Multiple sequence alignment - TraesCS1D01G404600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G404600 chr1D 100.000 2804 0 0 1 2804 469585889 469588692 0.000000e+00 5179.0
1 TraesCS1D01G404600 chr1A 89.431 1618 93 39 527 2118 562784176 562785741 0.000000e+00 1969.0
2 TraesCS1D01G404600 chr1A 89.377 273 21 4 2123 2391 562785779 562786047 1.240000e-88 337.0
3 TraesCS1D01G404600 chr1A 77.442 563 24 30 1 505 562783673 562784190 1.000000e-59 241.0
4 TraesCS1D01G404600 chr1A 82.727 220 11 10 2375 2589 562786063 562786260 1.340000e-38 171.0
5 TraesCS1D01G404600 chr1A 100.000 30 0 0 2600 2629 562786245 562786274 3.900000e-04 56.5
6 TraesCS1D01G404600 chr1B 93.286 1132 44 19 864 1988 649368454 649369560 0.000000e+00 1640.0
7 TraesCS1D01G404600 chr1B 91.775 462 22 9 2129 2589 649369728 649370174 1.830000e-176 628.0
8 TraesCS1D01G404600 chr1B 81.206 564 22 31 1 501 649367642 649368184 7.330000e-101 377.0
9 TraesCS1D01G404600 chr1B 79.225 284 26 14 527 803 649368174 649368431 1.730000e-37 167.0
10 TraesCS1D01G404600 chr3B 79.116 498 84 14 1155 1640 439333721 439333232 2.690000e-85 326.0
11 TraesCS1D01G404600 chr3A 79.424 486 81 13 1146 1620 464319835 464320312 2.690000e-85 326.0
12 TraesCS1D01G404600 chr3D 78.340 494 87 14 1155 1636 340415715 340415230 4.540000e-78 302.0
13 TraesCS1D01G404600 chr3D 91.124 169 13 1 2638 2804 531557795 531557627 7.810000e-56 228.0
14 TraesCS1D01G404600 chr6D 91.176 170 13 1 2637 2804 42959862 42959693 2.170000e-56 230.0
15 TraesCS1D01G404600 chr6D 89.474 171 14 3 2637 2804 155841807 155841638 2.190000e-51 213.0
16 TraesCS1D01G404600 chr7D 90.361 166 16 0 2631 2796 390686405 390686570 4.700000e-53 219.0
17 TraesCS1D01G404600 chr7D 89.286 168 16 2 2639 2804 596619766 596619599 2.830000e-50 209.0
18 TraesCS1D01G404600 chr4A 91.250 160 13 1 2637 2796 606339204 606339046 1.690000e-52 217.0
19 TraesCS1D01G404600 chr5A 89.474 171 15 3 2637 2804 536818183 536818013 2.190000e-51 213.0
20 TraesCS1D01G404600 chr7A 88.824 170 17 1 2637 2804 521802369 521802200 1.020000e-49 207.0
21 TraesCS1D01G404600 chr2A 88.824 170 17 2 2637 2804 673284622 673284453 1.020000e-49 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G404600 chr1D 469585889 469588692 2803 False 5179.0 5179 100.0000 1 2804 1 chr1D.!!$F1 2803
1 TraesCS1D01G404600 chr1A 562783673 562786274 2601 False 554.9 1969 87.7954 1 2629 5 chr1A.!!$F1 2628
2 TraesCS1D01G404600 chr1B 649367642 649370174 2532 False 703.0 1640 86.3730 1 2589 4 chr1B.!!$F1 2588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 290 0.027586 GGCGATTCGAACAATTCCGG 59.972 55.0 10.88 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 1954 0.975135 CATGATCCTCCGAGCTCCAT 59.025 55.0 8.47 0.58 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.453070 GATCACAGGCCTCCGCTCC 62.453 68.421 0.00 0.00 34.44 4.70
107 134 0.449786 TTGGCGCGGACATACATTTG 59.550 50.000 8.83 0.00 0.00 2.32
126 153 0.730494 GTGTCGGTAGAACGAACGGG 60.730 60.000 0.00 0.00 45.38 5.28
240 287 1.815132 GCTGGCGATTCGAACAATTC 58.185 50.000 10.88 0.00 0.00 2.17
243 290 0.027586 GGCGATTCGAACAATTCCGG 59.972 55.000 10.88 0.00 0.00 5.14
252 299 2.537401 GAACAATTCCGGTCGTAGGAG 58.463 52.381 0.00 0.00 39.22 3.69
261 308 2.491291 GTCGTAGGAGGAGACCACC 58.509 63.158 0.00 0.00 0.00 4.61
384 468 1.610363 TTTTGTCACGGCCATGCTAA 58.390 45.000 2.24 0.00 0.00 3.09
506 595 1.367659 GCCAGCATCTGAAGACACTC 58.632 55.000 0.00 0.00 32.44 3.51
507 596 1.338484 GCCAGCATCTGAAGACACTCA 60.338 52.381 0.00 0.00 32.44 3.41
508 597 2.873245 GCCAGCATCTGAAGACACTCAA 60.873 50.000 0.00 0.00 32.44 3.02
509 598 2.740981 CCAGCATCTGAAGACACTCAAC 59.259 50.000 0.00 0.00 32.44 3.18
510 599 2.740981 CAGCATCTGAAGACACTCAACC 59.259 50.000 0.00 0.00 32.44 3.77
511 600 1.728971 GCATCTGAAGACACTCAACCG 59.271 52.381 0.00 0.00 0.00 4.44
512 601 1.728971 CATCTGAAGACACTCAACCGC 59.271 52.381 0.00 0.00 0.00 5.68
514 603 1.143305 CTGAAGACACTCAACCGCAG 58.857 55.000 0.00 0.00 0.00 5.18
515 604 0.750249 TGAAGACACTCAACCGCAGA 59.250 50.000 0.00 0.00 0.00 4.26
516 605 1.138069 TGAAGACACTCAACCGCAGAA 59.862 47.619 0.00 0.00 0.00 3.02
517 606 2.210116 GAAGACACTCAACCGCAGAAA 58.790 47.619 0.00 0.00 0.00 2.52
518 607 2.325583 AGACACTCAACCGCAGAAAA 57.674 45.000 0.00 0.00 0.00 2.29
519 608 2.639065 AGACACTCAACCGCAGAAAAA 58.361 42.857 0.00 0.00 0.00 1.94
520 609 2.354821 AGACACTCAACCGCAGAAAAAC 59.645 45.455 0.00 0.00 0.00 2.43
521 610 2.088423 ACACTCAACCGCAGAAAAACA 58.912 42.857 0.00 0.00 0.00 2.83
522 611 2.490115 ACACTCAACCGCAGAAAAACAA 59.510 40.909 0.00 0.00 0.00 2.83
523 612 3.057174 ACACTCAACCGCAGAAAAACAAA 60.057 39.130 0.00 0.00 0.00 2.83
524 613 3.923461 CACTCAACCGCAGAAAAACAAAA 59.077 39.130 0.00 0.00 0.00 2.44
525 614 4.387256 CACTCAACCGCAGAAAAACAAAAA 59.613 37.500 0.00 0.00 0.00 1.94
611 700 3.452264 AGCTCATCTGGCATGTGTACTTA 59.548 43.478 0.00 0.00 0.00 2.24
615 704 5.744171 TCATCTGGCATGTGTACTTAACAT 58.256 37.500 0.00 0.00 41.10 2.71
616 705 6.883744 TCATCTGGCATGTGTACTTAACATA 58.116 36.000 0.00 0.00 41.10 2.29
618 707 7.657354 TCATCTGGCATGTGTACTTAACATATC 59.343 37.037 0.00 0.00 37.79 1.63
619 708 5.983118 TCTGGCATGTGTACTTAACATATCG 59.017 40.000 0.00 0.00 37.79 2.92
620 709 4.509970 TGGCATGTGTACTTAACATATCGC 59.490 41.667 0.00 0.00 37.79 4.58
621 710 4.376008 GGCATGTGTACTTAACATATCGCG 60.376 45.833 0.00 0.00 37.79 5.87
622 711 4.443063 GCATGTGTACTTAACATATCGCGA 59.557 41.667 13.09 13.09 37.79 5.87
623 712 5.051307 GCATGTGTACTTAACATATCGCGAA 60.051 40.000 15.24 2.68 37.79 4.70
624 713 6.346598 GCATGTGTACTTAACATATCGCGAAT 60.347 38.462 15.24 5.34 37.79 3.34
625 714 7.564128 CATGTGTACTTAACATATCGCGAATT 58.436 34.615 15.24 8.22 37.79 2.17
626 715 8.696175 CATGTGTACTTAACATATCGCGAATTA 58.304 33.333 15.24 1.35 37.79 1.40
627 716 8.631676 TGTGTACTTAACATATCGCGAATTAA 57.368 30.769 15.24 14.30 41.10 1.40
628 717 8.533965 TGTGTACTTAACATATCGCGAATTAAC 58.466 33.333 15.24 6.11 41.10 2.01
629 718 8.000435 GTGTACTTAACATATCGCGAATTAACC 59.000 37.037 15.24 5.76 41.10 2.85
642 761 3.430218 CGAATTAACCCGATCTGCATCTC 59.570 47.826 0.00 0.00 0.00 2.75
643 762 4.380531 GAATTAACCCGATCTGCATCTCA 58.619 43.478 0.00 0.00 0.00 3.27
661 780 2.221169 TCAAAACGATTCTGCAGCTGT 58.779 42.857 16.64 1.26 0.00 4.40
662 781 3.398406 TCAAAACGATTCTGCAGCTGTA 58.602 40.909 16.64 10.46 0.00 2.74
663 782 4.002982 TCAAAACGATTCTGCAGCTGTAT 58.997 39.130 16.64 4.08 0.00 2.29
665 784 4.606457 AAACGATTCTGCAGCTGTATTC 57.394 40.909 16.64 7.44 0.00 1.75
666 785 3.251479 ACGATTCTGCAGCTGTATTCA 57.749 42.857 16.64 3.43 0.00 2.57
667 786 3.193263 ACGATTCTGCAGCTGTATTCAG 58.807 45.455 16.64 13.71 43.87 3.02
692 811 1.208052 TGAGCTGAGGCATCTGGTTAC 59.792 52.381 11.22 0.87 41.70 2.50
694 813 1.912043 AGCTGAGGCATCTGGTTACTT 59.088 47.619 4.02 0.00 41.70 2.24
695 814 3.107601 AGCTGAGGCATCTGGTTACTTA 58.892 45.455 4.02 0.00 41.70 2.24
696 815 3.519510 AGCTGAGGCATCTGGTTACTTAA 59.480 43.478 4.02 0.00 41.70 1.85
697 816 4.164988 AGCTGAGGCATCTGGTTACTTAAT 59.835 41.667 4.02 0.00 41.70 1.40
698 817 4.884164 GCTGAGGCATCTGGTTACTTAATT 59.116 41.667 7.38 0.00 38.54 1.40
699 818 5.008118 GCTGAGGCATCTGGTTACTTAATTC 59.992 44.000 7.38 0.00 38.54 2.17
700 819 5.437060 TGAGGCATCTGGTTACTTAATTCC 58.563 41.667 0.00 0.00 0.00 3.01
701 820 5.045213 TGAGGCATCTGGTTACTTAATTCCA 60.045 40.000 0.00 0.00 0.00 3.53
702 821 5.826643 AGGCATCTGGTTACTTAATTCCAA 58.173 37.500 0.00 0.00 0.00 3.53
703 822 5.888161 AGGCATCTGGTTACTTAATTCCAAG 59.112 40.000 0.00 0.00 0.00 3.61
704 823 5.885912 GGCATCTGGTTACTTAATTCCAAGA 59.114 40.000 0.00 0.00 0.00 3.02
705 824 6.377146 GGCATCTGGTTACTTAATTCCAAGAA 59.623 38.462 0.00 0.00 0.00 2.52
706 825 7.093945 GGCATCTGGTTACTTAATTCCAAGAAA 60.094 37.037 0.00 0.00 0.00 2.52
707 826 8.303876 GCATCTGGTTACTTAATTCCAAGAAAA 58.696 33.333 0.00 0.00 0.00 2.29
784 904 1.518572 CCACTACCATCGTGTCGGC 60.519 63.158 0.00 0.00 0.00 5.54
799 919 2.828868 GGCAGCCATATCACCCGA 59.171 61.111 6.55 0.00 0.00 5.14
800 920 1.376466 GGCAGCCATATCACCCGAT 59.624 57.895 6.55 0.00 35.50 4.18
801 921 0.674895 GGCAGCCATATCACCCGATC 60.675 60.000 6.55 0.00 32.73 3.69
802 922 0.035317 GCAGCCATATCACCCGATCA 59.965 55.000 0.00 0.00 32.73 2.92
803 923 1.339438 GCAGCCATATCACCCGATCAT 60.339 52.381 0.00 0.00 32.73 2.45
804 924 2.353323 CAGCCATATCACCCGATCATG 58.647 52.381 0.00 0.00 32.73 3.07
818 947 2.936498 CGATCATGGTCAACACTAACCC 59.064 50.000 6.80 0.00 34.47 4.11
819 948 3.618752 CGATCATGGTCAACACTAACCCA 60.619 47.826 6.80 0.00 34.47 4.51
820 949 3.417069 TCATGGTCAACACTAACCCAG 57.583 47.619 0.00 0.00 34.47 4.45
821 950 2.976185 TCATGGTCAACACTAACCCAGA 59.024 45.455 0.00 0.00 34.47 3.86
822 951 2.922740 TGGTCAACACTAACCCAGAC 57.077 50.000 0.00 0.00 34.47 3.51
823 952 1.418637 TGGTCAACACTAACCCAGACC 59.581 52.381 0.00 0.00 44.37 3.85
842 971 1.556911 CCAGCCAGTCTGTTACCATCT 59.443 52.381 0.00 0.00 41.25 2.90
882 1015 0.467290 TCACACAGCTCCAAAACCCC 60.467 55.000 0.00 0.00 0.00 4.95
885 1018 1.153756 ACAGCTCCAAAACCCCCAG 59.846 57.895 0.00 0.00 0.00 4.45
892 1025 0.545071 CCAAAACCCCCAGCTCCATT 60.545 55.000 0.00 0.00 0.00 3.16
986 1119 2.402305 CAAGCCAGCATCTCGATCTAC 58.598 52.381 0.00 0.00 0.00 2.59
987 1120 1.993956 AGCCAGCATCTCGATCTACT 58.006 50.000 0.00 0.00 0.00 2.57
988 1121 1.885887 AGCCAGCATCTCGATCTACTC 59.114 52.381 0.00 0.00 0.00 2.59
989 1122 1.885887 GCCAGCATCTCGATCTACTCT 59.114 52.381 0.00 0.00 0.00 3.24
1035 1171 4.891037 GCCCTCATCCTGCTGGCC 62.891 72.222 4.42 0.00 36.07 5.36
1038 1174 2.202987 CTCATCCTGCTGGCCGTC 60.203 66.667 4.42 0.00 0.00 4.79
1806 1945 0.460284 CCGCGTGCCTCTTGTAAGAT 60.460 55.000 4.92 0.00 33.93 2.40
1814 1953 5.179368 CGTGCCTCTTGTAAGATGAAGAAAA 59.821 40.000 1.76 0.00 33.93 2.29
1815 1954 6.293407 CGTGCCTCTTGTAAGATGAAGAAAAA 60.293 38.462 1.76 0.00 33.93 1.94
1816 1955 7.573843 CGTGCCTCTTGTAAGATGAAGAAAAAT 60.574 37.037 1.76 0.00 33.93 1.82
1817 1956 7.540055 GTGCCTCTTGTAAGATGAAGAAAAATG 59.460 37.037 1.76 0.00 33.93 2.32
1821 1960 7.820648 TCTTGTAAGATGAAGAAAAATGGAGC 58.179 34.615 0.00 0.00 0.00 4.70
1822 1961 7.667219 TCTTGTAAGATGAAGAAAAATGGAGCT 59.333 33.333 0.00 0.00 0.00 4.09
1823 1962 7.383102 TGTAAGATGAAGAAAAATGGAGCTC 57.617 36.000 4.71 4.71 0.00 4.09
1824 1963 5.557891 AAGATGAAGAAAAATGGAGCTCG 57.442 39.130 7.83 0.00 0.00 5.03
1835 1974 1.117749 TGGAGCTCGGAGGATCATGG 61.118 60.000 7.83 0.00 36.25 3.66
1836 1975 1.118356 GGAGCTCGGAGGATCATGGT 61.118 60.000 7.83 0.00 36.25 3.55
1837 1976 0.755686 GAGCTCGGAGGATCATGGTT 59.244 55.000 7.20 0.00 36.25 3.67
1911 2050 6.126623 TGTGCATGGATTTGGATAGGTTACTA 60.127 38.462 0.00 0.00 0.00 1.82
1912 2051 6.204882 GTGCATGGATTTGGATAGGTTACTAC 59.795 42.308 0.00 0.00 30.59 2.73
1913 2052 6.101150 TGCATGGATTTGGATAGGTTACTACT 59.899 38.462 0.00 0.00 30.59 2.57
1976 2117 3.375782 AATGTTCAGTTTTGCTGCTCC 57.624 42.857 0.00 0.00 44.66 4.70
1994 2135 5.440610 TGCTCCTTTTCTTCTTCTCTTGTT 58.559 37.500 0.00 0.00 0.00 2.83
1995 2136 6.591935 TGCTCCTTTTCTTCTTCTCTTGTTA 58.408 36.000 0.00 0.00 0.00 2.41
2023 2164 1.581447 GGCGAGAAAGTTTGGGCTG 59.419 57.895 0.00 0.00 0.00 4.85
2168 2356 6.987992 TGGTGAAAACGAACACTTAATACTCT 59.012 34.615 0.00 0.00 37.22 3.24
2173 2361 5.618056 ACGAACACTTAATACTCTCACGA 57.382 39.130 0.00 0.00 0.00 4.35
2180 2368 2.674796 AATACTCTCACGAGGCAACC 57.325 50.000 0.00 0.00 41.71 3.77
2193 2381 3.447742 GAGGCAACCTTTTTCTGTTGTG 58.552 45.455 0.00 0.00 42.91 3.33
2200 2388 6.128035 GCAACCTTTTTCTGTTGTGGAAAAAT 60.128 34.615 12.57 0.44 43.80 1.82
2232 2420 5.010516 ACAAGTAGATCTTCCATCGATCTGG 59.989 44.000 0.00 0.00 45.26 3.86
2269 2457 4.913335 AATGAGATTTGGTGCTGCTATG 57.087 40.909 0.00 0.00 0.00 2.23
2270 2458 3.354948 TGAGATTTGGTGCTGCTATGT 57.645 42.857 0.00 0.00 0.00 2.29
2271 2459 3.273434 TGAGATTTGGTGCTGCTATGTC 58.727 45.455 0.00 0.00 0.00 3.06
2272 2460 3.054875 TGAGATTTGGTGCTGCTATGTCT 60.055 43.478 0.00 0.00 0.00 3.41
2277 2465 6.434028 AGATTTGGTGCTGCTATGTCTTTTTA 59.566 34.615 0.00 0.00 0.00 1.52
2313 2501 2.900716 TTTTTAGGGCAACTTGGTGC 57.099 45.000 1.44 1.44 44.14 5.01
2418 2641 1.807142 GACTGGACAAACTAAGCCTGC 59.193 52.381 0.00 0.00 0.00 4.85
2461 2684 2.190488 CTTGGTCTGGGCCCTGTCTC 62.190 65.000 25.70 16.31 0.00 3.36
2463 2686 1.997874 GGTCTGGGCCCTGTCTCAT 60.998 63.158 25.70 0.00 0.00 2.90
2464 2687 1.524482 GTCTGGGCCCTGTCTCATC 59.476 63.158 25.70 7.08 0.00 2.92
2465 2688 1.080907 TCTGGGCCCTGTCTCATCA 59.919 57.895 25.70 0.96 0.00 3.07
2466 2689 0.326904 TCTGGGCCCTGTCTCATCAT 60.327 55.000 25.70 0.00 0.00 2.45
2467 2690 0.179026 CTGGGCCCTGTCTCATCATG 60.179 60.000 25.70 0.00 0.00 3.07
2468 2691 1.527844 GGGCCCTGTCTCATCATGC 60.528 63.158 17.04 0.00 0.00 4.06
2469 2692 1.530771 GGCCCTGTCTCATCATGCT 59.469 57.895 0.00 0.00 0.00 3.79
2498 2725 1.549203 GATCCTGTGTTTGTGGCCAT 58.451 50.000 9.72 0.00 0.00 4.40
2518 2745 5.063204 CCATTGAATTCTATCACGGGCTAA 58.937 41.667 7.05 0.00 0.00 3.09
2529 2756 2.492484 TCACGGGCTAACTCTCTTCTTC 59.508 50.000 0.00 0.00 0.00 2.87
2532 2759 3.193903 ACGGGCTAACTCTCTTCTTCTTC 59.806 47.826 0.00 0.00 0.00 2.87
2533 2760 3.429684 CGGGCTAACTCTCTTCTTCTTCC 60.430 52.174 0.00 0.00 0.00 3.46
2558 2785 0.108089 TGCGAAATAACGGGCTAGCA 60.108 50.000 18.24 0.00 0.00 3.49
2583 2810 2.565841 CAGGCCTCCTAGTGTAAATGC 58.434 52.381 0.00 0.00 29.64 3.56
2584 2811 2.092968 CAGGCCTCCTAGTGTAAATGCA 60.093 50.000 0.00 0.00 29.64 3.96
2585 2812 2.171448 AGGCCTCCTAGTGTAAATGCAG 59.829 50.000 0.00 0.00 28.47 4.41
2586 2813 1.943340 GCCTCCTAGTGTAAATGCAGC 59.057 52.381 0.00 0.00 0.00 5.25
2587 2814 2.420687 GCCTCCTAGTGTAAATGCAGCT 60.421 50.000 0.00 0.00 0.00 4.24
2588 2815 3.181465 GCCTCCTAGTGTAAATGCAGCTA 60.181 47.826 0.00 0.00 0.00 3.32
2589 2816 4.626042 CCTCCTAGTGTAAATGCAGCTAG 58.374 47.826 0.00 0.00 0.00 3.42
2590 2817 4.054671 CTCCTAGTGTAAATGCAGCTAGC 58.945 47.826 6.62 6.62 45.96 3.42
2591 2818 3.134458 CCTAGTGTAAATGCAGCTAGCC 58.866 50.000 12.13 0.00 44.83 3.93
2592 2819 3.181461 CCTAGTGTAAATGCAGCTAGCCT 60.181 47.826 12.13 0.00 44.83 4.58
2593 2820 4.039245 CCTAGTGTAAATGCAGCTAGCCTA 59.961 45.833 12.13 0.00 44.83 3.93
2594 2821 4.487714 AGTGTAAATGCAGCTAGCCTAA 57.512 40.909 12.13 0.00 44.83 2.69
2595 2822 4.843728 AGTGTAAATGCAGCTAGCCTAAA 58.156 39.130 12.13 0.00 44.83 1.85
2596 2823 4.636206 AGTGTAAATGCAGCTAGCCTAAAC 59.364 41.667 12.13 1.80 44.83 2.01
2597 2824 4.394920 GTGTAAATGCAGCTAGCCTAAACA 59.605 41.667 12.13 4.50 44.83 2.83
2598 2825 5.007034 TGTAAATGCAGCTAGCCTAAACAA 58.993 37.500 12.13 0.00 44.83 2.83
2599 2826 5.475220 TGTAAATGCAGCTAGCCTAAACAAA 59.525 36.000 12.13 0.00 44.83 2.83
2600 2827 4.708726 AATGCAGCTAGCCTAAACAAAG 57.291 40.909 12.13 0.00 44.83 2.77
2601 2828 3.140325 TGCAGCTAGCCTAAACAAAGT 57.860 42.857 12.13 0.00 44.83 2.66
2602 2829 2.813754 TGCAGCTAGCCTAAACAAAGTG 59.186 45.455 12.13 0.00 44.83 3.16
2603 2830 2.814336 GCAGCTAGCCTAAACAAAGTGT 59.186 45.455 12.13 0.00 37.23 3.55
2604 2831 4.000988 GCAGCTAGCCTAAACAAAGTGTA 58.999 43.478 12.13 0.00 37.23 2.90
2605 2832 4.454504 GCAGCTAGCCTAAACAAAGTGTAA 59.545 41.667 12.13 0.00 37.23 2.41
2606 2833 5.048991 GCAGCTAGCCTAAACAAAGTGTAAA 60.049 40.000 12.13 0.00 37.23 2.01
2607 2834 6.349363 GCAGCTAGCCTAAACAAAGTGTAAAT 60.349 38.462 12.13 0.00 37.23 1.40
2608 2835 7.023575 CAGCTAGCCTAAACAAAGTGTAAATG 58.976 38.462 12.13 0.00 0.00 2.32
2630 2857 1.821753 AGCTACAGTACAGAGCTGTGG 59.178 52.381 16.19 6.36 44.77 4.17
2631 2858 1.134965 GCTACAGTACAGAGCTGTGGG 60.135 57.143 16.19 4.34 45.59 4.61
2632 2859 0.895530 TACAGTACAGAGCTGTGGGC 59.104 55.000 16.19 7.28 45.59 5.36
2641 2868 2.345991 GCTGTGGGCTCCGTACAA 59.654 61.111 0.00 0.00 38.06 2.41
2642 2869 1.078426 GCTGTGGGCTCCGTACAAT 60.078 57.895 0.00 0.00 38.06 2.71
2643 2870 1.369091 GCTGTGGGCTCCGTACAATG 61.369 60.000 0.00 0.00 38.06 2.82
2644 2871 1.369091 CTGTGGGCTCCGTACAATGC 61.369 60.000 0.00 0.00 0.00 3.56
2645 2872 1.376683 GTGGGCTCCGTACAATGCA 60.377 57.895 0.00 0.00 0.00 3.96
2646 2873 0.958382 GTGGGCTCCGTACAATGCAA 60.958 55.000 0.00 0.00 0.00 4.08
2647 2874 0.676466 TGGGCTCCGTACAATGCAAG 60.676 55.000 0.00 0.00 0.00 4.01
2648 2875 1.376609 GGGCTCCGTACAATGCAAGG 61.377 60.000 0.00 0.00 0.00 3.61
2649 2876 0.676782 GGCTCCGTACAATGCAAGGT 60.677 55.000 0.00 0.00 0.00 3.50
2650 2877 0.447801 GCTCCGTACAATGCAAGGTG 59.552 55.000 0.00 0.00 0.00 4.00
2651 2878 0.447801 CTCCGTACAATGCAAGGTGC 59.552 55.000 0.00 0.00 45.29 5.01
2652 2879 0.036164 TCCGTACAATGCAAGGTGCT 59.964 50.000 0.00 0.00 45.31 4.40
2653 2880 0.881118 CCGTACAATGCAAGGTGCTT 59.119 50.000 0.00 0.00 45.31 3.91
2654 2881 2.080693 CCGTACAATGCAAGGTGCTTA 58.919 47.619 0.00 0.00 45.31 3.09
2655 2882 2.159572 CCGTACAATGCAAGGTGCTTAC 60.160 50.000 0.00 0.00 45.31 2.34
2656 2883 2.473868 CGTACAATGCAAGGTGCTTACG 60.474 50.000 0.00 6.00 45.31 3.18
2657 2884 1.890876 ACAATGCAAGGTGCTTACGA 58.109 45.000 0.00 0.00 45.31 3.43
2658 2885 1.806542 ACAATGCAAGGTGCTTACGAG 59.193 47.619 0.00 0.00 45.31 4.18
2659 2886 2.076100 CAATGCAAGGTGCTTACGAGA 58.924 47.619 0.00 0.00 45.31 4.04
2660 2887 2.015736 ATGCAAGGTGCTTACGAGAG 57.984 50.000 0.00 0.00 45.31 3.20
2661 2888 0.037326 TGCAAGGTGCTTACGAGAGG 60.037 55.000 1.43 0.00 45.31 3.69
2662 2889 0.037232 GCAAGGTGCTTACGAGAGGT 60.037 55.000 0.00 0.00 40.96 3.85
2663 2890 1.714794 CAAGGTGCTTACGAGAGGTG 58.285 55.000 0.00 0.00 0.00 4.00
2664 2891 0.037232 AAGGTGCTTACGAGAGGTGC 60.037 55.000 0.00 0.00 0.00 5.01
2665 2892 0.900647 AGGTGCTTACGAGAGGTGCT 60.901 55.000 0.00 0.00 0.00 4.40
2666 2893 0.037232 GGTGCTTACGAGAGGTGCTT 60.037 55.000 0.00 0.00 0.00 3.91
2667 2894 1.071605 GTGCTTACGAGAGGTGCTTG 58.928 55.000 0.00 0.00 0.00 4.01
2668 2895 0.966179 TGCTTACGAGAGGTGCTTGA 59.034 50.000 0.00 0.00 0.00 3.02
2669 2896 1.343142 TGCTTACGAGAGGTGCTTGAA 59.657 47.619 0.00 0.00 0.00 2.69
2670 2897 1.996191 GCTTACGAGAGGTGCTTGAAG 59.004 52.381 0.00 0.00 0.00 3.02
2671 2898 2.352814 GCTTACGAGAGGTGCTTGAAGA 60.353 50.000 0.00 0.00 0.00 2.87
2672 2899 3.861131 GCTTACGAGAGGTGCTTGAAGAA 60.861 47.826 0.00 0.00 0.00 2.52
2673 2900 2.910688 ACGAGAGGTGCTTGAAGAAA 57.089 45.000 0.00 0.00 0.00 2.52
2674 2901 3.409026 ACGAGAGGTGCTTGAAGAAAT 57.591 42.857 0.00 0.00 0.00 2.17
2675 2902 4.537135 ACGAGAGGTGCTTGAAGAAATA 57.463 40.909 0.00 0.00 0.00 1.40
2676 2903 4.894784 ACGAGAGGTGCTTGAAGAAATAA 58.105 39.130 0.00 0.00 0.00 1.40
2677 2904 5.305585 ACGAGAGGTGCTTGAAGAAATAAA 58.694 37.500 0.00 0.00 0.00 1.40
2678 2905 5.763204 ACGAGAGGTGCTTGAAGAAATAAAA 59.237 36.000 0.00 0.00 0.00 1.52
2679 2906 6.080406 CGAGAGGTGCTTGAAGAAATAAAAC 58.920 40.000 0.00 0.00 0.00 2.43
2680 2907 6.293407 CGAGAGGTGCTTGAAGAAATAAAACA 60.293 38.462 0.00 0.00 0.00 2.83
2681 2908 7.530426 AGAGGTGCTTGAAGAAATAAAACAT 57.470 32.000 0.00 0.00 0.00 2.71
2682 2909 7.373493 AGAGGTGCTTGAAGAAATAAAACATG 58.627 34.615 0.00 0.00 0.00 3.21
2683 2910 5.928264 AGGTGCTTGAAGAAATAAAACATGC 59.072 36.000 0.00 0.00 34.07 4.06
2684 2911 5.928264 GGTGCTTGAAGAAATAAAACATGCT 59.072 36.000 0.00 0.00 34.40 3.79
2685 2912 6.424812 GGTGCTTGAAGAAATAAAACATGCTT 59.575 34.615 0.00 0.00 34.40 3.91
2686 2913 7.041848 GGTGCTTGAAGAAATAAAACATGCTTT 60.042 33.333 0.00 0.00 34.40 3.51
2687 2914 8.006027 GTGCTTGAAGAAATAAAACATGCTTTC 58.994 33.333 0.00 0.00 34.40 2.62
2688 2915 7.927629 TGCTTGAAGAAATAAAACATGCTTTCT 59.072 29.630 0.00 0.52 39.08 2.52
2689 2916 8.768019 GCTTGAAGAAATAAAACATGCTTTCTT 58.232 29.630 14.88 14.88 45.65 2.52
2717 2944 6.801539 CACCGGTGCTTATTTATACATGAT 57.198 37.500 24.02 0.00 0.00 2.45
2718 2945 7.899178 CACCGGTGCTTATTTATACATGATA 57.101 36.000 24.02 0.00 0.00 2.15
2719 2946 7.963981 CACCGGTGCTTATTTATACATGATAG 58.036 38.462 24.02 0.00 0.00 2.08
2720 2947 7.817478 CACCGGTGCTTATTTATACATGATAGA 59.183 37.037 24.02 0.00 0.00 1.98
2721 2948 7.817962 ACCGGTGCTTATTTATACATGATAGAC 59.182 37.037 6.12 0.00 0.00 2.59
2722 2949 7.009265 CCGGTGCTTATTTATACATGATAGACG 59.991 40.741 0.00 0.00 0.00 4.18
2723 2950 7.462856 CGGTGCTTATTTATACATGATAGACGC 60.463 40.741 0.00 0.00 0.00 5.19
2724 2951 7.545965 GGTGCTTATTTATACATGATAGACGCT 59.454 37.037 0.00 0.00 0.00 5.07
2725 2952 8.926710 GTGCTTATTTATACATGATAGACGCTT 58.073 33.333 0.00 0.00 0.00 4.68
2733 2960 9.582431 TTATACATGATAGACGCTTAATTAGGC 57.418 33.333 9.43 9.43 0.00 3.93
2741 2968 2.395654 CGCTTAATTAGGCGTCTCTCC 58.604 52.381 28.00 0.00 45.15 3.71
2742 2969 2.034812 CGCTTAATTAGGCGTCTCTCCT 59.965 50.000 28.00 0.00 45.15 3.69
2743 2970 3.252701 CGCTTAATTAGGCGTCTCTCCTA 59.747 47.826 28.00 0.00 45.15 2.94
2744 2971 4.082679 CGCTTAATTAGGCGTCTCTCCTAT 60.083 45.833 28.00 0.00 45.15 2.57
2745 2972 5.123502 CGCTTAATTAGGCGTCTCTCCTATA 59.876 44.000 28.00 0.00 45.15 1.31
2746 2973 6.557110 GCTTAATTAGGCGTCTCTCCTATAG 58.443 44.000 3.59 0.00 36.20 1.31
2747 2974 6.374894 GCTTAATTAGGCGTCTCTCCTATAGA 59.625 42.308 3.59 0.00 36.20 1.98
2748 2975 7.094291 GCTTAATTAGGCGTCTCTCCTATAGAA 60.094 40.741 3.59 0.00 36.20 2.10
2749 2976 8.701908 TTAATTAGGCGTCTCTCCTATAGAAA 57.298 34.615 0.00 0.00 36.20 2.52
2750 2977 7.784470 AATTAGGCGTCTCTCCTATAGAAAT 57.216 36.000 0.00 0.00 36.20 2.17
2751 2978 8.880991 AATTAGGCGTCTCTCCTATAGAAATA 57.119 34.615 0.00 0.00 36.20 1.40
2752 2979 7.925043 TTAGGCGTCTCTCCTATAGAAATAG 57.075 40.000 0.00 0.00 36.20 1.73
2753 2980 6.129414 AGGCGTCTCTCCTATAGAAATAGA 57.871 41.667 0.00 0.00 37.84 1.98
2754 2981 5.941647 AGGCGTCTCTCCTATAGAAATAGAC 59.058 44.000 0.00 7.66 37.84 2.59
2755 2982 5.706369 GGCGTCTCTCCTATAGAAATAGACA 59.294 44.000 17.24 0.00 37.84 3.41
2756 2983 6.348704 GGCGTCTCTCCTATAGAAATAGACAC 60.349 46.154 17.24 11.36 37.84 3.67
2757 2984 6.428771 GCGTCTCTCCTATAGAAATAGACACT 59.571 42.308 17.24 0.00 37.84 3.55
2758 2985 7.572353 GCGTCTCTCCTATAGAAATAGACACTG 60.572 44.444 17.24 8.21 37.84 3.66
2759 2986 7.094975 CGTCTCTCCTATAGAAATAGACACTGG 60.095 44.444 17.24 0.00 37.84 4.00
2760 2987 7.722285 GTCTCTCCTATAGAAATAGACACTGGT 59.278 40.741 0.00 0.00 37.84 4.00
2761 2988 7.721842 TCTCTCCTATAGAAATAGACACTGGTG 59.278 40.741 0.00 0.00 37.84 4.17
2762 2989 6.265649 TCTCCTATAGAAATAGACACTGGTGC 59.734 42.308 0.00 0.00 37.84 5.01
2763 2990 6.136857 TCCTATAGAAATAGACACTGGTGCT 58.863 40.000 0.00 2.45 37.84 4.40
2764 2991 6.611642 TCCTATAGAAATAGACACTGGTGCTT 59.388 38.462 0.00 0.00 37.84 3.91
2765 2992 7.125811 TCCTATAGAAATAGACACTGGTGCTTT 59.874 37.037 0.00 0.00 37.84 3.51
2766 2993 8.421784 CCTATAGAAATAGACACTGGTGCTTTA 58.578 37.037 0.00 0.00 37.84 1.85
2767 2994 9.469807 CTATAGAAATAGACACTGGTGCTTTAG 57.530 37.037 0.00 0.00 37.84 1.85
2768 2995 6.360370 AGAAATAGACACTGGTGCTTTAGA 57.640 37.500 0.17 0.00 0.00 2.10
2769 2996 6.769512 AGAAATAGACACTGGTGCTTTAGAA 58.230 36.000 0.17 0.00 0.00 2.10
2770 2997 7.224297 AGAAATAGACACTGGTGCTTTAGAAA 58.776 34.615 0.17 0.00 0.00 2.52
2771 2998 7.719633 AGAAATAGACACTGGTGCTTTAGAAAA 59.280 33.333 0.17 0.00 0.00 2.29
2772 2999 7.817418 AATAGACACTGGTGCTTTAGAAAAA 57.183 32.000 0.17 0.00 0.00 1.94
2773 3000 8.409358 AATAGACACTGGTGCTTTAGAAAAAT 57.591 30.769 0.17 0.00 0.00 1.82
2774 3001 6.319141 AGACACTGGTGCTTTAGAAAAATC 57.681 37.500 0.17 0.00 0.00 2.17
2775 3002 5.241728 AGACACTGGTGCTTTAGAAAAATCC 59.758 40.000 0.17 0.00 0.00 3.01
2776 3003 4.023193 ACACTGGTGCTTTAGAAAAATCCG 60.023 41.667 0.17 0.00 0.00 4.18
2777 3004 3.506067 ACTGGTGCTTTAGAAAAATCCGG 59.494 43.478 0.00 0.00 0.00 5.14
2778 3005 3.492337 TGGTGCTTTAGAAAAATCCGGT 58.508 40.909 0.00 0.00 0.00 5.28
2779 3006 3.892588 TGGTGCTTTAGAAAAATCCGGTT 59.107 39.130 0.00 0.00 0.00 4.44
2780 3007 4.342665 TGGTGCTTTAGAAAAATCCGGTTT 59.657 37.500 0.00 0.00 0.00 3.27
2781 3008 5.535406 TGGTGCTTTAGAAAAATCCGGTTTA 59.465 36.000 0.00 0.00 0.00 2.01
2782 3009 6.209788 TGGTGCTTTAGAAAAATCCGGTTTAT 59.790 34.615 0.00 0.00 0.00 1.40
2783 3010 7.094631 GGTGCTTTAGAAAAATCCGGTTTATT 58.905 34.615 0.00 0.00 0.00 1.40
2784 3011 7.601130 GGTGCTTTAGAAAAATCCGGTTTATTT 59.399 33.333 0.00 0.00 0.00 1.40
2785 3012 8.984764 GTGCTTTAGAAAAATCCGGTTTATTTT 58.015 29.630 0.00 3.75 37.98 1.82
2786 3013 9.549078 TGCTTTAGAAAAATCCGGTTTATTTTT 57.451 25.926 19.49 19.49 44.88 1.94
2794 3021 8.528917 AAAATCCGGTTTATTTTTCTAAGCAC 57.471 30.769 0.00 0.00 33.78 4.40
2795 3022 5.632244 TCCGGTTTATTTTTCTAAGCACC 57.368 39.130 0.00 0.00 0.00 5.01
2796 3023 4.460034 TCCGGTTTATTTTTCTAAGCACCC 59.540 41.667 0.00 0.00 0.00 4.61
2797 3024 4.381185 CCGGTTTATTTTTCTAAGCACCCC 60.381 45.833 0.00 0.00 0.00 4.95
2798 3025 4.461431 CGGTTTATTTTTCTAAGCACCCCT 59.539 41.667 0.00 0.00 0.00 4.79
2799 3026 5.648960 CGGTTTATTTTTCTAAGCACCCCTA 59.351 40.000 0.00 0.00 0.00 3.53
2800 3027 6.151480 CGGTTTATTTTTCTAAGCACCCCTAA 59.849 38.462 0.00 0.00 0.00 2.69
2801 3028 7.544622 GGTTTATTTTTCTAAGCACCCCTAAG 58.455 38.462 0.00 0.00 0.00 2.18
2802 3029 6.769134 TTATTTTTCTAAGCACCCCTAAGC 57.231 37.500 0.00 0.00 0.00 3.09
2803 3030 3.799432 TTTTCTAAGCACCCCTAAGCA 57.201 42.857 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.290885 CCCCGAAAAAGAAAAGACACAAAAG 59.709 40.000 0.00 0.00 0.00 2.27
89 106 0.675208 ACAAATGTATGTCCGCGCCA 60.675 50.000 0.00 0.00 0.00 5.69
91 108 0.446222 ACACAAATGTATGTCCGCGC 59.554 50.000 0.00 0.00 37.26 6.86
100 127 4.502171 TCGTTCTACCGACACAAATGTA 57.498 40.909 0.00 0.00 39.95 2.29
107 134 0.730494 CCCGTTCGTTCTACCGACAC 60.730 60.000 0.00 0.00 36.42 3.67
240 287 1.823041 GGTCTCCTCCTACGACCGG 60.823 68.421 0.00 0.00 38.00 5.28
243 290 0.323178 TGGTGGTCTCCTCCTACGAC 60.323 60.000 8.11 0.00 37.97 4.34
252 299 2.084546 GCTAACATGTTGGTGGTCTCC 58.915 52.381 21.42 0.00 0.00 3.71
261 308 2.097304 TGCCGCTATTGCTAACATGTTG 59.903 45.455 21.42 11.79 36.97 3.33
279 326 0.035317 TGTCACTCACATGGACTGCC 59.965 55.000 0.00 0.00 32.84 4.85
304 363 2.490903 GCTGCAGTTCTCACATGGATTT 59.509 45.455 16.64 0.00 0.00 2.17
305 364 2.089980 GCTGCAGTTCTCACATGGATT 58.910 47.619 16.64 0.00 0.00 3.01
474 563 0.966875 TGCTGGCGCTGAATCCAATT 60.967 50.000 7.64 0.00 36.97 2.32
522 611 6.705863 AAAGAGTGTCTTCAGATGCTTTTT 57.294 33.333 0.00 0.00 35.27 1.94
523 612 6.705863 AAAAGAGTGTCTTCAGATGCTTTT 57.294 33.333 0.00 0.00 35.27 2.27
524 613 7.807977 TTAAAAGAGTGTCTTCAGATGCTTT 57.192 32.000 0.00 0.00 35.27 3.51
525 614 7.807977 TTTAAAAGAGTGTCTTCAGATGCTT 57.192 32.000 0.00 0.00 35.27 3.91
526 615 7.992754 ATTTAAAAGAGTGTCTTCAGATGCT 57.007 32.000 0.00 0.00 35.27 3.79
527 616 7.540055 CCAATTTAAAAGAGTGTCTTCAGATGC 59.460 37.037 0.00 0.00 35.27 3.91
528 617 8.571336 ACCAATTTAAAAGAGTGTCTTCAGATG 58.429 33.333 0.00 0.00 35.27 2.90
529 618 8.697507 ACCAATTTAAAAGAGTGTCTTCAGAT 57.302 30.769 0.00 0.00 35.27 2.90
530 619 8.519799 AACCAATTTAAAAGAGTGTCTTCAGA 57.480 30.769 0.00 0.00 35.27 3.27
531 620 7.587757 CGAACCAATTTAAAAGAGTGTCTTCAG 59.412 37.037 0.00 0.00 35.27 3.02
532 621 7.414436 CGAACCAATTTAAAAGAGTGTCTTCA 58.586 34.615 0.00 0.00 35.27 3.02
533 622 6.359883 GCGAACCAATTTAAAAGAGTGTCTTC 59.640 38.462 0.00 0.00 35.27 2.87
534 623 6.039382 AGCGAACCAATTTAAAAGAGTGTCTT 59.961 34.615 0.00 0.00 38.59 3.01
535 624 5.531287 AGCGAACCAATTTAAAAGAGTGTCT 59.469 36.000 0.00 0.00 0.00 3.41
536 625 5.758924 AGCGAACCAATTTAAAAGAGTGTC 58.241 37.500 0.00 0.00 0.00 3.67
537 626 5.767816 AGCGAACCAATTTAAAAGAGTGT 57.232 34.783 0.00 0.00 0.00 3.55
538 627 7.360361 AGTAAGCGAACCAATTTAAAAGAGTG 58.640 34.615 0.00 0.00 0.00 3.51
539 628 7.506328 AGTAAGCGAACCAATTTAAAAGAGT 57.494 32.000 0.00 0.00 0.00 3.24
540 629 8.797266 AAAGTAAGCGAACCAATTTAAAAGAG 57.203 30.769 0.00 0.00 0.00 2.85
541 630 9.589111 AAAAAGTAAGCGAACCAATTTAAAAGA 57.411 25.926 0.00 0.00 0.00 2.52
568 657 8.099537 TGAGCTTCAAGTTGATCTTCTCTTTAT 58.900 33.333 6.36 0.00 33.63 1.40
611 700 3.719924 TCGGGTTAATTCGCGATATGTT 58.280 40.909 10.88 5.72 45.03 2.71
618 707 0.232303 GCAGATCGGGTTAATTCGCG 59.768 55.000 0.00 0.00 43.33 5.87
619 708 1.295792 TGCAGATCGGGTTAATTCGC 58.704 50.000 0.00 0.00 0.00 4.70
620 709 3.393800 AGATGCAGATCGGGTTAATTCG 58.606 45.455 0.00 0.00 33.34 3.34
621 710 4.380531 TGAGATGCAGATCGGGTTAATTC 58.619 43.478 0.00 0.00 33.34 2.17
622 711 4.422073 TGAGATGCAGATCGGGTTAATT 57.578 40.909 0.00 0.00 33.34 1.40
623 712 4.422073 TTGAGATGCAGATCGGGTTAAT 57.578 40.909 0.00 0.00 33.34 1.40
624 713 3.904800 TTGAGATGCAGATCGGGTTAA 57.095 42.857 0.00 0.00 33.34 2.01
625 714 3.904800 TTTGAGATGCAGATCGGGTTA 57.095 42.857 0.00 0.00 33.34 2.85
626 715 2.749621 GTTTTGAGATGCAGATCGGGTT 59.250 45.455 0.00 0.00 33.34 4.11
627 716 2.359900 GTTTTGAGATGCAGATCGGGT 58.640 47.619 0.00 0.00 33.34 5.28
628 717 1.328680 CGTTTTGAGATGCAGATCGGG 59.671 52.381 0.00 0.00 33.34 5.14
629 718 2.270923 TCGTTTTGAGATGCAGATCGG 58.729 47.619 0.00 0.00 33.34 4.18
642 761 2.693797 ACAGCTGCAGAATCGTTTTG 57.306 45.000 20.43 4.35 0.00 2.44
643 762 4.455533 TGAATACAGCTGCAGAATCGTTTT 59.544 37.500 20.43 9.00 0.00 2.43
696 815 8.408601 CGATCCTCACATTATTTTTCTTGGAAT 58.591 33.333 0.00 0.00 0.00 3.01
697 816 7.628366 GCGATCCTCACATTATTTTTCTTGGAA 60.628 37.037 0.00 0.00 0.00 3.53
698 817 6.183360 GCGATCCTCACATTATTTTTCTTGGA 60.183 38.462 0.00 0.00 0.00 3.53
699 818 5.973565 GCGATCCTCACATTATTTTTCTTGG 59.026 40.000 0.00 0.00 0.00 3.61
700 819 6.470235 GTGCGATCCTCACATTATTTTTCTTG 59.530 38.462 7.63 0.00 34.73 3.02
701 820 6.555315 GTGCGATCCTCACATTATTTTTCTT 58.445 36.000 7.63 0.00 34.73 2.52
702 821 5.220662 CGTGCGATCCTCACATTATTTTTCT 60.221 40.000 11.75 0.00 34.27 2.52
703 822 4.963953 CGTGCGATCCTCACATTATTTTTC 59.036 41.667 11.75 0.00 34.27 2.29
704 823 4.201910 CCGTGCGATCCTCACATTATTTTT 60.202 41.667 11.75 0.00 34.27 1.94
705 824 3.312421 CCGTGCGATCCTCACATTATTTT 59.688 43.478 11.75 0.00 34.27 1.82
706 825 2.872245 CCGTGCGATCCTCACATTATTT 59.128 45.455 11.75 0.00 34.27 1.40
707 826 2.483876 CCGTGCGATCCTCACATTATT 58.516 47.619 11.75 0.00 34.27 1.40
713 832 3.950794 TTGGCCGTGCGATCCTCAC 62.951 63.158 0.00 3.38 0.00 3.51
784 904 2.353323 CATGATCGGGTGATATGGCTG 58.647 52.381 0.00 0.00 34.09 4.85
799 919 3.587061 TCTGGGTTAGTGTTGACCATGAT 59.413 43.478 0.00 0.00 37.68 2.45
800 920 2.976185 TCTGGGTTAGTGTTGACCATGA 59.024 45.455 0.00 0.00 37.68 3.07
801 921 3.074412 GTCTGGGTTAGTGTTGACCATG 58.926 50.000 0.00 0.00 37.68 3.66
802 922 2.039879 GGTCTGGGTTAGTGTTGACCAT 59.960 50.000 0.00 0.00 42.32 3.55
803 923 1.418637 GGTCTGGGTTAGTGTTGACCA 59.581 52.381 0.00 0.00 42.32 4.02
804 924 1.418637 TGGTCTGGGTTAGTGTTGACC 59.581 52.381 0.00 0.00 42.87 4.02
819 948 0.977395 GGTAACAGACTGGCTGGTCT 59.023 55.000 16.21 1.27 42.03 3.85
820 949 0.685097 TGGTAACAGACTGGCTGGTC 59.315 55.000 16.21 2.46 42.03 4.02
842 971 1.306997 AGGCGAGATGGGAAGGGAA 60.307 57.895 0.00 0.00 0.00 3.97
882 1015 1.152368 GGGATGGGAATGGAGCTGG 59.848 63.158 0.00 0.00 0.00 4.85
885 1018 1.152368 CTGGGGATGGGAATGGAGC 59.848 63.158 0.00 0.00 0.00 4.70
892 1025 5.670899 TGTGATATATAACTGGGGATGGGA 58.329 41.667 1.81 0.00 0.00 4.37
942 1075 5.624738 GCTTAGCTTAGCTTAAGAGTGTGGA 60.625 44.000 17.24 0.00 40.44 4.02
976 1109 3.746114 GCTGGAGGAAGAGTAGATCGAGA 60.746 52.174 0.00 0.00 0.00 4.04
986 1119 1.094073 CGCCATTGCTGGAGGAAGAG 61.094 60.000 0.00 0.00 46.37 2.85
987 1120 1.078214 CGCCATTGCTGGAGGAAGA 60.078 57.895 0.00 0.00 46.37 2.87
988 1121 1.372087 GACGCCATTGCTGGAGGAAG 61.372 60.000 0.00 0.00 45.84 3.46
989 1122 1.377202 GACGCCATTGCTGGAGGAA 60.377 57.895 0.00 0.00 45.84 3.36
1263 1399 4.309950 ACCGTGAAGCCCGTGTCC 62.310 66.667 0.00 0.00 0.00 4.02
1806 1945 3.338249 CTCCGAGCTCCATTTTTCTTCA 58.662 45.455 8.47 0.00 0.00 3.02
1814 1953 1.347050 CATGATCCTCCGAGCTCCATT 59.653 52.381 8.47 0.00 0.00 3.16
1815 1954 0.975135 CATGATCCTCCGAGCTCCAT 59.025 55.000 8.47 0.58 0.00 3.41
1816 1955 1.117749 CCATGATCCTCCGAGCTCCA 61.118 60.000 8.47 0.00 0.00 3.86
1817 1956 1.118356 ACCATGATCCTCCGAGCTCC 61.118 60.000 8.47 0.00 0.00 4.70
1821 1960 2.093500 TGAACAACCATGATCCTCCGAG 60.093 50.000 0.00 0.00 0.00 4.63
1822 1961 1.905894 TGAACAACCATGATCCTCCGA 59.094 47.619 0.00 0.00 0.00 4.55
1823 1962 2.401583 TGAACAACCATGATCCTCCG 57.598 50.000 0.00 0.00 0.00 4.63
1824 1963 3.889815 TCATGAACAACCATGATCCTCC 58.110 45.455 0.00 0.00 45.54 4.30
1835 1974 3.026630 TCTGTCGGTCTCATGAACAAC 57.973 47.619 0.00 0.00 0.00 3.32
1836 1975 3.673323 CGATCTGTCGGTCTCATGAACAA 60.673 47.826 0.00 0.00 44.00 2.83
1837 1976 2.159379 CGATCTGTCGGTCTCATGAACA 60.159 50.000 0.00 0.00 44.00 3.18
1911 2050 2.028020 GCAGCCACCAAGAACTACTAGT 60.028 50.000 0.00 0.00 0.00 2.57
1912 2051 2.234908 AGCAGCCACCAAGAACTACTAG 59.765 50.000 0.00 0.00 0.00 2.57
1913 2052 2.028112 CAGCAGCCACCAAGAACTACTA 60.028 50.000 0.00 0.00 0.00 1.82
1994 2135 4.395959 ACTTTCTCGCCGGTTCAATATA 57.604 40.909 1.90 0.00 0.00 0.86
1995 2136 3.261981 ACTTTCTCGCCGGTTCAATAT 57.738 42.857 1.90 0.00 0.00 1.28
2053 2194 2.684001 AATCATCCAACGACGGCTTA 57.316 45.000 0.00 0.00 0.00 3.09
2118 2264 4.570772 CGACAACCGGATTCAGACATAAAT 59.429 41.667 9.46 0.00 33.91 1.40
2120 2266 3.517602 CGACAACCGGATTCAGACATAA 58.482 45.455 9.46 0.00 33.91 1.90
2121 2267 3.159353 CGACAACCGGATTCAGACATA 57.841 47.619 9.46 0.00 33.91 2.29
2168 2356 1.946768 CAGAAAAAGGTTGCCTCGTGA 59.053 47.619 0.00 0.00 30.89 4.35
2173 2361 2.168313 CCACAACAGAAAAAGGTTGCCT 59.832 45.455 4.57 0.00 46.31 4.75
2193 2381 6.084326 TCTACTTGTGGCTTCAATTTTTCC 57.916 37.500 0.00 0.00 0.00 3.13
2200 2388 4.041567 TGGAAGATCTACTTGTGGCTTCAA 59.958 41.667 0.00 0.00 39.13 2.69
2232 2420 9.617975 CAAATCTCATTTTCCTTTACAGTCTTC 57.382 33.333 0.00 0.00 0.00 2.87
2329 2517 2.717639 ACTGACACCAAGTTGCTCTT 57.282 45.000 0.00 0.00 36.75 2.85
2418 2641 5.549347 CCCATCTTCTGATCCAGATACAAG 58.451 45.833 0.00 0.00 40.39 3.16
2461 2684 1.548081 TCCAACCACCAAGCATGATG 58.452 50.000 0.00 0.00 0.00 3.07
2463 2686 1.616725 GGATCCAACCACCAAGCATGA 60.617 52.381 6.95 0.00 0.00 3.07
2464 2687 0.819582 GGATCCAACCACCAAGCATG 59.180 55.000 6.95 0.00 0.00 4.06
2465 2688 0.706433 AGGATCCAACCACCAAGCAT 59.294 50.000 15.82 0.00 0.00 3.79
2466 2689 0.251297 CAGGATCCAACCACCAAGCA 60.251 55.000 15.82 0.00 0.00 3.91
2467 2690 0.251341 ACAGGATCCAACCACCAAGC 60.251 55.000 15.82 0.00 0.00 4.01
2468 2691 1.202927 ACACAGGATCCAACCACCAAG 60.203 52.381 15.82 0.00 0.00 3.61
2469 2692 0.850100 ACACAGGATCCAACCACCAA 59.150 50.000 15.82 0.00 0.00 3.67
2498 2725 5.128827 AGAGTTAGCCCGTGATAGAATTCAA 59.871 40.000 8.44 0.00 0.00 2.69
2541 2768 1.593006 CTGTGCTAGCCCGTTATTTCG 59.407 52.381 13.29 0.00 0.00 3.46
2558 2785 1.992277 CACTAGGAGGCCTGGCTGT 60.992 63.158 12.00 6.19 35.40 4.40
2583 2810 6.554334 TTTACACTTTGTTTAGGCTAGCTG 57.446 37.500 15.72 3.14 0.00 4.24
2584 2811 6.349363 GCATTTACACTTTGTTTAGGCTAGCT 60.349 38.462 15.72 3.22 0.00 3.32
2585 2812 5.800438 GCATTTACACTTTGTTTAGGCTAGC 59.200 40.000 6.04 6.04 0.00 3.42
2586 2813 6.908825 TGCATTTACACTTTGTTTAGGCTAG 58.091 36.000 0.00 0.00 0.00 3.42
2587 2814 6.569610 GCTGCATTTACACTTTGTTTAGGCTA 60.570 38.462 0.00 0.00 0.00 3.93
2588 2815 5.772521 CTGCATTTACACTTTGTTTAGGCT 58.227 37.500 0.00 0.00 0.00 4.58
2589 2816 4.385748 GCTGCATTTACACTTTGTTTAGGC 59.614 41.667 0.00 0.00 0.00 3.93
2590 2817 5.772521 AGCTGCATTTACACTTTGTTTAGG 58.227 37.500 1.02 0.00 0.00 2.69
2591 2818 7.359595 TGTAGCTGCATTTACACTTTGTTTAG 58.640 34.615 0.00 0.00 0.00 1.85
2592 2819 7.012894 ACTGTAGCTGCATTTACACTTTGTTTA 59.987 33.333 4.51 0.00 0.00 2.01
2593 2820 6.142818 TGTAGCTGCATTTACACTTTGTTT 57.857 33.333 0.00 0.00 0.00 2.83
2594 2821 5.299279 ACTGTAGCTGCATTTACACTTTGTT 59.701 36.000 4.51 0.00 0.00 2.83
2595 2822 4.821805 ACTGTAGCTGCATTTACACTTTGT 59.178 37.500 4.51 0.00 0.00 2.83
2596 2823 5.362556 ACTGTAGCTGCATTTACACTTTG 57.637 39.130 4.51 0.00 0.00 2.77
2597 2824 5.995282 TGTACTGTAGCTGCATTTACACTTT 59.005 36.000 17.23 0.00 0.00 2.66
2598 2825 5.547465 TGTACTGTAGCTGCATTTACACTT 58.453 37.500 17.23 1.34 0.00 3.16
2599 2826 5.047306 TCTGTACTGTAGCTGCATTTACACT 60.047 40.000 17.23 2.29 0.00 3.55
2600 2827 5.168569 TCTGTACTGTAGCTGCATTTACAC 58.831 41.667 17.23 4.96 0.00 2.90
2601 2828 5.400066 TCTGTACTGTAGCTGCATTTACA 57.600 39.130 18.96 18.96 0.00 2.41
2602 2829 4.268884 GCTCTGTACTGTAGCTGCATTTAC 59.731 45.833 4.51 10.41 33.40 2.01
2603 2830 4.160439 AGCTCTGTACTGTAGCTGCATTTA 59.840 41.667 18.72 0.00 44.67 1.40
2604 2831 3.055530 AGCTCTGTACTGTAGCTGCATTT 60.056 43.478 18.72 0.00 44.67 2.32
2605 2832 2.499289 AGCTCTGTACTGTAGCTGCATT 59.501 45.455 18.72 1.81 44.67 3.56
2606 2833 2.106566 AGCTCTGTACTGTAGCTGCAT 58.893 47.619 18.72 0.00 44.67 3.96
2607 2834 1.550327 AGCTCTGTACTGTAGCTGCA 58.450 50.000 18.72 3.90 44.67 4.41
2629 2856 1.376609 CCTTGCATTGTACGGAGCCC 61.377 60.000 0.00 0.00 0.00 5.19
2630 2857 0.676782 ACCTTGCATTGTACGGAGCC 60.677 55.000 4.28 0.00 0.00 4.70
2631 2858 0.447801 CACCTTGCATTGTACGGAGC 59.552 55.000 4.28 0.00 0.00 4.70
2632 2859 0.447801 GCACCTTGCATTGTACGGAG 59.552 55.000 4.28 0.00 44.26 4.63
2633 2860 2.550487 GCACCTTGCATTGTACGGA 58.450 52.632 4.28 0.00 44.26 4.69
2643 2870 0.037232 ACCTCTCGTAAGCACCTTGC 60.037 55.000 0.00 0.00 45.46 4.01
2644 2871 1.714794 CACCTCTCGTAAGCACCTTG 58.285 55.000 0.00 0.00 37.18 3.61
2645 2872 0.037232 GCACCTCTCGTAAGCACCTT 60.037 55.000 0.00 0.00 37.18 3.50
2646 2873 0.900647 AGCACCTCTCGTAAGCACCT 60.901 55.000 0.00 0.00 37.18 4.00
2647 2874 0.037232 AAGCACCTCTCGTAAGCACC 60.037 55.000 0.00 0.00 37.18 5.01
2648 2875 1.071605 CAAGCACCTCTCGTAAGCAC 58.928 55.000 0.00 0.00 37.18 4.40
2649 2876 0.966179 TCAAGCACCTCTCGTAAGCA 59.034 50.000 0.00 0.00 37.18 3.91
2650 2877 1.996191 CTTCAAGCACCTCTCGTAAGC 59.004 52.381 0.00 0.00 37.18 3.09
2651 2878 3.577649 TCTTCAAGCACCTCTCGTAAG 57.422 47.619 0.00 0.00 0.00 2.34
2652 2879 4.330944 TTTCTTCAAGCACCTCTCGTAA 57.669 40.909 0.00 0.00 0.00 3.18
2653 2880 4.537135 ATTTCTTCAAGCACCTCTCGTA 57.463 40.909 0.00 0.00 0.00 3.43
2654 2881 2.910688 TTTCTTCAAGCACCTCTCGT 57.089 45.000 0.00 0.00 0.00 4.18
2655 2882 5.862924 TTTATTTCTTCAAGCACCTCTCG 57.137 39.130 0.00 0.00 0.00 4.04
2656 2883 6.970484 TGTTTTATTTCTTCAAGCACCTCTC 58.030 36.000 0.00 0.00 0.00 3.20
2657 2884 6.959639 TGTTTTATTTCTTCAAGCACCTCT 57.040 33.333 0.00 0.00 0.00 3.69
2658 2885 6.089954 GCATGTTTTATTTCTTCAAGCACCTC 59.910 38.462 0.00 0.00 0.00 3.85
2659 2886 5.928264 GCATGTTTTATTTCTTCAAGCACCT 59.072 36.000 0.00 0.00 0.00 4.00
2660 2887 5.928264 AGCATGTTTTATTTCTTCAAGCACC 59.072 36.000 0.00 0.00 0.00 5.01
2661 2888 7.412137 AAGCATGTTTTATTTCTTCAAGCAC 57.588 32.000 0.00 0.00 0.00 4.40
2662 2889 7.927629 AGAAAGCATGTTTTATTTCTTCAAGCA 59.072 29.630 7.58 0.00 38.51 3.91
2663 2890 8.302965 AGAAAGCATGTTTTATTTCTTCAAGC 57.697 30.769 7.58 0.00 38.51 4.01
2694 2921 6.801539 ATCATGTATAAATAAGCACCGGTG 57.198 37.500 30.66 30.66 0.00 4.94
2695 2922 7.817962 GTCTATCATGTATAAATAAGCACCGGT 59.182 37.037 0.00 0.00 0.00 5.28
2696 2923 7.009265 CGTCTATCATGTATAAATAAGCACCGG 59.991 40.741 0.00 0.00 0.00 5.28
2697 2924 7.462856 GCGTCTATCATGTATAAATAAGCACCG 60.463 40.741 0.00 0.00 0.00 4.94
2698 2925 7.545965 AGCGTCTATCATGTATAAATAAGCACC 59.454 37.037 0.00 0.00 0.00 5.01
2699 2926 8.467402 AGCGTCTATCATGTATAAATAAGCAC 57.533 34.615 0.00 0.00 0.00 4.40
2707 2934 9.582431 GCCTAATTAAGCGTCTATCATGTATAA 57.418 33.333 0.00 0.00 0.00 0.98
2722 2949 3.737032 AGGAGAGACGCCTAATTAAGC 57.263 47.619 0.00 0.00 30.33 3.09
2723 2950 7.925043 TCTATAGGAGAGACGCCTAATTAAG 57.075 40.000 5.48 2.75 39.20 1.85
2724 2951 8.701908 TTTCTATAGGAGAGACGCCTAATTAA 57.298 34.615 5.48 0.00 39.20 1.40
2725 2952 8.880991 ATTTCTATAGGAGAGACGCCTAATTA 57.119 34.615 5.48 0.00 39.20 1.40
2726 2953 7.784470 ATTTCTATAGGAGAGACGCCTAATT 57.216 36.000 5.48 0.00 39.20 1.40
2727 2954 8.330247 TCTATTTCTATAGGAGAGACGCCTAAT 58.670 37.037 5.48 0.13 39.20 1.73
2728 2955 7.607223 GTCTATTTCTATAGGAGAGACGCCTAA 59.393 40.741 12.72 0.00 39.20 2.69
2729 2956 7.104939 GTCTATTTCTATAGGAGAGACGCCTA 58.895 42.308 12.72 4.00 39.98 3.93
2730 2957 5.941647 GTCTATTTCTATAGGAGAGACGCCT 59.058 44.000 12.72 0.00 37.45 5.52
2731 2958 5.706369 TGTCTATTTCTATAGGAGAGACGCC 59.294 44.000 18.43 0.00 34.93 5.68
2732 2959 6.428771 AGTGTCTATTTCTATAGGAGAGACGC 59.571 42.308 23.26 23.26 38.86 5.19
2733 2960 7.094975 CCAGTGTCTATTTCTATAGGAGAGACG 60.095 44.444 18.43 12.20 36.01 4.18
2734 2961 7.722285 ACCAGTGTCTATTTCTATAGGAGAGAC 59.278 40.741 17.58 17.58 34.93 3.36
2735 2962 7.721842 CACCAGTGTCTATTTCTATAGGAGAGA 59.278 40.741 0.00 0.00 34.93 3.10
2736 2963 7.523052 GCACCAGTGTCTATTTCTATAGGAGAG 60.523 44.444 0.00 0.00 34.93 3.20
2737 2964 6.265649 GCACCAGTGTCTATTTCTATAGGAGA 59.734 42.308 0.00 0.00 35.45 3.71
2738 2965 6.266558 AGCACCAGTGTCTATTTCTATAGGAG 59.733 42.308 0.00 0.00 35.45 3.69
2739 2966 6.136857 AGCACCAGTGTCTATTTCTATAGGA 58.863 40.000 0.00 0.00 35.45 2.94
2740 2967 6.412362 AGCACCAGTGTCTATTTCTATAGG 57.588 41.667 0.00 0.00 35.45 2.57
2741 2968 9.469807 CTAAAGCACCAGTGTCTATTTCTATAG 57.530 37.037 0.00 0.00 35.96 1.31
2742 2969 9.197306 TCTAAAGCACCAGTGTCTATTTCTATA 57.803 33.333 0.00 0.00 0.00 1.31
2743 2970 8.079211 TCTAAAGCACCAGTGTCTATTTCTAT 57.921 34.615 0.00 0.00 0.00 1.98
2744 2971 7.476540 TCTAAAGCACCAGTGTCTATTTCTA 57.523 36.000 0.00 0.00 0.00 2.10
2745 2972 6.360370 TCTAAAGCACCAGTGTCTATTTCT 57.640 37.500 0.00 0.00 0.00 2.52
2746 2973 7.435068 TTTCTAAAGCACCAGTGTCTATTTC 57.565 36.000 0.00 0.00 0.00 2.17
2747 2974 7.817418 TTTTCTAAAGCACCAGTGTCTATTT 57.183 32.000 0.00 0.00 0.00 1.40
2748 2975 7.817418 TTTTTCTAAAGCACCAGTGTCTATT 57.183 32.000 0.00 0.00 0.00 1.73
2749 2976 7.121315 GGATTTTTCTAAAGCACCAGTGTCTAT 59.879 37.037 0.00 0.00 31.34 1.98
2750 2977 6.430000 GGATTTTTCTAAAGCACCAGTGTCTA 59.570 38.462 0.00 0.00 31.34 2.59
2751 2978 5.241728 GGATTTTTCTAAAGCACCAGTGTCT 59.758 40.000 0.00 0.00 31.34 3.41
2752 2979 5.461526 GGATTTTTCTAAAGCACCAGTGTC 58.538 41.667 0.00 0.00 31.34 3.67
2753 2980 4.023193 CGGATTTTTCTAAAGCACCAGTGT 60.023 41.667 0.00 0.00 31.34 3.55
2754 2981 4.475944 CGGATTTTTCTAAAGCACCAGTG 58.524 43.478 0.00 0.00 31.34 3.66
2755 2982 3.506067 CCGGATTTTTCTAAAGCACCAGT 59.494 43.478 0.00 0.00 31.34 4.00
2756 2983 3.506067 ACCGGATTTTTCTAAAGCACCAG 59.494 43.478 9.46 0.00 31.34 4.00
2757 2984 3.492337 ACCGGATTTTTCTAAAGCACCA 58.508 40.909 9.46 0.00 31.34 4.17
2758 2985 4.514781 AACCGGATTTTTCTAAAGCACC 57.485 40.909 9.46 0.00 31.34 5.01
2759 2986 8.528917 AAATAAACCGGATTTTTCTAAAGCAC 57.471 30.769 9.46 0.00 31.34 4.40
2760 2987 9.549078 AAAAATAAACCGGATTTTTCTAAAGCA 57.451 25.926 9.46 0.00 40.70 3.91
2768 2995 8.984764 GTGCTTAGAAAAATAAACCGGATTTTT 58.015 29.630 19.49 19.49 44.95 1.94
2769 2996 7.601130 GGTGCTTAGAAAAATAAACCGGATTTT 59.399 33.333 9.46 7.56 37.96 1.82
2770 2997 7.094631 GGTGCTTAGAAAAATAAACCGGATTT 58.905 34.615 9.46 7.90 0.00 2.17
2771 2998 6.350696 GGGTGCTTAGAAAAATAAACCGGATT 60.351 38.462 9.46 4.89 0.00 3.01
2772 2999 5.126545 GGGTGCTTAGAAAAATAAACCGGAT 59.873 40.000 9.46 0.00 0.00 4.18
2773 3000 4.460034 GGGTGCTTAGAAAAATAAACCGGA 59.540 41.667 9.46 0.00 0.00 5.14
2774 3001 4.381185 GGGGTGCTTAGAAAAATAAACCGG 60.381 45.833 0.00 0.00 0.00 5.28
2775 3002 4.461431 AGGGGTGCTTAGAAAAATAAACCG 59.539 41.667 0.00 0.00 0.00 4.44
2776 3003 5.995565 AGGGGTGCTTAGAAAAATAAACC 57.004 39.130 0.00 0.00 0.00 3.27
2777 3004 7.033791 GCTTAGGGGTGCTTAGAAAAATAAAC 58.966 38.462 0.00 0.00 0.00 2.01
2778 3005 6.722129 TGCTTAGGGGTGCTTAGAAAAATAAA 59.278 34.615 0.00 0.00 0.00 1.40
2779 3006 6.249951 TGCTTAGGGGTGCTTAGAAAAATAA 58.750 36.000 0.00 0.00 0.00 1.40
2780 3007 5.822204 TGCTTAGGGGTGCTTAGAAAAATA 58.178 37.500 0.00 0.00 0.00 1.40
2781 3008 4.672899 TGCTTAGGGGTGCTTAGAAAAAT 58.327 39.130 0.00 0.00 0.00 1.82
2782 3009 4.107127 TGCTTAGGGGTGCTTAGAAAAA 57.893 40.909 0.00 0.00 0.00 1.94
2783 3010 3.799432 TGCTTAGGGGTGCTTAGAAAA 57.201 42.857 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.