>input_sequence_74887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ATGCAAGGCCTCGCGGCATCTTCAA
GGGCC---------------GTCATGCTCGCGACGTTTCTCCTGATCGGTTTCGGCGTC------------GCCGCCGCC
GCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGATGACGCTCTACTACCACGACATCCT
CCACGACGGCGCCAACAACACGGCCAACGCGACGTCAGCGGCCGCGACGAGCCCGCCGGCGCT---------------GA
GCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGATGACCCGGTGACGGTGGGGCAGGCGCTGCCCGCCGGGGCCGAG
GAGGAGCCCGCGGCGCGCGCACAGGGGTTCTACTTCTACGACGGGAAGGGGTCCTTCAACGCGTGGTTCGCCTTCTCGCT
CGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAATCTCATGGGCGCCGACCTCATGGGCGAGGAGACGCGGGACATCT
CCGTCGTCGGCGGCACCGGCGATTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGCACCGACGCCGTCGAGGGGTTGCTC
TACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G151500
CTTCCACGGAAGCCCAGCCCAGCCCGAAAAGCCGCAGGTTTTGATGGAGGGATCAAC-----GCACTGTGATCAAGTGCA
TGCTTTTGTTGTTTCTTGACCCGATTGGTCCTGCCGTGTATCACCGCCGTTGTAAA-------------------TGTAT
GGTAGCACCGTCCGCA-----------TTGCCTTGTTGTATTTTGGATAGCAGTAGTATATGTGAGAGTATTGCCATCTT
AGTGCCTGGAGTAATGGTGAATGGTGAATATGTGAAAGCTGTGGACATGGTAGAGTTTT---------------------
-------------------------TCTAGTGGACATCTTATGGCTGTGTGCATCGCAATAATGCAGAGGCTGTGGGTTA
ACCTCCTTTAAAAAAACAATGCATTTTTTTAGGGAAAAA--CAATGCATTGTTAGGGCTACTTTCTTCATTGTCAACACC
TCAC------------------------------------AGCTGGGCCAAGTATGCCAGTATGTACGGCCAAATCAACG
AAGCCAAACATCGCTGGCATGCCAAGTCACAGTCGAGTGTTACTGACGAGTAAATATCATTAAACTTTTCTCTTAG-AAG
AGTAGTGTTGTAGTTTTGTGAC--CATGTTGCCTACTAAATGTGCAGTTTGGCGACATGTTTCGTAGGTAAAGTGCACGT
AGGGGAGTTTTGCGCATAAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CCTATGTCAGTAGAAAAATAAATAGTACTCCCAGAGGGAGTA----------------
-----------------GTTGATGAGGTTCAAAGTGACGCGGAAATGGCACCAACGC-ATGTTATTTTGCACAAGTTTTC
ACAGCATGGTGCTGGAACAACGACACTATACCAACCACGCCATGTGTGTCTGATCGCTACCGTTACTTTTCACTCAGATT
TATGCCCGGCCGGCCGGC---CCCCTTTTACCGGGTCGGTCCTTTTCACCGAA---CCAACCCCAC---TAGTATTGTCT
GCTCCACGCCTATATATATGCGGATTTGCTTACACAGCATGCACGAGCCGAGCCCTTCGATCAGCTAGCTACTGGCACTG
CCTGCTTAAGCACATATAGCAGGCAAGAGTTGCACCGATCGACG--------ACAATGCAAGGCCTCGCGGCATCTTCAA
GGGCC---------------GTCATGCTCGCGACGTTTCTCCTGATCGGTTTCGGCGTC------------GCCGCCGCC
GCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGATGACGCTCTACTACCACGACATCCT
CCACGACGGCGCCAACAACACGGCCAACGCGACGTCAGCGGCCGCGACGAGCCCGCCGGCGCT---------------GA
GCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGATGACCCGGTGACGGTGGGGCAGGCGCTGCCCGCCGGGGCCGAG
GAGGAGCCCGCGGCGCGCGCACAGGGGTTCTACTTCTACGACGGGAAGGGGTCCTTCAACGCGTGGTTCGCCTTCTCGCT
CGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAATCTCATGGGCGCCGACCTCATGGGCGAGGAGACGCGGGACATCT
CCGTCGTCGGCGGCACCGGCGATTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGCACCGACGCCGTCGAGGGGTTGCTC
TACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGGCTCCGAATATCACCTGATGAGATCATGGGA
TGCCGTAGGGAGGTGGTGGGATTAATATGCTA----------GTGCCGAACTGCCGATTA-------GGAGTGATGCATG
TGTGCTGAAGCTGCTGCCGATGTGTTTGTGTTGTGATGTGCGTTGCATGTGTGGGCATGCATGTGGATCGTGTGTCATTG
TCGTGTTATACGCCAATACGAGTGTAAAATGTACCGCACCTTTATCCTGTGTTATATAAAGACTCACTTTGCAAATGATA
ACAACCCTAGCTCATTGCTGTAGAAGTGCACGCACCGGCCAGATCACCCAAAAGCCAAAAAAAAAAGAGTTGATAACAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GCCTTCCACCATGGGTGAATCTATGTACCAACCAATTCCAACACTTCACCTCACGTCTAGACTCTTTTGGTGC
TTAATTAGGCTAAGATCAATGTAGACCGCAATTTTTTTTGAGCATCAGTACAGACATAAGCGTTCATATACACGTGCATA
CACTCATCCTTATGAACGCACACACGCACACCCTACCCCTATGAGCACCTCCGAGAGACTGAGCCGGCATATCATCTTGA
GATTTACGAAGTCACCGTAGGCGCCTCGTCGTCGACGAGAACGTCTCCTCCCACTGAGCTATTTTCGCTTTTTCTAACAA
AAAGTTTGAGTAGTGAAGTGAAAAGAGGGTAAAGATCTCTTCCATCCTTCCTAGCTCCTTGTGCTTGCACCCTCTTGACG
CT-TTTTTCATACTCCAACTAGTTACCAGAAAAGTCTAAATTTATGGACAAGAGCAGAGCTGCGCCCCATGTGTTGATTG
TCAGGATCAACCAGGTTAAG------------------------------------------------------------
-------------------------------------------------------------CTTGAGCCACATAGAAATG
AGAAGATGGACAGTTACCTTGATCTTGAGGTCTTGTCATCTTCTCTTCTTCTTCCTTCTCCTTCTAGATCTTAATATGAT
GTCTGTTTGGTCCTTCCCAATGCCTTCAGTGCTTGCTCTGATCCTGAGCTTGGGGTCGAGCTTGAGTGAGGGTGA
>chr2D_1
CTTCCACGGAAACCCAGCCCAGCCCGAAAAGCCGCAGGTTTTGACGGAGGGATCAACGTGTCGCAGTGTGATCAAGCGCA
TGCTTTTGTTGTTTCTTGACAGGATTGGTCCTGCCGTGTATCACCGTCGTAAACAAATGCGGTGCCTGGTTAGTCTGTAT
GGCAGCACCGGCCGTGATCGGGCAGTGTTGCCTTGTTGTAGTTTGGATATCAGTAGTATGTGAGAGTAT-TTACCATCTC
AGTGACTCTAGTAATGGTGAATATGTGCG------AAGCTGTGGACATGGTAGAGTTTCACTAGTAATATTAGATGACAA
TGAGAATATTCATGCTTCATTGTTCTCTAGTGGACATCTTATGGCTGTGTGCATCGCAATAATGCAGAGGTCGGGGGTTA
ACCTCCTTTT-----------CAATTTTTTATAAAAAATATCAATGCATTGTTGGGGCTATTTGCTTCACTGTCAACACT
TGCCTTTCTAAAGCTGGGGCAAGTATTTTTATTCTTCTAAAGCTGGTGCAAGTATGCCAGTATGTACGGCCAAACCAACT
TAGACAAATATTGCTGGCATGCCAAGTCACAGTCGAGTGTTACTGACGAGTAAATATCATTAAACTTTTATCTTAGAAAG
AGTAGTGTTGTTGTTTTGTGATATCATGTTGCGTACAAAATGTGCATTTTGGTGACATGTTCAAGCGCATCTAGTCGGAG
TTGTTCATTTGGGGCGGGACGTAAGAGGGATGGCTAGGGCGACGGCTAGCACCGTGATGGGAGGAGGTCCAGGAGAGGCT
GGGGTGGCAAGGCCGCCGGCCGCGAGGGCTAGAGAGGCGGTTACAACTAGGTAGGCCGCGGGAGAGGACGAAGAAGATGA
ACAGGTGGCGGCGCATTCCTGACCGTTGGATATTGACCTGATGACCATAAATAGAAGTGACCGGCATGAATTGTTTTTGC
AGGTATCTGACGTATGGGTGCTCCCATGTCAGTGACAAAAATAGTATTCCATCCGTCCCATAATATAAGAGCATTTTTTA
CACTAGAGAGAGTAGTTGTTGATGAGGTTCAAAGTGACGCTGAAATGGTACCAACGCCATGTTATTTTGCACAAGTTTTC
ACAGCATGGTGCTGGAACAACGACAGTGTACCAACCATGCCATGTGTGTCTGATCGCTACCGTTACTTTTCACTCCGATT
TATGGGCGGCCGGCCGGCCGACCCCTTTTACCGGGTCGGTCCTTTTCACCGAATTACCAACCCCAC---TATTATTGTCT
GCCCCACGCCACTATATATTTG------------CAGCATGCACGAGCCGAGCTCTTCGATCAGCTAGCCGCGCGCTTGC
ACCA------------------GCAAGAGTTGCACCGGTCGATCACAAATTCACAATGCAAGGCCTCGCGCCATCTTCAA
GGGTT---------------GTCGTGCTCGCGACGTTTTTCCTGATCGGTTTCGGCGT---------------GGCCGCC
GCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGATGACGCTCTACTACCACGACATCCT
CCACGACGGGGCCAACAACACGGCCAACGCGACGTCGGCGGCGGCGACGAGCCCGCCGGCGCT---------------GA
GCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGCCAGGCGCTGCCCGCCGGGGCCGAG
GAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGGTCGTTCAACGCGTGGTTCGCCTTCTCGCT
CGTGTTCAACTCCACGGCGCGCAGGGGCACCCTCAACCTCATGGGCGCCGACCTCATGGGCGAGGAGACGCGGGACATCT
CCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGCACCGACGCCGTCGAGGGGTTGCTC
TACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGGCCCTGAATATCACCTGATGAGATCATGGGA
TGCCGTAGGGAGGTGGTGGGATTAATATGCTAGCATACGCGTGTGCGGAACTGCCGATTAGGACTTAGGAGTGATGCATG
TATGCTGAAGCTGCTGCCGATGTGTTCGTGGTGTGATGTGCGTTGCATGCGTGG----GCATGTGGATCGTGTGTCATTG
TCGTGTTA--CGCCAATACGAGTGTAAAATGTACCGCACCTTTATTCTGTGT--TATAAAAACTCACTTTGCAAACGATA
ACAGCCCTAGCTTATCGCTGTAGAA--GCACACACCAGCTATTTCACCCAAAAGCC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGTTGTTGATGAGGTTCAAAGTGACGCTGAAATGGTACCAACCGCATGTTATTTTGCACAAGTTTTC
CCAGCATGGTGCTGGAACAACGACACTATACCAACCATGCCATGTGTGTCTGATCGCTACCGTTACTTTTCACTCCGATT
TATGGCAGGCCGGCCGG----CCCCTTTTACCGGGTCGGTCCTTTTCACCGAATTACCAACCCCACTAGTATTATTGTCT
GCCCCACGCCACTATATATATG------------CAGCATGCACGAGCCGAGCTCTTCGACCAGCTAGCCGCTTGCCCGC
CTAAGC---------ATAGCACGCAAGAGTTGCACCGATCGATA--------ACAATGCAAGGCCTCGCGGCAGCTTCAA
GGGTC---------------GTCGTGCTCGCGACGTTTTTCCTGATCGGTTTCGGCGT---------------GGCCGCC
GCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCTTGCAGGCAGATGACGCTCTTCTACCACGACATCCT
CCACGACGGCGCCAACAACACGGCCAACGCGACGTCGGCGGCCGCGACGAGCCCACCGGCGCT---------------GA
GCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGCCAGGCGCTGCCCGTCGGGGCCGAG
GAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGGTTCTTCAACGCGTGGTTCGCCTTCTCGCT
CGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAACCTCATGGGCGCCGACCTCATGGGCGAGGAGACGCGGGACATCT
CCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCAACCATCCGCACGGACGCCATCGAGGGCCTCTAC
TACTTCCGCTTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGACTTCGA--ATCACCTGATGAGATCATGGGA
TGCCGTAAGGAGGTAGTGGAATTAATATGCTAGCATACGCGTGTGCCGAACTGCCGATTA-------CGAGCGATGCATG
TATGCTGAAGCTGCTGCCGATGTGTTCGTGGTGTGATGTGCGTTGCATGCGTGG----GCACGTGGATCGTGTGTCATTG
TCGTGTTATACGCCAATATGGG-----AATGTAGCGCACCTTTATTCTGTGT--TATAAAAACTCACTTTCC--ATGATA
GCAGCCCTAGCTCATCGTTGTAGAAGTGCACACACCAGCTAGTTCACCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGCCTTCCACCTTGGGTGAATCCATGTACCAATCAATTTCAACACTTCACCTCAAGTTTAGACTCTTTCGGTGC
TTAA----GCTGAGATCAATGCAGACCACAACTACTTTTGTTAATAGTGCGTTGGCCGGGTTTTGTACATGAGACCTCAT
GGCTCTAATTTTATATTGA-------------------------------------------------------------
----------------------------------------------------ACTGAGCTATTTTAGCTTTTTCTAACAA
AAAGTTTGAGTAGTGAAGTGAAAAGAGGGTAAAGATTTCTTCCATCCTTCCTAGGTCCTTGTGCTTGCACCCTCTCAGAC
ATCTTTTTCACACTACAACTAGTTACCACAAAAGTCTAAATTCATGGACAAGAGCTGAGCTATGCCCCATGTGTTGATTG
TCAGGATCAACTAGGTTAAGGGACTGTTCGGAGTCCCTCTGCTCCACGCTGCCGCTCCCGGAGCTGGCGGAGTTTTAGTT
GAAAACCGCGGAGCGAGTGAACAGGTATTCATCAGATTCTTAAATTCCAGAGACCCCTAAGCTTGAGCCACATAGAAATG
AGAAGATGGACAATTACCTTGATCTT------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_976
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCAAGAGTTGCACT----GACA--------ACAATGCAAGGCCTCGCGGCATCTTCCA
AGCTGTCGCTGACCGTAGTGGT---CGTCGCGGTGTTTCTGC---------TCGGCTTG------------GCGGGCGCC
GCCCACGGCAGGAGGAAGCTCGTCTCCAGCGCCAACGACGAGCCGTGCAAGAAGATGACGCTCTACTACCACGACATCCT
CTACGACGGCGGCAACAACACGGCGAACGCCACGTCGGCAGCGGCCACGGAGCCGACGGCGCTGAGCAAT----------
-----AGCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCCATGACCAAAAGGAAGGCGCTGCCCGTTGGAAATGAG
CT---GCCCACGGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAAAGGGTCCTTGAACTCGTGGTTCGCTTTCTCACT
CGTGTTCAACTCCACGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCATGGGCGAGAGAACGCGGGACATCT
CCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGCACCGACGCCATGGAGGGCTTGTAC
TACTTCCGCT-----ATGGACATCAAACTCTACGAGTGCTATGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_976
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCGAGAGTTGCAAT----GAAG--------ACAATGCAAGCCCCAGCGGCATCTTCCA
AGATC---------------GT---GCTCGTGATGCTCCTGC---------TCGCCTTGGGCTTGGCGGGGGCAGCCGCC
GACAGCAGCCGGAGGAGGCTCGTCTCCAGCAGCTCCGACGAGCCGTGCAAGCAGATGACGCTCTACCTCCACGACATCCT
CTACAACGGCGTCAACAACACTGCCAACGCGACGGCGGCGCCGGCCACCAAGCCGACGGACCTGAGCACGTCGCACTGGA
GCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTCACGGAGGGGACGGCGCTGCCGGT---GGGGGAC
GAGGAGCCGGCGGCGCGCGCGCAGGGCTTCTACTTCTACGACAAGAAGGAGTCGTACAACGCGTGGTTCACCTTCTCCCT
CGTGTTCGACTCCAAGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCATGGACGACGAGACGCGCGACCTCT
CCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGTGGCATCGCCACCATCCGCACCGACGCCACCGAGGGCTACTTC
TACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_1000
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AATGCAAGGCCTCACGGCATCTTGCA
AGATC---------------GT---GCTCGTGATGTTTCTGC---------TCGGCTTAGGCTTGGCAGG---AGCCACC
GCCGACAGCCGTAGGAGGCACATCTCCAGCAGCCCTGACGAGCCGTGCAAGAAGATGACGCTCTACCTCCACGACATCCT
CTACAACGGTGTCAACAACAGTGCCAACGCGACGGCGGCGCCGGCGACCAAGCCGACGGACCTGAGCACAACGCACTGGA
GCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGGACGGCGCTGCCCAT---CGGGCAG
GAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAAGGAGTCGTACAGCGGGTGGTTCTCCTTCTCGCT
CGTGTTCAACTCAAAGGCATGCAGGGGCACCCTCAACCTCATGGGCGCCGATCCCATGGACGCGGAGACGCGTGACTTTT
CCGTCGTCGGGGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCGACGATCCACACCGACGCCACCGAAGGCTACTTC
TACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chrUn_1027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GGCC---------------GTCGTGGTCGCGGTGTTTCTCCTGGGCTCATC------G------------GCGGCCGCT
GCCCACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGATGACCCTCTACTACCACGACATCCT
CTACAACGGCGTCAACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCACGGCGCTGAGCACGACCCACTGGA
AGAACGGCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGTTGACGGTGGGGAAGGCGCTACCCGT---GGCGGGG
GAGGAGCCCGCGGCGCGCGCCCAGGGGTTCTACTTCTACGACAAGCAGGAGTCTTACACCTCCTGGTTTGGCTTCTCCAT
CGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCAGACCTCATGGATGACAAGACGCGGGACCTCT
CCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTTCGACTGGATGCCTCCGAGGGAGCCGTC
TACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_1062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TCGGCATG------------GCGGGCGCC
GCCCACGGCCTGACGAGAGTCGTCTCCAGCAGCCCCGACGAGCCGTGCATGAACATGACGCTCTACTACCACGACATCCT
CTACAACGGC---AACAACACGGCGAACGCGACGACGGCGGCGGCCACCAAGCCGACGGCGCTGGCCACGACCTACTGGA
AGAACAGCACCTACTTCGGCGCGCTGATGGTGTTCAACGACCCCATGACGGTGGGGAAGGCGCTGCCACT---GGCCGGG
GAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGCAGGAGTCGCTGACCTCCTGGTTCGGCTTCTCCAT
CGTGTTCAACTCGACGGCGCACAAGGGCACGCTCAACCTCGTCGGCGCCGACCTCATGGGCGACGCCACGCGGGACTTCT
CCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCACAACCATCCGCACTGACGCCATCGAGGGCCTCTAC
TACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACCTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2A_1070
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCGGCCGCT
GCCCACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGATGACGCTCTACTACCACGACATCCT
CTACAACGGCGTCAACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCACGGCGCTGAGCACGACCCACTGGA
AGAACGGCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCATTGACGGTGGGGAAGGCGCTACCCGT---GGCCGGG
GAGGAGCCCGCGGCGCGCGCCCAGGGGTTCTACTTCTACGACAAGCAGGAGTCGTACACCTCCTGGTTTGGCTTCTCCAT
CGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCGGACCTCATGGACGACAAGACGCGGGACCTCT
CCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGCCTTGACGCCTCCGAGGGAGCCGTC
TACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_1073
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCCGCC
CCTGACAGCCGTAGGAGGCACATCTCCAGCAGCCCTGACG-------CAAGAAGATGACGCTGTACCTCCACGACATCCT
CTACAACGGCGTCAACAACACCGCCAACGCGACCGCCGCGCCGGTCACCAAGCCGACGGACCTGAGCACGTCGCACTGGA
GCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTGACGGAGGGGACGGCGCTGCCGGT---CGGGGAC
GAGGAGCCGGCGGCGCGCGCGCAGGGCTTCTACTTCTACGACAAG---GAGTCGTACAGCGGGTGGTTCTCCTTCTCACT
CGTGTTCAACTCAAAGGCATACAGGGGCACGCTCAACCTCATGGGCGCCGATCCCATGGACGAGGAGACTCGTGACTTCT
CCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCGACTATCCGCACCGACGCCACCT-GGGCTACTTC
TACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_1076
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCC
GCCCACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGATGACGCTCTACTACCACGACATCCT
CTACAACGGCGT-AACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCACGGCGCCGAGCACGACCCACTGGA
AGAACGGCACCTACTTCGGCACGCTTGTGGTGTTCGACGACCCCATGACGGTGGGGAAGGCGCTACCCGT---GGCGGGG
GAGGAGCCCGCGGCGCGCGCCCAGGGCTTCTACTTCTACGACAAGCAGGAGTCTTACACCTCGTGGTTTGGTTTCTCCAT
TGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCGGACCTCATGGATGACAAGACGCGGGACCTCT
CCGTCGTCGGCGGCACTGGCGATTTCTTCATGGCGCGCGGCATCGCCACGCTCCGGCTCGATGCCTCCGAGGGAACCGTC
TACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2A_1083
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGATGACGCTCTACTACCACGACATCCT
CTACAACGGCGTCAACAACACGAAGAACGCGACGTCGGCGGCGGCCACAAAGCCCACGGCGCTGAGCACGACCCACTGGA
AGAACGGCACCTACTTCGGCACGCTCGTGGTGTTCAACGACCCCATGACGGTGGGGAAGGCGCTACCCGT---GGCAGGG
GAGGAGCCTGCGGCGCGCGCCCAGGAGTTTTACTTCTACGACAAGCAGGAGTCATACACCTCCTGGTTTGGCTTCTCCAT
CGTCTTCAACTCCACGGCGCACAAGGGCACCCTCAACCTCGTCGGTGCGGACCTCATGGATGACAAGACGCGGGACCTCT
CTGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGGGGCATCGCCACCCTCCGCCTCGATGCCTCCGAGGGAACCGTC
TACTTCCGTCTACAGATGGACATCAAGCTCTACGAGTGCTACGTATGAGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
-----------S--------------------------------S--------------------S----------S---
--------------------SS------------------------S---SSSS--------------------------
--S-------S---SS------------------------S--------S---------S--S---SS-S--S------S
----S--SS-------------SSSSSSSSSSSSS-----------------------S---------------------
----------------------------------------------------------------------SS-S------
---------SSSSSSSSSSSS--S-------SSS----S--------------S------S--S-----S---------S
-SS-------------------------------------------SS--------------------------S----S
S--S----S--S---------------------------------------------------------S----------
-----------S---------S----------S---S---------S-----S--------SSSSS-SSSSSSSS-SSSS
SS-SSSS---S-S--SSS-S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------SSS----SS-S--S-S-SS--SSSSSSSSSS----------------
----------------------------------------S-------S-------------------------------
-------------------------------------S-------------------------------------S----
----S------------------------------------------------------------------S--------
--S-------SS-------SS-SSSSSSSSSSSS-------------------S---------------SS--S--S-SS
--SSSSSSSSSSSSS------S----------------------------------------------------------
-----------------------S----------------------------------S--------------S------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-------------------------------------S------------------------------------------
--------------------S-----------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------S---S------------------S----SSSS----------------------
---------------------------------------------S------SS------S-------------------
---S-----------S---------------S----S--S--S-------------SSSSSSSSSSSSSSSSSSSSSSS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------S---------S-----S---------------S--S----------S-----
----SSSS---S---------S-----S---S-SS-----SSS--SSSSSSSSSSSSSS-SS--SSSSSSS-SSSSSSSS
SS---SSSS--SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--------------
------------------------------------S-----------------S--------------------SSSSS
S---------S---S-------------S-------------S------------S-----SS-----------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_66
----------------------------------------------TGATGGAGGGATCAACGCAC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2218
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGCATGTGGATCGTGTGTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
