Multiple sequence alignment - TraesCS1D01G428500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G428500 chr1D 100.000 3170 0 0 1 3170 480611283 480608114 0.000000e+00 5854.0
1 TraesCS1D01G428500 chr1D 100.000 54 0 0 3395 3448 480607889 480607836 2.190000e-17 100.0
2 TraesCS1D01G428500 chr1B 86.961 2017 144 58 658 2647 668983747 668981823 0.000000e+00 2158.0
3 TraesCS1D01G428500 chr1B 88.067 419 19 12 77 464 668984520 668984102 5.210000e-128 468.0
4 TraesCS1D01G428500 chr1B 87.615 218 27 0 2840 3057 668981774 668981557 1.590000e-63 254.0
5 TraesCS1D01G428500 chr1B 83.399 253 32 6 2393 2639 668972051 668971803 3.460000e-55 226.0
6 TraesCS1D01G428500 chr1B 92.105 76 6 0 1 76 668984624 668984549 1.310000e-19 108.0
7 TraesCS1D01G428500 chr1B 93.443 61 4 0 608 668 668984042 668983982 1.320000e-14 91.6
8 TraesCS1D01G428500 chr1A 87.448 1689 134 41 1015 2659 577080733 577079079 0.000000e+00 1873.0
9 TraesCS1D01G428500 chr1A 86.122 1016 60 23 1 959 577081723 577080732 0.000000e+00 1020.0
10 TraesCS1D01G428500 chr1A 85.147 781 69 22 1907 2672 577056393 577055645 0.000000e+00 756.0
11 TraesCS1D01G428500 chr1A 85.867 375 36 4 1527 1897 577063073 577062712 1.940000e-102 383.0
12 TraesCS1D01G428500 chr1A 91.262 103 9 0 1192 1294 577073632 577073530 1.290000e-29 141.0
13 TraesCS1D01G428500 chr1A 96.000 50 2 0 3397 3446 163385220 163385269 7.930000e-12 82.4
14 TraesCS1D01G428500 chr1A 96.000 50 2 0 3397 3446 202066657 202066608 7.930000e-12 82.4
15 TraesCS1D01G428500 chr1A 95.918 49 2 0 3397 3445 498000647 498000695 2.850000e-11 80.5
16 TraesCS1D01G428500 chr3D 91.195 159 10 3 2689 2844 580330736 580330579 2.700000e-51 213.0
17 TraesCS1D01G428500 chr3D 76.210 248 44 12 1738 1975 414637792 414637550 2.170000e-22 117.0
18 TraesCS1D01G428500 chr7D 90.244 164 12 3 2681 2841 47404246 47404408 9.700000e-51 211.0
19 TraesCS1D01G428500 chr7D 95.918 49 2 0 3397 3445 336302386 336302338 2.850000e-11 80.5
20 TraesCS1D01G428500 chr3B 91.139 158 10 3 2688 2842 14466991 14466835 9.700000e-51 211.0
21 TraesCS1D01G428500 chr3B 90.566 159 11 3 2686 2841 506736063 506736220 1.250000e-49 207.0
22 TraesCS1D01G428500 chr3B 76.623 231 39 12 1738 1958 540476691 540476466 2.810000e-21 113.0
23 TraesCS1D01G428500 chr3B 96.000 50 2 0 3397 3446 738294435 738294484 7.930000e-12 82.4
24 TraesCS1D01G428500 chr7A 88.679 159 14 3 2689 2844 130229541 130229698 1.260000e-44 191.0
25 TraesCS1D01G428500 chr7A 96.000 50 2 0 3397 3446 458323175 458323126 7.930000e-12 82.4
26 TraesCS1D01G428500 chr2D 86.228 167 19 4 2689 2853 29624506 29624342 9.830000e-41 178.0
27 TraesCS1D01G428500 chr2D 85.976 164 18 4 2685 2844 556055816 556055654 1.650000e-38 171.0
28 TraesCS1D01G428500 chr4D 86.875 160 17 2 2686 2842 428383403 428383561 3.540000e-40 176.0
29 TraesCS1D01G428500 chr2A 87.037 162 12 7 2689 2845 86445858 86446015 1.270000e-39 174.0
30 TraesCS1D01G428500 chr3A 77.178 241 42 11 1738 1969 535727584 535727820 1.000000e-25 128.0
31 TraesCS1D01G428500 chr3A 100.000 28 0 0 2874 2901 612310654 612310681 6.000000e-03 52.8
32 TraesCS1D01G428500 chr6D 75.000 220 44 9 1771 1983 62270839 62271054 1.320000e-14 91.6
33 TraesCS1D01G428500 chr2B 96.000 50 2 0 3397 3446 234448185 234448234 7.930000e-12 82.4
34 TraesCS1D01G428500 chrUn 94.231 52 3 0 3395 3446 2371456 2371405 2.850000e-11 80.5
35 TraesCS1D01G428500 chr5D 95.833 48 2 0 3397 3444 413579582 413579629 1.030000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G428500 chr1D 480607836 480611283 3447 True 2977.00 5854 100.0000 1 3448 2 chr1D.!!$R1 3447
1 TraesCS1D01G428500 chr1B 668981557 668984624 3067 True 615.92 2158 89.6382 1 3057 5 chr1B.!!$R2 3056
2 TraesCS1D01G428500 chr1A 577079079 577081723 2644 True 1446.50 1873 86.7850 1 2659 2 chr1A.!!$R5 2658
3 TraesCS1D01G428500 chr1A 577055645 577056393 748 True 756.00 756 85.1470 1907 2672 1 chr1A.!!$R2 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 218 0.320421 GCACGTTCTTCCAGTAGCCA 60.320 55.0 0.0 0.0 0.0 4.75 F
1347 1716 0.459489 TGTTTGGTTGTTGGAGCTGC 59.541 50.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1498 1868 0.228238 CAGCACGAATTCGATCTCGC 59.772 55.0 33.05 23.37 43.02 5.03 R
2494 2900 0.170561 CATTGCCACTCTGCTTCTGC 59.829 55.0 0.00 0.00 40.20 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 3.197790 CGCCGAGCCATGAACCTG 61.198 66.667 0.00 0.00 0.00 4.00
47 48 0.749454 GCCGAGCCATGAACCTGAAT 60.749 55.000 0.00 0.00 0.00 2.57
173 218 0.320421 GCACGTTCTTCCAGTAGCCA 60.320 55.000 0.00 0.00 0.00 4.75
181 226 1.139853 CTTCCAGTAGCCATGGACCTC 59.860 57.143 18.40 0.00 46.46 3.85
278 323 3.006110 CAGCTGCCCAAGAAGATGAAAAA 59.994 43.478 0.00 0.00 31.44 1.94
279 324 3.257624 AGCTGCCCAAGAAGATGAAAAAG 59.742 43.478 0.00 0.00 0.00 2.27
357 417 4.038763 TGATCGAGCTTCCGTTTATACCAT 59.961 41.667 0.90 0.00 0.00 3.55
361 421 4.500205 CGAGCTTCCGTTTATACCATACCA 60.500 45.833 0.00 0.00 0.00 3.25
423 483 4.991687 ACAGTGAAAAGAAGACGAGATTCC 59.008 41.667 0.00 0.00 0.00 3.01
424 484 4.991056 CAGTGAAAAGAAGACGAGATTCCA 59.009 41.667 0.00 0.00 0.00 3.53
448 508 3.893813 ACTTTACCACCAACTCGAGTACT 59.106 43.478 20.39 0.04 0.00 2.73
482 550 2.614983 GACGGGTTAAAGAACAACTGCA 59.385 45.455 0.00 0.00 37.29 4.41
497 583 7.776969 AGAACAACTGCATGATTATACCAAGAT 59.223 33.333 0.00 0.00 0.00 2.40
498 584 7.268199 ACAACTGCATGATTATACCAAGATG 57.732 36.000 0.00 0.00 0.00 2.90
499 585 5.954296 ACTGCATGATTATACCAAGATGC 57.046 39.130 0.00 0.00 37.34 3.91
501 587 5.829391 ACTGCATGATTATACCAAGATGCAA 59.171 36.000 0.00 0.00 44.00 4.08
502 588 6.321945 ACTGCATGATTATACCAAGATGCAAA 59.678 34.615 0.00 0.00 44.00 3.68
504 590 7.554211 TGCATGATTATACCAAGATGCAAAAA 58.446 30.769 0.00 0.00 42.29 1.94
505 591 8.205512 TGCATGATTATACCAAGATGCAAAAAT 58.794 29.630 0.00 0.00 42.29 1.82
506 592 8.492748 GCATGATTATACCAAGATGCAAAAATG 58.507 33.333 0.00 0.00 36.91 2.32
507 593 8.984764 CATGATTATACCAAGATGCAAAAATGG 58.015 33.333 8.99 8.99 37.19 3.16
508 594 7.499292 TGATTATACCAAGATGCAAAAATGGG 58.501 34.615 13.59 4.12 35.44 4.00
509 595 6.865834 TTATACCAAGATGCAAAAATGGGT 57.134 33.333 13.59 9.00 35.44 4.51
510 596 3.405823 ACCAAGATGCAAAAATGGGTG 57.594 42.857 13.59 0.00 35.44 4.61
511 597 2.705127 ACCAAGATGCAAAAATGGGTGT 59.295 40.909 13.59 0.00 35.44 4.16
512 598 3.068560 CCAAGATGCAAAAATGGGTGTG 58.931 45.455 0.00 0.00 0.00 3.82
513 599 3.494749 CCAAGATGCAAAAATGGGTGTGT 60.495 43.478 0.00 0.00 0.00 3.72
514 600 4.128643 CAAGATGCAAAAATGGGTGTGTT 58.871 39.130 0.00 0.00 0.00 3.32
515 601 3.993920 AGATGCAAAAATGGGTGTGTTC 58.006 40.909 0.00 0.00 0.00 3.18
516 602 3.642848 AGATGCAAAAATGGGTGTGTTCT 59.357 39.130 0.00 0.00 0.00 3.01
517 603 3.902881 TGCAAAAATGGGTGTGTTCTT 57.097 38.095 0.00 0.00 0.00 2.52
518 604 4.213564 TGCAAAAATGGGTGTGTTCTTT 57.786 36.364 0.00 0.00 0.00 2.52
519 605 4.583871 TGCAAAAATGGGTGTGTTCTTTT 58.416 34.783 0.00 0.00 0.00 2.27
520 606 4.394300 TGCAAAAATGGGTGTGTTCTTTTG 59.606 37.500 0.00 0.00 37.02 2.44
521 607 4.201901 GCAAAAATGGGTGTGTTCTTTTGG 60.202 41.667 7.08 0.00 35.38 3.28
522 608 3.836365 AAATGGGTGTGTTCTTTTGGG 57.164 42.857 0.00 0.00 0.00 4.12
523 609 2.765689 ATGGGTGTGTTCTTTTGGGA 57.234 45.000 0.00 0.00 0.00 4.37
524 610 2.534042 TGGGTGTGTTCTTTTGGGAA 57.466 45.000 0.00 0.00 0.00 3.97
525 611 2.383855 TGGGTGTGTTCTTTTGGGAAG 58.616 47.619 0.00 0.00 0.00 3.46
526 612 1.686587 GGGTGTGTTCTTTTGGGAAGG 59.313 52.381 0.00 0.00 0.00 3.46
527 613 2.661718 GGTGTGTTCTTTTGGGAAGGA 58.338 47.619 0.00 0.00 0.00 3.36
528 614 3.230976 GGTGTGTTCTTTTGGGAAGGAT 58.769 45.455 0.00 0.00 0.00 3.24
563 649 2.583143 TGACGAACAGAACAGAGGAGA 58.417 47.619 0.00 0.00 0.00 3.71
564 650 2.956333 TGACGAACAGAACAGAGGAGAA 59.044 45.455 0.00 0.00 0.00 2.87
565 651 3.243434 TGACGAACAGAACAGAGGAGAAC 60.243 47.826 0.00 0.00 0.00 3.01
566 652 2.036089 ACGAACAGAACAGAGGAGAACC 59.964 50.000 0.00 0.00 0.00 3.62
567 653 2.678324 GAACAGAACAGAGGAGAACCG 58.322 52.381 0.00 0.00 41.83 4.44
568 654 0.969894 ACAGAACAGAGGAGAACCGG 59.030 55.000 0.00 0.00 41.83 5.28
569 655 0.969894 CAGAACAGAGGAGAACCGGT 59.030 55.000 0.00 0.00 41.83 5.28
570 656 2.168496 CAGAACAGAGGAGAACCGGTA 58.832 52.381 8.00 0.00 41.83 4.02
582 668 3.884091 GAGAACCGGTAGAGCTGAGAATA 59.116 47.826 8.00 0.00 0.00 1.75
600 686 4.772624 AGAATAGTAACAGAGCAGTGGTGA 59.227 41.667 0.00 0.00 0.00 4.02
626 712 2.903678 CTCACAACACAACACGTATGC 58.096 47.619 0.00 0.00 0.00 3.14
628 714 0.948678 ACAACACAACACGTATGCCC 59.051 50.000 0.00 0.00 0.00 5.36
660 746 0.677288 CGGTACATATTCTCCCGGCA 59.323 55.000 0.00 0.00 35.11 5.69
676 1007 0.736325 GGCAGTGCGTCGAACTGTAT 60.736 55.000 29.59 0.00 45.58 2.29
801 1132 3.131577 TCAAAATCTCATCATGGGCAAGC 59.868 43.478 0.00 0.00 0.00 4.01
857 1199 3.308530 GGGTTTCTTTGCATCTTTCACG 58.691 45.455 0.00 0.00 0.00 4.35
862 1204 1.879380 CTTTGCATCTTTCACGTCCCA 59.121 47.619 0.00 0.00 0.00 4.37
871 1213 2.032071 CACGTCCCAACTCACCCC 59.968 66.667 0.00 0.00 0.00 4.95
872 1214 2.446994 ACGTCCCAACTCACCCCA 60.447 61.111 0.00 0.00 0.00 4.96
879 1232 1.328279 CCAACTCACCCCACCTTTTC 58.672 55.000 0.00 0.00 0.00 2.29
882 1235 0.996762 ACTCACCCCACCTTTTCCCA 60.997 55.000 0.00 0.00 0.00 4.37
908 1261 5.357878 CACCTTTGGCTTAATCTATTGCTCA 59.642 40.000 0.00 0.00 0.00 4.26
909 1262 5.951747 ACCTTTGGCTTAATCTATTGCTCAA 59.048 36.000 0.00 0.00 0.00 3.02
924 1277 2.025155 GCTCAATGTCTCGTCTCCCTA 58.975 52.381 0.00 0.00 0.00 3.53
967 1321 2.677228 TGGCCTCCCAGCTAAAGC 59.323 61.111 3.32 0.00 35.79 3.51
989 1343 1.842010 CTCCTATTCCCCGACCCCC 60.842 68.421 0.00 0.00 0.00 5.40
1026 1380 2.770164 ATAATAGCCCGATGGTGCTC 57.230 50.000 0.00 0.00 39.00 4.26
1093 1448 4.411981 AGGCAGCAGCAGAGCAGG 62.412 66.667 2.65 0.00 44.61 4.85
1123 1478 3.242543 GCTCAATCCACACTTGATAAGCG 60.243 47.826 0.00 0.00 32.50 4.68
1124 1479 2.677836 TCAATCCACACTTGATAAGCGC 59.322 45.455 0.00 0.00 0.00 5.92
1131 1486 3.189287 CACACTTGATAAGCGCCTTTTCT 59.811 43.478 2.29 0.00 0.00 2.52
1132 1487 3.437049 ACACTTGATAAGCGCCTTTTCTC 59.563 43.478 2.29 0.00 0.00 2.87
1133 1488 3.686726 CACTTGATAAGCGCCTTTTCTCT 59.313 43.478 2.29 0.00 0.00 3.10
1134 1489 3.935828 ACTTGATAAGCGCCTTTTCTCTC 59.064 43.478 2.29 0.00 0.00 3.20
1135 1490 3.895232 TGATAAGCGCCTTTTCTCTCT 57.105 42.857 2.29 0.00 0.00 3.10
1136 1491 3.786635 TGATAAGCGCCTTTTCTCTCTC 58.213 45.455 2.29 0.00 0.00 3.20
1137 1492 3.449018 TGATAAGCGCCTTTTCTCTCTCT 59.551 43.478 2.29 0.00 0.00 3.10
1138 1493 2.378445 AAGCGCCTTTTCTCTCTCTC 57.622 50.000 2.29 0.00 0.00 3.20
1144 1499 3.181497 CGCCTTTTCTCTCTCTCTCTCTG 60.181 52.174 0.00 0.00 0.00 3.35
1220 1584 0.607489 TGCTTGGCCTCTCTTCTTGC 60.607 55.000 3.32 0.00 0.00 4.01
1252 1616 3.231889 CTCTGCTGCCACGGTGAGT 62.232 63.158 10.28 0.00 0.00 3.41
1266 1630 1.437625 GTGAGTTTCTCAGCTCCAGC 58.562 55.000 0.00 0.00 41.46 4.85
1273 1637 0.969917 TCTCAGCTCCAGCACTCTCC 60.970 60.000 0.48 0.00 45.16 3.71
1274 1638 2.183811 CAGCTCCAGCACTCTCCG 59.816 66.667 0.48 0.00 45.16 4.63
1277 1641 1.188219 AGCTCCAGCACTCTCCGAAA 61.188 55.000 0.48 0.00 45.16 3.46
1278 1642 1.016653 GCTCCAGCACTCTCCGAAAC 61.017 60.000 0.00 0.00 41.59 2.78
1279 1643 0.605589 CTCCAGCACTCTCCGAAACT 59.394 55.000 0.00 0.00 0.00 2.66
1280 1644 0.603569 TCCAGCACTCTCCGAAACTC 59.396 55.000 0.00 0.00 0.00 3.01
1285 1654 4.279671 CCAGCACTCTCCGAAACTCTATAT 59.720 45.833 0.00 0.00 0.00 0.86
1296 1665 5.628193 CCGAAACTCTATATATGCGTTCGTT 59.372 40.000 13.31 0.00 0.00 3.85
1298 1667 7.306399 CCGAAACTCTATATATGCGTTCGTTTT 60.306 37.037 13.31 0.00 0.00 2.43
1309 1678 2.277834 GCGTTCGTTTTTCAGTTGGTTG 59.722 45.455 0.00 0.00 0.00 3.77
1310 1679 2.849473 CGTTCGTTTTTCAGTTGGTTGG 59.151 45.455 0.00 0.00 0.00 3.77
1311 1680 3.426426 CGTTCGTTTTTCAGTTGGTTGGA 60.426 43.478 0.00 0.00 0.00 3.53
1312 1681 4.678622 GTTCGTTTTTCAGTTGGTTGGAT 58.321 39.130 0.00 0.00 0.00 3.41
1313 1682 4.300189 TCGTTTTTCAGTTGGTTGGATG 57.700 40.909 0.00 0.00 0.00 3.51
1314 1683 3.067461 TCGTTTTTCAGTTGGTTGGATGG 59.933 43.478 0.00 0.00 0.00 3.51
1320 1689 3.370104 TCAGTTGGTTGGATGGTTTTGT 58.630 40.909 0.00 0.00 0.00 2.83
1322 1691 4.223923 TCAGTTGGTTGGATGGTTTTGTTT 59.776 37.500 0.00 0.00 0.00 2.83
1323 1692 4.570369 CAGTTGGTTGGATGGTTTTGTTTC 59.430 41.667 0.00 0.00 0.00 2.78
1325 1694 2.761208 TGGTTGGATGGTTTTGTTTCGT 59.239 40.909 0.00 0.00 0.00 3.85
1326 1695 3.120041 GGTTGGATGGTTTTGTTTCGTG 58.880 45.455 0.00 0.00 0.00 4.35
1347 1716 0.459489 TGTTTGGTTGTTGGAGCTGC 59.541 50.000 0.00 0.00 0.00 5.25
1490 1860 6.755190 GCTTTTGCTTGCTTAATGATGTAAC 58.245 36.000 0.00 0.00 43.35 2.50
1493 1863 8.654230 TTTTGCTTGCTTAATGATGTAACAAA 57.346 26.923 0.00 0.00 0.00 2.83
1498 1868 9.443283 GCTTGCTTAATGATGTAACAAAGATAG 57.557 33.333 0.00 0.00 0.00 2.08
1499 1869 9.443283 CTTGCTTAATGATGTAACAAAGATAGC 57.557 33.333 0.00 0.00 0.00 2.97
1500 1870 7.630026 TGCTTAATGATGTAACAAAGATAGCG 58.370 34.615 0.00 0.00 0.00 4.26
1509 1894 6.504398 TGTAACAAAGATAGCGAGATCGAAT 58.496 36.000 6.39 0.00 43.02 3.34
1519 1904 1.778026 CGAGATCGAATTCGTGCTGAG 59.222 52.381 25.93 15.51 43.02 3.35
1539 1932 1.940613 GTTCAGTTTGGTTCGAGCTGT 59.059 47.619 0.00 0.00 29.90 4.40
1558 1951 0.752009 TAGCGAGAGGGTTCGAGCAT 60.752 55.000 0.53 0.00 43.03 3.79
1559 1952 1.590259 GCGAGAGGGTTCGAGCATC 60.590 63.158 0.53 0.00 43.03 3.91
1672 2071 3.948719 GTCCCGCTGGTGAACCCA 61.949 66.667 0.00 0.00 42.51 4.51
1675 2074 2.203280 CCGCTGGTGAACCCAACA 60.203 61.111 0.00 0.00 44.65 3.33
1969 2368 3.314331 CTCACCAGCACCGACCCT 61.314 66.667 0.00 0.00 0.00 4.34
2035 2434 7.941238 ACCATCATTCCATCAATTCCTAACTAG 59.059 37.037 0.00 0.00 0.00 2.57
2100 2503 3.474904 CGATGCAACGAACGGCGA 61.475 61.111 16.62 0.00 44.57 5.54
2105 2508 3.036084 CAACGAACGGCGAGCAGT 61.036 61.111 16.62 4.97 44.57 4.40
2225 2628 1.436336 CGGCTACTACAACTCCCCG 59.564 63.158 0.00 0.00 0.00 5.73
2234 2637 0.032017 ACAACTCCCCGCCTCTCTAT 60.032 55.000 0.00 0.00 0.00 1.98
2406 2812 1.794222 GCAGGCTTGTAATTCGCGT 59.206 52.632 5.77 0.00 0.00 6.01
2434 2840 0.625849 ACTTGGAGGCCGGAATGAAT 59.374 50.000 5.05 0.00 0.00 2.57
2444 2850 2.356069 GCCGGAATGAATTGAAGAGGAC 59.644 50.000 5.05 0.00 0.00 3.85
2447 2853 4.383552 CCGGAATGAATTGAAGAGGACTCT 60.384 45.833 0.00 0.00 42.75 3.24
2449 2855 5.495640 GGAATGAATTGAAGAGGACTCTGT 58.504 41.667 2.05 0.00 40.36 3.41
2456 2862 4.753516 TGAAGAGGACTCTGTTGAACAA 57.246 40.909 2.05 0.00 40.36 2.83
2494 2900 2.826777 AAACAGAGGAGGCGCCATGG 62.827 60.000 31.54 7.63 40.02 3.66
2507 2913 1.654954 GCCATGGCAGAAGCAGAGTG 61.655 60.000 32.08 0.00 44.61 3.51
2515 2929 0.403271 AGAAGCAGAGTGGCAATGGT 59.597 50.000 0.00 0.00 35.83 3.55
2518 2939 0.330604 AGCAGAGTGGCAATGGTCAT 59.669 50.000 0.00 0.00 35.83 3.06
2521 2942 0.904649 AGAGTGGCAATGGTCATCGA 59.095 50.000 0.00 0.00 0.00 3.59
2526 2947 0.462581 GGCAATGGTCATCGAGCAGA 60.463 55.000 2.11 0.00 43.30 4.26
2527 2948 1.590932 GCAATGGTCATCGAGCAGAT 58.409 50.000 2.11 0.00 43.30 2.90
2535 2957 3.376540 GTCATCGAGCAGATTGGTAGTC 58.623 50.000 0.00 0.00 37.52 2.59
2556 2978 3.493129 TCGTCAGTCAGTGTTGCAAATAC 59.507 43.478 0.00 3.60 38.32 1.89
2592 3014 1.082756 GTCAGCGAGTTTTGGCGTG 60.083 57.895 0.00 0.00 32.70 5.34
2593 3015 1.522806 TCAGCGAGTTTTGGCGTGT 60.523 52.632 0.00 0.00 32.70 4.49
2594 3016 1.369209 CAGCGAGTTTTGGCGTGTG 60.369 57.895 0.00 0.00 32.70 3.82
2595 3017 2.725815 GCGAGTTTTGGCGTGTGC 60.726 61.111 0.00 0.00 41.71 4.57
2596 3018 3.022287 CGAGTTTTGGCGTGTGCT 58.978 55.556 0.00 0.00 42.25 4.40
2597 3019 1.355210 CGAGTTTTGGCGTGTGCTT 59.645 52.632 0.00 0.00 42.25 3.91
2598 3020 0.657368 CGAGTTTTGGCGTGTGCTTC 60.657 55.000 0.00 0.00 42.25 3.86
2599 3021 0.380378 GAGTTTTGGCGTGTGCTTCA 59.620 50.000 0.00 0.00 42.25 3.02
2600 3022 0.381801 AGTTTTGGCGTGTGCTTCAG 59.618 50.000 0.00 0.00 42.25 3.02
2601 3023 0.594796 GTTTTGGCGTGTGCTTCAGG 60.595 55.000 0.00 0.00 42.25 3.86
2602 3024 1.034838 TTTTGGCGTGTGCTTCAGGT 61.035 50.000 0.00 0.00 42.25 4.00
2603 3025 1.723608 TTTGGCGTGTGCTTCAGGTG 61.724 55.000 0.00 0.00 42.25 4.00
2604 3026 4.030452 GGCGTGTGCTTCAGGTGC 62.030 66.667 0.00 0.00 42.25 5.01
2605 3027 4.374702 GCGTGTGCTTCAGGTGCG 62.375 66.667 0.00 0.00 38.39 5.34
2626 3059 4.727734 GCGATGTTTGTACTACTTGCATGG 60.728 45.833 4.44 0.00 0.00 3.66
2641 3074 4.859304 TGCATGGCATATTTCTCCATTC 57.141 40.909 0.00 0.00 38.46 2.67
2693 3131 4.954092 CAAGTTCTTTGGCATCTACTCC 57.046 45.455 0.00 0.00 32.95 3.85
2694 3132 3.636153 AGTTCTTTGGCATCTACTCCC 57.364 47.619 0.00 0.00 0.00 4.30
2695 3133 3.185455 AGTTCTTTGGCATCTACTCCCT 58.815 45.455 0.00 0.00 0.00 4.20
2696 3134 3.198853 AGTTCTTTGGCATCTACTCCCTC 59.801 47.826 0.00 0.00 0.00 4.30
2697 3135 2.119495 TCTTTGGCATCTACTCCCTCC 58.881 52.381 0.00 0.00 0.00 4.30
2698 3136 0.830648 TTTGGCATCTACTCCCTCCG 59.169 55.000 0.00 0.00 0.00 4.63
2699 3137 0.325296 TTGGCATCTACTCCCTCCGT 60.325 55.000 0.00 0.00 0.00 4.69
2700 3138 0.325296 TGGCATCTACTCCCTCCGTT 60.325 55.000 0.00 0.00 0.00 4.44
2701 3139 1.063492 TGGCATCTACTCCCTCCGTTA 60.063 52.381 0.00 0.00 0.00 3.18
2702 3140 1.340568 GGCATCTACTCCCTCCGTTAC 59.659 57.143 0.00 0.00 0.00 2.50
2703 3141 2.308690 GCATCTACTCCCTCCGTTACT 58.691 52.381 0.00 0.00 0.00 2.24
2704 3142 2.694109 GCATCTACTCCCTCCGTTACTT 59.306 50.000 0.00 0.00 0.00 2.24
2705 3143 3.887716 GCATCTACTCCCTCCGTTACTTA 59.112 47.826 0.00 0.00 0.00 2.24
2706 3144 4.340381 GCATCTACTCCCTCCGTTACTTAA 59.660 45.833 0.00 0.00 0.00 1.85
2707 3145 5.010820 GCATCTACTCCCTCCGTTACTTAAT 59.989 44.000 0.00 0.00 0.00 1.40
2708 3146 6.208204 GCATCTACTCCCTCCGTTACTTAATA 59.792 42.308 0.00 0.00 0.00 0.98
2709 3147 7.093858 GCATCTACTCCCTCCGTTACTTAATAT 60.094 40.741 0.00 0.00 0.00 1.28
2710 3148 9.458727 CATCTACTCCCTCCGTTACTTAATATA 57.541 37.037 0.00 0.00 0.00 0.86
2712 3150 9.866655 TCTACTCCCTCCGTTACTTAATATAAA 57.133 33.333 0.00 0.00 0.00 1.40
2714 3152 8.773033 ACTCCCTCCGTTACTTAATATAAAGA 57.227 34.615 0.00 0.00 0.00 2.52
2715 3153 9.377238 ACTCCCTCCGTTACTTAATATAAAGAT 57.623 33.333 0.00 0.00 0.00 2.40
2716 3154 9.857957 CTCCCTCCGTTACTTAATATAAAGATC 57.142 37.037 0.00 0.00 0.00 2.75
2717 3155 9.597681 TCCCTCCGTTACTTAATATAAAGATCT 57.402 33.333 0.00 0.00 0.00 2.75
2737 3175 9.617975 AAGATCTTTTAGCTTTTTCTTGATTCG 57.382 29.630 0.88 0.00 26.00 3.34
2738 3176 8.787852 AGATCTTTTAGCTTTTTCTTGATTCGT 58.212 29.630 0.00 0.00 0.00 3.85
2741 3179 9.825972 TCTTTTAGCTTTTTCTTGATTCGTATG 57.174 29.630 0.00 0.00 0.00 2.39
2742 3180 8.447787 TTTTAGCTTTTTCTTGATTCGTATGC 57.552 30.769 0.00 0.00 0.00 3.14
2743 3181 5.627499 AGCTTTTTCTTGATTCGTATGCA 57.373 34.783 0.00 0.00 0.00 3.96
2744 3182 6.199937 AGCTTTTTCTTGATTCGTATGCAT 57.800 33.333 3.79 3.79 0.00 3.96
2745 3183 6.032094 AGCTTTTTCTTGATTCGTATGCATG 58.968 36.000 10.16 0.00 0.00 4.06
2746 3184 5.801947 GCTTTTTCTTGATTCGTATGCATGT 59.198 36.000 10.16 0.00 0.00 3.21
2747 3185 6.966632 GCTTTTTCTTGATTCGTATGCATGTA 59.033 34.615 10.16 0.00 0.00 2.29
2748 3186 7.044706 GCTTTTTCTTGATTCGTATGCATGTAC 60.045 37.037 10.16 0.00 0.00 2.90
2749 3187 5.984233 TTCTTGATTCGTATGCATGTACC 57.016 39.130 10.16 0.00 0.00 3.34
2750 3188 5.017294 TCTTGATTCGTATGCATGTACCA 57.983 39.130 10.16 0.00 0.00 3.25
2751 3189 5.610398 TCTTGATTCGTATGCATGTACCAT 58.390 37.500 10.16 0.00 0.00 3.55
2752 3190 6.054941 TCTTGATTCGTATGCATGTACCATT 58.945 36.000 10.16 0.00 0.00 3.16
2753 3191 6.542005 TCTTGATTCGTATGCATGTACCATTT 59.458 34.615 10.16 0.00 0.00 2.32
2754 3192 6.691754 TGATTCGTATGCATGTACCATTTT 57.308 33.333 10.16 0.00 0.00 1.82
2755 3193 7.793927 TGATTCGTATGCATGTACCATTTTA 57.206 32.000 10.16 0.00 0.00 1.52
2756 3194 7.860613 TGATTCGTATGCATGTACCATTTTAG 58.139 34.615 10.16 0.00 0.00 1.85
2757 3195 7.497579 TGATTCGTATGCATGTACCATTTTAGT 59.502 33.333 10.16 0.00 0.00 2.24
2758 3196 8.896320 ATTCGTATGCATGTACCATTTTAGTA 57.104 30.769 10.16 0.00 0.00 1.82
2759 3197 8.896320 TTCGTATGCATGTACCATTTTAGTAT 57.104 30.769 10.16 0.00 0.00 2.12
2760 3198 8.305441 TCGTATGCATGTACCATTTTAGTATG 57.695 34.615 10.16 0.00 0.00 2.39
2761 3199 8.145122 TCGTATGCATGTACCATTTTAGTATGA 58.855 33.333 10.16 0.00 0.00 2.15
2762 3200 8.221100 CGTATGCATGTACCATTTTAGTATGAC 58.779 37.037 10.16 0.00 0.00 3.06
2763 3201 9.273016 GTATGCATGTACCATTTTAGTATGACT 57.727 33.333 10.16 0.00 0.00 3.41
2766 3204 9.845740 TGCATGTACCATTTTAGTATGACTATT 57.154 29.630 0.00 0.00 29.64 1.73
2773 3211 9.905713 ACCATTTTAGTATGACTATTCACACAT 57.094 29.630 0.00 0.00 30.89 3.21
2781 3219 9.618890 AGTATGACTATTCACACATTTTAGCAT 57.381 29.630 0.00 0.00 30.89 3.79
2782 3220 9.655769 GTATGACTATTCACACATTTTAGCATG 57.344 33.333 0.00 0.00 33.38 4.06
2783 3221 7.686438 TGACTATTCACACATTTTAGCATGT 57.314 32.000 0.00 0.00 37.93 3.21
2784 3222 8.785329 TGACTATTCACACATTTTAGCATGTA 57.215 30.769 0.00 0.00 35.51 2.29
2785 3223 9.394767 TGACTATTCACACATTTTAGCATGTAT 57.605 29.630 0.00 0.00 35.51 2.29
2786 3224 9.655769 GACTATTCACACATTTTAGCATGTATG 57.344 33.333 0.00 0.00 35.51 2.39
2787 3225 9.177608 ACTATTCACACATTTTAGCATGTATGT 57.822 29.630 0.00 0.00 33.90 2.29
2792 3230 6.193514 CACATTTTAGCATGTATGTGGTCA 57.806 37.500 11.79 0.00 42.45 4.02
2793 3231 6.619744 CACATTTTAGCATGTATGTGGTCAA 58.380 36.000 11.79 0.00 42.45 3.18
2794 3232 7.259882 CACATTTTAGCATGTATGTGGTCAAT 58.740 34.615 11.79 0.00 42.45 2.57
2795 3233 8.404765 CACATTTTAGCATGTATGTGGTCAATA 58.595 33.333 11.79 0.00 42.45 1.90
2796 3234 8.623903 ACATTTTAGCATGTATGTGGTCAATAG 58.376 33.333 0.00 0.00 35.51 1.73
2797 3235 8.623903 CATTTTAGCATGTATGTGGTCAATAGT 58.376 33.333 0.00 0.00 0.00 2.12
2798 3236 8.574251 TTTTAGCATGTATGTGGTCAATAGTT 57.426 30.769 0.00 0.00 0.00 2.24
2799 3237 8.574251 TTTAGCATGTATGTGGTCAATAGTTT 57.426 30.769 0.00 0.00 0.00 2.66
2800 3238 6.441093 AGCATGTATGTGGTCAATAGTTTG 57.559 37.500 0.00 0.00 0.00 2.93
2801 3239 6.179756 AGCATGTATGTGGTCAATAGTTTGA 58.820 36.000 0.00 0.00 39.54 2.69
2802 3240 6.658816 AGCATGTATGTGGTCAATAGTTTGAA 59.341 34.615 0.00 0.00 43.29 2.69
2803 3241 7.176515 AGCATGTATGTGGTCAATAGTTTGAAA 59.823 33.333 0.00 0.00 43.29 2.69
2804 3242 7.975616 GCATGTATGTGGTCAATAGTTTGAAAT 59.024 33.333 0.00 0.00 43.29 2.17
2807 3245 8.673711 TGTATGTGGTCAATAGTTTGAAATAGC 58.326 33.333 0.00 0.00 43.29 2.97
2808 3246 7.944729 ATGTGGTCAATAGTTTGAAATAGCT 57.055 32.000 0.00 0.00 43.29 3.32
2810 3248 8.856153 TGTGGTCAATAGTTTGAAATAGCTAA 57.144 30.769 0.00 0.00 43.29 3.09
2811 3249 9.290988 TGTGGTCAATAGTTTGAAATAGCTAAA 57.709 29.630 0.00 0.00 43.29 1.85
2814 3252 9.788960 GGTCAATAGTTTGAAATAGCTAAAAGG 57.211 33.333 0.00 0.00 43.29 3.11
2831 3269 8.148999 AGCTAAAAGGTCTTATATTAGGGAACG 58.851 37.037 0.00 0.00 0.00 3.95
2832 3270 7.387122 GCTAAAAGGTCTTATATTAGGGAACGG 59.613 40.741 0.00 0.00 0.00 4.44
2833 3271 7.441903 AAAAGGTCTTATATTAGGGAACGGA 57.558 36.000 0.00 0.00 0.00 4.69
2834 3272 6.667558 AAGGTCTTATATTAGGGAACGGAG 57.332 41.667 0.00 0.00 0.00 4.63
2835 3273 5.085219 AGGTCTTATATTAGGGAACGGAGG 58.915 45.833 0.00 0.00 0.00 4.30
2836 3274 4.837298 GGTCTTATATTAGGGAACGGAGGT 59.163 45.833 0.00 0.00 0.00 3.85
2837 3275 6.012745 GGTCTTATATTAGGGAACGGAGGTA 58.987 44.000 0.00 0.00 0.00 3.08
2838 3276 6.152492 GGTCTTATATTAGGGAACGGAGGTAG 59.848 46.154 0.00 0.00 0.00 3.18
2853 3291 6.281405 ACGGAGGTAGTATTTGATCATGTTC 58.719 40.000 0.00 0.00 0.00 3.18
2857 3295 7.308229 GGAGGTAGTATTTGATCATGTTCATGC 60.308 40.741 7.29 0.00 0.00 4.06
2866 3304 3.369242 TCATGTTCATGCTGGGAATCA 57.631 42.857 7.80 0.00 0.00 2.57
2867 3305 3.699413 TCATGTTCATGCTGGGAATCAA 58.301 40.909 7.80 0.00 0.00 2.57
2881 3319 5.151454 TGGGAATCAACACAAATTTAGGGT 58.849 37.500 0.00 0.00 0.00 4.34
2941 3379 9.825972 AATAGAACATTGAAACTAAATGTCACG 57.174 29.630 2.53 0.00 45.25 4.35
2944 3382 4.518970 ACATTGAAACTAAATGTCACGGCT 59.481 37.500 0.00 0.00 43.11 5.52
2949 3387 1.001633 ACTAAATGTCACGGCTCGGTT 59.998 47.619 0.00 0.00 0.00 4.44
2956 3394 0.672401 TCACGGCTCGGTTGAATTCC 60.672 55.000 2.27 0.00 0.00 3.01
2957 3395 0.953471 CACGGCTCGGTTGAATTCCA 60.953 55.000 2.27 0.00 0.00 3.53
2969 3407 8.371770 TCGGTTGAATTCCAAAAATAAAAAGG 57.628 30.769 2.27 0.00 36.36 3.11
2970 3408 7.988028 TCGGTTGAATTCCAAAAATAAAAAGGT 59.012 29.630 2.27 0.00 36.36 3.50
2984 3422 7.484035 AATAAAAAGGTAGATCTCGATGTGC 57.516 36.000 0.00 0.00 0.00 4.57
2988 3426 1.065701 GGTAGATCTCGATGTGCGTGT 59.934 52.381 0.00 0.00 41.80 4.49
2996 3434 1.075542 CGATGTGCGTGTACCAATGT 58.924 50.000 0.00 0.00 34.64 2.71
3003 3441 4.202060 TGTGCGTGTACCAATGTTCAAATT 60.202 37.500 0.00 0.00 0.00 1.82
3020 3458 5.457140 TCAAATTCAACGTTTCACTATGCC 58.543 37.500 0.00 0.00 0.00 4.40
3023 3461 4.742438 TTCAACGTTTCACTATGCCTTC 57.258 40.909 0.00 0.00 0.00 3.46
3024 3462 3.734463 TCAACGTTTCACTATGCCTTCA 58.266 40.909 0.00 0.00 0.00 3.02
3029 3467 3.745975 CGTTTCACTATGCCTTCACAAGA 59.254 43.478 0.00 0.00 0.00 3.02
3039 3477 8.162085 ACTATGCCTTCACAAGAATATGATCAT 58.838 33.333 13.81 13.81 32.31 2.45
3044 3482 6.996879 CCTTCACAAGAATATGATCATCACCT 59.003 38.462 12.53 4.73 32.31 4.00
3048 3486 6.038936 CACAAGAATATGATCATCACCTGCAA 59.961 38.462 12.53 0.00 0.00 4.08
3066 3504 3.441496 CAAATTGTGCAACCTCACTGT 57.559 42.857 0.00 0.00 37.81 3.55
3067 3505 4.566545 CAAATTGTGCAACCTCACTGTA 57.433 40.909 0.00 0.00 37.81 2.74
3068 3506 5.125100 CAAATTGTGCAACCTCACTGTAT 57.875 39.130 0.00 0.00 37.81 2.29
3069 3507 4.771590 AATTGTGCAACCTCACTGTATG 57.228 40.909 0.00 0.00 37.81 2.39
3070 3508 2.928801 TGTGCAACCTCACTGTATGT 57.071 45.000 0.00 0.00 37.81 2.29
3071 3509 2.493035 TGTGCAACCTCACTGTATGTG 58.507 47.619 0.00 0.00 41.85 3.21
3072 3510 2.103941 TGTGCAACCTCACTGTATGTGA 59.896 45.455 0.00 0.00 45.08 3.58
3073 3511 3.244526 TGTGCAACCTCACTGTATGTGAT 60.245 43.478 0.00 0.00 44.62 3.06
3074 3512 4.020662 TGTGCAACCTCACTGTATGTGATA 60.021 41.667 0.00 0.00 44.62 2.15
3075 3513 5.338300 TGTGCAACCTCACTGTATGTGATAT 60.338 40.000 0.00 0.00 44.62 1.63
3076 3514 6.800229 TGTGCAACCTCACTGTATGTGATATT 60.800 38.462 0.00 0.00 44.62 1.28
3077 3515 8.749179 TGTGCAACCTCACTGTATGTGATATTG 61.749 40.741 13.28 13.28 44.62 1.90
3085 3523 5.284864 ACTGTATGTGATATTGAGAGCACG 58.715 41.667 0.00 0.00 34.12 5.34
3086 3524 4.620982 TGTATGTGATATTGAGAGCACGG 58.379 43.478 0.00 0.00 34.12 4.94
3087 3525 3.827008 ATGTGATATTGAGAGCACGGT 57.173 42.857 0.00 0.00 34.12 4.83
3088 3526 4.937201 ATGTGATATTGAGAGCACGGTA 57.063 40.909 0.00 0.00 34.12 4.02
3089 3527 4.937201 TGTGATATTGAGAGCACGGTAT 57.063 40.909 0.00 0.00 34.12 2.73
3090 3528 4.871513 TGTGATATTGAGAGCACGGTATC 58.128 43.478 0.00 0.00 34.12 2.24
3091 3529 4.238514 GTGATATTGAGAGCACGGTATCC 58.761 47.826 0.00 0.00 0.00 2.59
3092 3530 3.895041 TGATATTGAGAGCACGGTATCCA 59.105 43.478 0.00 0.00 0.00 3.41
3093 3531 2.604046 ATTGAGAGCACGGTATCCAC 57.396 50.000 0.00 0.00 0.00 4.02
3094 3532 0.535335 TTGAGAGCACGGTATCCACC 59.465 55.000 0.00 0.00 41.93 4.61
3095 3533 0.613572 TGAGAGCACGGTATCCACCA 60.614 55.000 0.00 0.00 46.14 4.17
3096 3534 0.103208 GAGAGCACGGTATCCACCAG 59.897 60.000 0.00 0.00 46.14 4.00
3097 3535 1.521681 GAGCACGGTATCCACCAGC 60.522 63.158 0.00 0.00 46.14 4.85
3098 3536 2.238847 GAGCACGGTATCCACCAGCA 62.239 60.000 9.88 0.00 46.14 4.41
3099 3537 1.376683 GCACGGTATCCACCAGCAA 60.377 57.895 4.03 0.00 46.14 3.91
3100 3538 0.958382 GCACGGTATCCACCAGCAAA 60.958 55.000 4.03 0.00 46.14 3.68
3101 3539 0.802494 CACGGTATCCACCAGCAAAC 59.198 55.000 0.00 0.00 46.14 2.93
3102 3540 0.690762 ACGGTATCCACCAGCAAACT 59.309 50.000 0.00 0.00 46.14 2.66
3103 3541 1.073284 ACGGTATCCACCAGCAAACTT 59.927 47.619 0.00 0.00 46.14 2.66
3104 3542 1.468520 CGGTATCCACCAGCAAACTTG 59.531 52.381 0.00 0.00 46.14 3.16
3105 3543 2.514803 GGTATCCACCAGCAAACTTGT 58.485 47.619 0.00 0.00 45.04 3.16
3106 3544 2.890945 GGTATCCACCAGCAAACTTGTT 59.109 45.455 0.00 0.00 45.04 2.83
3107 3545 3.320826 GGTATCCACCAGCAAACTTGTTT 59.679 43.478 0.00 0.00 45.04 2.83
3108 3546 2.957491 TCCACCAGCAAACTTGTTTG 57.043 45.000 18.60 18.60 35.15 2.93
3109 3547 2.451490 TCCACCAGCAAACTTGTTTGA 58.549 42.857 24.85 4.42 33.95 2.69
3110 3548 2.828520 TCCACCAGCAAACTTGTTTGAA 59.171 40.909 24.85 3.38 33.95 2.69
3111 3549 2.929398 CCACCAGCAAACTTGTTTGAAC 59.071 45.455 24.85 11.53 33.95 3.18
3112 3550 3.368323 CCACCAGCAAACTTGTTTGAACT 60.368 43.478 24.85 13.26 33.95 3.01
3113 3551 3.613737 CACCAGCAAACTTGTTTGAACTG 59.386 43.478 24.85 21.15 33.95 3.16
3114 3552 3.258123 ACCAGCAAACTTGTTTGAACTGT 59.742 39.130 24.85 14.38 33.95 3.55
3115 3553 4.244862 CCAGCAAACTTGTTTGAACTGTT 58.755 39.130 24.85 0.00 33.95 3.16
3116 3554 5.047660 ACCAGCAAACTTGTTTGAACTGTTA 60.048 36.000 24.85 0.00 33.95 2.41
3117 3555 6.042143 CCAGCAAACTTGTTTGAACTGTTAT 58.958 36.000 24.85 2.60 33.95 1.89
3118 3556 6.019640 CCAGCAAACTTGTTTGAACTGTTATG 60.020 38.462 24.85 10.14 33.95 1.90
3119 3557 6.751425 CAGCAAACTTGTTTGAACTGTTATGA 59.249 34.615 24.85 0.00 33.95 2.15
3120 3558 7.275341 CAGCAAACTTGTTTGAACTGTTATGAA 59.725 33.333 24.85 0.00 33.95 2.57
3121 3559 7.981225 AGCAAACTTGTTTGAACTGTTATGAAT 59.019 29.630 24.85 0.00 33.95 2.57
3122 3560 9.243637 GCAAACTTGTTTGAACTGTTATGAATA 57.756 29.630 24.85 0.00 33.95 1.75
3125 3563 8.970691 ACTTGTTTGAACTGTTATGAATATGC 57.029 30.769 0.00 0.00 0.00 3.14
3126 3564 8.575589 ACTTGTTTGAACTGTTATGAATATGCA 58.424 29.630 0.00 0.00 0.00 3.96
3127 3565 9.409312 CTTGTTTGAACTGTTATGAATATGCAA 57.591 29.630 0.00 0.00 0.00 4.08
3128 3566 8.741101 TGTTTGAACTGTTATGAATATGCAAC 57.259 30.769 0.00 0.00 0.00 4.17
3129 3567 8.575589 TGTTTGAACTGTTATGAATATGCAACT 58.424 29.630 0.00 0.00 0.00 3.16
3130 3568 9.410556 GTTTGAACTGTTATGAATATGCAACTT 57.589 29.630 0.00 0.00 0.00 2.66
3131 3569 8.969121 TTGAACTGTTATGAATATGCAACTTG 57.031 30.769 0.00 0.00 0.00 3.16
3132 3570 8.109705 TGAACTGTTATGAATATGCAACTTGT 57.890 30.769 0.00 0.00 0.00 3.16
3133 3571 9.225436 TGAACTGTTATGAATATGCAACTTGTA 57.775 29.630 0.00 0.00 0.00 2.41
3147 3585 8.630054 ATGCAACTTGTATTACTAAAAGGTCA 57.370 30.769 0.00 0.00 0.00 4.02
3148 3586 8.453238 TGCAACTTGTATTACTAAAAGGTCAA 57.547 30.769 0.00 0.00 0.00 3.18
3149 3587 8.904834 TGCAACTTGTATTACTAAAAGGTCAAA 58.095 29.630 0.00 0.00 0.00 2.69
3150 3588 9.394477 GCAACTTGTATTACTAAAAGGTCAAAG 57.606 33.333 0.00 0.00 0.00 2.77
3151 3589 9.394477 CAACTTGTATTACTAAAAGGTCAAAGC 57.606 33.333 0.00 0.00 0.00 3.51
3152 3590 8.685838 ACTTGTATTACTAAAAGGTCAAAGCA 57.314 30.769 0.00 0.00 0.00 3.91
3153 3591 9.127277 ACTTGTATTACTAAAAGGTCAAAGCAA 57.873 29.630 0.00 0.00 0.00 3.91
3154 3592 9.612620 CTTGTATTACTAAAAGGTCAAAGCAAG 57.387 33.333 0.00 0.00 0.00 4.01
3155 3593 7.590279 TGTATTACTAAAAGGTCAAAGCAAGC 58.410 34.615 0.00 0.00 0.00 4.01
3156 3594 6.648879 ATTACTAAAAGGTCAAAGCAAGCA 57.351 33.333 0.00 0.00 0.00 3.91
3157 3595 6.648879 TTACTAAAAGGTCAAAGCAAGCAT 57.351 33.333 0.00 0.00 0.00 3.79
3158 3596 7.753309 TTACTAAAAGGTCAAAGCAAGCATA 57.247 32.000 0.00 0.00 0.00 3.14
3159 3597 6.840780 ACTAAAAGGTCAAAGCAAGCATAT 57.159 33.333 0.00 0.00 0.00 1.78
3160 3598 7.938140 ACTAAAAGGTCAAAGCAAGCATATA 57.062 32.000 0.00 0.00 0.00 0.86
3161 3599 8.525290 ACTAAAAGGTCAAAGCAAGCATATAT 57.475 30.769 0.00 0.00 0.00 0.86
3162 3600 9.627123 ACTAAAAGGTCAAAGCAAGCATATATA 57.373 29.630 0.00 0.00 0.00 0.86
3163 3601 9.884465 CTAAAAGGTCAAAGCAAGCATATATAC 57.116 33.333 0.00 0.00 0.00 1.47
3164 3602 7.880160 AAAGGTCAAAGCAAGCATATATACA 57.120 32.000 0.00 0.00 0.00 2.29
3165 3603 7.880160 AAGGTCAAAGCAAGCATATATACAA 57.120 32.000 0.00 0.00 0.00 2.41
3166 3604 7.880160 AGGTCAAAGCAAGCATATATACAAA 57.120 32.000 0.00 0.00 0.00 2.83
3167 3605 8.292444 AGGTCAAAGCAAGCATATATACAAAA 57.708 30.769 0.00 0.00 0.00 2.44
3168 3606 8.408601 AGGTCAAAGCAAGCATATATACAAAAG 58.591 33.333 0.00 0.00 0.00 2.27
3169 3607 8.405531 GGTCAAAGCAAGCATATATACAAAAGA 58.594 33.333 0.00 0.00 0.00 2.52
3418 3856 5.892524 TCATGATGGATCCACAATACTGA 57.107 39.130 18.99 13.80 0.00 3.41
3419 3857 5.861727 TCATGATGGATCCACAATACTGAG 58.138 41.667 18.99 1.83 0.00 3.35
3420 3858 5.367644 TCATGATGGATCCACAATACTGAGT 59.632 40.000 18.99 0.00 0.00 3.41
3421 3859 5.698741 TGATGGATCCACAATACTGAGTT 57.301 39.130 18.99 0.00 0.00 3.01
3422 3860 6.065976 TGATGGATCCACAATACTGAGTTT 57.934 37.500 18.99 0.00 0.00 2.66
3423 3861 5.882000 TGATGGATCCACAATACTGAGTTTG 59.118 40.000 18.99 0.00 0.00 2.93
3424 3862 4.588899 TGGATCCACAATACTGAGTTTGG 58.411 43.478 11.44 0.00 0.00 3.28
3425 3863 4.288366 TGGATCCACAATACTGAGTTTGGA 59.712 41.667 11.44 7.19 37.54 3.53
3426 3864 4.878397 GGATCCACAATACTGAGTTTGGAG 59.122 45.833 6.95 4.35 36.60 3.86
3427 3865 5.338381 GGATCCACAATACTGAGTTTGGAGA 60.338 44.000 6.95 7.27 36.60 3.71
3428 3866 5.152623 TCCACAATACTGAGTTTGGAGAG 57.847 43.478 0.00 0.00 0.00 3.20
3429 3867 4.020218 TCCACAATACTGAGTTTGGAGAGG 60.020 45.833 0.00 0.00 0.00 3.69
3430 3868 4.263068 CCACAATACTGAGTTTGGAGAGGT 60.263 45.833 0.00 0.00 0.00 3.85
3431 3869 4.692625 CACAATACTGAGTTTGGAGAGGTG 59.307 45.833 0.00 0.00 0.00 4.00
3432 3870 4.593206 ACAATACTGAGTTTGGAGAGGTGA 59.407 41.667 0.00 0.00 0.00 4.02
3433 3871 5.071788 ACAATACTGAGTTTGGAGAGGTGAA 59.928 40.000 0.00 0.00 0.00 3.18
3434 3872 5.825593 ATACTGAGTTTGGAGAGGTGAAA 57.174 39.130 0.00 0.00 0.00 2.69
3435 3873 4.713792 ACTGAGTTTGGAGAGGTGAAAT 57.286 40.909 0.00 0.00 0.00 2.17
3436 3874 4.646572 ACTGAGTTTGGAGAGGTGAAATC 58.353 43.478 0.00 0.00 0.00 2.17
3437 3875 4.349342 ACTGAGTTTGGAGAGGTGAAATCT 59.651 41.667 0.00 0.00 0.00 2.40
3438 3876 5.544176 ACTGAGTTTGGAGAGGTGAAATCTA 59.456 40.000 0.00 0.00 0.00 1.98
3439 3877 6.214412 ACTGAGTTTGGAGAGGTGAAATCTAT 59.786 38.462 0.00 0.00 0.00 1.98
3440 3878 6.409704 TGAGTTTGGAGAGGTGAAATCTATG 58.590 40.000 0.00 0.00 0.00 2.23
3441 3879 6.013379 TGAGTTTGGAGAGGTGAAATCTATGT 60.013 38.462 0.00 0.00 0.00 2.29
3442 3880 6.784031 AGTTTGGAGAGGTGAAATCTATGTT 58.216 36.000 0.00 0.00 0.00 2.71
3443 3881 6.656693 AGTTTGGAGAGGTGAAATCTATGTTG 59.343 38.462 0.00 0.00 0.00 3.33
3444 3882 4.517285 TGGAGAGGTGAAATCTATGTTGC 58.483 43.478 0.00 0.00 0.00 4.17
3445 3883 3.557595 GGAGAGGTGAAATCTATGTTGCG 59.442 47.826 0.00 0.00 0.00 4.85
3446 3884 4.184629 GAGAGGTGAAATCTATGTTGCGT 58.815 43.478 0.00 0.00 0.00 5.24
3447 3885 4.579869 AGAGGTGAAATCTATGTTGCGTT 58.420 39.130 0.00 0.00 0.00 4.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 1.535462 CGGCGGTGATGAAAAACTTCT 59.465 47.619 0.00 0.00 0.00 2.85
12 13 1.533731 TCGGCGGTGATGAAAAACTTC 59.466 47.619 7.21 0.00 0.00 3.01
44 45 4.848757 ACGCACTTTCAGAGTTTCAATTC 58.151 39.130 0.00 0.00 36.10 2.17
47 48 4.506654 GTCTACGCACTTTCAGAGTTTCAA 59.493 41.667 0.00 0.00 36.10 2.69
173 218 4.104086 TGTTGTCTCCATTAGAGGTCCAT 58.896 43.478 0.00 0.00 43.44 3.41
181 226 4.503910 TCGGTTGATGTTGTCTCCATTAG 58.496 43.478 0.00 0.00 0.00 1.73
278 323 4.863180 GCATCTGCTTTTGGGAGACCCT 62.863 54.545 8.34 0.00 44.89 4.34
279 324 2.561547 GCATCTGCTTTTGGGAGACCC 61.562 57.143 0.00 0.00 44.89 4.46
357 417 2.642807 CTGGGAAAGAAGAAGGGTGGTA 59.357 50.000 0.00 0.00 0.00 3.25
361 421 2.418669 TCACTGGGAAAGAAGAAGGGT 58.581 47.619 0.00 0.00 0.00 4.34
405 465 6.546972 AGTTTGGAATCTCGTCTTCTTTTC 57.453 37.500 0.00 0.00 0.00 2.29
423 483 3.875134 ACTCGAGTTGGTGGTAAAGTTTG 59.125 43.478 13.58 0.00 0.00 2.93
424 484 4.146745 ACTCGAGTTGGTGGTAAAGTTT 57.853 40.909 13.58 0.00 0.00 2.66
464 532 4.846779 TCATGCAGTTGTTCTTTAACCC 57.153 40.909 0.00 0.00 34.49 4.11
465 533 9.503427 GTATAATCATGCAGTTGTTCTTTAACC 57.497 33.333 0.00 0.00 34.49 2.85
482 550 8.152246 CCCATTTTTGCATCTTGGTATAATCAT 58.848 33.333 0.00 0.00 0.00 2.45
497 583 3.902881 AAGAACACACCCATTTTTGCA 57.097 38.095 0.00 0.00 0.00 4.08
498 584 4.201901 CCAAAAGAACACACCCATTTTTGC 60.202 41.667 0.00 0.00 35.37 3.68
499 585 4.335037 CCCAAAAGAACACACCCATTTTTG 59.665 41.667 0.00 0.00 36.06 2.44
501 587 3.777522 TCCCAAAAGAACACACCCATTTT 59.222 39.130 0.00 0.00 0.00 1.82
502 588 3.379452 TCCCAAAAGAACACACCCATTT 58.621 40.909 0.00 0.00 0.00 2.32
504 590 2.765689 TCCCAAAAGAACACACCCAT 57.234 45.000 0.00 0.00 0.00 4.00
505 591 2.383855 CTTCCCAAAAGAACACACCCA 58.616 47.619 0.00 0.00 0.00 4.51
506 592 1.686587 CCTTCCCAAAAGAACACACCC 59.313 52.381 0.00 0.00 0.00 4.61
507 593 2.661718 TCCTTCCCAAAAGAACACACC 58.338 47.619 0.00 0.00 0.00 4.16
508 594 4.937201 AATCCTTCCCAAAAGAACACAC 57.063 40.909 0.00 0.00 0.00 3.82
509 595 4.714308 ACAAATCCTTCCCAAAAGAACACA 59.286 37.500 0.00 0.00 0.00 3.72
510 596 5.049828 CACAAATCCTTCCCAAAAGAACAC 58.950 41.667 0.00 0.00 0.00 3.32
511 597 4.714308 ACACAAATCCTTCCCAAAAGAACA 59.286 37.500 0.00 0.00 0.00 3.18
512 598 5.049828 CACACAAATCCTTCCCAAAAGAAC 58.950 41.667 0.00 0.00 0.00 3.01
513 599 4.714308 ACACACAAATCCTTCCCAAAAGAA 59.286 37.500 0.00 0.00 0.00 2.52
514 600 4.285863 ACACACAAATCCTTCCCAAAAGA 58.714 39.130 0.00 0.00 0.00 2.52
515 601 4.099266 TGACACACAAATCCTTCCCAAAAG 59.901 41.667 0.00 0.00 0.00 2.27
516 602 4.026744 TGACACACAAATCCTTCCCAAAA 58.973 39.130 0.00 0.00 0.00 2.44
517 603 3.636679 TGACACACAAATCCTTCCCAAA 58.363 40.909 0.00 0.00 0.00 3.28
518 604 3.304911 TGACACACAAATCCTTCCCAA 57.695 42.857 0.00 0.00 0.00 4.12
519 605 3.074390 AGATGACACACAAATCCTTCCCA 59.926 43.478 0.00 0.00 0.00 4.37
520 606 3.690460 AGATGACACACAAATCCTTCCC 58.310 45.455 0.00 0.00 0.00 3.97
521 607 4.394300 CAGAGATGACACACAAATCCTTCC 59.606 45.833 0.00 0.00 0.00 3.46
522 608 5.121454 GTCAGAGATGACACACAAATCCTTC 59.879 44.000 3.58 0.00 38.59 3.46
523 609 4.999950 GTCAGAGATGACACACAAATCCTT 59.000 41.667 3.58 0.00 38.59 3.36
524 610 4.573900 GTCAGAGATGACACACAAATCCT 58.426 43.478 3.58 0.00 38.59 3.24
525 611 3.369147 CGTCAGAGATGACACACAAATCC 59.631 47.826 8.91 0.00 38.65 3.01
526 612 4.237724 TCGTCAGAGATGACACACAAATC 58.762 43.478 8.91 0.00 38.65 2.17
527 613 4.257267 TCGTCAGAGATGACACACAAAT 57.743 40.909 8.91 0.00 38.65 2.32
528 614 3.726291 TCGTCAGAGATGACACACAAA 57.274 42.857 8.91 0.00 38.65 2.83
546 632 2.678324 GGTTCTCCTCTGTTCTGTTCG 58.322 52.381 0.00 0.00 0.00 3.95
555 641 0.741915 GCTCTACCGGTTCTCCTCTG 59.258 60.000 15.04 0.00 0.00 3.35
559 645 0.741915 CTCAGCTCTACCGGTTCTCC 59.258 60.000 15.04 0.00 0.00 3.71
560 646 1.752683 TCTCAGCTCTACCGGTTCTC 58.247 55.000 15.04 0.00 0.00 2.87
561 647 2.217510 TTCTCAGCTCTACCGGTTCT 57.782 50.000 15.04 2.03 0.00 3.01
563 649 3.633418 ACTATTCTCAGCTCTACCGGTT 58.367 45.455 15.04 0.00 0.00 4.44
564 650 3.300239 ACTATTCTCAGCTCTACCGGT 57.700 47.619 13.98 13.98 0.00 5.28
565 651 4.579340 TGTTACTATTCTCAGCTCTACCGG 59.421 45.833 0.00 0.00 0.00 5.28
566 652 5.527951 TCTGTTACTATTCTCAGCTCTACCG 59.472 44.000 0.00 0.00 0.00 4.02
567 653 6.514376 GCTCTGTTACTATTCTCAGCTCTACC 60.514 46.154 0.00 0.00 0.00 3.18
568 654 6.038825 TGCTCTGTTACTATTCTCAGCTCTAC 59.961 42.308 0.00 0.00 0.00 2.59
569 655 6.122964 TGCTCTGTTACTATTCTCAGCTCTA 58.877 40.000 0.00 0.00 0.00 2.43
570 656 4.952957 TGCTCTGTTACTATTCTCAGCTCT 59.047 41.667 0.00 0.00 0.00 4.09
582 668 2.965831 TCTTCACCACTGCTCTGTTACT 59.034 45.455 0.00 0.00 0.00 2.24
600 686 1.396996 GTGTTGTGTTGTGAGCGTCTT 59.603 47.619 0.00 0.00 0.00 3.01
626 712 2.223947 TGTACCGTCGATGATTGATGGG 60.224 50.000 21.89 12.12 45.10 4.00
628 714 6.808704 AGAATATGTACCGTCGATGATTGATG 59.191 38.462 6.11 0.00 0.00 3.07
660 746 2.731341 GCTACATACAGTTCGACGCACT 60.731 50.000 0.00 0.00 0.00 4.40
668 754 6.368791 TGTGACAAAGATGCTACATACAGTTC 59.631 38.462 0.00 0.00 0.00 3.01
676 1007 5.610398 TCTCTTTGTGACAAAGATGCTACA 58.390 37.500 33.18 15.03 35.90 2.74
705 1036 7.438459 CCCTTCTTATTCGTCTGGTAAAGTATG 59.562 40.741 0.00 0.00 0.00 2.39
801 1132 8.868522 TTCCTTCATGATGGCTTATAATTAGG 57.131 34.615 20.32 8.54 0.00 2.69
857 1199 1.716028 AAGGTGGGGTGAGTTGGGAC 61.716 60.000 0.00 0.00 0.00 4.46
862 1204 0.187606 GGGAAAAGGTGGGGTGAGTT 59.812 55.000 0.00 0.00 0.00 3.01
871 1213 1.412343 CAAAGGTGGTGGGAAAAGGTG 59.588 52.381 0.00 0.00 0.00 4.00
872 1214 1.691163 CCAAAGGTGGTGGGAAAAGGT 60.691 52.381 0.00 0.00 40.42 3.50
908 1261 2.108970 GGGTTAGGGAGACGAGACATT 58.891 52.381 0.00 0.00 0.00 2.71
909 1262 1.288335 AGGGTTAGGGAGACGAGACAT 59.712 52.381 0.00 0.00 0.00 3.06
924 1277 0.319405 GAGCTTTGCAATGCAGGGTT 59.681 50.000 31.53 15.81 40.61 4.11
967 1321 1.416772 GGGTCGGGGAATAGGAGAAAG 59.583 57.143 0.00 0.00 0.00 2.62
989 1343 3.717695 TATTTTGTCCGCGGGTGAGGG 62.718 57.143 27.83 0.00 35.46 4.30
994 1348 1.944709 GCTATTATTTTGTCCGCGGGT 59.055 47.619 27.83 7.28 0.00 5.28
1040 1394 2.031420 CAGTTCAGTCAGTGCAACCATG 60.031 50.000 0.00 0.00 37.80 3.66
1093 1448 4.130286 AGTGTGGATTGAGCTAGCTTAC 57.870 45.455 20.42 7.66 0.00 2.34
1106 1461 1.210478 AGGCGCTTATCAAGTGTGGAT 59.790 47.619 7.64 0.00 41.04 3.41
1123 1478 3.763897 ACAGAGAGAGAGAGAGAAAAGGC 59.236 47.826 0.00 0.00 0.00 4.35
1124 1479 4.766891 ACACAGAGAGAGAGAGAGAAAAGG 59.233 45.833 0.00 0.00 0.00 3.11
1131 1486 2.909662 TGGAGACACAGAGAGAGAGAGA 59.090 50.000 0.00 0.00 33.40 3.10
1132 1487 3.348647 TGGAGACACAGAGAGAGAGAG 57.651 52.381 0.00 0.00 33.40 3.20
1133 1488 3.073798 ACTTGGAGACACAGAGAGAGAGA 59.926 47.826 0.00 0.00 42.67 3.10
1134 1489 3.191162 CACTTGGAGACACAGAGAGAGAG 59.809 52.174 0.00 0.00 42.67 3.20
1135 1490 3.153130 CACTTGGAGACACAGAGAGAGA 58.847 50.000 0.00 0.00 42.67 3.10
1136 1491 2.230992 CCACTTGGAGACACAGAGAGAG 59.769 54.545 0.00 0.00 42.67 3.20
1137 1492 2.242926 CCACTTGGAGACACAGAGAGA 58.757 52.381 0.00 0.00 42.67 3.10
1138 1493 1.967066 ACCACTTGGAGACACAGAGAG 59.033 52.381 1.14 0.00 42.67 3.20
1144 1499 1.692519 ACCTACACCACTTGGAGACAC 59.307 52.381 1.14 0.00 38.72 3.67
1220 1584 1.970352 GCAGAGGAGAGGAAGCAGGG 61.970 65.000 0.00 0.00 0.00 4.45
1252 1616 1.274728 GAGAGTGCTGGAGCTGAGAAA 59.725 52.381 0.00 0.00 42.66 2.52
1263 1627 3.791973 ATAGAGTTTCGGAGAGTGCTG 57.208 47.619 0.00 0.00 38.43 4.41
1265 1629 5.802956 GCATATATAGAGTTTCGGAGAGTGC 59.197 44.000 0.00 0.00 38.43 4.40
1266 1630 6.024664 CGCATATATAGAGTTTCGGAGAGTG 58.975 44.000 0.00 0.00 38.43 3.51
1273 1637 6.670990 AACGAACGCATATATAGAGTTTCG 57.329 37.500 13.58 13.58 0.00 3.46
1274 1638 9.354544 GAAAAACGAACGCATATATAGAGTTTC 57.645 33.333 0.00 0.00 0.00 2.78
1277 1641 7.705325 ACTGAAAAACGAACGCATATATAGAGT 59.295 33.333 0.00 0.00 0.00 3.24
1278 1642 8.062231 ACTGAAAAACGAACGCATATATAGAG 57.938 34.615 0.00 0.00 0.00 2.43
1279 1643 7.997107 ACTGAAAAACGAACGCATATATAGA 57.003 32.000 0.00 0.00 0.00 1.98
1280 1644 7.582679 CCAACTGAAAAACGAACGCATATATAG 59.417 37.037 0.00 0.00 0.00 1.31
1285 1654 3.312973 ACCAACTGAAAAACGAACGCATA 59.687 39.130 0.00 0.00 0.00 3.14
1296 1665 5.181748 CAAAACCATCCAACCAACTGAAAA 58.818 37.500 0.00 0.00 0.00 2.29
1298 1667 3.772025 ACAAAACCATCCAACCAACTGAA 59.228 39.130 0.00 0.00 0.00 3.02
1309 1678 2.223711 ACAGCACGAAACAAAACCATCC 60.224 45.455 0.00 0.00 0.00 3.51
1310 1679 3.078594 ACAGCACGAAACAAAACCATC 57.921 42.857 0.00 0.00 0.00 3.51
1311 1680 3.518634 AACAGCACGAAACAAAACCAT 57.481 38.095 0.00 0.00 0.00 3.55
1312 1681 2.989840 CAAACAGCACGAAACAAAACCA 59.010 40.909 0.00 0.00 0.00 3.67
1313 1682 2.347150 CCAAACAGCACGAAACAAAACC 59.653 45.455 0.00 0.00 0.00 3.27
1314 1683 2.990514 ACCAAACAGCACGAAACAAAAC 59.009 40.909 0.00 0.00 0.00 2.43
1320 1689 2.600731 CAACAACCAAACAGCACGAAA 58.399 42.857 0.00 0.00 0.00 3.46
1322 1691 0.453793 CCAACAACCAAACAGCACGA 59.546 50.000 0.00 0.00 0.00 4.35
1323 1692 0.453793 TCCAACAACCAAACAGCACG 59.546 50.000 0.00 0.00 0.00 5.34
1325 1694 0.459489 GCTCCAACAACCAAACAGCA 59.541 50.000 0.00 0.00 0.00 4.41
1326 1695 0.746659 AGCTCCAACAACCAAACAGC 59.253 50.000 0.00 0.00 0.00 4.40
1347 1716 1.178276 ACTACTGGCACTCTCTTCGG 58.822 55.000 0.00 0.00 0.00 4.30
1490 1860 4.677378 ACGAATTCGATCTCGCTATCTTTG 59.323 41.667 33.05 0.00 43.02 2.77
1493 1863 3.816091 CACGAATTCGATCTCGCTATCT 58.184 45.455 33.05 4.07 43.02 1.98
1498 1868 0.228238 CAGCACGAATTCGATCTCGC 59.772 55.000 33.05 23.37 43.02 5.03
1499 1869 1.778026 CTCAGCACGAATTCGATCTCG 59.222 52.381 33.05 19.78 43.02 4.04
1500 1870 2.803451 ACTCAGCACGAATTCGATCTC 58.197 47.619 33.05 17.42 43.02 2.75
1519 1904 1.940613 ACAGCTCGAACCAAACTGAAC 59.059 47.619 0.00 0.00 32.67 3.18
1539 1932 0.752009 ATGCTCGAACCCTCTCGCTA 60.752 55.000 0.00 0.00 38.73 4.26
1615 2014 3.785859 TCCAGCTCCGGCATGTCC 61.786 66.667 0.00 0.00 41.70 4.02
1665 2064 1.602323 GGCATCGGTGTTGGGTTCA 60.602 57.895 0.00 0.00 0.00 3.18
1969 2368 1.127567 ACTTGCAGGAGGTGGTGCTA 61.128 55.000 1.40 0.00 40.54 3.49
2016 2415 5.708736 TGCCTAGTTAGGAATTGATGGAA 57.291 39.130 9.39 0.00 46.63 3.53
2017 2416 5.456619 CCATGCCTAGTTAGGAATTGATGGA 60.457 44.000 9.39 0.00 46.63 3.41
2018 2417 4.763793 CCATGCCTAGTTAGGAATTGATGG 59.236 45.833 9.39 7.51 46.63 3.51
2019 2418 5.240183 CACCATGCCTAGTTAGGAATTGATG 59.760 44.000 9.39 0.00 46.63 3.07
2020 2419 5.380043 CACCATGCCTAGTTAGGAATTGAT 58.620 41.667 9.39 0.00 46.63 2.57
2021 2420 4.780815 CACCATGCCTAGTTAGGAATTGA 58.219 43.478 9.39 0.00 46.63 2.57
2022 2421 3.316308 GCACCATGCCTAGTTAGGAATTG 59.684 47.826 9.39 2.84 46.63 2.32
2023 2422 3.053693 TGCACCATGCCTAGTTAGGAATT 60.054 43.478 9.39 0.00 46.63 2.17
2225 2628 1.346068 GACATGGACCCATAGAGAGGC 59.654 57.143 0.55 0.00 34.91 4.70
2285 2688 1.035385 TCTTGCTGCCTGGCATCATG 61.035 55.000 24.19 24.30 42.09 3.07
2294 2697 2.358003 GTCGTGCTCTTGCTGCCT 60.358 61.111 0.00 0.00 40.48 4.75
2434 2840 4.753516 TGTTCAACAGAGTCCTCTTCAA 57.246 40.909 0.00 0.00 37.98 2.69
2444 2850 3.781079 TTTGGTGCTTGTTCAACAGAG 57.219 42.857 0.00 0.00 34.80 3.35
2473 2879 0.962356 ATGGCGCCTCCTCTGTTTTG 60.962 55.000 29.70 0.00 35.26 2.44
2494 2900 0.170561 CATTGCCACTCTGCTTCTGC 59.829 55.000 0.00 0.00 40.20 4.26
2507 2913 0.462581 TCTGCTCGATGACCATTGCC 60.463 55.000 0.00 0.00 0.00 4.52
2515 2929 2.033424 CGACTACCAATCTGCTCGATGA 59.967 50.000 0.00 0.00 31.20 2.92
2518 2939 1.400846 GACGACTACCAATCTGCTCGA 59.599 52.381 0.00 0.00 0.00 4.04
2521 2942 2.164624 GACTGACGACTACCAATCTGCT 59.835 50.000 0.00 0.00 0.00 4.24
2526 2947 2.891580 ACACTGACTGACGACTACCAAT 59.108 45.455 0.00 0.00 0.00 3.16
2527 2948 2.304092 ACACTGACTGACGACTACCAA 58.696 47.619 0.00 0.00 0.00 3.67
2535 2957 3.494626 AGTATTTGCAACACTGACTGACG 59.505 43.478 11.20 0.00 0.00 4.35
2556 2978 4.480541 CTGACACTGACTACAGCTACAAG 58.519 47.826 0.00 0.00 46.95 3.16
2592 3014 0.593128 AAACATCGCACCTGAAGCAC 59.407 50.000 0.00 0.00 0.00 4.40
2593 3015 0.592637 CAAACATCGCACCTGAAGCA 59.407 50.000 0.00 0.00 0.00 3.91
2594 3016 0.593128 ACAAACATCGCACCTGAAGC 59.407 50.000 0.00 0.00 0.00 3.86
2595 3017 3.067106 AGTACAAACATCGCACCTGAAG 58.933 45.455 0.00 0.00 0.00 3.02
2596 3018 3.120321 AGTACAAACATCGCACCTGAA 57.880 42.857 0.00 0.00 0.00 3.02
2597 3019 2.831685 AGTACAAACATCGCACCTGA 57.168 45.000 0.00 0.00 0.00 3.86
2598 3020 3.585862 AGTAGTACAAACATCGCACCTG 58.414 45.455 2.52 0.00 0.00 4.00
2599 3021 3.955650 AGTAGTACAAACATCGCACCT 57.044 42.857 2.52 0.00 0.00 4.00
2600 3022 3.424433 GCAAGTAGTACAAACATCGCACC 60.424 47.826 2.52 0.00 0.00 5.01
2601 3023 3.185594 TGCAAGTAGTACAAACATCGCAC 59.814 43.478 2.52 0.00 0.00 5.34
2602 3024 3.394719 TGCAAGTAGTACAAACATCGCA 58.605 40.909 2.52 1.05 0.00 5.10
2603 3025 4.334443 CATGCAAGTAGTACAAACATCGC 58.666 43.478 2.52 0.00 0.00 4.58
2604 3026 4.727734 GCCATGCAAGTAGTACAAACATCG 60.728 45.833 2.52 0.00 0.00 3.84
2605 3027 4.155826 TGCCATGCAAGTAGTACAAACATC 59.844 41.667 2.52 0.00 34.76 3.06
2672 3110 3.691609 GGGAGTAGATGCCAAAGAACTTG 59.308 47.826 0.00 0.00 39.77 3.16
2673 3111 3.589288 AGGGAGTAGATGCCAAAGAACTT 59.411 43.478 0.00 0.00 43.31 2.66
2674 3112 3.185455 AGGGAGTAGATGCCAAAGAACT 58.815 45.455 0.00 0.00 43.31 3.01
2675 3113 3.536570 GAGGGAGTAGATGCCAAAGAAC 58.463 50.000 0.00 0.00 43.31 3.01
2677 3115 2.119495 GGAGGGAGTAGATGCCAAAGA 58.881 52.381 0.00 0.00 43.31 2.52
2678 3116 1.202580 CGGAGGGAGTAGATGCCAAAG 60.203 57.143 0.00 0.00 43.31 2.77
2680 3118 0.325296 ACGGAGGGAGTAGATGCCAA 60.325 55.000 0.00 0.00 43.31 4.52
2682 3120 1.340568 GTAACGGAGGGAGTAGATGCC 59.659 57.143 0.00 0.00 40.48 4.40
2683 3121 2.308690 AGTAACGGAGGGAGTAGATGC 58.691 52.381 0.00 0.00 0.00 3.91
2684 3122 6.651975 ATTAAGTAACGGAGGGAGTAGATG 57.348 41.667 0.00 0.00 0.00 2.90
2690 3128 9.857957 GATCTTTATATTAAGTAACGGAGGGAG 57.142 37.037 1.66 0.00 0.00 4.30
2711 3149 9.617975 CGAATCAAGAAAAAGCTAAAAGATCTT 57.382 29.630 0.88 0.88 0.00 2.40
2712 3150 8.787852 ACGAATCAAGAAAAAGCTAAAAGATCT 58.212 29.630 0.00 0.00 0.00 2.75
2713 3151 8.956617 ACGAATCAAGAAAAAGCTAAAAGATC 57.043 30.769 0.00 0.00 0.00 2.75
2715 3153 9.825972 CATACGAATCAAGAAAAAGCTAAAAGA 57.174 29.630 0.00 0.00 0.00 2.52
2716 3154 8.578769 GCATACGAATCAAGAAAAAGCTAAAAG 58.421 33.333 0.00 0.00 0.00 2.27
2717 3155 8.079203 TGCATACGAATCAAGAAAAAGCTAAAA 58.921 29.630 0.00 0.00 0.00 1.52
2718 3156 7.589395 TGCATACGAATCAAGAAAAAGCTAAA 58.411 30.769 0.00 0.00 0.00 1.85
2719 3157 7.139896 TGCATACGAATCAAGAAAAAGCTAA 57.860 32.000 0.00 0.00 0.00 3.09
2720 3158 6.735678 TGCATACGAATCAAGAAAAAGCTA 57.264 33.333 0.00 0.00 0.00 3.32
2721 3159 5.627499 TGCATACGAATCAAGAAAAAGCT 57.373 34.783 0.00 0.00 0.00 3.74
2722 3160 5.801947 ACATGCATACGAATCAAGAAAAAGC 59.198 36.000 0.00 0.00 0.00 3.51
2723 3161 7.429340 GGTACATGCATACGAATCAAGAAAAAG 59.571 37.037 0.00 0.00 0.00 2.27
2724 3162 7.094592 TGGTACATGCATACGAATCAAGAAAAA 60.095 33.333 0.00 0.00 0.00 1.94
2725 3163 6.372937 TGGTACATGCATACGAATCAAGAAAA 59.627 34.615 0.00 0.00 0.00 2.29
2726 3164 5.877564 TGGTACATGCATACGAATCAAGAAA 59.122 36.000 0.00 0.00 0.00 2.52
2727 3165 5.423886 TGGTACATGCATACGAATCAAGAA 58.576 37.500 0.00 0.00 0.00 2.52
2728 3166 5.017294 TGGTACATGCATACGAATCAAGA 57.983 39.130 0.00 0.00 0.00 3.02
2740 3178 9.845740 AATAGTCATACTAAAATGGTACATGCA 57.154 29.630 0.00 0.00 37.41 3.96
2747 3185 9.905713 ATGTGTGAATAGTCATACTAAAATGGT 57.094 29.630 18.75 0.00 44.06 3.55
2755 3193 9.618890 ATGCTAAAATGTGTGAATAGTCATACT 57.381 29.630 18.75 3.74 44.06 2.12
2756 3194 9.655769 CATGCTAAAATGTGTGAATAGTCATAC 57.344 33.333 12.47 12.47 44.01 2.39
2757 3195 9.394767 ACATGCTAAAATGTGTGAATAGTCATA 57.605 29.630 0.00 0.00 39.32 2.15
2758 3196 8.284945 ACATGCTAAAATGTGTGAATAGTCAT 57.715 30.769 0.00 0.00 39.32 3.06
2759 3197 7.686438 ACATGCTAAAATGTGTGAATAGTCA 57.314 32.000 0.00 0.00 39.32 3.41
2760 3198 9.655769 CATACATGCTAAAATGTGTGAATAGTC 57.344 33.333 7.96 0.00 46.71 2.59
2761 3199 9.177608 ACATACATGCTAAAATGTGTGAATAGT 57.822 29.630 17.41 0.00 46.71 2.12
2762 3200 9.442033 CACATACATGCTAAAATGTGTGAATAG 57.558 33.333 17.41 4.56 46.71 1.73
2763 3201 8.404765 CCACATACATGCTAAAATGTGTGAATA 58.595 33.333 17.41 0.00 46.71 1.75
2764 3202 7.093814 ACCACATACATGCTAAAATGTGTGAAT 60.094 33.333 17.41 3.56 46.71 2.57
2765 3203 6.208402 ACCACATACATGCTAAAATGTGTGAA 59.792 34.615 17.41 0.00 46.71 3.18
2766 3204 5.709631 ACCACATACATGCTAAAATGTGTGA 59.290 36.000 17.41 0.00 46.71 3.58
2768 3206 5.709631 TGACCACATACATGCTAAAATGTGT 59.290 36.000 17.26 10.12 44.90 3.72
2769 3207 6.193514 TGACCACATACATGCTAAAATGTG 57.806 37.500 14.13 14.13 45.59 3.21
2770 3208 6.832520 TTGACCACATACATGCTAAAATGT 57.167 33.333 0.00 0.00 43.21 2.71
2771 3209 8.623903 ACTATTGACCACATACATGCTAAAATG 58.376 33.333 0.00 0.00 0.00 2.32
2772 3210 8.752005 ACTATTGACCACATACATGCTAAAAT 57.248 30.769 0.00 0.00 0.00 1.82
2773 3211 8.574251 AACTATTGACCACATACATGCTAAAA 57.426 30.769 0.00 0.00 0.00 1.52
2774 3212 8.458052 CAAACTATTGACCACATACATGCTAAA 58.542 33.333 0.00 0.00 38.94 1.85
2775 3213 7.826744 TCAAACTATTGACCACATACATGCTAA 59.173 33.333 0.00 0.00 40.59 3.09
2776 3214 7.334858 TCAAACTATTGACCACATACATGCTA 58.665 34.615 0.00 0.00 40.59 3.49
2777 3215 6.179756 TCAAACTATTGACCACATACATGCT 58.820 36.000 0.00 0.00 40.59 3.79
2778 3216 6.435430 TCAAACTATTGACCACATACATGC 57.565 37.500 0.00 0.00 40.59 4.06
2781 3219 8.673711 GCTATTTCAAACTATTGACCACATACA 58.326 33.333 0.00 0.00 45.01 2.29
2782 3220 8.893727 AGCTATTTCAAACTATTGACCACATAC 58.106 33.333 0.00 0.00 45.01 2.39
2784 3222 7.944729 AGCTATTTCAAACTATTGACCACAT 57.055 32.000 0.00 0.00 45.01 3.21
2785 3223 8.856153 TTAGCTATTTCAAACTATTGACCACA 57.144 30.769 0.00 0.00 45.01 4.17
2788 3226 9.788960 CCTTTTAGCTATTTCAAACTATTGACC 57.211 33.333 0.00 0.00 45.01 4.02
2805 3243 8.148999 CGTTCCCTAATATAAGACCTTTTAGCT 58.851 37.037 0.00 0.00 0.00 3.32
2806 3244 7.387122 CCGTTCCCTAATATAAGACCTTTTAGC 59.613 40.741 0.00 0.00 0.00 3.09
2807 3245 8.645110 TCCGTTCCCTAATATAAGACCTTTTAG 58.355 37.037 0.00 0.00 0.00 1.85
2808 3246 8.551682 TCCGTTCCCTAATATAAGACCTTTTA 57.448 34.615 0.00 0.00 0.00 1.52
2809 3247 7.419865 CCTCCGTTCCCTAATATAAGACCTTTT 60.420 40.741 0.00 0.00 0.00 2.27
2810 3248 6.042897 CCTCCGTTCCCTAATATAAGACCTTT 59.957 42.308 0.00 0.00 0.00 3.11
2811 3249 5.543020 CCTCCGTTCCCTAATATAAGACCTT 59.457 44.000 0.00 0.00 0.00 3.50
2812 3250 5.085219 CCTCCGTTCCCTAATATAAGACCT 58.915 45.833 0.00 0.00 0.00 3.85
2813 3251 4.837298 ACCTCCGTTCCCTAATATAAGACC 59.163 45.833 0.00 0.00 0.00 3.85
2814 3252 6.718912 ACTACCTCCGTTCCCTAATATAAGAC 59.281 42.308 0.00 0.00 0.00 3.01
2815 3253 6.856757 ACTACCTCCGTTCCCTAATATAAGA 58.143 40.000 0.00 0.00 0.00 2.10
2816 3254 8.820153 ATACTACCTCCGTTCCCTAATATAAG 57.180 38.462 0.00 0.00 0.00 1.73
2817 3255 9.605951 AAATACTACCTCCGTTCCCTAATATAA 57.394 33.333 0.00 0.00 0.00 0.98
2818 3256 9.028284 CAAATACTACCTCCGTTCCCTAATATA 57.972 37.037 0.00 0.00 0.00 0.86
2819 3257 7.731688 TCAAATACTACCTCCGTTCCCTAATAT 59.268 37.037 0.00 0.00 0.00 1.28
2820 3258 7.068702 TCAAATACTACCTCCGTTCCCTAATA 58.931 38.462 0.00 0.00 0.00 0.98
2821 3259 5.901276 TCAAATACTACCTCCGTTCCCTAAT 59.099 40.000 0.00 0.00 0.00 1.73
2822 3260 5.271598 TCAAATACTACCTCCGTTCCCTAA 58.728 41.667 0.00 0.00 0.00 2.69
2823 3261 4.870636 TCAAATACTACCTCCGTTCCCTA 58.129 43.478 0.00 0.00 0.00 3.53
2824 3262 3.716431 TCAAATACTACCTCCGTTCCCT 58.284 45.455 0.00 0.00 0.00 4.20
2825 3263 4.100498 TGATCAAATACTACCTCCGTTCCC 59.900 45.833 0.00 0.00 0.00 3.97
2826 3264 5.272283 TGATCAAATACTACCTCCGTTCC 57.728 43.478 0.00 0.00 0.00 3.62
2827 3265 6.281405 ACATGATCAAATACTACCTCCGTTC 58.719 40.000 0.00 0.00 0.00 3.95
2828 3266 6.235231 ACATGATCAAATACTACCTCCGTT 57.765 37.500 0.00 0.00 0.00 4.44
2829 3267 5.871396 ACATGATCAAATACTACCTCCGT 57.129 39.130 0.00 0.00 0.00 4.69
2830 3268 6.280643 TGAACATGATCAAATACTACCTCCG 58.719 40.000 2.74 0.00 0.00 4.63
2831 3269 7.308229 GCATGAACATGATCAAATACTACCTCC 60.308 40.741 17.40 0.00 41.20 4.30
2832 3270 7.443575 AGCATGAACATGATCAAATACTACCTC 59.556 37.037 17.40 0.00 41.20 3.85
2833 3271 7.228108 CAGCATGAACATGATCAAATACTACCT 59.772 37.037 17.40 0.00 41.20 3.08
2834 3272 7.358066 CAGCATGAACATGATCAAATACTACC 58.642 38.462 17.40 0.00 41.20 3.18
2835 3273 7.358066 CCAGCATGAACATGATCAAATACTAC 58.642 38.462 17.40 0.00 41.20 2.73
2836 3274 6.487668 CCCAGCATGAACATGATCAAATACTA 59.512 38.462 17.40 0.00 41.20 1.82
2837 3275 5.301045 CCCAGCATGAACATGATCAAATACT 59.699 40.000 17.40 2.70 41.20 2.12
2838 3276 5.300034 TCCCAGCATGAACATGATCAAATAC 59.700 40.000 17.40 0.48 41.20 1.89
2853 3291 3.663995 TTTGTGTTGATTCCCAGCATG 57.336 42.857 0.00 0.00 38.27 4.06
2857 3295 5.245977 ACCCTAAATTTGTGTTGATTCCCAG 59.754 40.000 0.00 0.00 0.00 4.45
2866 3304 7.839680 ATCAAAGAGACCCTAAATTTGTGTT 57.160 32.000 0.00 0.00 33.61 3.32
2867 3305 7.505585 TGAATCAAAGAGACCCTAAATTTGTGT 59.494 33.333 0.00 0.00 33.61 3.72
2897 3335 9.522804 TGTTCTATTGTTGTGTTTATTTGAACC 57.477 29.630 0.00 0.00 0.00 3.62
2941 3379 3.378911 TTTTTGGAATTCAACCGAGCC 57.621 42.857 7.93 0.00 34.67 4.70
2944 3382 7.988028 ACCTTTTTATTTTTGGAATTCAACCGA 59.012 29.630 7.93 0.00 34.67 4.69
2969 3407 2.476873 ACACGCACATCGAGATCTAC 57.523 50.000 0.00 0.00 41.67 2.59
2970 3408 2.289820 GGTACACGCACATCGAGATCTA 59.710 50.000 0.00 0.00 41.67 1.98
2977 3415 1.075542 ACATTGGTACACGCACATCG 58.924 50.000 0.00 0.00 39.29 3.84
2984 3422 5.114871 CGTTGAATTTGAACATTGGTACACG 59.885 40.000 0.00 0.00 39.29 4.49
2988 3426 7.221067 GTGAAACGTTGAATTTGAACATTGGTA 59.779 33.333 0.00 0.00 0.00 3.25
2996 3434 5.918011 GGCATAGTGAAACGTTGAATTTGAA 59.082 36.000 0.00 0.00 45.86 2.69
3003 3441 3.496884 GTGAAGGCATAGTGAAACGTTGA 59.503 43.478 0.00 0.00 45.86 3.18
3020 3458 7.520131 GCAGGTGATGATCATATTCTTGTGAAG 60.520 40.741 8.54 0.00 35.44 3.02
3023 3461 5.529800 TGCAGGTGATGATCATATTCTTGTG 59.470 40.000 8.54 1.81 0.00 3.33
3024 3462 5.687780 TGCAGGTGATGATCATATTCTTGT 58.312 37.500 8.54 0.00 0.00 3.16
3029 3467 7.207383 CACAATTTGCAGGTGATGATCATATT 58.793 34.615 8.54 0.00 34.52 1.28
3048 3486 4.144297 ACATACAGTGAGGTTGCACAATT 58.856 39.130 0.00 0.00 41.19 2.32
3062 3500 5.284864 CGTGCTCTCAATATCACATACAGT 58.715 41.667 0.00 0.00 0.00 3.55
3063 3501 4.683320 CCGTGCTCTCAATATCACATACAG 59.317 45.833 0.00 0.00 0.00 2.74
3064 3502 4.099419 ACCGTGCTCTCAATATCACATACA 59.901 41.667 0.00 0.00 0.00 2.29
3065 3503 4.621991 ACCGTGCTCTCAATATCACATAC 58.378 43.478 0.00 0.00 0.00 2.39
3066 3504 4.937201 ACCGTGCTCTCAATATCACATA 57.063 40.909 0.00 0.00 0.00 2.29
3067 3505 3.827008 ACCGTGCTCTCAATATCACAT 57.173 42.857 0.00 0.00 0.00 3.21
3068 3506 4.262036 GGATACCGTGCTCTCAATATCACA 60.262 45.833 0.00 0.00 0.00 3.58
3069 3507 4.238514 GGATACCGTGCTCTCAATATCAC 58.761 47.826 0.00 0.00 0.00 3.06
3070 3508 3.895041 TGGATACCGTGCTCTCAATATCA 59.105 43.478 0.00 0.00 0.00 2.15
3071 3509 4.238514 GTGGATACCGTGCTCTCAATATC 58.761 47.826 0.00 0.00 0.00 1.63
3072 3510 3.006967 GGTGGATACCGTGCTCTCAATAT 59.993 47.826 0.00 0.00 37.19 1.28
3073 3511 2.364324 GGTGGATACCGTGCTCTCAATA 59.636 50.000 0.00 0.00 37.19 1.90
3074 3512 1.139058 GGTGGATACCGTGCTCTCAAT 59.861 52.381 0.00 0.00 37.19 2.57
3075 3513 0.535335 GGTGGATACCGTGCTCTCAA 59.465 55.000 0.00 0.00 37.19 3.02
3076 3514 2.199117 GGTGGATACCGTGCTCTCA 58.801 57.895 0.00 0.00 37.19 3.27
3084 3522 7.993416 CAAACAAGTTTGCTGGTGGATACCG 62.993 48.000 12.18 0.00 44.93 4.02
3085 3523 4.795962 CAAACAAGTTTGCTGGTGGATACC 60.796 45.833 12.18 0.00 43.71 2.73
3086 3524 4.037446 TCAAACAAGTTTGCTGGTGGATAC 59.963 41.667 18.29 0.00 46.92 2.24
3087 3525 4.211125 TCAAACAAGTTTGCTGGTGGATA 58.789 39.130 18.29 0.00 46.92 2.59
3088 3526 3.030291 TCAAACAAGTTTGCTGGTGGAT 58.970 40.909 18.29 0.00 46.92 3.41
3089 3527 2.451490 TCAAACAAGTTTGCTGGTGGA 58.549 42.857 18.29 0.00 46.92 4.02
3090 3528 2.929398 GTTCAAACAAGTTTGCTGGTGG 59.071 45.455 18.29 0.00 46.92 4.61
3091 3529 3.613737 CAGTTCAAACAAGTTTGCTGGTG 59.386 43.478 18.29 10.32 46.92 4.17
3092 3530 3.258123 ACAGTTCAAACAAGTTTGCTGGT 59.742 39.130 24.12 15.87 46.92 4.00
3093 3531 3.848726 ACAGTTCAAACAAGTTTGCTGG 58.151 40.909 24.12 15.45 46.92 4.85
3094 3532 6.751425 TCATAACAGTTCAAACAAGTTTGCTG 59.249 34.615 21.30 21.30 46.92 4.41
3095 3533 6.862209 TCATAACAGTTCAAACAAGTTTGCT 58.138 32.000 18.29 9.61 46.92 3.91
3096 3534 7.518731 TTCATAACAGTTCAAACAAGTTTGC 57.481 32.000 18.29 7.73 46.92 3.68
3099 3537 9.410556 GCATATTCATAACAGTTCAAACAAGTT 57.589 29.630 0.00 8.22 34.97 2.66
3100 3538 8.575589 TGCATATTCATAACAGTTCAAACAAGT 58.424 29.630 0.00 0.00 0.00 3.16
3101 3539 8.969121 TGCATATTCATAACAGTTCAAACAAG 57.031 30.769 0.00 0.00 0.00 3.16
3102 3540 9.190858 GTTGCATATTCATAACAGTTCAAACAA 57.809 29.630 0.00 0.00 0.00 2.83
3103 3541 8.575589 AGTTGCATATTCATAACAGTTCAAACA 58.424 29.630 0.00 0.00 0.00 2.83
3104 3542 8.970691 AGTTGCATATTCATAACAGTTCAAAC 57.029 30.769 0.00 0.00 0.00 2.93
3105 3543 9.409312 CAAGTTGCATATTCATAACAGTTCAAA 57.591 29.630 0.00 0.00 0.00 2.69
3106 3544 8.575589 ACAAGTTGCATATTCATAACAGTTCAA 58.424 29.630 1.81 0.00 0.00 2.69
3107 3545 8.109705 ACAAGTTGCATATTCATAACAGTTCA 57.890 30.769 1.81 0.00 0.00 3.18
3121 3559 9.727859 TGACCTTTTAGTAATACAAGTTGCATA 57.272 29.630 1.81 0.00 0.00 3.14
3122 3560 8.630054 TGACCTTTTAGTAATACAAGTTGCAT 57.370 30.769 1.81 0.00 0.00 3.96
3123 3561 8.453238 TTGACCTTTTAGTAATACAAGTTGCA 57.547 30.769 1.81 0.00 0.00 4.08
3124 3562 9.394477 CTTTGACCTTTTAGTAATACAAGTTGC 57.606 33.333 1.81 0.00 0.00 4.17
3125 3563 9.394477 GCTTTGACCTTTTAGTAATACAAGTTG 57.606 33.333 0.00 0.00 0.00 3.16
3126 3564 9.127277 TGCTTTGACCTTTTAGTAATACAAGTT 57.873 29.630 0.00 0.00 0.00 2.66
3127 3565 8.685838 TGCTTTGACCTTTTAGTAATACAAGT 57.314 30.769 0.00 0.00 0.00 3.16
3128 3566 9.612620 CTTGCTTTGACCTTTTAGTAATACAAG 57.387 33.333 0.00 0.00 0.00 3.16
3129 3567 8.079809 GCTTGCTTTGACCTTTTAGTAATACAA 58.920 33.333 0.00 0.00 0.00 2.41
3130 3568 7.229707 TGCTTGCTTTGACCTTTTAGTAATACA 59.770 33.333 0.00 0.00 0.00 2.29
3131 3569 7.590279 TGCTTGCTTTGACCTTTTAGTAATAC 58.410 34.615 0.00 0.00 0.00 1.89
3132 3570 7.753309 TGCTTGCTTTGACCTTTTAGTAATA 57.247 32.000 0.00 0.00 0.00 0.98
3133 3571 6.648879 TGCTTGCTTTGACCTTTTAGTAAT 57.351 33.333 0.00 0.00 0.00 1.89
3134 3572 6.648879 ATGCTTGCTTTGACCTTTTAGTAA 57.351 33.333 0.00 0.00 0.00 2.24
3135 3573 7.938140 ATATGCTTGCTTTGACCTTTTAGTA 57.062 32.000 0.00 0.00 0.00 1.82
3136 3574 6.840780 ATATGCTTGCTTTGACCTTTTAGT 57.159 33.333 0.00 0.00 0.00 2.24
3137 3575 9.884465 GTATATATGCTTGCTTTGACCTTTTAG 57.116 33.333 0.00 0.00 0.00 1.85
3138 3576 9.402320 TGTATATATGCTTGCTTTGACCTTTTA 57.598 29.630 2.37 0.00 0.00 1.52
3139 3577 8.292444 TGTATATATGCTTGCTTTGACCTTTT 57.708 30.769 2.37 0.00 0.00 2.27
3140 3578 7.880160 TGTATATATGCTTGCTTTGACCTTT 57.120 32.000 2.37 0.00 0.00 3.11
3141 3579 7.880160 TTGTATATATGCTTGCTTTGACCTT 57.120 32.000 2.37 0.00 0.00 3.50
3142 3580 7.880160 TTTGTATATATGCTTGCTTTGACCT 57.120 32.000 2.37 0.00 0.00 3.85
3143 3581 8.405531 TCTTTTGTATATATGCTTGCTTTGACC 58.594 33.333 2.37 0.00 0.00 4.02
3394 3832 6.844829 TCAGTATTGTGGATCCATCATGAAT 58.155 36.000 19.62 13.04 0.00 2.57
3395 3833 6.126681 ACTCAGTATTGTGGATCCATCATGAA 60.127 38.462 19.62 6.64 0.00 2.57
3396 3834 5.367644 ACTCAGTATTGTGGATCCATCATGA 59.632 40.000 19.62 15.30 0.00 3.07
3397 3835 5.618236 ACTCAGTATTGTGGATCCATCATG 58.382 41.667 19.62 12.23 0.00 3.07
3398 3836 5.901413 ACTCAGTATTGTGGATCCATCAT 57.099 39.130 19.62 15.07 0.00 2.45
3399 3837 5.698741 AACTCAGTATTGTGGATCCATCA 57.301 39.130 19.62 14.79 0.00 3.07
3400 3838 5.297776 CCAAACTCAGTATTGTGGATCCATC 59.702 44.000 19.62 12.25 0.00 3.51
3401 3839 5.044919 TCCAAACTCAGTATTGTGGATCCAT 60.045 40.000 19.62 4.39 30.27 3.41
3402 3840 4.288366 TCCAAACTCAGTATTGTGGATCCA 59.712 41.667 11.44 11.44 30.27 3.41
3403 3841 4.843728 TCCAAACTCAGTATTGTGGATCC 58.156 43.478 4.20 4.20 30.27 3.36
3404 3842 5.734720 TCTCCAAACTCAGTATTGTGGATC 58.265 41.667 1.07 0.00 34.75 3.36
3405 3843 5.338708 CCTCTCCAAACTCAGTATTGTGGAT 60.339 44.000 1.07 0.00 34.75 3.41
3406 3844 4.020218 CCTCTCCAAACTCAGTATTGTGGA 60.020 45.833 0.00 0.00 34.12 4.02
3407 3845 4.256920 CCTCTCCAAACTCAGTATTGTGG 58.743 47.826 0.00 0.00 0.00 4.17
3408 3846 4.692625 CACCTCTCCAAACTCAGTATTGTG 59.307 45.833 0.00 0.00 0.00 3.33
3409 3847 4.593206 TCACCTCTCCAAACTCAGTATTGT 59.407 41.667 0.00 0.00 0.00 2.71
3410 3848 5.152623 TCACCTCTCCAAACTCAGTATTG 57.847 43.478 0.00 0.00 0.00 1.90
3411 3849 5.825593 TTCACCTCTCCAAACTCAGTATT 57.174 39.130 0.00 0.00 0.00 1.89
3412 3850 5.825593 TTTCACCTCTCCAAACTCAGTAT 57.174 39.130 0.00 0.00 0.00 2.12
3413 3851 5.544176 AGATTTCACCTCTCCAAACTCAGTA 59.456 40.000 0.00 0.00 0.00 2.74
3414 3852 4.349342 AGATTTCACCTCTCCAAACTCAGT 59.651 41.667 0.00 0.00 0.00 3.41
3415 3853 4.904241 AGATTTCACCTCTCCAAACTCAG 58.096 43.478 0.00 0.00 0.00 3.35
3416 3854 4.982241 AGATTTCACCTCTCCAAACTCA 57.018 40.909 0.00 0.00 0.00 3.41
3417 3855 6.410540 ACATAGATTTCACCTCTCCAAACTC 58.589 40.000 0.00 0.00 0.00 3.01
3418 3856 6.380079 ACATAGATTTCACCTCTCCAAACT 57.620 37.500 0.00 0.00 0.00 2.66
3419 3857 6.623767 GCAACATAGATTTCACCTCTCCAAAC 60.624 42.308 0.00 0.00 0.00 2.93
3420 3858 5.415701 GCAACATAGATTTCACCTCTCCAAA 59.584 40.000 0.00 0.00 0.00 3.28
3421 3859 4.943705 GCAACATAGATTTCACCTCTCCAA 59.056 41.667 0.00 0.00 0.00 3.53
3422 3860 4.517285 GCAACATAGATTTCACCTCTCCA 58.483 43.478 0.00 0.00 0.00 3.86
3423 3861 3.557595 CGCAACATAGATTTCACCTCTCC 59.442 47.826 0.00 0.00 0.00 3.71
3424 3862 4.184629 ACGCAACATAGATTTCACCTCTC 58.815 43.478 0.00 0.00 0.00 3.20
3425 3863 4.207891 ACGCAACATAGATTTCACCTCT 57.792 40.909 0.00 0.00 0.00 3.69
3426 3864 4.946784 AACGCAACATAGATTTCACCTC 57.053 40.909 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.