>input_sequence_51286
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-------------------------------------------------------------------------GGACAAA
ATAATAGCCCGATGGTGCTCATCGGCGGATGCACATGG-TTGCACTGACTGAACTGTACTTGAGCTAGTGAGGCAGCAGC
AGAGCAGGTAAGCTAGCTCAATCCACACTTGATAAGCGCCTTTTCTCTCTCTCTCTCTGTGTCTCCAAGTGGTGT-----
----AGGTTGTGCCGGCGGCATGGGTCTTGGGCCAGTTCATCATTGCTTGGCCTCTCTTCTTGCCCTGCTTCCTCTCCTC
TGCTGCCACGGTGAGTTTCTCAGCTCCAGCACTCTCCGAAACTC-----TATATATGCGTTCGTTTTTCAGTTGGTTGGA
TGGTTTTGTTTCGTGCTGTTTGGTTGTTGGAGCTGCCGAAGAGAGTGCCAGTAGTTGGAGCTGACGAACGAACCACCAGA
GTGTCGTGTCATAGCAACAGACAAACGGATGCTTTTCATGGACAAAATTCAGTCCAACTCCCA-AACAAAACCGTGCTTT
TGCTTGCTTAATGATGTAACAAAGATAGCG------AGATCGAA---------TTCGTGCTGAGTTCAGTTT--------
GGTTCGAGCTGTAGCGAGAGGGTTCGAGCATCGGGCGCAC---GGCGACGCGTCCCGGCCGCGGTCTGT---GGTGAGGC
TGGAGCGCGCGCGGGACATGCCGGAGCTGGACGTGACCACGCCGCTCGCGACCGTCCCGCTGGTGAACCCAACACCGATG
CCGGAGGCGACCGCCGCGCCGTCGCTGGCGCACCCGACGGCCGCGGCTGGCGCGGGGAGCTGGTGCGTGGCAAGCCCGAG
CGCGGGCGCGGCGGCGCTGCAGGTGGCGCTGGACTACGCGTGCGGGCAGGGCGCGGACTGCTCGCCGATCCAGCCCGGCG
GGAGCTGCGCCGACCCGGACACCGTCCGCGACCACGCCTCCTACGCCTTCAACTCCTACTACCAGAAGAACCCCGTCCAG
ACCAGCTGCGACTTCGCCGGCGCCGCCATCCTCACCAGCACCGACCCTAGCACCACCTCCTGCAAGTACCCATCCACCAG
GTTGGTAACCATCATTCCATCAATTCCTAACTAGGCATGGTGCATGCAGACCGAGAATTTCTTCCGTTTTCTTTGGCTGA
TCGATGCAACGAACGGCG----AGCAGTACCGGTGCTTCCGTCCTGAACACGACGTCTCCGGTGACCCCGGTGAACCCGA
CGTACGGATCCCCTCCCGGCGGCTCCTACAACTCTCCTCCTGGTCCTGGCGGCTACTACAACTCCCCGCCTCTCTATGGG
TCCATGTCGCCCCCGGACTACGGCGGCAGCATCAGCGCCGCCACGGCCATGATGCCAGGCAGCAAGAGCACGACGGCCGC
C---ACGTCGCTGACGTGCCTCCTCGTCGTCGCAACGGTGTCTCTCAACCTGTGCAAGTAAGAAGCGAAGTTCGCAGGCT
TGTAATTCGCGTGCAAATGCACTTGGAGGCCGGAATGAATTGAAGAGGACTCT---------------------------
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---------------------------------------------
>chr1D_1_TraesCS1D01G428500
CCTGATTTCTCAGAAGTTTTTCATCACCGCCGAGCCATGAACCTGAATTGAAACTCTGAAAGTGCGTAGACAGAGG----
------------------------CTGCATACACACGGTTACACGTGTTCAACTAAATACCAGCATGGAG-----TGATG
TTCGTCCAGTAGAAACCGGAATGGCACGCACGTTCTTCCAG-----------TAGCCATGGACCTCTAATGGAGACAACA
TCAACCGAGCAAATCAGGGGGACAAAAAGCAAATCTCTGGGGTTTTCTCTATGATATGTGCAGCTGCCCAAGAAGATGAA
AAAG--GGTCTCCCAAAAGCAGATGCAAAGGTTGGGGATTA-------------GATGGACGAAGCATCACGTTGATCGA
GCTTCCGTTTATACCATACCACCCTTCTTCTTTCCCAGTGATCAACTAGTTCAGTGGGTACAGTGAAAAGAAGACGAGAT
TCCAAACTTTACCACCAACTCGAGTACTCGATGATGATCGGAC--------GGGTTAAAGAACAACTGCATGA-------
-----------TTATACCAAGATGCAAAAATGGGTGTGTTCTTTTGGGAAGGATTTGTGTGTCATCTCTGACGAACAGAA
CAGAGGAGAACCGGTAGAGCTGAGAATAGTAACAGAGCAGTGGTGAAGACGCTCACAACACAACACGTATGCCCATCAAT
CATCGACGGTACATATTCTCCCGGCAGTGCGTCG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AACTGTATGTAGCATCTTTGTCACAAAGAGAAAGGACATAC
TTTACCAGACGAATAAGAAGGGTGCGCCTAACCAACTGCACGAGACGAAAAACAATCCATTTCCCTGCCTCAAAATCTCA
TCATGGGCAAGCCTAATTATAAGCCATCATGAAGG-----------AAGAATTCCTCGGGTTTCTTTGCATCTTTCACGT
CCCAACTCACCCCAC-----------CTTTTCCCACCACCTTTGGCTTAATCTATTGCTCAATGTCTCGTCTCCCTAACC
-CTGCATTGCAAAGCTCCATCGCTGGCCTCCCAGCTAAAGCTTTCTCCTATTCCCCGACCCCCCCTCACCCGCGGACAAA
ATAATAGCCCGATGGTGCTCATCGGCGGATGCACATGG-TTGCACTGACTGAACTGTACTTGAGCTAGTGAGGCAGCAGC
AGAGCAGGTAAGCTAGCTCAATCCACACTTGATAAGCGCCTTTTCTCTCTCTCTCTCTGTGTCTCCAAGTGGTGT-----
----AGGTTGTGCCGGCGGCATGGGTCTTGGGCCAGTTCATCATTGCTTGGCCTCTCTTCTTGCCCTGCTTCCTCTCCTC
TGCTGCCACGGTGAGTTTCTCAGCTCCAGCACTCTCCGAAACTC-----TATATATGCGTTCGTTTTTCAGTTGGTTGGA
TGGTTTTGTTTCGTGCTGTTTGGTTGTTGGAGCTGCCGAAGAGAGTGCCAGTAGTTGGAGCTGACGAACGAACCACCAGA
GTGTCGTGTCATAGCAACAGACAAACGGATGCTTTTCATGGACAAAATTCAGTCCAACTCCCA-AACAAAACCGTGCTTT
TGCTTGCTTAATGATGTAACAAAGATAGCG------AGATCGAA---------TTCGTGCTGAGTTCAGTTT--------
GGTTCGAGCTGTAGCGAGAGGGTTCGAGCATCGGGCGCAC---GGCGACGCGTCCCGGCCGCGGTCTGT---GGTGAGGC
TGGAGCGCGCGCGGGACATGCCGGAGCTGGACGTGACCACGCCGCTCGCGACCGTCCCGCTGGTGAACCCAACACCGATG
CCGGAGGCGACCGCCGCGCCGTCGCTGGCGCACCCGACGGCCGCGGCTGGCGCGGGGAGCTGGTGCGTGGCAAGCCCGAG
CGCGGGCGCGGCGGCGCTGCAGGTGGCGCTGGACTACGCGTGCGGGCAGGGCGCGGACTGCTCGCCGATCCAGCCCGGCG
GGAGCTGCGCCGACCCGGACACCGTCCGCGACCACGCCTCCTACGCCTTCAACTCCTACTACCAGAAGAACCCCGTCCAG
ACCAGCTGCGACTTCGCCGGCGCCGCCATCCTCACCAGCACCGACCCTAGCACCACCTCCTGCAAGTACCCATCCACCAG
GTTGGTAACCATCATTCCATCAATTCCTAACTAGGCATGGTGCATGCAGACCGAGAATTTCTTCCGTTTTCTTTGGCTGA
TCGATGCAACGAACGGCG----AGCAGTACCGGTGCTTCCGTCCTGAACACGACGTCTCCGGTGACCCCGGTGAACCCGA
CGTACGGATCCCCTCCCGGCGGCTCCTACAACTCTCCTCCTGGTCCTGGCGGCTACTACAACTCCCCGCCTCTCTATGGG
TCCATGTCGCCCCCGGACTACGGCGGCAGCATCAGCGCCGCCACGGCCATGATGCCAGGCAGCAAGAGCACGACGGCCGC
C---ACGTCGCTGACGTGCCTCCTCGTCGTCGCAACGGTGTCTCTCAACCTGTGCAAGTAAGAAGCGAAGTTCGCAGGCT
TGTAATTCGCGTGCAAATGCACTTGGAGGCCGGAATGAATTGAAGAGGACTCTGTTGAACAAGCACCAAATGCATCTACA
AAACAGAGGAGGCGCCATGGCAGAAGCAGAGTGGCAA--------TGGT-------CATCGAGCAGATTGGTAG-TCGTC
AGTCAGTGTTGCAAATACTTGTAGCTGTAGTCAGTGTCAGCGAGTTTTGGCGTGTGCTTCAGGTGCGATGTTTGTAC---
--------TACTTGCATGGCATATTTCTCCATTCTGG-----AGGAGAAATATATATCTTGTATAAACCCAAGTTCTTTG
GCATCTACTCCCTCCGTTACTTAATATAAAGATCTTTTAGCTTTTTCTTGATTCGTATGCATGTACCATTTTAGTATGAC
TATTCACACATTTTAGCATGTATGTGGTCAATAGTTTGAAATAGCTAAAAGGTCTTATATTAGGGAACGGAGGTAGTATT
TGATCATGTTCATGCTGGGAATCAACACAAATTTAGGGTCTCTTTGATTCAAAGGGTTCAAATAAACACAACAATAGAAC
ATTGAAACTAAATGTCACGGCTCGGTTGAATTCCAAAAATAAAAAGGTAGATCTCGATGTGCGTGTACCAATGTTCAAAT
TCAACGTTTCACTATGCCTTCACAAGAATATGATCATCACCTGCAAATTGTGCAACCTCACTGTATGTGATATTGAGAGC
ACGGTATCCACCAGCAAACTTGTTTGAACTGTTATGAATATGCAACTTGTATTACTAAAAGGTCAAAGCAAGCATATATA
CAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCATGAT
GGATCCACAATACTGAGTTTGGAGAGGTGAAATCTATGTTGCGTT
>chr1B_1
CCTGATTTCTCCAAAGTTTTTCATCACCGCCGAGCCATGAACCTAAACTGAAACTCTGAAAGTGCGTAGGCAGCGGGGAG
CGGCACTTACAACGACTAGTATTACTGCAGACACACGGTTACACGTGTTCAACTAAATACCGGCATGGAGTGGAGTGATG
TTCGTCCAGTAGAAACCGGAATGGCACGCACGTTCTTCCAGTAGGCGGCGCCTAGCCGTGGACCTGTAATGGAGACAACA
TCGACCGAGCAAATCAGGGGGACAAAAAGCAAATCTCCGGGGTTTTTTCTATGATCCGTGCAGCTGCCCAAGAAGATGAA
AAGAAAGGTCTCCCAAAAGCAGATGCAAAGGTTTGGGGATTAGATAGATGGATGGATGGACGAGGCATCACGTTGGTCGA
GCTTCCGTTTATACCACACCGCCGTTCTTCTTTCCCAGTGATCAACTAGTTCAGTGGGTACAGTAAAAAGAAGACGAGAT
TCTCAACTTTTCCACCAACTCGAGTACCCGATGATGATCGGACATTCGGACCAGTTAAAGAACCACTGCGTGAAATGCAA
GGAACAGAGGATTATACCAAGA----------------------------------------------------------
----------------------------------------------------TCAGAACACAACACGTATGTCGATCAAT
CATCGACGGTACATATTCTCCCGGCGGTGCGTCTTTTCTTTTTAAGGAGGAAGACCCCGGCATCTAAGCGATCCATGCAT
CCACTTTATTAATTATTCACAAAAAACATTATAAAGAAATATAGCAGTAAGTCTGAAGCCACCGGCTAGGCAACATCTAT
CGCTACTCCTATCCAGTTGATGAAGGGATACTGATAGTCCGGGCCTATTGTCAAACAGACCTCGCAGCCAAGCCTAACAT
CTAAGACTTGAGGCCCCAACCAAGCCAGGCAGTGCGTCTAACTGTGGGTATCCTCTTTGTCACAAAGGGAAAGGAAATAC
TTTAGCAGACGAATAAGAAGGGTGCGCCTAACCAACTGCACAAAGCGAAAAACAAACCATTTCCCTGCCTCAAAATCTCA
TCATGGGCAGGGCTAATTATAAGCCATCATGAAGG-----------AGGAATTCCTCGGGTTTCTTTGCATCTTTCACCC
CA-----------------------ACTTTTGCCGCCACCTTTGGCTTAATCTATTGCTCGTTGTCTCGTCTCCCTTACC
TCTGCATTGCAAAGCTCCATCGCTGGCCTCCCAGCTAAAGTTTTCTCCTATTCCCCGACCCCTCCTCGCCCGTGGACAAA
ATAATAGCCCGATGG-------------ATGCAGATGG-TTGCACTCACTGAACTGTACTTGAGCTAGTGAGGCCGCAGC
AGAGCAGCTAAGCTAGCTCACTCCAAATTTGCCAAGTTTATTTTCC---------------TCTCCAAGTGGTGTAGCTG
TGCAAGCTCGTACCAT---CATGGGTCATGGGCCAGTTCATCATTGCTTGGCTTCTCTTCTTGTCCTGCTTCCTCTCTAC
TACTGCCACGGTGAGCTTCCCAACTCGACTACTCTCTCAAGTCTCAATC----------TTCGTCTGTCAAGGT------
---TTTTGCTCTGCTCTGTTTGGTTGTTAGAGCTGACGAAGAGAGTGCCAGTAGTTGGAGCTGACGAACGAACCACGAGA
GCCTCGTGTCATAGCAACAGACAAACGGATGCTTTTCATGGACAAAATTCAGTCCAACTCCCA-AACAAAACCGTGCTTT
TGCTTGCTTATTAATGATGTAACAAAAATCAAGGCAAGATCGAA---------CTCGTGCTGATTTCAATTC--------
GGTTCGAGCTGCAGCGAGAGGGGTCGAGCAGAGAGCGCTC---GGCGACGCGTCGCGGCCGCGCTCTGT---GGTGAGGC
TGGAGCGCGCGCGCGACATGCCGGAGCTGGACGTGACCACGCCGCTCGCGACGGTCCCGCTGGCGAACCCGACGCCGATG
CCGGAGGCGACCGCCGCGCCGACGCTGGCGCACCCGACGGCCGCGGCCGGCGCGGGGAGCTGGTGCGTGGCGAGCCCGAG
CGCGGGCGCGGGGGCGCTGCAGGTGGCGCTCGACTACGCGTGCGGGCAGGGCGCGGACTGCTCGCCGATCCAGCCCGGCG
GGAGCTGCGCCGACCCGGACACCGTGCGCGACCACGCCTCCTACGCCTTCAACTCCTACTACCAGAAGAACCCCGTGCAG
ACCAGCTGCGACTTCGCCGGCGCCGCCATCCTCACCAGCACCGACCCCAGCACCACCTCCTGCAAGTACCCATCCACCAG
GTTGGTAACCATCA--------ATTCTCACACA-------------CAGACCGAGAACTTCTTCCATTTTCTTTGGCTGA
TCGATGCAACGGCTGACATGCATGCAGCACCGGTGCTTCCGTCCTGAACACGACGTCTCCGGTGACCCCGGTGAACCCGA
CGTACGGATCCCCTCCCGGCGGCTCCTACAACTCTCCTCCCGGTCCAGGCGGCTACTACAACTCCCCTCCTATCTACGGG
TCCATGTCGCCCCCGGACTACGGCGGCAGCATCAGCGCCGCCACGGCAATGATGCCCGGCAGCAAGTGCACGACGGCCGT
GACAACGTCGCTGACATGCCTCCTCGTCA---CGACGATGTCCCTCGGCCTGCACAAGTAAGAAGCGAAGTTCACATGGT
TTTAATTCGCGCGCAAATGCACTTGGATGCCAGAATGAACTGAAGAGGATTCAGATGAACCGGCACCAATTGCATCCAGA
AAACAGAGGAGGCGCCATGACAGAAGCAGAGTAGCAA--------TGGGCAATGGCCGCCGGGCAGGCTGGTAG-TAGTC
AGTCAGTGTTGCAAATATTTGTAGCTGTAGTCAGTGTCTGCGAGTTTTGGCGT--------------ATGTTTGTAC---
--------TACTTGCATGACATATTTCTCCATTGTGG-----AGAACCGAAGTTATTCGGATCTGGCATTTGATCATGTT
TTTTGTAATAAA--------------------------------------------------------------------
----------------------------------------------------------------------------TATT
TGATCATGTTAATGTTGGGAATCGGCACAAATTTAGGGCCTCTTTGATTCAAAGTATTCAAATGAACACAACAATAGAAC
ATTGAAACTAAATGTCACCGCACGGTAGAATTCTGAAAATAAAAAGCCAGATCTTGATGTGTGTGGACCAATGCTCAAAT
CCAACGTTTCACTATGCTTTTGCAAGGATATGATCAGCACCCGCACATTGTGCA--------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr1A_1
CCTGAATTCTCCAAAGTTTTTCATCACCGCCGAGCCATGAACCTAAACTGAAACTCTGAAAGTGCGTAGACAGAGG----
---CACTTACAACGACTAGTATTACTGCATACACACGGTTACACGTGTTGAACTAAATACCAGCATGGAG-----TGATG
TTCGTCCAGTAGAAACCGGAATGGCACGCACGTTCTTCCAGTAGCCGGCGCCTAGCCGTGGACCTATAATGGAGACAACA
TCAACCGAGCAAATCAGGGGGACAAAAAGCAAATCTCT-GGGTTTTCTCTATGATATGTGCAGCTGCCCGAGAAGATGAA
AAGAAAGGTCTCCCAAAAGCAGATGCAAAGGTTGGGGATTA-------------GATGGACGAAGCATCACGTTGATCGA
GCTTCCGTTTATACCA-----CCCTTCTCCTTTCCCAGTGATCAACTAGTTCAGTGGGCACAGTTAAAAGAAGACGAGAT
TCTGAACTTTACCACCAACTCGAGTACCCGATGATGATCGGAC--------CAGTTAAAGAACAACTGCGTGCAATCAAA
GGAACAGCGTGTGGTTTCTTTGACAAGGA-------------------------TTGTGTGTCATCTCTGATGAACAGAA
GAGAACCGGT------GAGCTGAGAATGGTAACAGAGCAGTGGTGCAGACGCTCACAACACAACACGTACGTCGATCAAT
CATCGACGGTACATATTCTCCC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGCAGTGCGTCTAACTGTAGGTAGCATCTTTGTCACAAAGAGAAAGGAAATAC
TTCACCAGACGAATAAGAATTGTGCGCCT----AACTGCACGAGACGAAAAACAATCCATTTTCCTATCACAAAATCTCA
TCATGGGCAAGGCTAATTATAAGCCATCATGAAGGCGCCCCACACGAAGAATTCCTCGAGCTCCTTTGCATCTCTCACCT
CCCTACTCACCCTGCCTTTCCTCTCACTTTTGCCGCCACCTTTGGCTTAATCTATTGCTCCTTGTCTCGTTTCCCTGACC
-CTGCATTGCAAAGCTCCAACGCTGGTTTC--------------------------------------------------
-------CCCGATGGTGCTTATCGGCGGATGCAGATGCTTTGCACTGACTGAACTGTACTTGAGCTACTGAGGCAGCAGC
AGAGCAGCTAAGCTAGCTCACTCCACACTTGATAAGCTGCTTTTT--------TCTCTCTGTCTCCAAGTGGTGTGGCTG
TGCAAGGTTGTGCCGGCGGCATGGGTATTGGGCCAGTTCATCATTGCTTGGCCTCTCTTCTTGTCCTGCTTCCTCTCCTC
TGCTGCCACGGTGAGCTTCTCAGCTCGACTACTCTCTCAAGTCTCCATTTATACATGCGTTCGTCTGTCAGTTGGTTA--
----------------TGTTTGGTTGTTGGAGCTCACCA--AGAGTGCCAGTAGTTGGAGCTGACGAACAAACCACCAGA
GTGTCGGGTCATAGCAACAGACAAACGGATGCTTTCTGTCGAG-AAATCTAGTTGAACTCTCAGAACAAAACTCTGCTTT
TGCTCGCTTAATGATGTAATAATGATGATCGGACCAAGAATTTCGTGCGGCTGCTCGTGCTGATTTCAGTTTGTTTGATT
GGTTCGTGCAGCGGTGAGAGGCGTCGAGCAGAGAGCGCACACCGGCGCCGCGTCGCGCCCCCAGGCCGCCACGGTGAGGC
TGGAGCGCGCGCGTGACATGCCGGAGCTGGACGTGACGACGCCGCTGGCGACGGTCCCGCTGGCGAACCCGACGCCGATG
CCGGAGGCGACCGCCGCGCCGACGCTGGCGCACCCAACGGCCGCGGCTGGCGCGGGGAGCTGGTGCGTGGCGAGCCCGAG
CGCGGGCGCGGCGGCGCTGCAGGTGGCGCTGGACTACGCGTGCGGGCAGGGCGCGGACTGCTCGCCAATCCAGCCCGGCG
GGAGCTGCGCCGACCCGGACACCGTCCGCGACCACGCCTCCTACGCCTTCAACTCCTACTACCAGAAGAACCCCGTCCAG
ACCAGCTGCGACTTCGCCGGCGCCGCCATCCTCACCAGCACCGATCCCAGCACCACCTCTTGCAAGTACCCATCCACTAG
GTTGGTAACCATCA--------ATTCCTAACTAAGCATGGTGCATGCAAACCCATAATTTCTTCCGTTTTCTTCGGCTGA
TCGATGCAACGAACGGCG----TGCAGCACCGGTGCTTCCGTCCTGAACACGACGTCTCCGGTGACCCCGGTGAACCCGA
CGTACGGATCCCCTCCCGGCGGCTCCTACAACTCTCCTCCTGGTCCTGGCGGCTACTACAACTCCCCTCCTATCTACGGG
TCCATGTCGCCTCCGGACTACGGCGGCAGCATCAGCGCCGCCACGGCGGTGATGCCCGGCAGCAAGAGCACGACGGCCGC
C---ACGTCGCTGACGTGCCTCCTCGTCGTCGCAACGGTGTCTCTCAACCTGTGCAAGTAAGAAGCGAAGTACGCAGGCT
TGTAATTCGCGCGCAAATGCACTTGGAGGCTGAAGTGGGCCGAAGAGGATTCAGATGAACAGGCACCAAATGCATCTAGA
AAACAGAGGAGGCGCCATGACAGAAGCAGAGTAGCAA--------TGGG-------CACCGGGCAGGCTGGCCCCTAGTC
AGTCAGTGTTGCAAATGTTTGTAGTTGCAGTCAGTGTCAGCGAGTTTTGGCGT--------------GTGCTTGAGGTGG
GATGTTTGTACTTGCATGCCATATTTCTCCGTTGTGGTCTGGAGGAGAAAATATA-------------------------
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>chr1A_1907
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----------------------------------------------------------------GAAGAACCCCGTCCAG
ACCAGCTGCGACTTCGCCGGCGCCGCCATCCTCACCAGCACCGATCCCAGCACCACCTCCTGCAAGTACCCATCCACCAG
GTTGGTAACCATCA--------ATTCCTAACTAAGCCGCCG------------------TCTTCCCTTTTCTTTGTCTGA
TCGGAGCGACGACTGGCATGCATGCAGCACCGGTGCATCCATCCTGAACACGACGAATCCGGTGACCCCGGTGGCCCCGA
TGTTCGGATCCCCTCCCGGGGGCTCCTACAACTCCCCTCCTGGTCCTGGCGGCTACTACAACTCCCCTCCTCTCTACGGG
TCCATGTCGCCTCCGGACTACGGCGGCAGCATCAGCTCCGCCACGGCGATGATGCCGGGCAGCAAGAGCACGACGGCCGT
CACAACGTCGCTGACGTGCCTCCTCGTCA---CGACGATGTCCCTCGGCCTGCACAAGTAAGAAGCGAAGTTCACATGCT
TTTTACTCGCGCGCAAGTGCACTTGGAGGCCAGAATGAACCGAAGAGGATTCAGATGAACAGGCACCAATTACATCCAGA
AAACAGGGGAGGCGCCATGACAGAAGCAGAGTAGCAAATGGGCAATGGC-------CGCCGGGCAGGCTGGTAG-TAGTC
AGTCAGTGTTGCAAATATTTGTAGCTGTAGTCAGTGTCAGCGAGTTTTGGCGT--------------ATGTTTCAGATGG
AATGTTTGTACTTGCATGACATATTTCTCCATTGTGG-----AGGAGAAAATTATATCTTGTATAAACC-----------
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---------------------------------------------
>SNPs
-----------SS-------------------------------S--S--------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S-------S--------------
--------------------------------------------------------------------------------
--SS----------------------------------------------------------------------------
----------------S---S-------------------------------------------S---------------
--SS-----------------------S-----------------------SS----------------S----------
----------------------SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--------
S---SSS-SSSSSSSS-----------S-----------------S-------------------------S-S------
-------------------------S-------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S----------------------------S----
--------------------------------------------------------------------------------
-----------S------------------------------------------------------------------S-
---S--------SS-----------------S--S-------------------------SS--------------S---
----------------------------------------S---------------------S----S----S-------
-------------------S-------------S----------------------------------------------
-------S------------S----------------SS------SSSSSSSS-----S---------------------
---------------------------------------------------------------S----------------
---------------S----------S-SS------SS--SSSS---------S----------S-S----------SSS
SSS-----S-SS-SS--------------------S--------------------------------------------
--------------------------------------------------------------------------------
-------------------S--S----SSS-----------------------S---------S----------------
-----------S----------S-------SS-S--------------------S-------------------------
-------------S--------------------------------------S----------S------S--S------
---------------------S-------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------SSSSSSSS-----------S----------------------------------------------
----------------------S----S----------------------------------------------------
-------------------------------------------------------------------S--------S---
-----------------------------------------------S--------S-----------------------
--------------------------------------------------------------------------------
-----------S---------------------------S---------S--S-S------S----------------S-
-------------------S------------S---------------S---------S--S----SS--------S---
-----------------S-----------------------------------SSSSSSSSSSSSSS-------------
------------------S--------------S----------------SS-----------------SSSS-SS-S-S
SSS-S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
----------S---S--------SS-------------S---------------SS-------S----------------
------------------S--S----S------SS-----------SS------S------S---S-------S------
S----------------S--SS----S---------S----S---S--------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_218
--------------------------------------------------------------------------------
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--------------------------------------GCACGTTCTTCCAGTAGCCA----------------------
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>reverse_1868
--------------------------------------------------------------------------------
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---------------------------GCGAGATCGAATTCGTGCTG---------------------------------
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>forward_1716
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----------------TGTTTGGTTGTTGGAGCTGC--------------------------------------------
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>reverse_2900
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-------------------GCAGAAGCAGAGTGGCAATG-----------------------------------------
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---------------------------------------------
