17
224 225 1.440618 TACTGGGGACATGTTGGTGT 58.559 50.000 0.00 0.00 41.51 4.16
225 226 0.110486 ACTGGGGACATGTTGGTGTC 59.890 55.000 0.00 0.00 46.04 3.67
226 227 0.401738 CTGGGGACATGTTGGTGTCT 59.598 55.000 0.00 0.00 46.02 3.41
227 228 1.628340 CTGGGGACATGTTGGTGTCTA 59.372 52.381 0.00 0.00 46.02 2.59
228 229 2.239654 CTGGGGACATGTTGGTGTCTAT 59.760 50.000 0.00 0.00 46.02 1.98
229 230 2.026356 TGGGGACATGTTGGTGTCTATG 60.026 50.000 0.00 0.00 46.02 2.23
230 231 2.026262 GGGGACATGTTGGTGTCTATGT 60.026 50.000 0.00 0.00 46.02 2.29
231 232 3.199071 GGGGACATGTTGGTGTCTATGTA 59.801 47.826 0.00 0.00 46.02 2.29
232 233 4.141482 GGGGACATGTTGGTGTCTATGTAT 60.141 45.833 0.00 0.00 46.02 2.29
233 234 5.437060 GGGACATGTTGGTGTCTATGTATT 58.563 41.667 0.00 0.00 46.02 1.89
234 235 5.527582 GGGACATGTTGGTGTCTATGTATTC 59.472 44.000 0.00 0.00 46.02 1.75
235 236 6.112734 GGACATGTTGGTGTCTATGTATTCA 58.887 40.000 0.00 0.00 46.02 2.57
236 237 6.037172 GGACATGTTGGTGTCTATGTATTCAC 59.963 42.308 0.00 0.00 46.02 3.18
237 238 6.472016 ACATGTTGGTGTCTATGTATTCACA 58.528 36.000 0.00 0.00 39.52 3.58
238 239 6.371548 ACATGTTGGTGTCTATGTATTCACAC 59.628 38.462 0.00 0.00 37.54 3.82
239 240 5.859495 TGTTGGTGTCTATGTATTCACACA 58.141 37.500 3.66 0.00 40.84 3.72
240 241 6.472016 TGTTGGTGTCTATGTATTCACACAT 58.528 36.000 3.66 0.00 40.84 3.21
241 242 6.371271 TGTTGGTGTCTATGTATTCACACATG 59.629 38.462 3.66 0.00 40.84 3.21
242 243 6.048732 TGGTGTCTATGTATTCACACATGT 57.951 37.500 0.00 0.00 40.84 3.21
243 244 7.176589 TGGTGTCTATGTATTCACACATGTA 57.823 36.000 0.00 0.00 40.84 2.29
244 245 7.791029 TGGTGTCTATGTATTCACACATGTAT 58.209 34.615 0.00 0.00 40.84 2.29
245 246 8.264347 TGGTGTCTATGTATTCACACATGTATT 58.736 33.333 0.00 0.00 40.84 1.89
246 247 9.758651 GGTGTCTATGTATTCACACATGTATTA 57.241 33.333 0.00 0.00 40.84 0.98
255 256 9.811655 GTATTCACACATGTATTATGATTTCCG 57.188 33.333 0.00 0.00 0.00 4.30
256 257 6.859420 TCACACATGTATTATGATTTCCGG 57.141 37.500 0.00 0.00 0.00 5.14
257 258 6.587273 TCACACATGTATTATGATTTCCGGA 58.413 36.000 0.00 0.00 0.00 5.14
258 259 7.223584 TCACACATGTATTATGATTTCCGGAT 58.776 34.615 4.15 0.00 0.00 4.18
259 260 8.371699 TCACACATGTATTATGATTTCCGGATA 58.628 33.333 4.15 0.00 0.00 2.59
260 261 8.998377 CACACATGTATTATGATTTCCGGATAA 58.002 33.333 4.15 0.00 0.00 1.75
261 262 8.999431 ACACATGTATTATGATTTCCGGATAAC 58.001 33.333 4.15 0.00 0.00 1.89
262 263 8.998377 CACATGTATTATGATTTCCGGATAACA 58.002 33.333 4.15 6.08 0.00 2.41
263 264 8.999431 ACATGTATTATGATTTCCGGATAACAC 58.001 33.333 4.15 0.00 0.00 3.32
264 265 8.998377 CATGTATTATGATTTCCGGATAACACA 58.002 33.333 4.15 6.66 0.00 3.72
265 266 8.966069 TGTATTATGATTTCCGGATAACACAA 57.034 30.769 4.15 0.85 0.00 3.33
266 267 9.567776 TGTATTATGATTTCCGGATAACACAAT 57.432 29.630 4.15 9.44 0.00 2.71
272 273 8.094798 TGATTTCCGGATAACACAATTATAGC 57.905 34.615 4.15 0.00 0.00 2.97
273 274 7.717436 TGATTTCCGGATAACACAATTATAGCA 59.283 33.333 4.15 0.00 0.00 3.49
274 275 8.635765 ATTTCCGGATAACACAATTATAGCAT 57.364 30.769 4.15 0.00 0.00 3.79
275 276 7.433708 TTCCGGATAACACAATTATAGCATG 57.566 36.000 4.15 0.00 0.00 4.06
276 277 6.764379 TCCGGATAACACAATTATAGCATGA 58.236 36.000 0.00 0.00 0.00 3.07
277 278 7.220740 TCCGGATAACACAATTATAGCATGAA 58.779 34.615 0.00 0.00 0.00 2.57
278 279 7.882791 TCCGGATAACACAATTATAGCATGAAT 59.117 33.333 0.00 0.00 0.00 2.57
279 280 9.161629 CCGGATAACACAATTATAGCATGAATA 57.838 33.333 0.00 0.00 0.00 1.75
339 340 9.981460 ATAATCCTTTTATTATTGCCTCTAGGG 57.019 33.333 0.00 0.00 29.60 3.53
352 353 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
353 354 4.137543 CCTCTAGGGCATATTTCCAACAC 58.862 47.826 0.00 0.00 0.00 3.32
354 355 4.137543 CTCTAGGGCATATTTCCAACACC 58.862 47.826 0.00 0.00 0.00 4.16
355 356 2.917713 AGGGCATATTTCCAACACCA 57.082 45.000 0.00 0.00 0.00 4.17
356 357 3.403228 AGGGCATATTTCCAACACCAT 57.597 42.857 0.00 0.00 0.00 3.55
357 358 3.299503 AGGGCATATTTCCAACACCATC 58.700 45.455 0.00 0.00 0.00 3.51
358 359 3.052642 AGGGCATATTTCCAACACCATCT 60.053 43.478 0.00 0.00 0.00 2.90
359 360 3.068590 GGGCATATTTCCAACACCATCTG 59.931 47.826 0.00 0.00 0.00 2.90
360 361 3.491447 GGCATATTTCCAACACCATCTGC 60.491 47.826 0.00 0.00 0.00 4.26
361 362 3.491447 GCATATTTCCAACACCATCTGCC 60.491 47.826 0.00 0.00 0.00 4.85
362 363 1.560505 ATTTCCAACACCATCTGCCC 58.439 50.000 0.00 0.00 0.00 5.36
363 364 0.187117 TTTCCAACACCATCTGCCCA 59.813 50.000 0.00 0.00 0.00 5.36
364 365 0.187117 TTCCAACACCATCTGCCCAA 59.813 50.000 0.00 0.00 0.00 4.12
365 366 0.539438 TCCAACACCATCTGCCCAAC 60.539 55.000 0.00 0.00 0.00 3.77
366 367 1.535204 CCAACACCATCTGCCCAACC 61.535 60.000 0.00 0.00 0.00 3.77
367 368 1.603455 AACACCATCTGCCCAACCG 60.603 57.895 0.00 0.00 0.00 4.44
368 369 3.443045 CACCATCTGCCCAACCGC 61.443 66.667 0.00 0.00 0.00 5.68
369 370 3.965258 ACCATCTGCCCAACCGCA 61.965 61.111 0.00 0.00 37.19 5.69
370 371 2.676121 CCATCTGCCCAACCGCAA 60.676 61.111 0.00 0.00 38.56 4.85
371 372 2.053865 CCATCTGCCCAACCGCAAT 61.054 57.895 0.00 0.00 38.56 3.56
372 373 1.434696 CATCTGCCCAACCGCAATC 59.565 57.895 0.00 0.00 38.56 2.67
373 374 1.001020 ATCTGCCCAACCGCAATCA 60.001 52.632 0.00 0.00 38.56 2.57
374 375 0.611618 ATCTGCCCAACCGCAATCAA 60.612 50.000 0.00 0.00 38.56 2.57
375 376 1.080569 CTGCCCAACCGCAATCAAC 60.081 57.895 0.00 0.00 38.56 3.18
376 377 1.804396 CTGCCCAACCGCAATCAACA 61.804 55.000 0.00 0.00 38.56 3.33
377 378 1.372872 GCCCAACCGCAATCAACAC 60.373 57.895 0.00 0.00 0.00 3.32
378 379 1.288752 CCCAACCGCAATCAACACC 59.711 57.895 0.00 0.00 0.00 4.16
416 417 4.684703 ACTCGAGAAAACGTTATTGACCAG 59.315 41.667 21.68 0.00 34.70 4.00
417 418 4.873817 TCGAGAAAACGTTATTGACCAGA 58.126 39.130 0.00 0.00 34.70 3.86
418 419 5.475719 TCGAGAAAACGTTATTGACCAGAT 58.524 37.500 0.00 0.00 34.70 2.90
419 420 5.575606 TCGAGAAAACGTTATTGACCAGATC 59.424 40.000 0.00 0.00 34.70 2.75
420 421 5.347635 CGAGAAAACGTTATTGACCAGATCA 59.652 40.000 0.00 0.00 34.65 2.92
421 422 8.214405 TCGAGAAAACGTTATTGACCAGATCAA 61.214 37.037 0.00 0.00 41.62 2.57
429 430 2.385013 TGACCAGATCAACACCATCG 57.615 50.000 0.00 0.00 33.02 3.84
430 431 1.009829 GACCAGATCAACACCATCGC 58.990 55.000 0.00 0.00 0.00 4.58
431 432 0.392998 ACCAGATCAACACCATCGCC 60.393 55.000 0.00 0.00 0.00 5.54
432 433 0.392863 CCAGATCAACACCATCGCCA 60.393 55.000 0.00 0.00 0.00 5.69
433 434 0.729116 CAGATCAACACCATCGCCAC 59.271 55.000 0.00 0.00 0.00 5.01
434 435 0.392998 AGATCAACACCATCGCCACC 60.393 55.000 0.00 0.00 0.00 4.61
435 436 0.676466 GATCAACACCATCGCCACCA 60.676 55.000 0.00 0.00 0.00 4.17
436 437 0.251121 ATCAACACCATCGCCACCAA 60.251 50.000 0.00 0.00 0.00 3.67
437 438 1.169661 TCAACACCATCGCCACCAAC 61.170 55.000 0.00 0.00 0.00 3.77
438 439 1.901464 AACACCATCGCCACCAACC 60.901 57.895 0.00 0.00 0.00 3.77
439 440 2.034066 CACCATCGCCACCAACCT 59.966 61.111 0.00 0.00 0.00 3.50
440 441 1.298340 CACCATCGCCACCAACCTA 59.702 57.895 0.00 0.00 0.00 3.08
441 442 1.024579 CACCATCGCCACCAACCTAC 61.025 60.000 0.00 0.00 0.00 3.18
442 443 1.198759 ACCATCGCCACCAACCTACT 61.199 55.000 0.00 0.00 0.00 2.57
443 444 0.828022 CCATCGCCACCAACCTACTA 59.172 55.000 0.00 0.00 0.00 1.82
444 445 1.208535 CCATCGCCACCAACCTACTAA 59.791 52.381 0.00 0.00 0.00 2.24
445 446 2.355310 CCATCGCCACCAACCTACTAAA 60.355 50.000 0.00 0.00 0.00 1.85
446 447 3.340034 CATCGCCACCAACCTACTAAAA 58.660 45.455 0.00 0.00 0.00 1.52
447 448 3.048337 TCGCCACCAACCTACTAAAAG 57.952 47.619 0.00 0.00 0.00 2.27
448 449 1.467342 CGCCACCAACCTACTAAAAGC 59.533 52.381 0.00 0.00 0.00 3.51
449 450 1.816835 GCCACCAACCTACTAAAAGCC 59.183 52.381 0.00 0.00 0.00 4.35
450 451 2.816337 GCCACCAACCTACTAAAAGCCA 60.816 50.000 0.00 0.00 0.00 4.75
451 452 2.817844 CCACCAACCTACTAAAAGCCAC 59.182 50.000 0.00 0.00 0.00 5.01
452 453 3.482436 CACCAACCTACTAAAAGCCACA 58.518 45.455 0.00 0.00 0.00 4.17
453 454 3.886505 CACCAACCTACTAAAAGCCACAA 59.113 43.478 0.00 0.00 0.00 3.33
454 455 4.023193 CACCAACCTACTAAAAGCCACAAG 60.023 45.833 0.00 0.00 0.00 3.16
455 456 3.057526 CCAACCTACTAAAAGCCACAAGC 60.058 47.826 0.00 0.00 44.25 4.01
524 841 0.886563 ACGACCTACAAACGGAGGAG 59.113 55.000 0.00 0.00 36.61 3.69
525 842 0.172803 CGACCTACAAACGGAGGAGG 59.827 60.000 0.00 1.18 36.61 4.30
526 843 0.535797 GACCTACAAACGGAGGAGGG 59.464 60.000 0.00 0.00 36.61 4.30
730 1048 4.047929 GACTCCATGTCGATCGAGAGAGA 61.048 52.174 28.57 21.47 38.78 3.10
954 1274 3.387947 CGCCAGGTTACCTCCGGT 61.388 66.667 0.00 0.00 40.16 5.28
955 1275 2.582978 GCCAGGTTACCTCCGGTC 59.417 66.667 0.00 0.00 37.09 4.79
972 1301 3.322466 CTGGCCAGTTCCTCCCGT 61.322 66.667 25.53 0.00 0.00 5.28
1212 1547 3.687102 CACGTGGACCCGGCAGTA 61.687 66.667 7.95 0.00 0.00 2.74
1392 1727 3.717842 CTACTCGGAGGAGGAGGAG 57.282 63.158 9.53 0.00 45.99 3.69
1455 1790 4.116238 AGCGCTAGTTCATTAAGCTTCTC 58.884 43.478 8.99 0.00 34.03 2.87
1474 1809 4.938080 TCTCCAAAGCTATGAACTCGATC 58.062 43.478 0.00 0.00 0.00 3.69
1478 1813 3.802948 AAGCTATGAACTCGATCCGTT 57.197 42.857 0.00 0.00 0.00 4.44
1480 1815 4.913335 AGCTATGAACTCGATCCGTTTA 57.087 40.909 0.00 0.00 0.00 2.01
1481 1816 4.608951 AGCTATGAACTCGATCCGTTTAC 58.391 43.478 0.00 0.00 0.00 2.01
1482 1817 3.734735 GCTATGAACTCGATCCGTTTACC 59.265 47.826 0.00 0.00 0.00 2.85
1492 1827 2.218953 TCCGTTTACCAGCGATGATC 57.781 50.000 0.06 0.00 0.00 2.92
1515 1850 1.119497 CATCGTATTACGCACGTACGC 59.881 52.381 16.72 0.00 42.21 4.42
1540 1875 5.786264 ACACCATAGCATGTACTACTACC 57.214 43.478 0.00 0.00 0.00 3.18
1559 1894 2.033801 ACCCCGTGTAGTAATTCGATCG 59.966 50.000 9.36 9.36 0.00 3.69
1573 1908 1.929169 TCGATCGTCCACTAGTACGTG 59.071 52.381 15.94 8.91 39.99 4.49
1619 1954 5.292671 GATGCATGATCCACATATGTGTC 57.707 43.478 29.25 22.32 44.21 3.67
1620 1955 4.426736 TGCATGATCCACATATGTGTCT 57.573 40.909 29.25 18.31 44.21 3.41
1621 1956 4.784177 TGCATGATCCACATATGTGTCTT 58.216 39.130 29.25 18.10 44.21 3.01
1622 1957 5.195185 TGCATGATCCACATATGTGTCTTT 58.805 37.500 29.25 14.02 44.21 2.52
1623 1958 5.066764 TGCATGATCCACATATGTGTCTTTG 59.933 40.000 29.25 21.76 44.21 2.77
1624 1959 5.297527 GCATGATCCACATATGTGTCTTTGA 59.702 40.000 29.25 20.52 44.21 2.69
1625 1960 6.722301 CATGATCCACATATGTGTCTTTGAC 58.278 40.000 29.25 15.52 44.21 3.18
1626 1961 6.053632 TGATCCACATATGTGTCTTTGACT 57.946 37.500 29.25 12.11 44.21 3.41
1627 1962 6.108687 TGATCCACATATGTGTCTTTGACTC 58.891 40.000 29.25 18.04 44.21 3.36
1671 2009 1.835483 GATGCAGGTTCATAGCGCGG 61.835 60.000 8.83 0.00 0.00 6.46
1753 2094 6.956202 ATCTGATGATGGAGGAAACATTTC 57.044 37.500 0.00 0.00 36.46 2.17
1758 2099 8.284945 TGATGATGGAGGAAACATTTCTTTAG 57.715 34.615 4.45 0.00 37.35 1.85
1763 2104 7.272037 TGGAGGAAACATTTCTTTAGAACAC 57.728 36.000 4.45 0.00 37.35 3.32
1769 2110 7.432252 GGAAACATTTCTTTAGAACACACACAG 59.568 37.037 4.45 0.00 37.35 3.66
1774 2115 5.545063 TCTTTAGAACACACACAGGATGA 57.455 39.130 0.00 0.00 39.69 2.92
1789 2135 0.598065 GATGAACACTTGGGTGGTGC 59.402 55.000 1.29 0.00 44.30 5.01
1790 2136 0.185901 ATGAACACTTGGGTGGTGCT 59.814 50.000 1.29 0.00 44.30 4.40
1793 2139 1.812571 GAACACTTGGGTGGTGCTATG 59.187 52.381 1.29 0.00 44.30 2.23
1795 2141 1.144913 ACACTTGGGTGGTGCTATGTT 59.855 47.619 1.29 0.00 46.85 2.71
1796 2142 2.373836 ACACTTGGGTGGTGCTATGTTA 59.626 45.455 1.29 0.00 46.85 2.41
1799 2145 0.250793 TGGGTGGTGCTATGTTACCG 59.749 55.000 0.00 0.00 39.87 4.02
1800 2146 0.463116 GGGTGGTGCTATGTTACCGG 60.463 60.000 0.00 0.00 39.87 5.28
1801 2147 1.093496 GGTGGTGCTATGTTACCGGC 61.093 60.000 0.00 0.00 39.87 6.13
1802 2148 1.093496 GTGGTGCTATGTTACCGGCC 61.093 60.000 0.00 0.00 39.87 6.13
1822 2168 0.742281 GCAGATTCTCTTGCGAGCCA 60.742 55.000 0.00 0.00 37.19 4.75
1823 2169 1.730501 CAGATTCTCTTGCGAGCCAA 58.269 50.000 0.00 0.00 37.19 4.52
1849 2230 2.202756 GGCTCGCGACGGATTTCT 60.203 61.111 3.71 0.00 0.00 2.52
1858 2239 1.799181 CGACGGATTTCTGAGCACGAT 60.799 52.381 0.00 0.00 0.00 3.73
1859 2240 1.855360 GACGGATTTCTGAGCACGATC 59.145 52.381 0.00 0.00 0.00 3.69
1860 2241 0.848942 CGGATTTCTGAGCACGATCG 59.151 55.000 14.88 14.88 0.00 3.69
1861 2242 1.533965 CGGATTTCTGAGCACGATCGA 60.534 52.381 24.34 0.00 0.00 3.59
1862 2243 1.855360 GGATTTCTGAGCACGATCGAC 59.145 52.381 24.34 13.43 0.00 4.20
1863 2244 2.480416 GGATTTCTGAGCACGATCGACT 60.480 50.000 24.34 18.26 0.00 4.18
1864 2245 2.264109 TTTCTGAGCACGATCGACTC 57.736 50.000 24.34 25.17 0.00 3.36
1896 2279 4.351938 TTCGACCGGACGTGGCAG 62.352 66.667 24.75 0.00 34.70 4.85
1911 2294 2.423898 GCAGCTACCCTGAGGCGTA 61.424 63.158 0.00 0.00 44.64 4.42
1934 2317 4.402192 CGTAGCTGGTCATCGGTG 57.598 61.111 0.00 0.00 0.00 4.94
1935 2318 1.878522 CGTAGCTGGTCATCGGTGC 60.879 63.158 0.00 0.00 0.00 5.01
1936 2319 1.517832 GTAGCTGGTCATCGGTGCT 59.482 57.895 0.00 0.00 37.72 4.40
1942 2325 1.741770 GGTCATCGGTGCTGTGGAC 60.742 63.158 0.00 0.00 0.00 4.02
1950 2333 1.069090 GTGCTGTGGACGGTCTCAA 59.931 57.895 8.23 0.00 0.00 3.02
1963 2346 4.578871 ACGGTCTCAATGTCAATGATCAA 58.421 39.130 0.00 0.00 0.00 2.57
2031 2423 4.659172 CAGCCGGAGCACCCCAAA 62.659 66.667 5.05 0.00 43.56 3.28
2042 2434 2.216331 ACCCCAAATGCCAAGGTGC 61.216 57.895 0.00 0.00 0.00 5.01
2127 2551 3.302344 CGGGGGCAACTTGTTGGG 61.302 66.667 14.30 0.00 0.00 4.12
2154 2579 1.300266 TGTCGTCGAGGCGTGTATCA 61.300 55.000 0.00 0.00 0.00 2.15
2181 2606 0.769873 ATTGGATCAGCTGCCTAGGG 59.230 55.000 11.72 0.00 0.00 3.53
2230 2662 2.535984 CAGGCGATGTACTTAAAGCGAG 59.464 50.000 0.00 0.00 0.00 5.03
2237 2669 4.959596 TGTACTTAAAGCGAGACGAGAT 57.040 40.909 0.00 0.00 0.00 2.75
2275 2710 3.749064 GACGAGGTCGCTGCCTGA 61.749 66.667 0.00 0.00 44.43 3.86
2276 2711 3.069980 GACGAGGTCGCTGCCTGAT 62.070 63.158 0.00 0.00 44.43 2.90
2290 2725 3.216800 TGCCTGATTGCCTGAATATGTC 58.783 45.455 0.00 0.00 0.00 3.06
2297 2732 2.923121 TGCCTGAATATGTCAAGCCTC 58.077 47.619 6.22 0.00 42.23 4.70
2298 2733 2.239402 TGCCTGAATATGTCAAGCCTCA 59.761 45.455 6.22 0.00 42.23 3.86
2299 2734 3.282021 GCCTGAATATGTCAAGCCTCAA 58.718 45.455 0.00 0.00 37.68 3.02
2300 2735 3.314635 GCCTGAATATGTCAAGCCTCAAG 59.685 47.826 0.00 0.00 37.68 3.02
2301 2736 3.314635 CCTGAATATGTCAAGCCTCAAGC 59.685 47.826 0.00 0.00 35.22 4.01
2303 2738 3.054139 TGAATATGTCAAGCCTCAAGCCT 60.054 43.478 0.00 0.00 45.47 4.58
2304 2739 2.408271 TATGTCAAGCCTCAAGCCTG 57.592 50.000 0.00 0.00 45.47 4.85
2305 2740 0.964358 ATGTCAAGCCTCAAGCCTGC 60.964 55.000 0.00 0.00 45.47 4.85
2306 2741 2.034687 TCAAGCCTCAAGCCTGCC 59.965 61.111 0.00 0.00 45.47 4.85
2307 2742 3.066814 CAAGCCTCAAGCCTGCCC 61.067 66.667 0.00 0.00 45.47 5.36
2372 2807 4.508128 TCGTCGCCATCCCTTCGC 62.508 66.667 0.00 0.00 0.00 4.70
2414 2854 6.294899 CGGCTATATACAGCTTACTTACCCAA 60.295 42.308 2.48 0.00 41.50 4.12
2423 2863 3.008266 GCTTACTTACCCAACACCTACCA 59.992 47.826 0.00 0.00 0.00 3.25
2435 2875 1.004560 CCTACCATGCGATGCCGAT 60.005 57.895 0.00 0.00 38.22 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.605995 TCTTTTCCTTAGACCATGAGATCGTA 59.394 38.462 0.00 0.00 0.00 3.43
1 2 5.422331 TCTTTTCCTTAGACCATGAGATCGT 59.578 40.000 0.00 0.00 0.00 3.73
2 3 5.907207 TCTTTTCCTTAGACCATGAGATCG 58.093 41.667 0.00 0.00 0.00 3.69
3 4 8.646900 AGTATCTTTTCCTTAGACCATGAGATC 58.353 37.037 0.00 0.00 0.00 2.75
4 5 8.560124 AGTATCTTTTCCTTAGACCATGAGAT 57.440 34.615 0.00 0.00 0.00 2.75
5 6 7.979786 AGTATCTTTTCCTTAGACCATGAGA 57.020 36.000 0.00 0.00 0.00 3.27
6 7 8.260818 TCAAGTATCTTTTCCTTAGACCATGAG 58.739 37.037 0.00 0.00 0.00 2.90
7 8 8.041323 GTCAAGTATCTTTTCCTTAGACCATGA 58.959 37.037 0.00 0.00 0.00 3.07
8 9 7.824289 TGTCAAGTATCTTTTCCTTAGACCATG 59.176 37.037 0.00 0.00 0.00 3.66
9 10 7.918076 TGTCAAGTATCTTTTCCTTAGACCAT 58.082 34.615 0.00 0.00 0.00 3.55
10 11 7.311092 TGTCAAGTATCTTTTCCTTAGACCA 57.689 36.000 0.00 0.00 0.00 4.02
11 12 8.669243 CAATGTCAAGTATCTTTTCCTTAGACC 58.331 37.037 0.00 0.00 0.00 3.85
12 13 8.669243 CCAATGTCAAGTATCTTTTCCTTAGAC 58.331 37.037 0.00 0.00 0.00 2.59
13 14 8.602424 TCCAATGTCAAGTATCTTTTCCTTAGA 58.398 33.333 0.00 0.00 0.00 2.10
14 15 8.792830 TCCAATGTCAAGTATCTTTTCCTTAG 57.207 34.615 0.00 0.00 0.00 2.18
15 16 9.581289 TTTCCAATGTCAAGTATCTTTTCCTTA 57.419 29.630 0.00 0.00 0.00 2.69
16 17 8.477419 TTTCCAATGTCAAGTATCTTTTCCTT 57.523 30.769 0.00 0.00 0.00 3.36
17 18 8.477419 TTTTCCAATGTCAAGTATCTTTTCCT 57.523 30.769 0.00 0.00 0.00 3.36
18 19 8.978539 GTTTTTCCAATGTCAAGTATCTTTTCC 58.021 33.333 0.00 0.00 0.00 3.13
19 20 9.750125 AGTTTTTCCAATGTCAAGTATCTTTTC 57.250 29.630 0.00 0.00 0.00 2.29
20 21 9.750125 GAGTTTTTCCAATGTCAAGTATCTTTT 57.250 29.630 0.00 0.00 0.00 2.27
21 22 9.136323 AGAGTTTTTCCAATGTCAAGTATCTTT 57.864 29.630 0.00 0.00 0.00 2.52
22 23 8.697507 AGAGTTTTTCCAATGTCAAGTATCTT 57.302 30.769 0.00 0.00 0.00 2.40
23 24 9.442047 CTAGAGTTTTTCCAATGTCAAGTATCT 57.558 33.333 0.00 0.00 0.00 1.98
24 25 8.178313 GCTAGAGTTTTTCCAATGTCAAGTATC 58.822 37.037 0.00 0.00 0.00 2.24
25 26 7.665559 TGCTAGAGTTTTTCCAATGTCAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
26 27 6.995686 TGCTAGAGTTTTTCCAATGTCAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
27 28 5.827797 TGCTAGAGTTTTTCCAATGTCAAGT 59.172 36.000 0.00 0.00 0.00 3.16
28 29 6.317789 TGCTAGAGTTTTTCCAATGTCAAG 57.682 37.500 0.00 0.00 0.00 3.02
29 30 6.707440 TTGCTAGAGTTTTTCCAATGTCAA 57.293 33.333 0.00 0.00 0.00 3.18
30 31 6.503524 GTTTGCTAGAGTTTTTCCAATGTCA 58.496 36.000 0.00 0.00 0.00 3.58
31 32 5.625311 CGTTTGCTAGAGTTTTTCCAATGTC 59.375 40.000 0.00 0.00 0.00 3.06
32 33 5.298276 TCGTTTGCTAGAGTTTTTCCAATGT 59.702 36.000 0.00 0.00 0.00 2.71
33 34 5.757886 TCGTTTGCTAGAGTTTTTCCAATG 58.242 37.500 0.00 0.00 0.00 2.82
34 35 6.039382 AGTTCGTTTGCTAGAGTTTTTCCAAT 59.961 34.615 0.00 0.00 0.00 3.16
35 36 5.355910 AGTTCGTTTGCTAGAGTTTTTCCAA 59.644 36.000 0.00 0.00 0.00 3.53
36 37 4.879545 AGTTCGTTTGCTAGAGTTTTTCCA 59.120 37.500 0.00 0.00 0.00 3.53
37 38 5.419760 AGTTCGTTTGCTAGAGTTTTTCC 57.580 39.130 0.00 0.00 0.00 3.13
38 39 7.891723 CGTATAGTTCGTTTGCTAGAGTTTTTC 59.108 37.037 0.00 0.00 0.00 2.29
39 40 7.596248 TCGTATAGTTCGTTTGCTAGAGTTTTT 59.404 33.333 0.00 0.00 0.00 1.94
40 41 7.086376 TCGTATAGTTCGTTTGCTAGAGTTTT 58.914 34.615 0.00 0.00 0.00 2.43
41 42 6.615088 TCGTATAGTTCGTTTGCTAGAGTTT 58.385 36.000 0.00 0.00 0.00 2.66
42 43 6.187125 TCGTATAGTTCGTTTGCTAGAGTT 57.813 37.500 0.00 0.00 0.00 3.01
43 44 5.808042 TCGTATAGTTCGTTTGCTAGAGT 57.192 39.130 0.00 0.00 0.00 3.24
44 45 6.660722 AGATCGTATAGTTCGTTTGCTAGAG 58.339 40.000 0.00 0.00 0.00 2.43
45 46 6.615264 AGATCGTATAGTTCGTTTGCTAGA 57.385 37.500 0.00 0.00 0.00 2.43
46 47 6.691818 ACAAGATCGTATAGTTCGTTTGCTAG 59.308 38.462 0.00 0.00 0.00 3.42
47 48 6.471198 CACAAGATCGTATAGTTCGTTTGCTA 59.529 38.462 0.00 0.00 0.00 3.49
48 49 5.288712 CACAAGATCGTATAGTTCGTTTGCT 59.711 40.000 0.00 0.00 0.00 3.91
49 50 5.481472 CACAAGATCGTATAGTTCGTTTGC 58.519 41.667 0.00 0.00 0.00 3.68
50 51 5.288712 AGCACAAGATCGTATAGTTCGTTTG 59.711 40.000 0.00 0.00 0.00 2.93
51 52 5.408356 AGCACAAGATCGTATAGTTCGTTT 58.592 37.500 0.00 0.00 0.00 3.60
52 53 4.995124 AGCACAAGATCGTATAGTTCGTT 58.005 39.130 0.00 0.00 0.00 3.85
53 54 4.634184 AGCACAAGATCGTATAGTTCGT 57.366 40.909 0.00 0.00 0.00 3.85
54 55 6.143496 ACATAGCACAAGATCGTATAGTTCG 58.857 40.000 0.00 0.00 0.00 3.95
55 56 7.932120 AACATAGCACAAGATCGTATAGTTC 57.068 36.000 0.00 0.00 0.00 3.01
56 57 9.464714 CTAAACATAGCACAAGATCGTATAGTT 57.535 33.333 0.00 0.00 0.00 2.24
57 58 8.082852 CCTAAACATAGCACAAGATCGTATAGT 58.917 37.037 0.00 0.00 0.00 2.12
58 59 8.297426 TCCTAAACATAGCACAAGATCGTATAG 58.703 37.037 0.00 0.00 0.00 1.31
59 60 8.173542 TCCTAAACATAGCACAAGATCGTATA 57.826 34.615 0.00 0.00 0.00 1.47
60 61 7.050970 TCCTAAACATAGCACAAGATCGTAT 57.949 36.000 0.00 0.00 0.00 3.06
61 62 6.459670 TCCTAAACATAGCACAAGATCGTA 57.540 37.500 0.00 0.00 0.00 3.43
62 63 5.339008 TCCTAAACATAGCACAAGATCGT 57.661 39.130 0.00 0.00 0.00 3.73
63 64 6.293081 CCAATCCTAAACATAGCACAAGATCG 60.293 42.308 0.00 0.00 0.00 3.69
64 65 6.016777 CCCAATCCTAAACATAGCACAAGATC 60.017 42.308 0.00 0.00 0.00 2.75
65 66 5.829924 CCCAATCCTAAACATAGCACAAGAT 59.170 40.000 0.00 0.00 0.00 2.40
66 67 5.192927 CCCAATCCTAAACATAGCACAAGA 58.807 41.667 0.00 0.00 0.00 3.02
67 68 4.949856 ACCCAATCCTAAACATAGCACAAG 59.050 41.667 0.00 0.00 0.00 3.16
68 69 4.929479 ACCCAATCCTAAACATAGCACAA 58.071 39.130 0.00 0.00 0.00 3.33
69 70 4.227300 AGACCCAATCCTAAACATAGCACA 59.773 41.667 0.00 0.00 0.00 4.57
70 71 4.781934 AGACCCAATCCTAAACATAGCAC 58.218 43.478 0.00 0.00 0.00 4.40
71 72 5.192927 CAAGACCCAATCCTAAACATAGCA 58.807 41.667 0.00 0.00 0.00 3.49
72 73 5.193679 ACAAGACCCAATCCTAAACATAGC 58.806 41.667 0.00 0.00 0.00 2.97
73 74 5.823045 GGACAAGACCCAATCCTAAACATAG 59.177 44.000 0.00 0.00 0.00 2.23
74 75 5.251932 TGGACAAGACCCAATCCTAAACATA 59.748 40.000 0.00 0.00 32.06 2.29
75 76 4.044065 TGGACAAGACCCAATCCTAAACAT 59.956 41.667 0.00 0.00 32.06 2.71
76 77 3.396276 TGGACAAGACCCAATCCTAAACA 59.604 43.478 0.00 0.00 32.06 2.83
77 78 4.028993 TGGACAAGACCCAATCCTAAAC 57.971 45.455 0.00 0.00 32.06 2.01
78 79 4.290985 TGATGGACAAGACCCAATCCTAAA 59.709 41.667 0.00 0.00 37.22 1.85
79 80 3.849574 TGATGGACAAGACCCAATCCTAA 59.150 43.478 0.00 0.00 37.22 2.69
80 81 3.199946 GTGATGGACAAGACCCAATCCTA 59.800 47.826 0.00 0.00 37.22 2.94
81 82 2.025887 GTGATGGACAAGACCCAATCCT 60.026 50.000 0.00 0.00 37.22 3.24
82 83 2.290896 TGTGATGGACAAGACCCAATCC 60.291 50.000 0.00 0.00 37.22 3.01
83 84 3.071874 TGTGATGGACAAGACCCAATC 57.928 47.619 0.00 0.00 37.22 2.67
84 85 3.010472 TGATGTGATGGACAAGACCCAAT 59.990 43.478 0.00 0.00 38.36 3.16
85 86 2.374839 TGATGTGATGGACAAGACCCAA 59.625 45.455 0.00 0.00 38.36 4.12
86 87 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
87 88 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
88 89 4.521146 AGAATGATGTGATGGACAAGACC 58.479 43.478 0.00 0.00 38.36 3.85
89 90 4.574013 GGAGAATGATGTGATGGACAAGAC 59.426 45.833 0.00 0.00 38.36 3.01
90 91 4.472470 AGGAGAATGATGTGATGGACAAGA 59.528 41.667 0.00 0.00 38.36 3.02
91 92 4.778579 AGGAGAATGATGTGATGGACAAG 58.221 43.478 0.00 0.00 38.36 3.16
92 93 4.849813 AGGAGAATGATGTGATGGACAA 57.150 40.909 0.00 0.00 38.36 3.18
93 94 5.955961 TTAGGAGAATGATGTGATGGACA 57.044 39.130 0.00 0.00 39.53 4.02
94 95 6.528321 TCATTAGGAGAATGATGTGATGGAC 58.472 40.000 0.00 0.00 32.21 4.02
95 96 6.752285 TCATTAGGAGAATGATGTGATGGA 57.248 37.500 0.00 0.00 32.21 3.41
103 104 7.039152 ACGAGATCACATCATTAGGAGAATGAT 60.039 37.037 6.90 6.90 45.40 2.45
104 105 6.266330 ACGAGATCACATCATTAGGAGAATGA 59.734 38.462 2.66 2.66 40.50 2.57
105 106 6.453943 ACGAGATCACATCATTAGGAGAATG 58.546 40.000 0.00 0.00 0.00 2.67
106 107 6.662865 ACGAGATCACATCATTAGGAGAAT 57.337 37.500 0.00 0.00 0.00 2.40
107 108 6.471233 AACGAGATCACATCATTAGGAGAA 57.529 37.500 0.00 0.00 0.00 2.87
108 109 7.448469 TGATAACGAGATCACATCATTAGGAGA 59.552 37.037 0.00 0.00 30.75 3.71
109 110 7.597386 TGATAACGAGATCACATCATTAGGAG 58.403 38.462 0.00 0.00 30.75 3.69
110 111 7.524717 TGATAACGAGATCACATCATTAGGA 57.475 36.000 0.00 0.00 30.75 2.94
111 112 8.654215 CATTGATAACGAGATCACATCATTAGG 58.346 37.037 0.00 0.00 35.56 2.69
112 113 9.415544 TCATTGATAACGAGATCACATCATTAG 57.584 33.333 0.00 0.00 35.56 1.73
113 114 9.196552 GTCATTGATAACGAGATCACATCATTA 57.803 33.333 0.00 0.00 35.56 1.90
114 115 7.712205 TGTCATTGATAACGAGATCACATCATT 59.288 33.333 0.00 0.00 35.56 2.57
115 116 7.212274 TGTCATTGATAACGAGATCACATCAT 58.788 34.615 0.00 0.00 35.56 2.45
116 117 6.572519 TGTCATTGATAACGAGATCACATCA 58.427 36.000 0.00 0.00 35.56 3.07
117 118 7.148672 GGATGTCATTGATAACGAGATCACATC 60.149 40.741 15.82 15.82 36.17 3.06
118 119 6.648310 GGATGTCATTGATAACGAGATCACAT 59.352 38.462 0.00 4.82 35.56 3.21
119 120 5.985530 GGATGTCATTGATAACGAGATCACA 59.014 40.000 0.00 0.86 35.56 3.58
120 121 5.985530 TGGATGTCATTGATAACGAGATCAC 59.014 40.000 0.00 0.00 35.56 3.06
121 122 6.160576 TGGATGTCATTGATAACGAGATCA 57.839 37.500 0.00 0.00 32.57 2.92
122 123 7.172190 ACATTGGATGTCATTGATAACGAGATC 59.828 37.037 0.00 0.00 39.92 2.75
123 124 6.994496 ACATTGGATGTCATTGATAACGAGAT 59.006 34.615 0.00 0.00 39.92 2.75
124 125 6.348498 ACATTGGATGTCATTGATAACGAGA 58.652 36.000 0.00 0.00 39.92 4.04
125 126 6.609237 ACATTGGATGTCATTGATAACGAG 57.391 37.500 0.00 0.00 39.92 4.18
139 140 6.183360 GGTTTTCTGACTATGGACATTGGATG 60.183 42.308 0.00 0.00 0.00 3.51
140 141 5.888161 GGTTTTCTGACTATGGACATTGGAT 59.112 40.000 0.00 0.00 0.00 3.41
141 142 5.222027 TGGTTTTCTGACTATGGACATTGGA 60.222 40.000 0.00 0.00 0.00 3.53
142 143 5.009631 TGGTTTTCTGACTATGGACATTGG 58.990 41.667 0.00 0.00 0.00 3.16
143 144 6.375174 TCATGGTTTTCTGACTATGGACATTG 59.625 38.462 0.00 0.00 38.56 2.82
144 145 6.375455 GTCATGGTTTTCTGACTATGGACATT 59.625 38.462 0.00 0.00 38.56 2.71
145 146 5.882557 GTCATGGTTTTCTGACTATGGACAT 59.117 40.000 0.00 0.00 38.56 3.06
146 147 5.245531 GTCATGGTTTTCTGACTATGGACA 58.754 41.667 0.00 0.00 38.56 4.02
147 148 5.803020 GTCATGGTTTTCTGACTATGGAC 57.197 43.478 0.00 0.00 38.56 4.02
154 155 6.650807 TCAACAGATAGTCATGGTTTTCTGAC 59.349 38.462 17.72 0.00 41.65 3.51
155 156 6.768483 TCAACAGATAGTCATGGTTTTCTGA 58.232 36.000 17.72 0.77 35.65 3.27
156 157 7.335171 TGATCAACAGATAGTCATGGTTTTCTG 59.665 37.037 12.63 12.63 37.27 3.02
157 158 7.397221 TGATCAACAGATAGTCATGGTTTTCT 58.603 34.615 0.00 0.00 0.00 2.52
158 159 7.615582 TGATCAACAGATAGTCATGGTTTTC 57.384 36.000 0.00 0.00 0.00 2.29
159 160 7.361201 CGTTGATCAACAGATAGTCATGGTTTT 60.361 37.037 32.06 0.00 41.20 2.43
160 161 6.092670 CGTTGATCAACAGATAGTCATGGTTT 59.907 38.462 32.06 0.00 41.20 3.27
161 162 5.582269 CGTTGATCAACAGATAGTCATGGTT 59.418 40.000 32.06 0.00 41.20 3.67
162 163 5.105351 TCGTTGATCAACAGATAGTCATGGT 60.105 40.000 32.06 0.00 41.20 3.55
163 164 5.351458 TCGTTGATCAACAGATAGTCATGG 58.649 41.667 32.06 15.04 41.20 3.66
164 165 5.051173 GCTCGTTGATCAACAGATAGTCATG 60.051 44.000 32.06 18.25 41.20 3.07
165 166 5.046529 GCTCGTTGATCAACAGATAGTCAT 58.953 41.667 32.06 0.00 41.20 3.06
166 167 4.158579 AGCTCGTTGATCAACAGATAGTCA 59.841 41.667 32.06 11.38 41.20 3.41
167 168 4.677584 AGCTCGTTGATCAACAGATAGTC 58.322 43.478 32.06 19.15 41.20 2.59
168 169 4.727507 AGCTCGTTGATCAACAGATAGT 57.272 40.909 32.06 16.47 41.20 2.12
169 170 5.826586 ACTAGCTCGTTGATCAACAGATAG 58.173 41.667 33.05 33.05 40.27 2.08
170 171 5.357032 TGACTAGCTCGTTGATCAACAGATA 59.643 40.000 32.06 26.63 41.20 1.98
171 172 4.158579 TGACTAGCTCGTTGATCAACAGAT 59.841 41.667 32.06 26.87 41.20 2.90
172 173 3.506067 TGACTAGCTCGTTGATCAACAGA 59.494 43.478 32.06 26.81 41.20 3.41
173 174 3.838120 TGACTAGCTCGTTGATCAACAG 58.162 45.455 32.06 26.93 41.20 3.16
174 175 3.934457 TGACTAGCTCGTTGATCAACA 57.066 42.857 32.06 20.24 41.20 3.33
175 176 4.238514 AGTTGACTAGCTCGTTGATCAAC 58.761 43.478 25.68 25.68 43.94 3.18
176 177 4.521130 AGTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
177 178 4.941873 TCTAGTTGACTAGCTCGTTGATCA 59.058 41.667 12.30 0.00 44.24 2.92
178 179 5.487153 TCTAGTTGACTAGCTCGTTGATC 57.513 43.478 12.30 0.00 44.24 2.92
179 180 4.336993 CCTCTAGTTGACTAGCTCGTTGAT 59.663 45.833 12.30 0.00 44.24 2.57
180 181 3.690139 CCTCTAGTTGACTAGCTCGTTGA 59.310 47.826 12.30 0.00 44.24 3.18
181 182 3.732471 GCCTCTAGTTGACTAGCTCGTTG 60.732 52.174 12.30 0.75 44.24 4.10
182 183 2.424246 GCCTCTAGTTGACTAGCTCGTT 59.576 50.000 12.30 0.00 44.24 3.85
183 184 2.018515 GCCTCTAGTTGACTAGCTCGT 58.981 52.381 12.30 0.00 44.24 4.18
184 185 2.294074 AGCCTCTAGTTGACTAGCTCG 58.706 52.381 12.30 0.00 44.24 5.03
185 186 4.885325 AGTAAGCCTCTAGTTGACTAGCTC 59.115 45.833 12.30 5.16 44.24 4.09
186 187 4.642885 CAGTAAGCCTCTAGTTGACTAGCT 59.357 45.833 12.30 5.64 44.24 3.32
187 188 4.202070 CCAGTAAGCCTCTAGTTGACTAGC 60.202 50.000 12.30 3.61 44.24 3.42
188 189 4.339814 CCCAGTAAGCCTCTAGTTGACTAG 59.660 50.000 11.14 11.14 45.57 2.57
189 190 4.279145 CCCAGTAAGCCTCTAGTTGACTA 58.721 47.826 0.00 0.00 0.00 2.59
190 191 3.100671 CCCAGTAAGCCTCTAGTTGACT 58.899 50.000 0.00 0.00 0.00 3.41
191 192 2.168728 CCCCAGTAAGCCTCTAGTTGAC 59.831 54.545 0.00 0.00 0.00 3.18
192 193 2.043939 TCCCCAGTAAGCCTCTAGTTGA 59.956 50.000 0.00 0.00 0.00 3.18
193 194 2.168728 GTCCCCAGTAAGCCTCTAGTTG 59.831 54.545 0.00 0.00 0.00 3.16
194 195 2.225547 TGTCCCCAGTAAGCCTCTAGTT 60.226 50.000 0.00 0.00 0.00 2.24
195 196 1.361543 TGTCCCCAGTAAGCCTCTAGT 59.638 52.381 0.00 0.00 0.00 2.57
196 197 2.160721 TGTCCCCAGTAAGCCTCTAG 57.839 55.000 0.00 0.00 0.00 2.43
197 198 2.292918 ACATGTCCCCAGTAAGCCTCTA 60.293 50.000 0.00 0.00 0.00 2.43
198 199 1.207791 CATGTCCCCAGTAAGCCTCT 58.792 55.000 0.00 0.00 0.00 3.69
199 200 0.912486 ACATGTCCCCAGTAAGCCTC 59.088 55.000 0.00 0.00 0.00 4.70
200 201 1.004745 CAACATGTCCCCAGTAAGCCT 59.995 52.381 0.00 0.00 0.00 4.58
201 202 1.463674 CAACATGTCCCCAGTAAGCC 58.536 55.000 0.00 0.00 0.00 4.35
202 203 1.271926 ACCAACATGTCCCCAGTAAGC 60.272 52.381 0.00 0.00 0.00 3.09
203 204 2.224769 ACACCAACATGTCCCCAGTAAG 60.225 50.000 0.00 0.00 0.00 2.34
204 205 1.777878 ACACCAACATGTCCCCAGTAA 59.222 47.619 0.00 0.00 0.00 2.24
205 206 1.349688 GACACCAACATGTCCCCAGTA 59.650 52.381 0.00 0.00 42.74 2.74
206 207 0.110486 GACACCAACATGTCCCCAGT 59.890 55.000 0.00 0.00 42.74 4.00
207 208 2.946947 GACACCAACATGTCCCCAG 58.053 57.895 0.00 0.00 42.74 4.45
212 213 7.413000 GTGTGAATACATAGACACCAACATGTC 60.413 40.741 0.00 0.00 42.99 3.06
213 214 6.371548 GTGTGAATACATAGACACCAACATGT 59.628 38.462 0.00 0.00 39.39 3.21
214 215 6.371271 TGTGTGAATACATAGACACCAACATG 59.629 38.462 0.00 0.00 39.39 3.21
215 216 6.472016 TGTGTGAATACATAGACACCAACAT 58.528 36.000 0.00 0.00 39.39 2.71
216 217 5.859495 TGTGTGAATACATAGACACCAACA 58.141 37.500 0.00 0.00 39.39 3.33
217 218 6.371548 ACATGTGTGAATACATAGACACCAAC 59.628 38.462 0.00 0.00 39.17 3.77
218 219 6.472016 ACATGTGTGAATACATAGACACCAA 58.528 36.000 0.00 0.00 39.17 3.67
219 220 6.048732 ACATGTGTGAATACATAGACACCA 57.951 37.500 0.00 0.00 39.17 4.17
220 221 8.662781 AATACATGTGTGAATACATAGACACC 57.337 34.615 9.11 0.00 39.17 4.16
229 230 9.811655 CGGAAATCATAATACATGTGTGAATAC 57.188 33.333 9.11 2.18 0.00 1.89
230 231 8.998377 CCGGAAATCATAATACATGTGTGAATA 58.002 33.333 9.11 0.00 0.00 1.75
231 232 7.719193 TCCGGAAATCATAATACATGTGTGAAT 59.281 33.333 9.11 0.00 0.00 2.57
232 233 7.051000 TCCGGAAATCATAATACATGTGTGAA 58.949 34.615 9.11 0.00 0.00 3.18
233 234 6.587273 TCCGGAAATCATAATACATGTGTGA 58.413 36.000 9.11 7.95 0.00 3.58
234 235 6.859420 TCCGGAAATCATAATACATGTGTG 57.141 37.500 9.11 2.44 0.00 3.82
235 236 8.999431 GTTATCCGGAAATCATAATACATGTGT 58.001 33.333 9.01 0.00 0.00 3.72
236 237 8.998377 TGTTATCCGGAAATCATAATACATGTG 58.002 33.333 9.01 0.00 0.00 3.21
237 238 8.999431 GTGTTATCCGGAAATCATAATACATGT 58.001 33.333 9.01 2.69 29.29 3.21
238 239 8.998377 TGTGTTATCCGGAAATCATAATACATG 58.002 33.333 9.01 0.00 32.40 3.21
239 240 9.567776 TTGTGTTATCCGGAAATCATAATACAT 57.432 29.630 18.96 0.00 35.39 2.29
240 241 8.966069 TTGTGTTATCCGGAAATCATAATACA 57.034 30.769 9.01 13.79 34.30 2.29
246 247 8.730680 GCTATAATTGTGTTATCCGGAAATCAT 58.269 33.333 9.01 0.00 0.00 2.45
247 248 7.717436 TGCTATAATTGTGTTATCCGGAAATCA 59.283 33.333 9.01 4.85 0.00 2.57
248 249 8.094798 TGCTATAATTGTGTTATCCGGAAATC 57.905 34.615 9.01 1.80 0.00 2.17
249 250 8.514594 CATGCTATAATTGTGTTATCCGGAAAT 58.485 33.333 9.01 0.00 0.00 2.17
250 251 7.717436 TCATGCTATAATTGTGTTATCCGGAAA 59.283 33.333 9.01 0.99 0.00 3.13
251 252 7.220740 TCATGCTATAATTGTGTTATCCGGAA 58.779 34.615 9.01 0.00 0.00 4.30
252 253 6.764379 TCATGCTATAATTGTGTTATCCGGA 58.236 36.000 6.61 6.61 0.00 5.14
253 254 7.433708 TTCATGCTATAATTGTGTTATCCGG 57.566 36.000 0.00 0.00 0.00 5.14
313 314 9.981460 CCCTAGAGGCAATAATAAAAGGATTAT 57.019 33.333 0.00 0.00 34.18 1.28
331 332 4.137543 GTGTTGGAAATATGCCCTAGAGG 58.862 47.826 0.00 0.00 39.47 3.69
332 333 4.137543 GGTGTTGGAAATATGCCCTAGAG 58.862 47.826 0.00 0.00 0.00 2.43
333 334 3.525609 TGGTGTTGGAAATATGCCCTAGA 59.474 43.478 0.00 0.00 0.00 2.43
334 335 3.897239 TGGTGTTGGAAATATGCCCTAG 58.103 45.455 0.00 0.00 0.00 3.02
335 336 4.167892 AGATGGTGTTGGAAATATGCCCTA 59.832 41.667 0.00 0.00 0.00 3.53
336 337 2.917713 TGGTGTTGGAAATATGCCCT 57.082 45.000 0.00 0.00 0.00 5.19
337 338 3.068590 CAGATGGTGTTGGAAATATGCCC 59.931 47.826 0.00 0.00 0.00 5.36
338 339 3.491447 GCAGATGGTGTTGGAAATATGCC 60.491 47.826 0.00 0.00 32.48 4.40
339 340 3.491447 GGCAGATGGTGTTGGAAATATGC 60.491 47.826 0.00 0.00 36.71 3.14
340 341 3.068590 GGGCAGATGGTGTTGGAAATATG 59.931 47.826 0.00 0.00 0.00 1.78
341 342 3.299503 GGGCAGATGGTGTTGGAAATAT 58.700 45.455 0.00 0.00 0.00 1.28
342 343 2.042297 TGGGCAGATGGTGTTGGAAATA 59.958 45.455 0.00 0.00 0.00 1.40
343 344 1.203162 TGGGCAGATGGTGTTGGAAAT 60.203 47.619 0.00 0.00 0.00 2.17
344 345 0.187117 TGGGCAGATGGTGTTGGAAA 59.813 50.000 0.00 0.00 0.00 3.13
345 346 0.187117 TTGGGCAGATGGTGTTGGAA 59.813 50.000 0.00 0.00 0.00 3.53
346 347 0.539438 GTTGGGCAGATGGTGTTGGA 60.539 55.000 0.00 0.00 0.00 3.53
347 348 1.535204 GGTTGGGCAGATGGTGTTGG 61.535 60.000 0.00 0.00 0.00 3.77
348 349 1.865788 CGGTTGGGCAGATGGTGTTG 61.866 60.000 0.00 0.00 0.00 3.33
349 350 1.603455 CGGTTGGGCAGATGGTGTT 60.603 57.895 0.00 0.00 0.00 3.32
350 351 2.034066 CGGTTGGGCAGATGGTGT 59.966 61.111 0.00 0.00 0.00 4.16
351 352 3.443045 GCGGTTGGGCAGATGGTG 61.443 66.667 0.00 0.00 0.00 4.17
352 353 2.786512 ATTGCGGTTGGGCAGATGGT 62.787 55.000 0.00 0.00 44.94 3.55
353 354 2.008268 GATTGCGGTTGGGCAGATGG 62.008 60.000 0.00 0.00 44.94 3.51
354 355 1.314534 TGATTGCGGTTGGGCAGATG 61.315 55.000 0.00 0.00 44.94 2.90
355 356 0.611618 TTGATTGCGGTTGGGCAGAT 60.612 50.000 0.00 0.00 44.94 2.90
356 357 1.228398 TTGATTGCGGTTGGGCAGA 60.228 52.632 0.00 0.00 44.94 4.26
357 358 1.080569 GTTGATTGCGGTTGGGCAG 60.081 57.895 0.00 0.00 44.94 4.85
358 359 1.829970 TGTTGATTGCGGTTGGGCA 60.830 52.632 0.00 0.00 42.12 5.36
359 360 1.372872 GTGTTGATTGCGGTTGGGC 60.373 57.895 0.00 0.00 0.00 5.36
360 361 1.288752 GGTGTTGATTGCGGTTGGG 59.711 57.895 0.00 0.00 0.00 4.12
361 362 1.081509 CGGTGTTGATTGCGGTTGG 60.082 57.895 0.00 0.00 0.00 3.77
362 363 0.030101 AACGGTGTTGATTGCGGTTG 59.970 50.000 0.00 0.00 0.00 3.77
363 364 0.030101 CAACGGTGTTGATTGCGGTT 59.970 50.000 3.65 0.00 0.00 4.44
364 365 0.816018 TCAACGGTGTTGATTGCGGT 60.816 50.000 8.21 0.00 0.00 5.68
365 366 0.110238 CTCAACGGTGTTGATTGCGG 60.110 55.000 12.31 0.00 0.00 5.69
366 367 0.865111 TCTCAACGGTGTTGATTGCG 59.135 50.000 12.31 2.26 0.00 4.85
367 368 2.483877 TCATCTCAACGGTGTTGATTGC 59.516 45.455 12.31 0.00 0.00 3.56
368 369 3.125829 CCTCATCTCAACGGTGTTGATTG 59.874 47.826 12.31 12.57 0.00 2.67
369 370 3.007940 TCCTCATCTCAACGGTGTTGATT 59.992 43.478 12.31 1.94 0.00 2.57
370 371 2.567169 TCCTCATCTCAACGGTGTTGAT 59.433 45.455 12.31 2.98 0.00 2.57
371 372 1.967779 TCCTCATCTCAACGGTGTTGA 59.032 47.619 11.48 11.48 0.00 3.18
372 373 2.029020 TCTCCTCATCTCAACGGTGTTG 60.029 50.000 0.00 3.33 0.00 3.33
373 374 2.028930 GTCTCCTCATCTCAACGGTGTT 60.029 50.000 0.00 0.00 0.00 3.32
374 375 1.546476 GTCTCCTCATCTCAACGGTGT 59.454 52.381 0.00 0.00 0.00 4.16
375 376 1.821753 AGTCTCCTCATCTCAACGGTG 59.178 52.381 0.00 0.00 0.00 4.94
376 377 2.096248 GAGTCTCCTCATCTCAACGGT 58.904 52.381 0.00 0.00 37.67 4.83
377 378 1.064803 CGAGTCTCCTCATCTCAACGG 59.935 57.143 0.00 0.00 37.59 4.44
378 379 2.010497 TCGAGTCTCCTCATCTCAACG 58.990 52.381 0.00 0.00 37.59 4.10
416 417 0.676466 TGGTGGCGATGGTGTTGATC 60.676 55.000 0.00 0.00 0.00 2.92
417 418 0.251121 TTGGTGGCGATGGTGTTGAT 60.251 50.000 0.00 0.00 0.00 2.57
418 419 1.149401 TTGGTGGCGATGGTGTTGA 59.851 52.632 0.00 0.00 0.00 3.18
419 420 1.285641 GTTGGTGGCGATGGTGTTG 59.714 57.895 0.00 0.00 0.00 3.33
420 421 1.901464 GGTTGGTGGCGATGGTGTT 60.901 57.895 0.00 0.00 0.00 3.32
421 422 1.485294 TAGGTTGGTGGCGATGGTGT 61.485 55.000 0.00 0.00 0.00 4.16
422 423 1.024579 GTAGGTTGGTGGCGATGGTG 61.025 60.000 0.00 0.00 0.00 4.17
423 424 1.198759 AGTAGGTTGGTGGCGATGGT 61.199 55.000 0.00 0.00 0.00 3.55
424 425 0.828022 TAGTAGGTTGGTGGCGATGG 59.172 55.000 0.00 0.00 0.00 3.51
425 426 2.684001 TTAGTAGGTTGGTGGCGATG 57.316 50.000 0.00 0.00 0.00 3.84
426 427 3.606687 CTTTTAGTAGGTTGGTGGCGAT 58.393 45.455 0.00 0.00 0.00 4.58
427 428 2.872842 GCTTTTAGTAGGTTGGTGGCGA 60.873 50.000 0.00 0.00 0.00 5.54
428 429 1.467342 GCTTTTAGTAGGTTGGTGGCG 59.533 52.381 0.00 0.00 0.00 5.69
429 430 1.816835 GGCTTTTAGTAGGTTGGTGGC 59.183 52.381 0.00 0.00 0.00 5.01
430 431 2.817844 GTGGCTTTTAGTAGGTTGGTGG 59.182 50.000 0.00 0.00 0.00 4.61
431 432 3.482436 TGTGGCTTTTAGTAGGTTGGTG 58.518 45.455 0.00 0.00 0.00 4.17
432 433 3.868619 TGTGGCTTTTAGTAGGTTGGT 57.131 42.857 0.00 0.00 0.00 3.67
433 434 3.057526 GCTTGTGGCTTTTAGTAGGTTGG 60.058 47.826 0.00 0.00 38.06 3.77
434 435 3.568007 TGCTTGTGGCTTTTAGTAGGTTG 59.432 43.478 0.00 0.00 42.39 3.77
435 436 3.821033 CTGCTTGTGGCTTTTAGTAGGTT 59.179 43.478 0.00 0.00 42.39 3.50
436 437 3.072476 TCTGCTTGTGGCTTTTAGTAGGT 59.928 43.478 0.00 0.00 42.39 3.08
437 438 3.674997 TCTGCTTGTGGCTTTTAGTAGG 58.325 45.455 0.00 0.00 42.39 3.18
438 439 4.033358 CGATCTGCTTGTGGCTTTTAGTAG 59.967 45.833 0.00 0.00 42.39 2.57
439 440 3.932710 CGATCTGCTTGTGGCTTTTAGTA 59.067 43.478 0.00 0.00 42.39 1.82
440 441 2.744202 CGATCTGCTTGTGGCTTTTAGT 59.256 45.455 0.00 0.00 42.39 2.24
441 442 2.096496 CCGATCTGCTTGTGGCTTTTAG 59.904 50.000 0.00 0.00 42.39 1.85
442 443 2.083774 CCGATCTGCTTGTGGCTTTTA 58.916 47.619 0.00 0.00 42.39 1.52
443 444 0.883833 CCGATCTGCTTGTGGCTTTT 59.116 50.000 0.00 0.00 42.39 2.27
444 445 0.962356 CCCGATCTGCTTGTGGCTTT 60.962 55.000 0.00 0.00 42.39 3.51
445 446 1.377725 CCCGATCTGCTTGTGGCTT 60.378 57.895 0.00 0.00 42.39 4.35
446 447 2.270205 CCCGATCTGCTTGTGGCT 59.730 61.111 0.00 0.00 42.39 4.75
447 448 2.825836 CCCCGATCTGCTTGTGGC 60.826 66.667 0.00 0.00 42.22 5.01
448 449 2.825836 GCCCCGATCTGCTTGTGG 60.826 66.667 0.00 0.00 0.00 4.17
449 450 2.825836 GGCCCCGATCTGCTTGTG 60.826 66.667 0.00 0.00 0.00 3.33
450 451 3.011517 AGGCCCCGATCTGCTTGT 61.012 61.111 0.00 0.00 0.00 3.16
451 452 2.203126 GAGGCCCCGATCTGCTTG 60.203 66.667 0.00 0.00 0.00 4.01
452 453 3.483869 GGAGGCCCCGATCTGCTT 61.484 66.667 0.00 0.00 0.00 3.91
730 1048 6.460781 ACTTTTGGTTTTCCTTTCGTTTTCT 58.539 32.000 0.00 0.00 41.38 2.52
806 1125 3.384532 TCGAGTTACCACCCGGGC 61.385 66.667 24.08 2.05 42.05 6.13
954 1274 2.449967 TACGGGAGGAACTGGCCAGA 62.450 60.000 39.19 9.77 41.55 3.86
955 1275 1.961180 CTACGGGAGGAACTGGCCAG 61.961 65.000 31.60 31.60 41.55 4.85
972 1301 2.357777 GGGGTTTCTTGCTATTGGCCTA 60.358 50.000 3.32 0.00 40.92 3.93
980 1309 0.179015 TGTTGCGGGGTTTCTTGCTA 60.179 50.000 0.00 0.00 0.00 3.49
1149 1484 3.330720 CCCACCTCCACCCTCACC 61.331 72.222 0.00 0.00 0.00 4.02
1176 1511 1.668151 GAACACGCTCCTCGCCTTT 60.668 57.895 0.00 0.00 43.23 3.11
1209 1544 2.760385 GGCTCGGCCTCCAGTACT 60.760 66.667 0.00 0.00 46.69 2.73
1368 1703 1.212441 TCCTCCTCCGAGTAGAACTCC 59.788 57.143 1.63 0.00 42.12 3.85
1392 1727 3.371063 TCGTGGTGCTCCTCGTCC 61.371 66.667 23.71 0.45 46.59 4.79
1455 1790 2.797156 CGGATCGAGTTCATAGCTTTGG 59.203 50.000 4.23 0.00 0.00 3.28
1465 1800 1.925185 GCTGGTAAACGGATCGAGTTC 59.075 52.381 5.79 0.00 0.00 3.01
1468 1803 0.099968 TCGCTGGTAAACGGATCGAG 59.900 55.000 0.00 0.00 0.00 4.04
1474 1809 1.202533 AGGATCATCGCTGGTAAACGG 60.203 52.381 0.00 0.00 0.00 4.44
1492 1827 2.115348 ACGTGCGTAATACGATGAGG 57.885 50.000 17.71 7.40 46.05 3.86
1540 1875 3.294943 GACGATCGAATTACTACACGGG 58.705 50.000 24.34 0.00 0.00 5.28
1573 1908 3.206150 TGGCTAGCAGCTTAATTAGTGC 58.794 45.455 18.24 7.96 41.99 4.40
1624 1959 1.911057 TCGATCCACAGACACAGAGT 58.089 50.000 0.00 0.00 0.00 3.24
1625 1960 3.119352 TGAATCGATCCACAGACACAGAG 60.119 47.826 0.00 0.00 0.00 3.35
1626 1961 2.825532 TGAATCGATCCACAGACACAGA 59.174 45.455 0.00 0.00 0.00 3.41
1627 1962 3.236632 TGAATCGATCCACAGACACAG 57.763 47.619 0.00 0.00 0.00 3.66
1671 2009 0.250338 AACCAGGTTCCACGCTCTTC 60.250 55.000 0.00 0.00 0.00 2.87
1732 2073 6.770746 AAGAAATGTTTCCTCCATCATCAG 57.229 37.500 2.04 0.00 37.92 2.90
1743 2084 7.254852 TGTGTGTGTTCTAAAGAAATGTTTCC 58.745 34.615 2.04 0.00 37.92 3.13
1753 2094 5.527214 TGTTCATCCTGTGTGTGTTCTAAAG 59.473 40.000 0.00 0.00 0.00 1.85
1758 2099 3.206150 AGTGTTCATCCTGTGTGTGTTC 58.794 45.455 0.00 0.00 0.00 3.18
1763 2104 1.881973 CCCAAGTGTTCATCCTGTGTG 59.118 52.381 0.00 0.00 0.00 3.82
1769 2110 1.247567 CACCACCCAAGTGTTCATCC 58.752 55.000 0.00 0.00 42.88 3.51
1774 2115 1.144913 ACATAGCACCACCCAAGTGTT 59.855 47.619 0.00 0.00 42.88 3.32
1789 2135 0.033504 ATCTGCGGCCGGTAACATAG 59.966 55.000 29.38 5.34 0.00 2.23
1790 2136 0.466543 AATCTGCGGCCGGTAACATA 59.533 50.000 29.38 9.22 0.00 2.29
1793 2139 1.152383 GAGAATCTGCGGCCGGTAAC 61.152 60.000 29.38 10.81 0.00 2.50
1795 2141 2.812499 GAGAATCTGCGGCCGGTA 59.188 61.111 29.38 6.22 0.00 4.02
1822 2168 1.145803 GTCGCGAGCCAAAAGTAGTT 58.854 50.000 10.24 0.00 0.00 2.24
1823 2169 1.007336 CGTCGCGAGCCAAAAGTAGT 61.007 55.000 10.24 0.00 0.00 2.73
1835 2181 1.516386 GCTCAGAAATCCGTCGCGA 60.516 57.895 3.71 3.71 0.00 5.87
1836 2182 1.805539 TGCTCAGAAATCCGTCGCG 60.806 57.895 0.00 0.00 0.00 5.87
1865 2246 4.072088 CGAACAACTCGCCACGGC 62.072 66.667 0.00 0.00 41.49 5.68
1877 2260 4.651008 GCCACGTCCGGTCGAACA 62.651 66.667 27.44 0.00 34.70 3.18
1879 2262 4.351938 CTGCCACGTCCGGTCGAA 62.352 66.667 27.44 8.88 34.70 3.71
1896 2279 1.143401 GGTTACGCCTCAGGGTAGC 59.857 63.158 0.00 0.00 41.84 3.58
1917 2300 1.878522 GCACCGATGACCAGCTACG 60.879 63.158 0.00 0.00 0.00 3.51
1919 2302 1.257750 ACAGCACCGATGACCAGCTA 61.258 55.000 0.00 0.00 33.59 3.32
1920 2303 2.267006 CAGCACCGATGACCAGCT 59.733 61.111 0.00 0.00 35.63 4.24
1921 2304 2.046892 ACAGCACCGATGACCAGC 60.047 61.111 0.00 0.00 0.00 4.85
1922 2305 1.742880 CCACAGCACCGATGACCAG 60.743 63.158 0.00 0.00 0.00 4.00
1924 2307 1.741770 GTCCACAGCACCGATGACC 60.742 63.158 0.00 0.00 0.00 4.02
1925 2308 2.094659 CGTCCACAGCACCGATGAC 61.095 63.158 0.00 0.00 0.00 3.06
1926 2309 2.261361 CGTCCACAGCACCGATGA 59.739 61.111 0.00 0.00 0.00 2.92
1927 2310 2.815211 CCGTCCACAGCACCGATG 60.815 66.667 0.00 0.00 0.00 3.84
1928 2311 3.296709 GACCGTCCACAGCACCGAT 62.297 63.158 0.00 0.00 0.00 4.18
1929 2312 3.986006 GACCGTCCACAGCACCGA 61.986 66.667 0.00 0.00 0.00 4.69
1930 2313 3.916392 GAGACCGTCCACAGCACCG 62.916 68.421 0.00 0.00 0.00 4.94
1931 2314 2.048127 GAGACCGTCCACAGCACC 60.048 66.667 0.00 0.00 0.00 5.01
1932 2315 0.320771 ATTGAGACCGTCCACAGCAC 60.321 55.000 0.00 0.00 0.00 4.40
1933 2316 0.320683 CATTGAGACCGTCCACAGCA 60.321 55.000 0.00 0.00 0.00 4.41
1934 2317 0.320771 ACATTGAGACCGTCCACAGC 60.321 55.000 0.00 0.00 0.00 4.40
1935 2318 1.000843 TGACATTGAGACCGTCCACAG 59.999 52.381 0.00 0.00 0.00 3.66
1936 2319 1.044611 TGACATTGAGACCGTCCACA 58.955 50.000 0.00 0.00 0.00 4.17
1942 2325 5.065602 ACATTGATCATTGACATTGAGACCG 59.934 40.000 21.32 0.00 0.00 4.79
1950 2333 3.383505 CCTGCCACATTGATCATTGACAT 59.616 43.478 21.32 0.00 0.00 3.06
1963 2346 4.437587 GCCTCCTGCCTGCCACAT 62.438 66.667 0.00 0.00 0.00 3.21
2143 2567 1.485124 TCCATCACTGATACACGCCT 58.515 50.000 0.00 0.00 0.00 5.52
2144 2568 2.533266 ATCCATCACTGATACACGCC 57.467 50.000 0.00 0.00 0.00 5.68
2146 2570 4.058721 TCCAATCCATCACTGATACACG 57.941 45.455 0.00 0.00 0.00 4.49
2148 2572 5.744007 GCTGATCCAATCCATCACTGATACA 60.744 44.000 0.00 0.00 0.00 2.29
2154 2579 2.748798 GCAGCTGATCCAATCCATCACT 60.749 50.000 20.43 0.00 0.00 3.41
2181 2606 5.933463 TCTGTTTGATTTGATTTGATTGGGC 59.067 36.000 0.00 0.00 0.00 5.36
2187 2612 6.647481 CCTGCATTCTGTTTGATTTGATTTGA 59.353 34.615 0.00 0.00 0.00 2.69
2188 2613 6.619874 GCCTGCATTCTGTTTGATTTGATTTG 60.620 38.462 0.00 0.00 0.00 2.32
2189 2614 5.410439 GCCTGCATTCTGTTTGATTTGATTT 59.590 36.000 0.00 0.00 0.00 2.17
2190 2615 4.933400 GCCTGCATTCTGTTTGATTTGATT 59.067 37.500 0.00 0.00 0.00 2.57
2191 2616 4.501071 GCCTGCATTCTGTTTGATTTGAT 58.499 39.130 0.00 0.00 0.00 2.57
2230 2662 2.161486 GCGGCTGTCACATCTCGTC 61.161 63.158 0.00 0.00 0.00 4.20
2303 2738 2.825075 AAGATCATGCACGCAGGGCA 62.825 55.000 7.88 7.88 46.66 5.36
2304 2739 2.056481 GAAGATCATGCACGCAGGGC 62.056 60.000 3.60 0.00 0.00 5.19
2305 2740 1.442526 GGAAGATCATGCACGCAGGG 61.443 60.000 3.60 0.00 0.00 4.45
2306 2741 0.745486 TGGAAGATCATGCACGCAGG 60.745 55.000 0.00 0.00 0.00 4.85
2307 2742 0.376152 GTGGAAGATCATGCACGCAG 59.624 55.000 6.83 0.00 31.90 5.18
2372 2807 1.360551 CGTGGCTGATCCGTAGAGG 59.639 63.158 0.00 0.00 42.97 3.69
2414 2854 1.153168 GGCATCGCATGGTAGGTGT 60.153 57.895 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.