Multiple sequence alignment - TraesCS2A01G151500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G151500 chr2A 100.000 2591 0 0 1 2591 99160792 99158202 0.000000e+00 4785.0
1 TraesCS2A01G151500 chr2A 84.015 538 66 14 1070 1591 19914002 19914535 1.380000e-137 499.0
2 TraesCS2A01G151500 chr2A 81.784 527 76 7 1083 1593 19928857 19929379 8.570000e-115 424.0
3 TraesCS2A01G151500 chr2A 97.312 186 5 0 2030 2215 256202448 256202263 1.500000e-82 316.0
4 TraesCS2A01G151500 chr2D 90.272 1285 49 31 651 1902 99737662 99736421 0.000000e+00 1611.0
5 TraesCS2A01G151500 chr2D 83.706 626 73 20 976 1591 99723342 99723948 4.840000e-157 564.0
6 TraesCS2A01G151500 chr2D 82.418 637 78 20 976 1591 99683347 99683970 2.280000e-145 525.0
7 TraesCS2A01G151500 chr2D 82.430 609 78 17 1000 1589 99703624 99704222 2.980000e-139 505.0
8 TraesCS2A01G151500 chr2D 82.784 546 71 13 1062 1591 99561378 99561916 1.400000e-127 466.0
9 TraesCS2A01G151500 chr2D 90.055 181 15 2 402 579 99738188 99738008 5.580000e-57 231.0
10 TraesCS2A01G151500 chr2D 90.769 130 7 1 1 125 99738690 99738561 4.430000e-38 169.0
11 TraesCS2A01G151500 chr2D 82.707 133 12 4 265 396 99738352 99738230 9.800000e-20 108.0
12 TraesCS2A01G151500 chr2B 89.833 1259 69 26 657 1897 151628475 151627258 0.000000e+00 1561.0
13 TraesCS2A01G151500 chr2B 82.486 531 74 14 1076 1591 30636973 30636447 5.090000e-122 448.0
14 TraesCS2A01G151500 chr2B 81.461 534 70 17 1073 1591 150948513 150947994 6.670000e-111 411.0
15 TraesCS2A01G151500 chr2B 86.141 368 46 3 1225 1591 150985236 150984873 2.420000e-105 392.0
16 TraesCS2A01G151500 chr2B 97.312 186 5 0 2030 2215 77779595 77779410 1.500000e-82 316.0
17 TraesCS2A01G151500 chr2B 92.308 208 15 1 2211 2417 151626893 151626686 7.010000e-76 294.0
18 TraesCS2A01G151500 chr2B 91.713 181 12 2 402 579 151643204 151643024 5.540000e-62 248.0
19 TraesCS2A01G151500 chr2B 97.959 49 1 0 2414 2462 151626568 151626520 4.590000e-13 86.1
20 TraesCS2A01G151500 chrUn 82.302 582 75 19 1027 1591 24377357 24376787 1.800000e-131 479.0
21 TraesCS2A01G151500 chr5A 97.849 186 4 0 2030 2215 139481191 139481376 3.220000e-84 322.0
22 TraesCS2A01G151500 chr5A 97.849 186 4 0 2030 2215 689655795 689655980 3.220000e-84 322.0
23 TraesCS2A01G151500 chr3B 97.849 186 4 0 2030 2215 536900996 536901181 3.220000e-84 322.0
24 TraesCS2A01G151500 chr3A 97.312 186 5 0 2030 2215 9772716 9772531 1.500000e-82 316.0
25 TraesCS2A01G151500 chr3A 97.312 186 5 0 2030 2215 222037961 222038146 1.500000e-82 316.0
26 TraesCS2A01G151500 chr1A 97.312 186 5 0 2030 2215 42225858 42226043 1.500000e-82 316.0
27 TraesCS2A01G151500 chr7B 95.025 201 8 2 2016 2216 19252973 19253171 5.380000e-82 315.0
28 TraesCS2A01G151500 chr1D 87.931 116 14 0 2213 2328 449450367 449450252 1.250000e-28 137.0
29 TraesCS2A01G151500 chr7D 87.097 62 5 2 280 338 2444215 2444154 1.660000e-07 67.6
30 TraesCS2A01G151500 chr7A 100.000 28 0 0 371 398 484534982 484535009 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G151500 chr2A 99158202 99160792 2590 True 4785.000000 4785 100.000000 1 2591 1 chr2A.!!$R1 2590
1 TraesCS2A01G151500 chr2A 19914002 19914535 533 False 499.000000 499 84.015000 1070 1591 1 chr2A.!!$F1 521
2 TraesCS2A01G151500 chr2A 19928857 19929379 522 False 424.000000 424 81.784000 1083 1593 1 chr2A.!!$F2 510
3 TraesCS2A01G151500 chr2D 99723342 99723948 606 False 564.000000 564 83.706000 976 1591 1 chr2D.!!$F4 615
4 TraesCS2A01G151500 chr2D 99736421 99738690 2269 True 529.750000 1611 88.450750 1 1902 4 chr2D.!!$R1 1901
5 TraesCS2A01G151500 chr2D 99683347 99683970 623 False 525.000000 525 82.418000 976 1591 1 chr2D.!!$F2 615
6 TraesCS2A01G151500 chr2D 99703624 99704222 598 False 505.000000 505 82.430000 1000 1589 1 chr2D.!!$F3 589
7 TraesCS2A01G151500 chr2D 99561378 99561916 538 False 466.000000 466 82.784000 1062 1591 1 chr2D.!!$F1 529
8 TraesCS2A01G151500 chr2B 151626520 151628475 1955 True 647.033333 1561 93.366667 657 2462 3 chr2B.!!$R6 1805
9 TraesCS2A01G151500 chr2B 30636447 30636973 526 True 448.000000 448 82.486000 1076 1591 1 chr2B.!!$R1 515
10 TraesCS2A01G151500 chr2B 150947994 150948513 519 True 411.000000 411 81.461000 1073 1591 1 chr2B.!!$R3 518
11 TraesCS2A01G151500 chrUn 24376787 24377357 570 True 479.000000 479 82.302000 1027 1591 1 chrUn.!!$R1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 66 0.107703 TGATGGAGGGATCAACGCAC 60.108 55.0 0.0 0.0 29.11 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1743 2218 0.034616 TGACACACGATCCACATGCA 59.965 50.0 0.0 0.0 0.0 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 66 0.107703 TGATGGAGGGATCAACGCAC 60.108 55.000 0.00 0.00 29.11 5.34
71 77 2.238942 TCAACGCACTGTGATCAAGT 57.761 45.000 12.86 0.61 0.00 3.16
95 101 4.260334 GCATGCTTTTGTTGTTTCTTGACC 60.260 41.667 11.37 0.00 0.00 4.02
96 102 3.855858 TGCTTTTGTTGTTTCTTGACCC 58.144 40.909 0.00 0.00 0.00 4.46
121 127 2.890474 CCTGCCGTGTATCACCGC 60.890 66.667 6.34 6.34 38.63 5.68
125 131 2.125832 CCGTGTATCACCGCCGTT 60.126 61.111 0.00 0.00 0.00 4.44
126 132 2.449525 CCGTGTATCACCGCCGTTG 61.450 63.158 0.00 0.00 0.00 4.10
127 133 1.735198 CGTGTATCACCGCCGTTGT 60.735 57.895 0.00 0.00 0.00 3.32
128 134 0.456482 CGTGTATCACCGCCGTTGTA 60.456 55.000 0.00 0.00 0.00 2.41
138 163 2.011222 CCGCCGTTGTAAATGTATGGT 58.989 47.619 0.00 0.00 0.00 3.55
146 171 4.475051 TGTAAATGTATGGTAGCACCGT 57.525 40.909 0.00 5.54 42.58 4.83
150 175 1.590792 GTATGGTAGCACCGTCCGC 60.591 63.158 0.00 0.00 42.58 5.54
151 176 2.053277 TATGGTAGCACCGTCCGCA 61.053 57.895 0.00 0.00 42.58 5.69
165 201 1.472480 GTCCGCATTGCCTTGTTGTAT 59.528 47.619 2.41 0.00 0.00 2.29
174 210 6.256321 GCATTGCCTTGTTGTATTTTGGATAG 59.744 38.462 0.00 0.00 0.00 2.08
191 227 8.706322 TTTGGATAGCAGTAGTATATGTGAGA 57.294 34.615 0.00 0.00 0.00 3.27
192 228 7.929941 TGGATAGCAGTAGTATATGTGAGAG 57.070 40.000 0.00 0.00 0.00 3.20
194 230 8.603304 TGGATAGCAGTAGTATATGTGAGAGTA 58.397 37.037 0.00 0.00 0.00 2.59
204 240 8.200024 AGTATATGTGAGAGTATTGCCATCTT 57.800 34.615 0.00 0.00 0.00 2.40
209 245 4.509600 GTGAGAGTATTGCCATCTTAGTGC 59.490 45.833 0.00 0.00 0.00 4.40
212 248 3.812053 GAGTATTGCCATCTTAGTGCCTG 59.188 47.826 0.00 0.00 0.00 4.85
213 249 2.062971 ATTGCCATCTTAGTGCCTGG 57.937 50.000 0.00 0.00 0.00 4.45
227 263 2.684881 GTGCCTGGAGTAATGGTGAATG 59.315 50.000 0.00 0.00 0.00 2.67
228 264 2.301346 GCCTGGAGTAATGGTGAATGG 58.699 52.381 0.00 0.00 0.00 3.16
229 265 2.357154 GCCTGGAGTAATGGTGAATGGT 60.357 50.000 0.00 0.00 0.00 3.55
230 266 3.282021 CCTGGAGTAATGGTGAATGGTG 58.718 50.000 0.00 0.00 0.00 4.17
231 267 3.054434 CCTGGAGTAATGGTGAATGGTGA 60.054 47.826 0.00 0.00 0.00 4.02
232 268 4.567537 CCTGGAGTAATGGTGAATGGTGAA 60.568 45.833 0.00 0.00 0.00 3.18
233 269 5.191727 TGGAGTAATGGTGAATGGTGAAT 57.808 39.130 0.00 0.00 0.00 2.57
234 270 6.320434 TGGAGTAATGGTGAATGGTGAATA 57.680 37.500 0.00 0.00 0.00 1.75
235 271 6.910191 TGGAGTAATGGTGAATGGTGAATAT 58.090 36.000 0.00 0.00 0.00 1.28
236 272 6.772233 TGGAGTAATGGTGAATGGTGAATATG 59.228 38.462 0.00 0.00 0.00 1.78
237 273 6.772716 GGAGTAATGGTGAATGGTGAATATGT 59.227 38.462 0.00 0.00 0.00 2.29
238 274 7.255242 GGAGTAATGGTGAATGGTGAATATGTG 60.255 40.741 0.00 0.00 0.00 3.21
239 275 7.345691 AGTAATGGTGAATGGTGAATATGTGA 58.654 34.615 0.00 0.00 0.00 3.58
263 299 3.073062 AGCTGTGGACATGGTAGAGTTTT 59.927 43.478 0.00 0.00 0.00 2.43
328 410 2.040679 GGCTGTGGGTTAACCTCCTTTA 59.959 50.000 23.69 4.81 41.11 1.85
329 411 3.499021 GGCTGTGGGTTAACCTCCTTTAA 60.499 47.826 23.69 3.12 41.11 1.52
330 412 4.146564 GCTGTGGGTTAACCTCCTTTAAA 58.853 43.478 23.69 1.68 41.11 1.52
331 413 4.585581 GCTGTGGGTTAACCTCCTTTAAAA 59.414 41.667 23.69 0.22 41.11 1.52
332 414 5.069383 GCTGTGGGTTAACCTCCTTTAAAAA 59.931 40.000 23.69 0.02 41.11 1.94
380 464 5.329035 CAATGCATTGTTAGGGCTACTTT 57.671 39.130 27.81 0.00 33.22 2.66
386 470 5.358160 GCATTGTTAGGGCTACTTTCTTCAT 59.642 40.000 0.00 0.00 0.00 2.57
396 480 5.452777 GCTACTTTCTTCATTGTCAACACC 58.547 41.667 0.00 0.00 0.00 4.16
398 482 5.757850 ACTTTCTTCATTGTCAACACCTC 57.242 39.130 0.00 0.00 0.00 3.85
399 483 5.192927 ACTTTCTTCATTGTCAACACCTCA 58.807 37.500 0.00 0.00 0.00 3.86
407 527 0.886490 GTCAACACCTCACAGCTGGG 60.886 60.000 19.93 15.69 0.00 4.45
408 528 2.113986 AACACCTCACAGCTGGGC 59.886 61.111 19.93 0.00 0.00 5.36
435 555 1.065053 TGCCAGTATGTACGGCCAAAT 60.065 47.619 2.24 0.00 41.68 2.32
440 560 2.933906 AGTATGTACGGCCAAATCAACG 59.066 45.455 2.24 0.00 0.00 4.10
441 561 2.102070 ATGTACGGCCAAATCAACGA 57.898 45.000 2.24 0.00 0.00 3.85
444 564 0.800012 TACGGCCAAATCAACGAAGC 59.200 50.000 2.24 0.00 0.00 3.86
449 569 1.792367 GCCAAATCAACGAAGCCAAAC 59.208 47.619 0.00 0.00 0.00 2.93
452 572 3.674753 CCAAATCAACGAAGCCAAACATC 59.325 43.478 0.00 0.00 0.00 3.06
541 662 7.491696 AGAAGAGTAGTGTTGTAGTTTTGTGAC 59.508 37.037 0.00 0.00 0.00 3.67
550 673 2.888834 AGTTTTGTGACCATGTTGCC 57.111 45.000 0.00 0.00 0.00 4.52
554 677 2.949177 TTGTGACCATGTTGCCTACT 57.051 45.000 0.00 0.00 0.00 2.57
564 687 4.439153 CCATGTTGCCTACTAAATGTGCAG 60.439 45.833 0.00 0.00 30.83 4.41
570 693 3.673323 GCCTACTAAATGTGCAGTTTGGC 60.673 47.826 7.15 7.30 36.63 4.52
579 702 0.743688 TGCAGTTTGGCGACATGTTT 59.256 45.000 0.00 0.00 42.32 2.83
580 703 1.268999 TGCAGTTTGGCGACATGTTTC 60.269 47.619 0.00 0.00 42.32 2.78
581 704 1.673760 CAGTTTGGCGACATGTTTCG 58.326 50.000 0.00 0.33 42.32 3.46
582 705 1.002900 CAGTTTGGCGACATGTTTCGT 60.003 47.619 0.00 0.00 42.32 3.85
583 706 2.222213 CAGTTTGGCGACATGTTTCGTA 59.778 45.455 0.00 0.00 42.32 3.43
585 708 1.434555 TTGGCGACATGTTTCGTAGG 58.565 50.000 0.00 0.00 42.32 3.18
586 709 0.319083 TGGCGACATGTTTCGTAGGT 59.681 50.000 0.00 0.00 41.26 3.08
587 710 1.545136 TGGCGACATGTTTCGTAGGTA 59.455 47.619 0.00 0.00 41.26 3.08
588 711 2.029200 TGGCGACATGTTTCGTAGGTAA 60.029 45.455 0.00 0.00 41.26 2.85
589 712 2.995258 GGCGACATGTTTCGTAGGTAAA 59.005 45.455 0.00 0.00 41.26 2.01
590 713 3.061697 GGCGACATGTTTCGTAGGTAAAG 59.938 47.826 0.00 0.00 41.26 1.85
591 714 3.676646 GCGACATGTTTCGTAGGTAAAGT 59.323 43.478 0.00 0.00 41.26 2.66
592 715 4.433805 GCGACATGTTTCGTAGGTAAAGTG 60.434 45.833 0.00 0.00 41.26 3.16
594 717 4.382291 ACATGTTTCGTAGGTAAAGTGCA 58.618 39.130 0.00 0.00 0.00 4.57
595 718 4.212636 ACATGTTTCGTAGGTAAAGTGCAC 59.787 41.667 9.40 9.40 0.00 4.57
596 719 2.796031 TGTTTCGTAGGTAAAGTGCACG 59.204 45.455 12.01 0.00 0.00 5.34
597 720 2.796593 GTTTCGTAGGTAAAGTGCACGT 59.203 45.455 12.01 5.01 34.39 4.49
598 721 3.913548 TTCGTAGGTAAAGTGCACGTA 57.086 42.857 12.01 5.14 34.39 3.57
599 722 3.476295 TCGTAGGTAAAGTGCACGTAG 57.524 47.619 12.01 0.00 34.39 3.51
601 724 2.733227 CGTAGGTAAAGTGCACGTAGGG 60.733 54.545 12.01 0.00 0.00 3.53
602 725 0.611714 AGGTAAAGTGCACGTAGGGG 59.388 55.000 12.01 0.00 0.00 4.79
603 726 0.609662 GGTAAAGTGCACGTAGGGGA 59.390 55.000 12.01 0.00 0.00 4.81
604 727 1.405121 GGTAAAGTGCACGTAGGGGAG 60.405 57.143 12.01 0.00 0.00 4.30
608 731 0.763035 AGTGCACGTAGGGGAGTTTT 59.237 50.000 12.01 0.00 0.00 2.43
610 733 0.887387 TGCACGTAGGGGAGTTTTGC 60.887 55.000 0.00 0.00 0.00 3.68
613 736 1.669760 CGTAGGGGAGTTTTGCGCA 60.670 57.895 5.66 5.66 0.00 6.09
614 737 1.024579 CGTAGGGGAGTTTTGCGCAT 61.025 55.000 12.75 0.00 0.00 4.73
615 738 1.741055 CGTAGGGGAGTTTTGCGCATA 60.741 52.381 12.75 2.60 0.00 3.14
617 740 1.463674 AGGGGAGTTTTGCGCATAAG 58.536 50.000 12.75 0.00 0.00 1.73
620 985 0.811281 GGAGTTTTGCGCATAAGCCT 59.189 50.000 12.75 7.21 37.52 4.58
629 994 2.364002 TGCGCATAAGCCTATGTCAGTA 59.636 45.455 5.66 0.00 37.76 2.74
630 995 2.989840 GCGCATAAGCCTATGTCAGTAG 59.010 50.000 0.30 0.00 37.76 2.57
631 996 3.305403 GCGCATAAGCCTATGTCAGTAGA 60.305 47.826 0.30 0.00 37.76 2.59
636 1001 7.041780 CGCATAAGCCTATGTCAGTAGAAAAAT 60.042 37.037 4.30 0.00 37.76 1.82
637 1002 9.273016 GCATAAGCCTATGTCAGTAGAAAAATA 57.727 33.333 4.30 0.00 37.76 1.40
655 1020 8.495260 AGAAAAATAAATAGTACTCCCAGAGGG 58.505 37.037 0.00 0.00 46.11 4.30
683 1081 1.126846 GATGAGGTTCAAAGTGACGCG 59.873 52.381 3.53 3.53 0.00 6.01
691 1089 0.729140 CAAAGTGACGCGGAAATGGC 60.729 55.000 12.47 0.00 0.00 4.40
759 1158 3.656559 ACAACGACACTATACCAACCAC 58.343 45.455 0.00 0.00 0.00 4.16
797 1196 3.004629 TCGCTACCGTTACTTTTCACTCA 59.995 43.478 0.00 0.00 35.54 3.41
806 1205 6.961554 CCGTTACTTTTCACTCAGATTTATGC 59.038 38.462 0.00 0.00 0.00 3.14
864 1272 0.321298 CACCGAACCAACCCCACTAG 60.321 60.000 0.00 0.00 0.00 2.57
875 1283 2.834113 ACCCCACTAGTATTGTCTGCT 58.166 47.619 0.00 0.00 0.00 4.24
883 1291 0.108138 GTATTGTCTGCTCCACGCCT 60.108 55.000 0.00 0.00 38.05 5.52
884 1292 1.136305 GTATTGTCTGCTCCACGCCTA 59.864 52.381 0.00 0.00 38.05 3.93
892 1300 5.067805 TGTCTGCTCCACGCCTATATATATG 59.932 44.000 5.44 0.00 38.05 1.78
893 1301 4.038042 TCTGCTCCACGCCTATATATATGC 59.962 45.833 5.44 9.32 38.05 3.14
895 1303 3.857383 GCTCCACGCCTATATATATGCGG 60.857 52.174 32.05 23.92 46.74 5.69
896 1304 3.558033 TCCACGCCTATATATATGCGGA 58.442 45.455 32.05 22.75 46.74 5.54
897 1305 4.149598 TCCACGCCTATATATATGCGGAT 58.850 43.478 32.05 18.15 46.74 4.18
898 1306 4.587262 TCCACGCCTATATATATGCGGATT 59.413 41.667 32.05 17.62 46.74 3.01
899 1307 5.069914 TCCACGCCTATATATATGCGGATTT 59.930 40.000 32.05 17.35 46.74 2.17
900 1308 5.177511 CCACGCCTATATATATGCGGATTTG 59.822 44.000 32.05 24.14 46.74 2.32
901 1309 4.750098 ACGCCTATATATATGCGGATTTGC 59.250 41.667 32.05 9.69 46.74 3.68
902 1310 4.991056 CGCCTATATATATGCGGATTTGCT 59.009 41.667 25.76 0.00 41.54 3.91
903 1311 5.466728 CGCCTATATATATGCGGATTTGCTT 59.533 40.000 25.76 0.00 41.54 3.91
904 1312 6.645003 CGCCTATATATATGCGGATTTGCTTA 59.355 38.462 25.76 0.00 41.54 3.09
905 1313 7.359264 CGCCTATATATATGCGGATTTGCTTAC 60.359 40.741 25.76 0.00 41.54 2.34
906 1314 7.441157 GCCTATATATATGCGGATTTGCTTACA 59.559 37.037 13.98 0.00 35.36 2.41
942 1350 0.758685 AGCCCTTCGATCAGCTAGCT 60.759 55.000 12.68 12.68 32.73 3.32
943 1351 0.962489 GCCCTTCGATCAGCTAGCTA 59.038 55.000 18.86 6.64 0.00 3.32
946 1354 2.030363 CCCTTCGATCAGCTAGCTACTG 60.030 54.545 18.86 6.51 36.44 2.74
949 1357 0.670706 CGATCAGCTAGCTACTGGCA 59.329 55.000 18.86 0.00 40.47 4.92
951 1359 1.686052 GATCAGCTAGCTACTGGCACT 59.314 52.381 18.86 0.00 40.47 4.40
952 1360 0.820226 TCAGCTAGCTACTGGCACTG 59.180 55.000 18.86 2.40 40.47 3.66
963 1371 2.880648 GGCACTGCCTGCTTAAGC 59.119 61.111 20.84 20.84 46.69 3.09
964 1372 1.973281 GGCACTGCCTGCTTAAGCA 60.973 57.895 27.67 27.67 46.69 3.91
965 1373 2.205243 GGCACTGCCTGCTTAAGCAC 62.205 60.000 26.06 17.49 46.68 4.40
1033 1464 1.377202 GCATCTTCAAGGGCCGTCA 60.377 57.895 0.00 0.00 0.00 4.35
1068 1499 2.165301 CCTGATCGGTTTCGGCGTC 61.165 63.158 6.85 0.00 36.95 5.19
1260 1718 1.308069 GCATGCTGGTGGTGTTCGAT 61.308 55.000 11.37 0.00 0.00 3.59
1687 2162 2.804527 CCGATTAGGAGTGATGCATGTG 59.195 50.000 2.46 0.00 45.00 3.21
1712 2187 1.174712 AAGCTGCTGCCGATGTGTTT 61.175 50.000 12.44 0.00 40.80 2.83
1716 2191 1.100463 TGCTGCCGATGTGTTTGTGT 61.100 50.000 0.00 0.00 0.00 3.72
1735 2210 0.667453 TTGTGATGTGCGTTGCATGT 59.333 45.000 0.00 0.00 41.91 3.21
1740 2215 2.050168 GTGCGTTGCATGTGTGGG 60.050 61.111 0.00 0.00 41.91 4.61
1741 2216 3.976000 TGCGTTGCATGTGTGGGC 61.976 61.111 0.00 0.00 31.71 5.36
1742 2217 3.976000 GCGTTGCATGTGTGGGCA 61.976 61.111 0.00 0.00 38.46 5.36
1743 2218 2.964174 CGTTGCATGTGTGGGCAT 59.036 55.556 0.00 0.00 40.17 4.40
1811 2286 6.093082 AGTGTAAAATGTACCGCACCTTTATC 59.907 38.462 0.00 0.00 0.00 1.75
1818 2293 1.073284 ACCGCACCTTTATCCTGTGTT 59.927 47.619 0.00 0.00 32.62 3.32
1819 2294 2.303600 ACCGCACCTTTATCCTGTGTTA 59.696 45.455 0.00 0.00 32.62 2.41
1826 2301 8.495949 CGCACCTTTATCCTGTGTTATATAAAG 58.504 37.037 0.00 0.00 39.76 1.85
1849 2324 7.275888 AGACTCACTTTGCAAATGATAACAA 57.724 32.000 13.23 0.00 0.00 2.83
1861 2336 6.183360 GCAAATGATAACAACCCTAGCTCATT 60.183 38.462 0.00 0.00 34.33 2.57
1877 2352 2.068519 TCATTGCTGTAGAAGTGCACG 58.931 47.619 12.01 0.00 36.37 5.34
1902 2377 0.899717 GCCAGATCACCCAAAAGCCA 60.900 55.000 0.00 0.00 0.00 4.75
1903 2378 1.631405 CCAGATCACCCAAAAGCCAA 58.369 50.000 0.00 0.00 0.00 4.52
1904 2379 1.969923 CCAGATCACCCAAAAGCCAAA 59.030 47.619 0.00 0.00 0.00 3.28
1905 2380 2.368221 CCAGATCACCCAAAAGCCAAAA 59.632 45.455 0.00 0.00 0.00 2.44
1906 2381 3.181456 CCAGATCACCCAAAAGCCAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
1935 2578 3.088532 GTTGATAACATGCCTTCCACCA 58.911 45.455 0.00 0.00 0.00 4.17
1956 2599 4.821805 CCATGGGTGAATCTATGTACCAAC 59.178 45.833 2.85 0.00 34.89 3.77
1962 2605 6.039382 GGGTGAATCTATGTACCAACCAATTC 59.961 42.308 0.00 0.00 34.85 2.17
1978 2621 3.004734 CCAATTCCAACACTTCACCTCAC 59.995 47.826 0.00 0.00 0.00 3.51
1981 2624 1.202486 TCCAACACTTCACCTCACGTC 60.202 52.381 0.00 0.00 0.00 4.34
1992 2635 4.142790 TCACCTCACGTCTAGACTCTTTT 58.857 43.478 20.34 0.00 0.00 2.27
2002 2645 5.869888 CGTCTAGACTCTTTTGGTGCTTAAT 59.130 40.000 20.34 0.00 0.00 1.40
2003 2646 6.369065 CGTCTAGACTCTTTTGGTGCTTAATT 59.631 38.462 20.34 0.00 0.00 1.40
2004 2647 7.544566 CGTCTAGACTCTTTTGGTGCTTAATTA 59.455 37.037 20.34 0.00 0.00 1.40
2005 2648 8.874816 GTCTAGACTCTTTTGGTGCTTAATTAG 58.125 37.037 15.91 0.00 0.00 1.73
2009 2652 6.481643 ACTCTTTTGGTGCTTAATTAGGCTA 58.518 36.000 19.03 4.70 0.00 3.93
2019 2662 7.229506 GGTGCTTAATTAGGCTAAGATCAATGT 59.770 37.037 19.03 0.00 0.00 2.71
2025 2668 4.592485 AGGCTAAGATCAATGTAGACCG 57.408 45.455 0.00 0.00 0.00 4.79
2029 2672 4.752101 GCTAAGATCAATGTAGACCGCAAT 59.248 41.667 0.00 0.00 0.00 3.56
2031 2674 6.238484 GCTAAGATCAATGTAGACCGCAATTT 60.238 38.462 0.00 0.00 0.00 1.82
2032 2675 6.515272 AAGATCAATGTAGACCGCAATTTT 57.485 33.333 0.00 0.00 0.00 1.82
2058 2701 4.686972 TGAGCATCAGTACAGACATAAGC 58.313 43.478 0.00 0.00 42.56 3.09
2059 2702 3.711086 AGCATCAGTACAGACATAAGCG 58.289 45.455 0.00 0.00 0.00 4.68
2062 2705 4.026475 GCATCAGTACAGACATAAGCGTTC 60.026 45.833 0.00 0.00 0.00 3.95
2063 2706 4.776795 TCAGTACAGACATAAGCGTTCA 57.223 40.909 0.00 0.00 0.00 3.18
2064 2707 5.324784 TCAGTACAGACATAAGCGTTCAT 57.675 39.130 0.00 0.00 0.00 2.57
2065 2708 6.445357 TCAGTACAGACATAAGCGTTCATA 57.555 37.500 0.00 0.00 0.00 2.15
2066 2709 7.039313 TCAGTACAGACATAAGCGTTCATAT 57.961 36.000 0.00 0.00 0.00 1.78
2067 2710 8.161699 TCAGTACAGACATAAGCGTTCATATA 57.838 34.615 0.00 0.00 0.00 0.86
2068 2711 8.074370 TCAGTACAGACATAAGCGTTCATATAC 58.926 37.037 0.00 0.00 0.00 1.47
2070 2713 7.861372 AGTACAGACATAAGCGTTCATATACAC 59.139 37.037 0.00 0.00 0.00 2.90
2071 2714 5.685954 ACAGACATAAGCGTTCATATACACG 59.314 40.000 2.21 2.21 39.49 4.49
2072 2715 5.685954 CAGACATAAGCGTTCATATACACGT 59.314 40.000 7.48 0.00 38.70 4.49
2073 2716 5.685954 AGACATAAGCGTTCATATACACGTG 59.314 40.000 15.48 15.48 38.70 4.49
2074 2717 4.208460 ACATAAGCGTTCATATACACGTGC 59.792 41.667 17.22 0.00 38.70 5.34
2075 2718 2.287393 AGCGTTCATATACACGTGCA 57.713 45.000 17.22 2.06 38.70 4.57
2076 2719 2.821546 AGCGTTCATATACACGTGCAT 58.178 42.857 17.22 11.52 38.70 3.96
2077 2720 3.972403 AGCGTTCATATACACGTGCATA 58.028 40.909 17.22 13.68 38.70 3.14
2078 2721 3.734231 AGCGTTCATATACACGTGCATAC 59.266 43.478 17.22 2.28 38.70 2.39
2079 2722 3.487942 GCGTTCATATACACGTGCATACA 59.512 43.478 17.22 0.14 38.70 2.29
2083 2726 5.508200 TCATATACACGTGCATACACTCA 57.492 39.130 17.22 0.00 45.10 3.41
2084 2727 6.084326 TCATATACACGTGCATACACTCAT 57.916 37.500 17.22 0.00 45.10 2.90
2085 2728 6.149633 TCATATACACGTGCATACACTCATC 58.850 40.000 17.22 0.00 45.10 2.92
2086 2729 2.010145 ACACGTGCATACACTCATCC 57.990 50.000 17.22 0.00 45.10 3.51
2089 2732 3.194755 ACACGTGCATACACTCATCCTTA 59.805 43.478 17.22 0.00 45.10 2.69
2090 2733 4.141937 ACACGTGCATACACTCATCCTTAT 60.142 41.667 17.22 0.00 45.10 1.73
2091 2734 4.209911 CACGTGCATACACTCATCCTTATG 59.790 45.833 0.82 0.00 45.10 1.90
2093 2736 5.049828 CGTGCATACACTCATCCTTATGAA 58.950 41.667 0.00 0.00 45.10 2.57
2094 2737 5.050769 CGTGCATACACTCATCCTTATGAAC 60.051 44.000 0.00 0.00 45.10 3.18
2096 2739 4.084328 GCATACACTCATCCTTATGAACGC 60.084 45.833 0.00 0.00 41.57 4.84
2097 2740 3.610040 ACACTCATCCTTATGAACGCA 57.390 42.857 0.00 0.00 41.57 5.24
2098 2741 3.262420 ACACTCATCCTTATGAACGCAC 58.738 45.455 0.00 0.00 41.57 5.34
2099 2742 3.261580 CACTCATCCTTATGAACGCACA 58.738 45.455 0.00 0.00 41.57 4.57
2100 2743 3.062639 CACTCATCCTTATGAACGCACAC 59.937 47.826 0.00 0.00 41.57 3.82
2101 2744 3.261580 CTCATCCTTATGAACGCACACA 58.738 45.455 0.00 0.00 41.57 3.72
2102 2745 3.000041 TCATCCTTATGAACGCACACAC 59.000 45.455 0.00 0.00 39.20 3.82
2103 2746 1.424403 TCCTTATGAACGCACACACG 58.576 50.000 0.00 0.00 39.50 4.49
2104 2747 0.179225 CCTTATGAACGCACACACGC 60.179 55.000 0.00 0.00 36.19 5.34
2105 2748 0.510790 CTTATGAACGCACACACGCA 59.489 50.000 0.00 0.00 36.19 5.24
2106 2749 0.233590 TTATGAACGCACACACGCAC 59.766 50.000 0.00 0.00 36.19 5.34
2107 2750 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
2108 2751 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
2109 2752 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
2112 2755 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
2113 2756 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
2114 2757 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
2115 2758 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
2116 2759 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
2117 2760 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
2118 2761 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
2119 2762 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
2120 2763 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
2121 2764 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
2122 2765 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
2123 2766 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
2124 2767 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
2125 2768 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
2126 2769 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
2127 2770 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
2128 2771 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
2129 2772 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
2130 2773 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
2131 2774 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
2132 2775 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
2133 2776 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
2134 2777 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
2135 2778 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
2136 2779 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
2137 2780 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
2138 2781 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
2139 2782 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
2140 2783 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
2141 2784 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
2142 2785 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
2143 2786 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
2144 2787 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
2145 2788 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
2146 2789 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
2147 2790 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
2148 2791 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
2149 2792 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
2150 2793 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
2151 2794 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
2152 2795 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
2153 2796 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2154 2797 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2155 2798 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2156 2799 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2157 2800 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2158 2801 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
2159 2802 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
2160 2803 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
2161 2804 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
2162 2805 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
2163 2806 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
2164 2807 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
2165 2808 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
2166 2809 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
2167 2810 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
2168 2811 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
2169 2812 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
2170 2813 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
2171 2814 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
2172 2815 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
2173 2816 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
2174 2817 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
2175 2818 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
2176 2819 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
2177 2820 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
2190 2833 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
2191 2834 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
2223 2866 3.452627 TCTCCTCCCACTGAGCTATTTTC 59.547 47.826 0.00 0.00 39.98 2.29
2274 2917 6.937465 AGTGAAGTGAAAAGAGGGTAAAGATC 59.063 38.462 0.00 0.00 0.00 2.75
2292 2935 4.159557 AGATCTCTTCCATCCTTCCTAGC 58.840 47.826 0.00 0.00 0.00 3.42
2313 2956 0.825010 CCTTGTGCTTGCACCCTCTT 60.825 55.000 21.01 0.00 0.00 2.85
2314 2957 0.313043 CTTGTGCTTGCACCCTCTTG 59.687 55.000 21.01 3.59 0.00 3.02
2315 2958 0.106769 TTGTGCTTGCACCCTCTTGA 60.107 50.000 21.01 0.00 0.00 3.02
2316 2959 0.819259 TGTGCTTGCACCCTCTTGAC 60.819 55.000 21.01 0.00 0.00 3.18
2317 2960 1.597854 TGCTTGCACCCTCTTGACG 60.598 57.895 0.00 0.00 0.00 4.35
2318 2961 2.970974 GCTTGCACCCTCTTGACGC 61.971 63.158 0.00 0.00 0.00 5.19
2345 2989 8.842358 TTTTTCATACTCCAACTAGTTACCAG 57.158 34.615 8.04 6.92 0.00 4.00
2372 3016 8.635765 AAAGTCTAAATTTATGGACAAGAGCA 57.364 30.769 15.90 0.00 0.00 4.26
2378 3022 2.975732 TATGGACAAGAGCAGAGCTG 57.024 50.000 0.00 0.00 39.88 4.24
2448 3213 6.482641 CCACATAGAAATGAGAAGATGGACAG 59.517 42.308 0.00 0.00 36.54 3.51
2462 3227 5.738909 AGATGGACAGTTACCTTGATCTTG 58.261 41.667 0.00 0.00 0.00 3.02
2463 3228 5.485353 AGATGGACAGTTACCTTGATCTTGA 59.515 40.000 0.00 0.00 0.00 3.02
2464 3229 5.152623 TGGACAGTTACCTTGATCTTGAG 57.847 43.478 0.00 0.00 0.00 3.02
2465 3230 4.020218 TGGACAGTTACCTTGATCTTGAGG 60.020 45.833 8.29 8.29 39.02 3.86
2467 3232 5.153950 ACAGTTACCTTGATCTTGAGGTC 57.846 43.478 16.03 6.66 44.88 3.85
2468 3233 4.841246 ACAGTTACCTTGATCTTGAGGTCT 59.159 41.667 16.03 8.34 44.88 3.85
2469 3234 5.308237 ACAGTTACCTTGATCTTGAGGTCTT 59.692 40.000 16.03 4.73 44.88 3.01
2470 3235 5.641209 CAGTTACCTTGATCTTGAGGTCTTG 59.359 44.000 16.03 10.88 44.88 3.02
2471 3236 5.308237 AGTTACCTTGATCTTGAGGTCTTGT 59.692 40.000 16.03 2.34 44.88 3.16
2472 3237 4.278975 ACCTTGATCTTGAGGTCTTGTC 57.721 45.455 9.35 0.00 42.53 3.18
2473 3238 3.648067 ACCTTGATCTTGAGGTCTTGTCA 59.352 43.478 9.35 0.00 42.53 3.58
2474 3239 4.288105 ACCTTGATCTTGAGGTCTTGTCAT 59.712 41.667 9.35 0.00 42.53 3.06
2475 3240 4.874966 CCTTGATCTTGAGGTCTTGTCATC 59.125 45.833 0.00 0.00 0.00 2.92
2476 3241 5.338219 CCTTGATCTTGAGGTCTTGTCATCT 60.338 44.000 0.00 0.00 0.00 2.90
2477 3242 5.752036 TGATCTTGAGGTCTTGTCATCTT 57.248 39.130 0.00 0.00 0.00 2.40
2478 3243 5.728471 TGATCTTGAGGTCTTGTCATCTTC 58.272 41.667 0.00 0.00 0.00 2.87
2479 3244 5.483231 TGATCTTGAGGTCTTGTCATCTTCT 59.517 40.000 0.00 0.00 0.00 2.85
2480 3245 5.398603 TCTTGAGGTCTTGTCATCTTCTC 57.601 43.478 0.00 0.00 0.00 2.87
2481 3246 5.083122 TCTTGAGGTCTTGTCATCTTCTCT 58.917 41.667 0.00 0.00 0.00 3.10
2482 3247 5.541868 TCTTGAGGTCTTGTCATCTTCTCTT 59.458 40.000 0.00 0.00 0.00 2.85
2483 3248 5.398603 TGAGGTCTTGTCATCTTCTCTTC 57.601 43.478 0.00 0.00 0.00 2.87
2484 3249 5.083122 TGAGGTCTTGTCATCTTCTCTTCT 58.917 41.667 0.00 0.00 0.00 2.85
2485 3250 5.541868 TGAGGTCTTGTCATCTTCTCTTCTT 59.458 40.000 0.00 0.00 0.00 2.52
2486 3251 6.036577 AGGTCTTGTCATCTTCTCTTCTTC 57.963 41.667 0.00 0.00 0.00 2.87
2487 3252 5.779771 AGGTCTTGTCATCTTCTCTTCTTCT 59.220 40.000 0.00 0.00 0.00 2.85
2488 3253 6.269769 AGGTCTTGTCATCTTCTCTTCTTCTT 59.730 38.462 0.00 0.00 0.00 2.52
2489 3254 6.589907 GGTCTTGTCATCTTCTCTTCTTCTTC 59.410 42.308 0.00 0.00 0.00 2.87
2490 3255 6.589907 GTCTTGTCATCTTCTCTTCTTCTTCC 59.410 42.308 0.00 0.00 0.00 3.46
2491 3256 6.496565 TCTTGTCATCTTCTCTTCTTCTTCCT 59.503 38.462 0.00 0.00 0.00 3.36
2492 3257 6.678568 TGTCATCTTCTCTTCTTCTTCCTT 57.321 37.500 0.00 0.00 0.00 3.36
2493 3258 6.696411 TGTCATCTTCTCTTCTTCTTCCTTC 58.304 40.000 0.00 0.00 0.00 3.46
2494 3259 6.496565 TGTCATCTTCTCTTCTTCTTCCTTCT 59.503 38.462 0.00 0.00 0.00 2.85
2495 3260 7.035612 GTCATCTTCTCTTCTTCTTCCTTCTC 58.964 42.308 0.00 0.00 0.00 2.87
2496 3261 5.993748 TCTTCTCTTCTTCTTCCTTCTCC 57.006 43.478 0.00 0.00 0.00 3.71
2497 3262 5.650283 TCTTCTCTTCTTCTTCCTTCTCCT 58.350 41.667 0.00 0.00 0.00 3.69
2498 3263 6.081356 TCTTCTCTTCTTCTTCCTTCTCCTT 58.919 40.000 0.00 0.00 0.00 3.36
2499 3264 5.993748 TCTCTTCTTCTTCCTTCTCCTTC 57.006 43.478 0.00 0.00 0.00 3.46
2500 3265 5.650283 TCTCTTCTTCTTCCTTCTCCTTCT 58.350 41.667 0.00 0.00 0.00 2.85
2501 3266 6.795590 TCTCTTCTTCTTCCTTCTCCTTCTA 58.204 40.000 0.00 0.00 0.00 2.10
2502 3267 6.889722 TCTCTTCTTCTTCCTTCTCCTTCTAG 59.110 42.308 0.00 0.00 0.00 2.43
2503 3268 6.795590 TCTTCTTCTTCCTTCTCCTTCTAGA 58.204 40.000 0.00 0.00 0.00 2.43
2504 3269 7.418378 TCTTCTTCTTCCTTCTCCTTCTAGAT 58.582 38.462 0.00 0.00 0.00 1.98
2505 3270 7.559897 TCTTCTTCTTCCTTCTCCTTCTAGATC 59.440 40.741 0.00 0.00 0.00 2.75
2506 3271 6.980577 TCTTCTTCCTTCTCCTTCTAGATCT 58.019 40.000 0.00 0.00 0.00 2.75
2507 3272 7.418378 TCTTCTTCCTTCTCCTTCTAGATCTT 58.582 38.462 0.00 0.00 0.00 2.40
2508 3273 8.561769 TCTTCTTCCTTCTCCTTCTAGATCTTA 58.438 37.037 0.00 0.00 0.00 2.10
2509 3274 9.196139 CTTCTTCCTTCTCCTTCTAGATCTTAA 57.804 37.037 0.00 0.00 0.00 1.85
2510 3275 9.722317 TTCTTCCTTCTCCTTCTAGATCTTAAT 57.278 33.333 0.00 0.00 0.00 1.40
2527 3292 9.553064 AGATCTTAATATGATGTCTGTTTGGTC 57.447 33.333 0.00 0.00 0.00 4.02
2528 3293 8.682936 ATCTTAATATGATGTCTGTTTGGTCC 57.317 34.615 0.00 0.00 0.00 4.46
2529 3294 7.861629 TCTTAATATGATGTCTGTTTGGTCCT 58.138 34.615 0.00 0.00 0.00 3.85
2530 3295 8.328758 TCTTAATATGATGTCTGTTTGGTCCTT 58.671 33.333 0.00 0.00 0.00 3.36
2531 3296 8.506168 TTAATATGATGTCTGTTTGGTCCTTC 57.494 34.615 0.00 0.00 0.00 3.46
2532 3297 3.140325 TGATGTCTGTTTGGTCCTTCC 57.860 47.619 0.00 0.00 0.00 3.46
2533 3298 2.224769 TGATGTCTGTTTGGTCCTTCCC 60.225 50.000 0.00 0.00 34.77 3.97
2534 3299 1.217916 TGTCTGTTTGGTCCTTCCCA 58.782 50.000 0.00 0.00 34.77 4.37
2535 3300 1.566703 TGTCTGTTTGGTCCTTCCCAA 59.433 47.619 0.00 0.00 42.69 4.12
2536 3301 2.176798 TGTCTGTTTGGTCCTTCCCAAT 59.823 45.455 0.00 0.00 43.77 3.16
2537 3302 2.558359 GTCTGTTTGGTCCTTCCCAATG 59.442 50.000 0.00 0.00 43.77 2.82
2538 3303 1.273327 CTGTTTGGTCCTTCCCAATGC 59.727 52.381 0.00 0.00 43.77 3.56
2539 3304 0.608130 GTTTGGTCCTTCCCAATGCC 59.392 55.000 0.00 0.00 43.77 4.40
2540 3305 0.486879 TTTGGTCCTTCCCAATGCCT 59.513 50.000 0.00 0.00 43.77 4.75
2541 3306 0.486879 TTGGTCCTTCCCAATGCCTT 59.513 50.000 0.00 0.00 39.56 4.35
2542 3307 0.039618 TGGTCCTTCCCAATGCCTTC 59.960 55.000 0.00 0.00 34.77 3.46
2543 3308 0.039618 GGTCCTTCCCAATGCCTTCA 59.960 55.000 0.00 0.00 0.00 3.02
2544 3309 1.467920 GTCCTTCCCAATGCCTTCAG 58.532 55.000 0.00 0.00 0.00 3.02
2545 3310 1.075601 TCCTTCCCAATGCCTTCAGT 58.924 50.000 0.00 0.00 0.00 3.41
2546 3311 1.180029 CCTTCCCAATGCCTTCAGTG 58.820 55.000 0.00 0.00 37.97 3.66
2547 3312 0.529378 CTTCCCAATGCCTTCAGTGC 59.471 55.000 0.00 0.00 37.00 4.40
2548 3313 0.112995 TTCCCAATGCCTTCAGTGCT 59.887 50.000 0.00 0.00 37.00 4.40
2549 3314 0.112995 TCCCAATGCCTTCAGTGCTT 59.887 50.000 0.00 0.00 37.00 3.91
2550 3315 0.245539 CCCAATGCCTTCAGTGCTTG 59.754 55.000 0.00 0.00 37.00 4.01
2551 3316 0.389426 CCAATGCCTTCAGTGCTTGC 60.389 55.000 0.00 0.00 37.00 4.01
2552 3317 0.601558 CAATGCCTTCAGTGCTTGCT 59.398 50.000 0.00 0.00 31.23 3.91
2553 3318 0.886563 AATGCCTTCAGTGCTTGCTC 59.113 50.000 0.00 0.00 0.00 4.26
2554 3319 0.037877 ATGCCTTCAGTGCTTGCTCT 59.962 50.000 0.00 0.00 0.00 4.09
2555 3320 0.887836 TGCCTTCAGTGCTTGCTCTG 60.888 55.000 15.85 15.85 0.00 3.35
2556 3321 0.604780 GCCTTCAGTGCTTGCTCTGA 60.605 55.000 19.31 19.31 38.66 3.27
2557 3322 1.949547 GCCTTCAGTGCTTGCTCTGAT 60.950 52.381 22.40 0.00 39.85 2.90
2558 3323 2.008329 CCTTCAGTGCTTGCTCTGATC 58.992 52.381 22.40 0.00 39.85 2.92
2559 3324 2.008329 CTTCAGTGCTTGCTCTGATCC 58.992 52.381 22.40 0.00 39.85 3.36
2560 3325 1.273759 TCAGTGCTTGCTCTGATCCT 58.726 50.000 19.31 0.00 36.04 3.24
2561 3326 1.066358 TCAGTGCTTGCTCTGATCCTG 60.066 52.381 19.31 0.00 36.04 3.86
2562 3327 1.066358 CAGTGCTTGCTCTGATCCTGA 60.066 52.381 16.71 0.00 34.02 3.86
2563 3328 1.207570 AGTGCTTGCTCTGATCCTGAG 59.792 52.381 8.07 8.07 33.52 3.35
2568 3333 3.383092 GCTCTGATCCTGAGCTTGG 57.617 57.895 22.69 0.00 46.81 3.61
2569 3334 0.179051 GCTCTGATCCTGAGCTTGGG 60.179 60.000 22.69 3.58 46.81 4.12
2570 3335 0.469070 CTCTGATCCTGAGCTTGGGG 59.531 60.000 6.83 1.23 0.00 4.96
2571 3336 0.252881 TCTGATCCTGAGCTTGGGGT 60.253 55.000 6.83 0.00 0.00 4.95
2572 3337 0.179936 CTGATCCTGAGCTTGGGGTC 59.820 60.000 10.98 10.98 40.08 4.46
2573 3338 1.144936 GATCCTGAGCTTGGGGTCG 59.855 63.158 6.83 0.00 42.30 4.79
2574 3339 1.306141 ATCCTGAGCTTGGGGTCGA 60.306 57.895 6.83 0.00 42.30 4.20
2575 3340 1.333636 ATCCTGAGCTTGGGGTCGAG 61.334 60.000 6.83 0.00 42.30 4.04
2580 3345 2.347490 GCTTGGGGTCGAGCTTGA 59.653 61.111 15.18 0.00 44.93 3.02
2581 3346 1.743252 GCTTGGGGTCGAGCTTGAG 60.743 63.158 15.18 10.36 44.93 3.02
2582 3347 1.674057 CTTGGGGTCGAGCTTGAGT 59.326 57.895 15.18 0.00 0.00 3.41
2583 3348 0.671781 CTTGGGGTCGAGCTTGAGTG 60.672 60.000 15.18 0.00 0.00 3.51
2584 3349 1.118965 TTGGGGTCGAGCTTGAGTGA 61.119 55.000 15.18 0.00 0.00 3.41
2585 3350 1.216710 GGGGTCGAGCTTGAGTGAG 59.783 63.158 15.18 0.00 0.00 3.51
2586 3351 1.216710 GGGTCGAGCTTGAGTGAGG 59.783 63.158 15.18 0.00 0.00 3.86
2587 3352 1.216710 GGTCGAGCTTGAGTGAGGG 59.783 63.158 3.10 0.00 0.00 4.30
2588 3353 1.536943 GGTCGAGCTTGAGTGAGGGT 61.537 60.000 3.10 0.00 0.00 4.34
2589 3354 0.389166 GTCGAGCTTGAGTGAGGGTG 60.389 60.000 3.10 0.00 0.00 4.61
2590 3355 0.539669 TCGAGCTTGAGTGAGGGTGA 60.540 55.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 1.296392 CAGTGCGTTGATCCCTCCA 59.704 57.895 0.00 0.00 0.00 3.86
60 66 3.570926 AAAGCATGCACTTGATCACAG 57.429 42.857 21.98 0.00 0.00 3.66
71 77 4.329528 GTCAAGAAACAACAAAAGCATGCA 59.670 37.500 21.98 0.00 0.00 3.96
95 101 2.233605 TACACGGCAGGACCAATCGG 62.234 60.000 0.00 0.00 39.03 4.18
96 102 0.179084 ATACACGGCAGGACCAATCG 60.179 55.000 0.00 0.00 39.03 3.34
121 127 4.034742 GGTGCTACCATACATTTACAACGG 59.965 45.833 1.01 0.00 38.42 4.44
125 131 4.435425 GACGGTGCTACCATACATTTACA 58.565 43.478 6.21 0.00 38.47 2.41
126 132 3.805971 GGACGGTGCTACCATACATTTAC 59.194 47.826 6.21 0.00 38.47 2.01
127 133 3.491276 CGGACGGTGCTACCATACATTTA 60.491 47.826 0.00 0.00 38.47 1.40
128 134 2.740580 CGGACGGTGCTACCATACATTT 60.741 50.000 0.00 0.00 38.47 2.32
138 163 2.817834 GCAATGCGGACGGTGCTA 60.818 61.111 0.00 0.00 34.13 3.49
146 171 1.832883 ATACAACAAGGCAATGCGGA 58.167 45.000 0.00 0.00 0.00 5.54
150 175 6.256321 GCTATCCAAAATACAACAAGGCAATG 59.744 38.462 0.00 0.00 0.00 2.82
151 176 6.070881 TGCTATCCAAAATACAACAAGGCAAT 60.071 34.615 0.00 0.00 0.00 3.56
165 201 9.143155 TCTCACATATACTACTGCTATCCAAAA 57.857 33.333 0.00 0.00 0.00 2.44
174 210 6.809196 GGCAATACTCTCACATATACTACTGC 59.191 42.308 0.00 0.00 0.00 4.40
184 220 6.286758 CACTAAGATGGCAATACTCTCACAT 58.713 40.000 0.00 0.00 0.00 3.21
187 223 4.443457 GGCACTAAGATGGCAATACTCTCA 60.443 45.833 0.00 0.00 44.34 3.27
197 233 0.543749 ACTCCAGGCACTAAGATGGC 59.456 55.000 0.00 0.00 45.26 4.40
204 240 2.827755 TCACCATTACTCCAGGCACTA 58.172 47.619 0.00 0.00 36.02 2.74
209 245 3.054434 TCACCATTCACCATTACTCCAGG 60.054 47.826 0.00 0.00 0.00 4.45
212 248 6.772716 ACATATTCACCATTCACCATTACTCC 59.227 38.462 0.00 0.00 0.00 3.85
213 249 7.498900 TCACATATTCACCATTCACCATTACTC 59.501 37.037 0.00 0.00 0.00 2.59
227 263 4.009675 TCCACAGCTTTCACATATTCACC 58.990 43.478 0.00 0.00 0.00 4.02
228 264 4.455533 TGTCCACAGCTTTCACATATTCAC 59.544 41.667 0.00 0.00 0.00 3.18
229 265 4.650734 TGTCCACAGCTTTCACATATTCA 58.349 39.130 0.00 0.00 0.00 2.57
230 266 5.449588 CCATGTCCACAGCTTTCACATATTC 60.450 44.000 0.00 0.00 0.00 1.75
231 267 4.400251 CCATGTCCACAGCTTTCACATATT 59.600 41.667 0.00 0.00 0.00 1.28
232 268 3.949754 CCATGTCCACAGCTTTCACATAT 59.050 43.478 0.00 0.00 0.00 1.78
233 269 3.244875 ACCATGTCCACAGCTTTCACATA 60.245 43.478 0.00 0.00 0.00 2.29
234 270 2.165167 CCATGTCCACAGCTTTCACAT 58.835 47.619 0.00 0.00 0.00 3.21
235 271 1.133823 ACCATGTCCACAGCTTTCACA 60.134 47.619 0.00 0.00 0.00 3.58
236 272 1.609208 ACCATGTCCACAGCTTTCAC 58.391 50.000 0.00 0.00 0.00 3.18
237 273 2.637382 TCTACCATGTCCACAGCTTTCA 59.363 45.455 0.00 0.00 0.00 2.69
238 274 3.265791 CTCTACCATGTCCACAGCTTTC 58.734 50.000 0.00 0.00 0.00 2.62
239 275 2.639839 ACTCTACCATGTCCACAGCTTT 59.360 45.455 0.00 0.00 0.00 3.51
263 299 4.716784 ACAGCCATAAGATGTCCACTAGAA 59.283 41.667 0.00 0.00 0.00 2.10
309 391 6.718522 TTTTTAAAGGAGGTTAACCCACAG 57.281 37.500 21.30 0.00 36.42 3.66
370 454 4.640771 TGACAATGAAGAAAGTAGCCCT 57.359 40.909 0.00 0.00 0.00 5.19
377 461 5.066375 TGTGAGGTGTTGACAATGAAGAAAG 59.934 40.000 0.00 0.00 0.00 2.62
380 464 4.129380 CTGTGAGGTGTTGACAATGAAGA 58.871 43.478 0.00 0.00 0.00 2.87
386 470 1.667236 CAGCTGTGAGGTGTTGACAA 58.333 50.000 5.25 0.00 38.80 3.18
396 480 0.254178 ATACTTGGCCCAGCTGTGAG 59.746 55.000 13.81 1.89 0.00 3.51
398 482 1.660560 GCATACTTGGCCCAGCTGTG 61.661 60.000 13.81 1.33 0.00 3.66
399 483 1.379044 GCATACTTGGCCCAGCTGT 60.379 57.895 13.81 0.00 0.00 4.40
408 528 3.390135 CCGTACATACTGGCATACTTGG 58.610 50.000 0.00 0.00 0.00 3.61
435 555 0.237235 GCGATGTTTGGCTTCGTTGA 59.763 50.000 0.00 0.00 43.81 3.18
444 564 1.517694 GCATGCCAGCGATGTTTGG 60.518 57.895 6.36 0.00 37.53 3.28
531 652 2.387757 AGGCAACATGGTCACAAAACT 58.612 42.857 0.00 0.00 41.41 2.66
541 662 3.443329 TGCACATTTAGTAGGCAACATGG 59.557 43.478 0.00 0.00 41.41 3.66
550 673 3.435327 TCGCCAAACTGCACATTTAGTAG 59.565 43.478 0.00 0.00 0.00 2.57
554 677 1.950216 TGTCGCCAAACTGCACATTTA 59.050 42.857 0.00 0.00 0.00 1.40
564 687 2.412325 CCTACGAAACATGTCGCCAAAC 60.412 50.000 0.00 0.00 45.00 2.93
570 693 4.433805 GCACTTTACCTACGAAACATGTCG 60.434 45.833 0.00 1.40 46.54 4.35
579 702 2.162208 CCTACGTGCACTTTACCTACGA 59.838 50.000 16.19 0.00 38.08 3.43
580 703 2.523015 CCTACGTGCACTTTACCTACG 58.477 52.381 16.19 0.08 40.30 3.51
581 704 2.417787 CCCCTACGTGCACTTTACCTAC 60.418 54.545 16.19 0.00 0.00 3.18
582 705 1.826720 CCCCTACGTGCACTTTACCTA 59.173 52.381 16.19 0.00 0.00 3.08
583 706 0.611714 CCCCTACGTGCACTTTACCT 59.388 55.000 16.19 0.00 0.00 3.08
585 708 1.274447 ACTCCCCTACGTGCACTTTAC 59.726 52.381 16.19 0.00 0.00 2.01
586 709 1.636148 ACTCCCCTACGTGCACTTTA 58.364 50.000 16.19 5.09 0.00 1.85
587 710 0.763035 AACTCCCCTACGTGCACTTT 59.237 50.000 16.19 4.04 0.00 2.66
588 711 0.763035 AAACTCCCCTACGTGCACTT 59.237 50.000 16.19 8.40 0.00 3.16
589 712 0.763035 AAAACTCCCCTACGTGCACT 59.237 50.000 16.19 4.64 0.00 4.40
590 713 0.872388 CAAAACTCCCCTACGTGCAC 59.128 55.000 6.82 6.82 0.00 4.57
591 714 0.887387 GCAAAACTCCCCTACGTGCA 60.887 55.000 0.00 0.00 0.00 4.57
592 715 1.873863 GCAAAACTCCCCTACGTGC 59.126 57.895 0.00 0.00 0.00 5.34
594 717 1.670083 GCGCAAAACTCCCCTACGT 60.670 57.895 0.30 0.00 0.00 3.57
595 718 1.024579 ATGCGCAAAACTCCCCTACG 61.025 55.000 17.11 0.00 0.00 3.51
596 719 2.032680 TATGCGCAAAACTCCCCTAC 57.967 50.000 17.11 0.00 0.00 3.18
597 720 2.639065 CTTATGCGCAAAACTCCCCTA 58.361 47.619 17.11 0.00 0.00 3.53
598 721 1.463674 CTTATGCGCAAAACTCCCCT 58.536 50.000 17.11 0.00 0.00 4.79
599 722 0.179137 GCTTATGCGCAAAACTCCCC 60.179 55.000 17.11 0.00 0.00 4.81
601 724 0.811281 AGGCTTATGCGCAAAACTCC 59.189 50.000 17.11 12.53 40.82 3.85
602 725 3.065371 ACATAGGCTTATGCGCAAAACTC 59.935 43.478 17.11 4.59 40.30 3.01
603 726 3.016736 ACATAGGCTTATGCGCAAAACT 58.983 40.909 17.11 11.34 40.30 2.66
604 727 3.181501 TGACATAGGCTTATGCGCAAAAC 60.182 43.478 17.11 4.08 40.30 2.43
608 731 1.138859 ACTGACATAGGCTTATGCGCA 59.861 47.619 14.96 14.96 40.30 6.09
610 733 4.505313 TCTACTGACATAGGCTTATGCG 57.495 45.455 15.25 7.18 40.30 4.73
647 1012 2.697751 CTCATCAACTACTCCCTCTGGG 59.302 54.545 0.00 0.00 46.11 4.45
650 1015 3.767309 ACCTCATCAACTACTCCCTCT 57.233 47.619 0.00 0.00 0.00 3.69
651 1016 3.769844 TGAACCTCATCAACTACTCCCTC 59.230 47.826 0.00 0.00 0.00 4.30
652 1017 3.791320 TGAACCTCATCAACTACTCCCT 58.209 45.455 0.00 0.00 0.00 4.20
653 1018 4.553330 TTGAACCTCATCAACTACTCCC 57.447 45.455 0.00 0.00 34.50 4.30
654 1019 5.409826 CACTTTGAACCTCATCAACTACTCC 59.590 44.000 0.00 0.00 38.95 3.85
655 1020 6.146347 GTCACTTTGAACCTCATCAACTACTC 59.854 42.308 0.00 0.00 38.95 2.59
656 1021 5.992217 GTCACTTTGAACCTCATCAACTACT 59.008 40.000 0.00 0.00 38.95 2.57
657 1022 5.107453 CGTCACTTTGAACCTCATCAACTAC 60.107 44.000 0.00 0.00 38.95 2.73
658 1023 4.988540 CGTCACTTTGAACCTCATCAACTA 59.011 41.667 0.00 0.00 38.95 2.24
659 1024 3.809832 CGTCACTTTGAACCTCATCAACT 59.190 43.478 0.00 0.00 38.95 3.16
683 1081 0.737019 CATGCGTTGGTGCCATTTCC 60.737 55.000 0.00 0.00 0.00 3.13
691 1089 3.055591 TGCAAAATAACATGCGTTGGTG 58.944 40.909 0.00 0.00 45.47 4.17
759 1158 2.001357 CGATCAGACACACATGGCG 58.999 57.895 0.00 0.00 39.76 5.69
797 1196 2.113139 CCGGCCGGGCATAAATCT 59.887 61.111 37.42 0.00 0.00 2.40
883 1291 9.313118 CTGTGTAAGCAAATCCGCATATATATA 57.687 33.333 0.00 0.00 0.00 0.86
884 1292 8.201554 CTGTGTAAGCAAATCCGCATATATAT 57.798 34.615 0.00 0.00 0.00 0.86
900 1308 3.752528 GCTCGTGCATGCTGTGTAAGC 62.753 57.143 20.33 14.38 45.15 3.09
901 1309 0.095935 GCTCGTGCATGCTGTGTAAG 59.904 55.000 20.33 8.70 39.41 2.34
902 1310 1.298157 GGCTCGTGCATGCTGTGTAA 61.298 55.000 20.33 0.00 41.91 2.41
903 1311 1.741401 GGCTCGTGCATGCTGTGTA 60.741 57.895 20.33 0.00 41.91 2.90
904 1312 3.052082 GGCTCGTGCATGCTGTGT 61.052 61.111 20.33 0.00 41.91 3.72
905 1313 4.156622 CGGCTCGTGCATGCTGTG 62.157 66.667 20.33 12.94 41.91 3.66
906 1314 4.377708 TCGGCTCGTGCATGCTGT 62.378 61.111 20.33 0.00 41.91 4.40
926 1334 2.030363 CCAGTAGCTAGCTGATCGAAGG 60.030 54.545 27.68 14.24 36.12 3.46
956 1364 3.141398 TGCCTGCTATATGTGCTTAAGC 58.859 45.455 20.84 20.84 42.50 3.09
957 1365 5.059161 TCTTGCCTGCTATATGTGCTTAAG 58.941 41.667 0.00 0.00 0.00 1.85
958 1366 5.034852 TCTTGCCTGCTATATGTGCTTAA 57.965 39.130 4.57 0.00 0.00 1.85
959 1367 4.101585 ACTCTTGCCTGCTATATGTGCTTA 59.898 41.667 4.57 0.00 0.00 3.09
960 1368 3.118112 ACTCTTGCCTGCTATATGTGCTT 60.118 43.478 4.57 0.00 0.00 3.91
961 1369 2.437281 ACTCTTGCCTGCTATATGTGCT 59.563 45.455 4.57 0.00 0.00 4.40
962 1370 2.843701 ACTCTTGCCTGCTATATGTGC 58.156 47.619 0.00 0.00 0.00 4.57
963 1371 4.808077 CAACTCTTGCCTGCTATATGTG 57.192 45.455 0.00 0.00 0.00 3.21
1033 1464 1.805945 GGAGAAACGTCGCGAGCAT 60.806 57.895 10.24 0.00 0.00 3.79
1323 1781 3.087781 GTCGTAGAAGTAGAACCCCTGT 58.912 50.000 0.00 0.00 39.69 4.00
1687 2162 4.099170 CGGCAGCAGCTTCAGCAC 62.099 66.667 2.86 0.00 45.16 4.40
1712 2187 0.248417 GCAACGCACATCACAACACA 60.248 50.000 0.00 0.00 0.00 3.72
1716 2191 0.667453 ACATGCAACGCACATCACAA 59.333 45.000 0.00 0.00 43.04 3.33
1735 2210 1.000612 ATCCACATGCATGCCCACA 59.999 52.632 26.53 6.73 0.00 4.17
1740 2215 0.248336 CACACGATCCACATGCATGC 60.248 55.000 26.53 11.82 0.00 4.06
1741 2216 1.063027 GACACACGATCCACATGCATG 59.937 52.381 25.09 25.09 0.00 4.06
1742 2217 1.338960 TGACACACGATCCACATGCAT 60.339 47.619 0.00 0.00 0.00 3.96
1743 2218 0.034616 TGACACACGATCCACATGCA 59.965 50.000 0.00 0.00 0.00 3.96
1811 2286 8.391106 GCAAAGTGAGTCTTTATATAACACAGG 58.609 37.037 12.89 5.69 43.57 4.00
1826 2301 6.363357 GGTTGTTATCATTTGCAAAGTGAGTC 59.637 38.462 18.19 13.71 45.94 3.36
1861 2336 1.068921 TGCGTGCACTTCTACAGCA 59.931 52.632 16.19 12.14 35.63 4.41
1882 2357 1.607801 GGCTTTTGGGTGATCTGGCC 61.608 60.000 0.00 0.00 0.00 5.36
1885 2360 3.749665 TTTTGGCTTTTGGGTGATCTG 57.250 42.857 0.00 0.00 0.00 2.90
1907 2382 6.267471 TGGAAGGCATGTTATCAACTCTTTTT 59.733 34.615 0.00 0.00 0.00 1.94
1908 2383 5.774690 TGGAAGGCATGTTATCAACTCTTTT 59.225 36.000 0.00 0.00 0.00 2.27
1909 2384 5.183904 GTGGAAGGCATGTTATCAACTCTTT 59.816 40.000 0.00 0.00 0.00 2.52
1910 2385 4.702131 GTGGAAGGCATGTTATCAACTCTT 59.298 41.667 0.00 0.00 0.00 2.85
1911 2386 4.265073 GTGGAAGGCATGTTATCAACTCT 58.735 43.478 0.00 0.00 0.00 3.24
1912 2387 3.378427 GGTGGAAGGCATGTTATCAACTC 59.622 47.826 0.00 0.00 0.00 3.01
1913 2388 3.245229 TGGTGGAAGGCATGTTATCAACT 60.245 43.478 0.00 0.00 0.00 3.16
1914 2389 3.088532 TGGTGGAAGGCATGTTATCAAC 58.911 45.455 0.00 0.00 0.00 3.18
1915 2390 3.448093 TGGTGGAAGGCATGTTATCAA 57.552 42.857 0.00 0.00 0.00 2.57
1916 2391 3.289836 CATGGTGGAAGGCATGTTATCA 58.710 45.455 0.00 0.00 0.00 2.15
1917 2392 2.624838 CCATGGTGGAAGGCATGTTATC 59.375 50.000 2.57 0.00 40.96 1.75
1918 2393 2.669781 CCATGGTGGAAGGCATGTTAT 58.330 47.619 2.57 0.00 40.96 1.89
1919 2394 1.341877 CCCATGGTGGAAGGCATGTTA 60.342 52.381 11.73 0.00 40.96 2.41
1920 2395 0.615544 CCCATGGTGGAAGGCATGTT 60.616 55.000 11.73 0.00 40.96 2.71
1921 2396 1.000739 CCCATGGTGGAAGGCATGT 59.999 57.895 11.73 0.00 40.96 3.21
1922 2397 1.000739 ACCCATGGTGGAAGGCATG 59.999 57.895 11.73 0.00 40.96 4.06
1923 2398 3.524337 ACCCATGGTGGAAGGCAT 58.476 55.556 11.73 0.00 40.96 4.40
1935 2578 4.476846 TGGTTGGTACATAGATTCACCCAT 59.523 41.667 0.00 0.00 39.30 4.00
1946 2589 5.636123 AGTGTTGGAATTGGTTGGTACATA 58.364 37.500 0.00 0.00 39.30 2.29
1956 2599 3.004734 GTGAGGTGAAGTGTTGGAATTGG 59.995 47.826 0.00 0.00 0.00 3.16
1962 2605 1.202533 AGACGTGAGGTGAAGTGTTGG 60.203 52.381 0.00 0.00 0.00 3.77
1978 2621 3.305398 AGCACCAAAAGAGTCTAGACG 57.695 47.619 17.07 3.84 36.20 4.18
1981 2624 7.201652 GCCTAATTAAGCACCAAAAGAGTCTAG 60.202 40.741 1.02 0.00 0.00 2.43
1992 2635 6.247229 TGATCTTAGCCTAATTAAGCACCA 57.753 37.500 8.72 0.00 0.00 4.17
2002 2645 5.509163 GCGGTCTACATTGATCTTAGCCTAA 60.509 44.000 0.00 0.00 0.00 2.69
2003 2646 4.022242 GCGGTCTACATTGATCTTAGCCTA 60.022 45.833 0.00 0.00 0.00 3.93
2004 2647 3.243907 GCGGTCTACATTGATCTTAGCCT 60.244 47.826 0.00 0.00 0.00 4.58
2005 2648 3.060602 GCGGTCTACATTGATCTTAGCC 58.939 50.000 0.00 0.00 0.00 3.93
2009 2652 6.515272 AAAATTGCGGTCTACATTGATCTT 57.485 33.333 0.00 0.00 0.00 2.40
2032 2675 7.361201 GCTTATGTCTGTACTGATGCTCAAAAA 60.361 37.037 5.69 0.00 0.00 1.94
2038 2681 3.131223 ACGCTTATGTCTGTACTGATGCT 59.869 43.478 5.69 0.00 0.00 3.79
2039 2682 3.448686 ACGCTTATGTCTGTACTGATGC 58.551 45.455 5.69 5.48 0.00 3.91
2040 2683 5.102313 TGAACGCTTATGTCTGTACTGATG 58.898 41.667 5.69 0.00 0.00 3.07
2043 2686 7.860872 TGTATATGAACGCTTATGTCTGTACTG 59.139 37.037 0.00 0.00 0.00 2.74
2044 2687 7.861372 GTGTATATGAACGCTTATGTCTGTACT 59.139 37.037 0.00 0.00 0.00 2.73
2045 2688 7.149176 CGTGTATATGAACGCTTATGTCTGTAC 60.149 40.741 0.00 0.00 32.40 2.90
2046 2689 6.854381 CGTGTATATGAACGCTTATGTCTGTA 59.146 38.462 0.00 0.00 32.40 2.74
2047 2690 5.685954 CGTGTATATGAACGCTTATGTCTGT 59.314 40.000 0.00 0.00 32.40 3.41
2048 2691 5.685954 ACGTGTATATGAACGCTTATGTCTG 59.314 40.000 10.80 0.00 43.49 3.51
2049 2692 5.685954 CACGTGTATATGAACGCTTATGTCT 59.314 40.000 7.58 0.00 43.49 3.41
2050 2693 5.609696 GCACGTGTATATGAACGCTTATGTC 60.610 44.000 18.38 0.00 43.49 3.06
2051 2694 4.208460 GCACGTGTATATGAACGCTTATGT 59.792 41.667 18.38 0.00 43.49 2.29
2052 2695 4.208253 TGCACGTGTATATGAACGCTTATG 59.792 41.667 18.38 4.67 43.49 1.90
2053 2696 4.364860 TGCACGTGTATATGAACGCTTAT 58.635 39.130 18.38 0.00 43.49 1.73
2054 2697 3.771798 TGCACGTGTATATGAACGCTTA 58.228 40.909 18.38 0.00 43.49 3.09
2055 2698 2.612604 TGCACGTGTATATGAACGCTT 58.387 42.857 18.38 0.00 43.49 4.68
2056 2699 2.287393 TGCACGTGTATATGAACGCT 57.713 45.000 18.38 0.00 43.49 5.07
2058 2701 4.990004 GTGTATGCACGTGTATATGAACG 58.010 43.478 25.81 9.65 45.15 3.95
2071 2714 5.050769 CGTTCATAAGGATGAGTGTATGCAC 60.051 44.000 5.71 5.71 43.03 4.57
2072 2715 5.049828 CGTTCATAAGGATGAGTGTATGCA 58.950 41.667 0.00 0.00 43.03 3.96
2073 2716 4.084328 GCGTTCATAAGGATGAGTGTATGC 60.084 45.833 0.00 0.00 43.03 3.14
2074 2717 5.049828 TGCGTTCATAAGGATGAGTGTATG 58.950 41.667 0.00 0.00 43.03 2.39
2075 2718 5.050490 GTGCGTTCATAAGGATGAGTGTAT 58.950 41.667 0.00 0.00 43.03 2.29
2076 2719 4.081917 TGTGCGTTCATAAGGATGAGTGTA 60.082 41.667 0.00 0.00 43.03 2.90
2077 2720 3.262420 GTGCGTTCATAAGGATGAGTGT 58.738 45.455 0.00 0.00 43.03 3.55
2078 2721 3.062639 GTGTGCGTTCATAAGGATGAGTG 59.937 47.826 0.00 0.00 43.03 3.51
2079 2722 3.262420 GTGTGCGTTCATAAGGATGAGT 58.738 45.455 0.00 0.00 43.03 3.41
2083 2726 1.999735 CGTGTGTGCGTTCATAAGGAT 59.000 47.619 0.00 0.00 0.00 3.24
2084 2727 1.424403 CGTGTGTGCGTTCATAAGGA 58.576 50.000 0.00 0.00 0.00 3.36
2085 2728 0.179225 GCGTGTGTGCGTTCATAAGG 60.179 55.000 0.00 0.00 0.00 2.69
2086 2729 0.510790 TGCGTGTGTGCGTTCATAAG 59.489 50.000 0.00 0.00 37.81 1.73
2089 2732 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
2090 2733 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
2091 2734 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
2096 2739 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
2097 2740 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
2098 2741 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
2099 2742 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
2100 2743 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
2101 2744 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
2102 2745 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
2103 2746 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
2104 2747 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
2105 2748 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
2106 2749 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
2107 2750 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
2108 2751 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
2109 2752 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
2110 2753 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
2111 2754 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
2112 2755 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
2113 2756 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
2114 2757 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
2115 2758 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
2116 2759 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
2117 2760 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
2118 2761 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
2119 2762 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
2120 2763 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
2121 2764 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
2122 2765 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
2123 2766 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
2124 2767 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
2125 2768 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
2126 2769 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
2127 2770 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
2128 2771 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
2129 2772 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
2130 2773 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
2131 2774 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
2132 2775 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
2133 2776 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
2134 2777 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2135 2778 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2136 2779 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2137 2780 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2138 2781 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
2139 2782 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
2140 2783 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
2141 2784 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
2142 2785 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
2143 2786 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
2144 2787 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
2145 2788 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
2146 2789 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
2147 2790 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
2148 2791 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
2149 2792 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
2150 2793 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
2151 2794 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
2152 2795 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
2153 2796 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
2154 2797 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
2155 2798 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
2156 2799 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
2157 2800 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
2158 2801 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
2159 2802 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
2160 2803 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
2161 2804 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
2162 2805 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
2163 2806 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
2164 2807 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
2165 2808 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
2168 2811 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
2170 2813 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
2173 2816 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
2193 2836 0.961358 AGTGGGAGGAGACGTTCTCG 60.961 60.000 0.00 0.00 44.28 4.04
2194 2837 0.528470 CAGTGGGAGGAGACGTTCTC 59.472 60.000 0.00 0.00 42.66 2.87
2195 2838 0.112606 TCAGTGGGAGGAGACGTTCT 59.887 55.000 0.00 0.00 0.00 3.01
2196 2839 0.528470 CTCAGTGGGAGGAGACGTTC 59.472 60.000 0.00 0.00 40.13 3.95
2197 2840 1.536943 GCTCAGTGGGAGGAGACGTT 61.537 60.000 0.00 0.00 44.22 3.99
2198 2841 1.979693 GCTCAGTGGGAGGAGACGT 60.980 63.158 0.00 0.00 44.22 4.34
2199 2842 0.394488 TAGCTCAGTGGGAGGAGACG 60.394 60.000 0.00 0.00 44.22 4.18
2200 2843 2.080654 ATAGCTCAGTGGGAGGAGAC 57.919 55.000 0.00 0.00 44.22 3.36
2201 2844 2.856760 AATAGCTCAGTGGGAGGAGA 57.143 50.000 0.00 0.00 44.22 3.71
2202 2845 3.739519 CGAAAATAGCTCAGTGGGAGGAG 60.740 52.174 0.00 0.00 44.22 3.69
2203 2846 2.168521 CGAAAATAGCTCAGTGGGAGGA 59.831 50.000 0.00 0.00 44.22 3.71
2204 2847 2.555199 CGAAAATAGCTCAGTGGGAGG 58.445 52.381 0.00 0.00 44.22 4.30
2205 2848 1.936547 GCGAAAATAGCTCAGTGGGAG 59.063 52.381 0.00 0.00 46.93 4.30
2206 2849 1.555075 AGCGAAAATAGCTCAGTGGGA 59.445 47.619 0.00 0.00 41.83 4.37
2207 2850 2.029838 AGCGAAAATAGCTCAGTGGG 57.970 50.000 0.00 0.00 41.83 4.61
2208 2851 4.425577 AAAAGCGAAAATAGCTCAGTGG 57.574 40.909 0.00 0.00 45.31 4.00
2209 2852 5.693814 AGAAAAAGCGAAAATAGCTCAGTG 58.306 37.500 0.00 0.00 45.31 3.66
2223 2866 7.949186 ACTCAAACTTTTTGTTAGAAAAAGCG 58.051 30.769 21.86 13.43 45.98 4.68
2274 2917 2.632512 GGAGCTAGGAAGGATGGAAGAG 59.367 54.545 0.00 0.00 0.00 2.85
2327 2971 7.508296 AGACTTTTCTGGTAACTAGTTGGAGTA 59.492 37.037 18.56 2.54 37.61 2.59
2331 2975 8.897872 TTTAGACTTTTCTGGTAACTAGTTGG 57.102 34.615 18.56 5.98 32.75 3.77
2345 2989 9.561270 GCTCTTGTCCATAAATTTAGACTTTTC 57.439 33.333 14.97 2.69 0.00 2.29
2359 3003 2.975732 CAGCTCTGCTCTTGTCCATA 57.024 50.000 0.00 0.00 36.40 2.74
2378 3022 1.153784 CAATCAACACATGGGGCGC 60.154 57.895 0.00 0.00 0.00 6.53
2379 3023 0.171007 GACAATCAACACATGGGGCG 59.829 55.000 0.00 0.00 0.00 6.13
2408 3052 1.896220 TGTGGCTCAAGCTTAACCTG 58.104 50.000 0.00 0.00 41.70 4.00
2448 3213 5.552178 ACAAGACCTCAAGATCAAGGTAAC 58.448 41.667 12.80 4.27 45.93 2.50
2462 3227 5.659440 AGAAGAGAAGATGACAAGACCTC 57.341 43.478 0.00 0.00 0.00 3.85
2463 3228 5.779771 AGAAGAAGAGAAGATGACAAGACCT 59.220 40.000 0.00 0.00 0.00 3.85
2464 3229 6.036577 AGAAGAAGAGAAGATGACAAGACC 57.963 41.667 0.00 0.00 0.00 3.85
2465 3230 6.589907 GGAAGAAGAAGAGAAGATGACAAGAC 59.410 42.308 0.00 0.00 0.00 3.01
2466 3231 6.496565 AGGAAGAAGAAGAGAAGATGACAAGA 59.503 38.462 0.00 0.00 0.00 3.02
2467 3232 6.700352 AGGAAGAAGAAGAGAAGATGACAAG 58.300 40.000 0.00 0.00 0.00 3.16
2468 3233 6.678568 AGGAAGAAGAAGAGAAGATGACAA 57.321 37.500 0.00 0.00 0.00 3.18
2469 3234 6.496565 AGAAGGAAGAAGAAGAGAAGATGACA 59.503 38.462 0.00 0.00 0.00 3.58
2470 3235 6.935167 AGAAGGAAGAAGAAGAGAAGATGAC 58.065 40.000 0.00 0.00 0.00 3.06
2471 3236 6.154363 GGAGAAGGAAGAAGAAGAGAAGATGA 59.846 42.308 0.00 0.00 0.00 2.92
2472 3237 6.155049 AGGAGAAGGAAGAAGAAGAGAAGATG 59.845 42.308 0.00 0.00 0.00 2.90
2473 3238 6.263754 AGGAGAAGGAAGAAGAAGAGAAGAT 58.736 40.000 0.00 0.00 0.00 2.40
2474 3239 5.650283 AGGAGAAGGAAGAAGAAGAGAAGA 58.350 41.667 0.00 0.00 0.00 2.87
2475 3240 6.211384 AGAAGGAGAAGGAAGAAGAAGAGAAG 59.789 42.308 0.00 0.00 0.00 2.85
2476 3241 6.081356 AGAAGGAGAAGGAAGAAGAAGAGAA 58.919 40.000 0.00 0.00 0.00 2.87
2477 3242 5.650283 AGAAGGAGAAGGAAGAAGAAGAGA 58.350 41.667 0.00 0.00 0.00 3.10
2478 3243 6.889722 TCTAGAAGGAGAAGGAAGAAGAAGAG 59.110 42.308 0.00 0.00 0.00 2.85
2479 3244 6.795590 TCTAGAAGGAGAAGGAAGAAGAAGA 58.204 40.000 0.00 0.00 0.00 2.87
2480 3245 7.561356 AGATCTAGAAGGAGAAGGAAGAAGAAG 59.439 40.741 0.00 0.00 0.00 2.85
2481 3246 7.418378 AGATCTAGAAGGAGAAGGAAGAAGAA 58.582 38.462 0.00 0.00 0.00 2.52
2482 3247 6.980577 AGATCTAGAAGGAGAAGGAAGAAGA 58.019 40.000 0.00 0.00 0.00 2.87
2483 3248 7.660030 AAGATCTAGAAGGAGAAGGAAGAAG 57.340 40.000 0.00 0.00 0.00 2.85
2484 3249 9.722317 ATTAAGATCTAGAAGGAGAAGGAAGAA 57.278 33.333 0.00 0.00 0.00 2.52
2501 3266 9.553064 GACCAAACAGACATCATATTAAGATCT 57.447 33.333 0.00 0.00 0.00 2.75
2502 3267 8.778358 GGACCAAACAGACATCATATTAAGATC 58.222 37.037 0.00 0.00 0.00 2.75
2503 3268 8.497745 AGGACCAAACAGACATCATATTAAGAT 58.502 33.333 0.00 0.00 0.00 2.40
2504 3269 7.861629 AGGACCAAACAGACATCATATTAAGA 58.138 34.615 0.00 0.00 0.00 2.10
2505 3270 8.511604 AAGGACCAAACAGACATCATATTAAG 57.488 34.615 0.00 0.00 0.00 1.85
2506 3271 7.556275 GGAAGGACCAAACAGACATCATATTAA 59.444 37.037 0.00 0.00 38.79 1.40
2507 3272 7.054124 GGAAGGACCAAACAGACATCATATTA 58.946 38.462 0.00 0.00 38.79 0.98
2508 3273 5.888161 GGAAGGACCAAACAGACATCATATT 59.112 40.000 0.00 0.00 38.79 1.28
2509 3274 5.440610 GGAAGGACCAAACAGACATCATAT 58.559 41.667 0.00 0.00 38.79 1.78
2510 3275 4.324254 GGGAAGGACCAAACAGACATCATA 60.324 45.833 0.00 0.00 41.20 2.15
2511 3276 3.562176 GGGAAGGACCAAACAGACATCAT 60.562 47.826 0.00 0.00 41.20 2.45
2512 3277 2.224769 GGGAAGGACCAAACAGACATCA 60.225 50.000 0.00 0.00 41.20 3.07
2513 3278 2.224769 TGGGAAGGACCAAACAGACATC 60.225 50.000 0.00 0.00 41.20 3.06
2514 3279 1.780309 TGGGAAGGACCAAACAGACAT 59.220 47.619 0.00 0.00 41.20 3.06
2515 3280 1.217916 TGGGAAGGACCAAACAGACA 58.782 50.000 0.00 0.00 41.20 3.41
2516 3281 2.358322 TTGGGAAGGACCAAACAGAC 57.642 50.000 0.00 0.00 46.95 3.51
2523 3288 0.039618 GAAGGCATTGGGAAGGACCA 59.960 55.000 0.00 0.00 41.20 4.02
2524 3289 0.039618 TGAAGGCATTGGGAAGGACC 59.960 55.000 0.00 0.00 38.08 4.46
2525 3290 1.272147 ACTGAAGGCATTGGGAAGGAC 60.272 52.381 0.00 0.00 0.00 3.85
2526 3291 1.075601 ACTGAAGGCATTGGGAAGGA 58.924 50.000 0.00 0.00 0.00 3.36
2527 3292 1.180029 CACTGAAGGCATTGGGAAGG 58.820 55.000 0.00 0.00 0.00 3.46
2528 3293 0.529378 GCACTGAAGGCATTGGGAAG 59.471 55.000 0.00 0.00 0.00 3.46
2529 3294 0.112995 AGCACTGAAGGCATTGGGAA 59.887 50.000 0.00 0.00 0.00 3.97
2530 3295 0.112995 AAGCACTGAAGGCATTGGGA 59.887 50.000 0.00 0.00 0.00 4.37
2531 3296 0.245539 CAAGCACTGAAGGCATTGGG 59.754 55.000 0.00 0.00 0.00 4.12
2532 3297 0.389426 GCAAGCACTGAAGGCATTGG 60.389 55.000 0.00 0.00 0.00 3.16
2533 3298 0.601558 AGCAAGCACTGAAGGCATTG 59.398 50.000 0.00 0.00 0.00 2.82
2534 3299 0.886563 GAGCAAGCACTGAAGGCATT 59.113 50.000 0.00 0.00 0.00 3.56
2535 3300 0.037877 AGAGCAAGCACTGAAGGCAT 59.962 50.000 0.00 0.00 0.00 4.40
2536 3301 0.887836 CAGAGCAAGCACTGAAGGCA 60.888 55.000 13.18 0.00 36.90 4.75
2537 3302 0.604780 TCAGAGCAAGCACTGAAGGC 60.605 55.000 17.70 0.00 39.87 4.35
2538 3303 2.008329 GATCAGAGCAAGCACTGAAGG 58.992 52.381 22.38 0.00 44.28 3.46
2539 3304 2.008329 GGATCAGAGCAAGCACTGAAG 58.992 52.381 22.38 0.00 44.28 3.02
2540 3305 1.627329 AGGATCAGAGCAAGCACTGAA 59.373 47.619 22.38 9.37 44.28 3.02
2541 3306 1.066358 CAGGATCAGAGCAAGCACTGA 60.066 52.381 21.18 21.18 44.94 3.41
2542 3307 1.066358 TCAGGATCAGAGCAAGCACTG 60.066 52.381 12.40 12.40 36.27 3.66
2543 3308 1.207570 CTCAGGATCAGAGCAAGCACT 59.792 52.381 0.00 0.00 0.00 4.40
2544 3309 1.654317 CTCAGGATCAGAGCAAGCAC 58.346 55.000 0.00 0.00 0.00 4.40
2551 3316 0.469070 CCCCAAGCTCAGGATCAGAG 59.531 60.000 6.73 9.41 36.21 3.35
2552 3317 0.252881 ACCCCAAGCTCAGGATCAGA 60.253 55.000 6.73 0.00 0.00 3.27
2553 3318 0.179936 GACCCCAAGCTCAGGATCAG 59.820 60.000 6.73 0.00 0.00 2.90
2554 3319 1.617018 CGACCCCAAGCTCAGGATCA 61.617 60.000 6.73 0.00 0.00 2.92
2555 3320 1.144936 CGACCCCAAGCTCAGGATC 59.855 63.158 6.73 0.00 0.00 3.36
2556 3321 1.306141 TCGACCCCAAGCTCAGGAT 60.306 57.895 6.73 0.00 0.00 3.24
2557 3322 1.984570 CTCGACCCCAAGCTCAGGA 60.985 63.158 6.73 0.00 0.00 3.86
2558 3323 2.581354 CTCGACCCCAAGCTCAGG 59.419 66.667 0.00 0.00 0.00 3.86
2559 3324 2.125350 GCTCGACCCCAAGCTCAG 60.125 66.667 0.00 0.00 35.60 3.35
2560 3325 2.604686 AGCTCGACCCCAAGCTCA 60.605 61.111 0.00 0.00 45.57 4.26
2563 3328 1.743252 CTCAAGCTCGACCCCAAGC 60.743 63.158 0.00 0.00 38.84 4.01
2564 3329 0.671781 CACTCAAGCTCGACCCCAAG 60.672 60.000 0.00 0.00 0.00 3.61
2565 3330 1.118965 TCACTCAAGCTCGACCCCAA 61.119 55.000 0.00 0.00 0.00 4.12
2566 3331 1.533033 TCACTCAAGCTCGACCCCA 60.533 57.895 0.00 0.00 0.00 4.96
2567 3332 1.216710 CTCACTCAAGCTCGACCCC 59.783 63.158 0.00 0.00 0.00 4.95
2568 3333 1.216710 CCTCACTCAAGCTCGACCC 59.783 63.158 0.00 0.00 0.00 4.46
2569 3334 1.216710 CCCTCACTCAAGCTCGACC 59.783 63.158 0.00 0.00 0.00 4.79
2570 3335 0.389166 CACCCTCACTCAAGCTCGAC 60.389 60.000 0.00 0.00 0.00 4.20
2571 3336 0.539669 TCACCCTCACTCAAGCTCGA 60.540 55.000 0.00 0.00 0.00 4.04
2572 3337 1.967535 TCACCCTCACTCAAGCTCG 59.032 57.895 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.