Multiple sequence alignment - TraesCS1D01G402400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G402400 chr1D 100.000 2723 0 0 1 2723 467627997 467630719 0.000000e+00 5029
1 TraesCS1D01G402400 chr1D 92.703 370 21 4 2355 2723 412166947 412166583 1.860000e-146 529
2 TraesCS1D01G402400 chr1D 85.301 415 59 2 1798 2211 66381020 66380607 6.970000e-116 427
3 TraesCS1D01G402400 chr1B 89.575 2072 138 19 320 2348 645529925 645531961 0.000000e+00 2558
4 TraesCS1D01G402400 chr1B 96.037 328 12 1 1 328 645529187 645529513 1.440000e-147 532
5 TraesCS1D01G402400 chr1B 90.270 370 35 1 2355 2723 432210776 432211145 1.470000e-132 483
6 TraesCS1D01G402400 chr1A 88.836 1478 94 15 312 1751 560311508 560310064 0.000000e+00 1749
7 TraesCS1D01G402400 chr1A 86.199 413 55 2 1802 2213 491376533 491376122 1.920000e-121 446
8 TraesCS1D01G402400 chr1A 94.595 74 4 0 1 74 560311580 560311507 6.160000e-22 115
9 TraesCS1D01G402400 chr5D 95.135 370 17 1 2355 2723 46035788 46036157 1.410000e-162 582
10 TraesCS1D01G402400 chr5D 90.041 241 23 1 73 313 273526313 273526074 7.320000e-81 311
11 TraesCS1D01G402400 chr6D 93.784 370 20 3 2355 2723 335344864 335345231 1.100000e-153 553
12 TraesCS1D01G402400 chr6D 90.591 372 33 2 2353 2723 7249755 7249385 2.440000e-135 492
13 TraesCS1D01G402400 chr2B 91.081 370 31 2 2355 2723 790725196 790725564 1.460000e-137 499
14 TraesCS1D01G402400 chr2B 89.702 369 33 3 2356 2723 394005779 394006143 1.480000e-127 466
15 TraesCS1D01G402400 chr2D 91.105 371 28 3 2355 2723 584675292 584674925 5.240000e-137 497
16 TraesCS1D01G402400 chr2D 86.957 414 51 3 1802 2213 645666367 645665955 1.910000e-126 462
17 TraesCS1D01G402400 chr2D 91.176 238 21 0 73 310 620601551 620601788 9.400000e-85 324
18 TraesCS1D01G402400 chr2D 90.123 243 24 0 72 314 56196984 56196742 1.570000e-82 316
19 TraesCS1D01G402400 chr3B 90.503 358 28 4 2366 2723 761708214 761708565 4.110000e-128 468
20 TraesCS1D01G402400 chr2A 86.190 420 56 2 1795 2213 26933189 26932771 1.150000e-123 453
21 TraesCS1D01G402400 chr7A 85.748 428 56 5 1787 2213 10422938 10423361 5.350000e-122 448
22 TraesCS1D01G402400 chr6A 85.612 417 56 4 1798 2213 590370889 590371302 4.160000e-118 435
23 TraesCS1D01G402400 chr6A 89.069 247 25 2 70 314 588600882 588601128 3.410000e-79 305
24 TraesCS1D01G402400 chr7B 85.230 413 59 2 1802 2213 579491011 579491422 9.010000e-115 424
25 TraesCS1D01G402400 chr4B 84.964 419 57 6 1797 2213 39047181 39046767 1.170000e-113 420
26 TraesCS1D01G402400 chr3A 92.083 240 18 1 72 310 75031409 75031648 1.210000e-88 337
27 TraesCS1D01G402400 chr4A 91.632 239 19 1 70 307 625241787 625241549 2.020000e-86 329
28 TraesCS1D01G402400 chr7D 90.123 243 22 2 73 314 29684538 29684297 5.660000e-82 315
29 TraesCS1D01G402400 chr4D 90.000 240 22 2 71 309 315080262 315080500 2.630000e-80 309


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G402400 chr1D 467627997 467630719 2722 False 5029 5029 100.0000 1 2723 1 chr1D.!!$F1 2722
1 TraesCS1D01G402400 chr1B 645529187 645531961 2774 False 1545 2558 92.8060 1 2348 2 chr1B.!!$F2 2347
2 TraesCS1D01G402400 chr1A 560310064 560311580 1516 True 932 1749 91.7155 1 1751 2 chr1A.!!$R2 1750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
761 1193 0.097674 GCACCGAACATGCATCAGAC 59.902 55.0 0.0 0.0 42.88 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 2347 0.034059 CGCTAGGTGATCCATGGACC 59.966 60.0 18.99 15.08 35.89 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 4.661709 ACCTACTAACCTCCCAAAAGACAA 59.338 41.667 0.00 0.00 0.00 3.18
124 125 7.061673 TCACTTCATTTTTCGTGTCAAACTTTG 59.938 33.333 0.00 0.00 0.00 2.77
201 202 8.366401 TCATTGGAAAGTTCTTTGAAATATGCA 58.634 29.630 2.38 0.00 0.00 3.96
246 247 5.576774 GGCATATAACTCACTTTTTGTTGGC 59.423 40.000 0.00 0.00 0.00 4.52
263 264 5.355596 TGTTGGCAAAATTACTGGTCAAAG 58.644 37.500 0.00 0.00 0.00 2.77
378 798 1.546476 CAAGTCTAGACCTTCACCGCT 59.454 52.381 19.38 0.00 0.00 5.52
380 800 0.889306 GTCTAGACCTTCACCGCTGT 59.111 55.000 12.13 0.00 0.00 4.40
579 999 6.239036 GCTTTCCCTGAAATTTCTGTGTAAGT 60.239 38.462 18.64 0.00 30.85 2.24
633 1054 1.401539 GGAGTCAAAACTGCGCATTCC 60.402 52.381 12.24 0.00 35.28 3.01
641 1069 1.077787 CTGCGCATTCCCCTGGTAA 60.078 57.895 12.24 0.00 0.00 2.85
670 1098 8.677300 ACATTTATTTACACATCATGTCCTGTC 58.323 33.333 0.00 0.00 42.09 3.51
676 1108 1.836166 ACATCATGTCCTGTCTCCCAG 59.164 52.381 0.00 0.00 41.15 4.45
680 1112 0.545171 ATGTCCTGTCTCCCAGCATG 59.455 55.000 0.00 0.00 40.06 4.06
693 1125 1.079819 AGCATGGACAGAACGACGG 60.080 57.895 0.00 0.00 0.00 4.79
694 1126 1.080093 GCATGGACAGAACGACGGA 60.080 57.895 0.00 0.00 0.00 4.69
733 1165 5.855395 GTGAACTCAACTAAGTAGTACCACG 59.145 44.000 0.00 0.00 34.99 4.94
758 1190 2.397754 CGGCACCGAACATGCATCA 61.398 57.895 2.01 0.00 45.27 3.07
759 1191 1.430632 GGCACCGAACATGCATCAG 59.569 57.895 0.00 0.00 45.27 2.90
760 1192 1.026182 GGCACCGAACATGCATCAGA 61.026 55.000 0.00 0.00 45.27 3.27
761 1193 0.097674 GCACCGAACATGCATCAGAC 59.902 55.000 0.00 0.00 42.88 3.51
938 1393 5.759273 CCTTTCATCTGCCTAGATCTTTCAG 59.241 44.000 0.00 6.40 41.71 3.02
940 1395 5.528043 TCATCTGCCTAGATCTTTCAGAC 57.472 43.478 17.77 0.00 41.71 3.51
943 1398 3.703556 TCTGCCTAGATCTTTCAGACTGG 59.296 47.826 0.00 0.00 0.00 4.00
1171 1635 1.153489 CCTCACCTGGTGCATCTCG 60.153 63.158 22.02 5.69 32.98 4.04
1229 1693 1.338200 CCTGCACTTGTACTGTCTCCC 60.338 57.143 0.00 0.00 0.00 4.30
1266 1730 1.451567 TCCTCGCCGAGACGAAGAT 60.452 57.895 17.19 0.00 42.39 2.40
1351 1815 2.579860 AGCCATGAGAAAGATGGGACTT 59.420 45.455 0.00 0.00 40.80 3.01
1375 1839 6.154445 TGATTTTGATCAAGAGAAAAGCTGC 58.846 36.000 8.41 0.00 0.00 5.25
1399 1863 7.115805 TGCGAATATATTTCTACGCTTTTCGAT 59.884 33.333 22.21 0.00 44.97 3.59
1408 1872 1.986378 ACGCTTTTCGATGAAGACGAG 59.014 47.619 20.88 10.19 40.72 4.18
1418 1882 0.392706 TGAAGACGAGCCAAGCTTCA 59.607 50.000 0.00 0.00 43.00 3.02
1493 1957 0.447406 TGCATTGGATTTGCGACGAG 59.553 50.000 0.00 0.00 43.10 4.18
1507 1971 1.538512 CGACGAGTCCTCCACAACTTA 59.461 52.381 0.00 0.00 0.00 2.24
1510 1974 1.204941 CGAGTCCTCCACAACTTAGGG 59.795 57.143 0.00 0.00 0.00 3.53
1516 1980 2.355818 CCTCCACAACTTAGGGTTAGGC 60.356 54.545 0.00 0.00 36.23 3.93
1578 2042 9.612066 TGCTAGATATGACATGAACAATAACAA 57.388 29.630 0.00 0.00 0.00 2.83
1583 2047 9.113838 GATATGACATGAACAATAACAAGAGGT 57.886 33.333 0.00 0.00 0.00 3.85
1589 2053 9.520515 ACATGAACAATAACAAGAGGTTAGATT 57.479 29.630 0.00 0.00 44.74 2.40
1618 2082 4.715713 AGTTCACTAAGGTTTTGGAGGAC 58.284 43.478 0.00 0.00 0.00 3.85
1680 2144 7.315890 TCCTATATCTGTGAGATGCATTTACG 58.684 38.462 0.00 0.00 35.37 3.18
1714 2178 1.737236 TGAATTCCGCCACTTGATTCG 59.263 47.619 2.27 0.00 0.00 3.34
1718 2182 0.173481 TCCGCCACTTGATTCGAGAG 59.827 55.000 7.95 0.00 0.00 3.20
1793 2257 2.809665 GCATCTAGCATTGCCACTAGCT 60.810 50.000 4.70 0.00 44.79 3.32
1799 2263 4.162040 AGCATTGCCACTAGCTATCTTT 57.838 40.909 4.70 0.00 44.23 2.52
1800 2264 4.133078 AGCATTGCCACTAGCTATCTTTC 58.867 43.478 4.70 0.00 44.23 2.62
1831 2297 9.727627 ATTGCGAGAGAAATTTTCAATCTATTC 57.272 29.630 11.53 0.00 35.17 1.75
1855 2321 5.164620 TCAATCATGGCAGTACTGAGAAA 57.835 39.130 27.08 8.26 0.00 2.52
1863 2329 3.748568 GGCAGTACTGAGAAAACTTGAGG 59.251 47.826 27.08 0.00 0.00 3.86
1866 2332 5.989777 GCAGTACTGAGAAAACTTGAGGTAA 59.010 40.000 27.08 0.00 0.00 2.85
1867 2333 6.651225 GCAGTACTGAGAAAACTTGAGGTAAT 59.349 38.462 27.08 0.00 0.00 1.89
1868 2334 7.817962 GCAGTACTGAGAAAACTTGAGGTAATA 59.182 37.037 27.08 0.00 0.00 0.98
1869 2335 9.706691 CAGTACTGAGAAAACTTGAGGTAATAA 57.293 33.333 18.45 0.00 0.00 1.40
1872 2338 8.622948 ACTGAGAAAACTTGAGGTAATAAAGG 57.377 34.615 0.00 0.00 0.00 3.11
1873 2339 8.218488 ACTGAGAAAACTTGAGGTAATAAAGGT 58.782 33.333 0.00 0.00 0.00 3.50
1875 2341 9.498176 TGAGAAAACTTGAGGTAATAAAGGTAC 57.502 33.333 0.00 0.00 0.00 3.34
1877 2343 9.856162 AGAAAACTTGAGGTAATAAAGGTACAA 57.144 29.630 0.00 0.00 0.00 2.41
1880 2346 9.802039 AAACTTGAGGTAATAAAGGTACAATCA 57.198 29.630 0.00 0.00 0.00 2.57
1881 2347 9.449719 AACTTGAGGTAATAAAGGTACAATCAG 57.550 33.333 0.00 0.00 0.00 2.90
1882 2348 8.047310 ACTTGAGGTAATAAAGGTACAATCAGG 58.953 37.037 0.00 0.00 0.00 3.86
1883 2349 7.504926 TGAGGTAATAAAGGTACAATCAGGT 57.495 36.000 0.00 0.00 0.00 4.00
1891 2362 3.397527 AGGTACAATCAGGTCCATGGAT 58.602 45.455 19.62 0.00 0.00 3.41
1911 2382 1.736126 TCACCTAGCGACGACTACAAG 59.264 52.381 0.00 0.00 0.00 3.16
1924 2395 1.341531 ACTACAAGCACTGAAGCGAGT 59.658 47.619 0.00 0.00 40.15 4.18
1958 2429 2.764128 TCATCGCCCCTCCCTCAC 60.764 66.667 0.00 0.00 0.00 3.51
1959 2430 4.227134 CATCGCCCCTCCCTCACG 62.227 72.222 0.00 0.00 0.00 4.35
1964 2435 3.151022 CCCCTCCCTCACGAGAGC 61.151 72.222 4.11 0.00 40.68 4.09
1965 2436 2.043450 CCCTCCCTCACGAGAGCT 60.043 66.667 4.11 0.00 40.68 4.09
1969 2440 0.967887 CTCCCTCACGAGAGCTGGAA 60.968 60.000 4.11 0.00 40.68 3.53
1973 2444 2.616510 CCCTCACGAGAGCTGGAAAAAT 60.617 50.000 4.11 0.00 40.68 1.82
1980 2451 4.023707 ACGAGAGCTGGAAAAATCTTGTTG 60.024 41.667 0.00 0.00 33.53 3.33
1986 2457 7.389053 AGAGCTGGAAAAATCTTGTTGTAGTAG 59.611 37.037 0.00 0.00 0.00 2.57
2000 2471 5.948162 TGTTGTAGTAGATAGTCGGGAAGTT 59.052 40.000 0.00 0.00 0.00 2.66
2007 2478 0.038892 TAGTCGGGAAGTTGTCGTGC 60.039 55.000 0.00 0.00 0.00 5.34
2028 2499 1.535204 AAGGCCCCAATGAAACAGCG 61.535 55.000 0.00 0.00 0.00 5.18
2054 2525 1.945394 GAGCAGCAACCATCATCGATT 59.055 47.619 0.00 0.00 0.00 3.34
2055 2526 1.674441 AGCAGCAACCATCATCGATTG 59.326 47.619 0.00 0.00 0.00 2.67
2061 2532 3.493877 GCAACCATCATCGATTGAGAGAG 59.506 47.826 0.00 0.00 37.89 3.20
2072 2543 5.116882 TCGATTGAGAGAGTTGTAGATCGA 58.883 41.667 0.00 0.00 40.96 3.59
2076 2547 7.433719 CGATTGAGAGAGTTGTAGATCGAAAAT 59.566 37.037 0.00 0.00 37.83 1.82
2084 2555 9.653287 AGAGTTGTAGATCGAAAATATCAAACA 57.347 29.630 0.00 0.00 0.00 2.83
2093 2564 9.221775 GATCGAAAATATCAAACATGTAACCAC 57.778 33.333 0.00 0.00 0.00 4.16
2114 2585 4.666176 CACATGAACGAAGACGAACAAAAG 59.334 41.667 0.00 0.00 42.66 2.27
2122 2593 3.409026 AGACGAACAAAAGCTGGATCT 57.591 42.857 0.00 0.00 0.00 2.75
2147 2618 5.936187 ATAGATCCATCGAAGATCAGCAT 57.064 39.130 23.28 13.94 45.12 3.79
2149 2620 3.577415 AGATCCATCGAAGATCAGCATCA 59.423 43.478 23.28 0.00 45.12 3.07
2152 2623 3.133542 TCCATCGAAGATCAGCATCAACT 59.866 43.478 0.00 0.00 45.12 3.16
2162 2633 1.399440 CAGCATCAACTGAATCCCACG 59.601 52.381 0.00 0.00 40.25 4.94
2164 2635 2.092753 AGCATCAACTGAATCCCACGAT 60.093 45.455 0.00 0.00 0.00 3.73
2168 2639 4.336889 TCAACTGAATCCCACGATATCC 57.663 45.455 0.00 0.00 0.00 2.59
2173 2644 1.538512 GAATCCCACGATATCCGACGA 59.461 52.381 0.00 0.00 41.76 4.20
2176 2647 0.949397 CCCACGATATCCGACGAAGA 59.051 55.000 0.00 0.00 41.76 2.87
2189 2660 0.104304 ACGAAGACACACCTCCACAC 59.896 55.000 0.00 0.00 0.00 3.82
2191 2662 1.270305 CGAAGACACACCTCCACACAT 60.270 52.381 0.00 0.00 0.00 3.21
2197 2668 0.693049 ACACCTCCACACATTCCTCC 59.307 55.000 0.00 0.00 0.00 4.30
2203 2674 0.736325 CCACACATTCCTCCGACGAC 60.736 60.000 0.00 0.00 0.00 4.34
2224 2695 2.732597 CGCTATTCGCCACTAGCTATCC 60.733 54.545 0.00 0.00 38.54 2.59
2236 2707 5.167121 CACTAGCTATCCTACATGCATGAC 58.833 45.833 32.75 10.77 0.00 3.06
2295 2766 2.619697 TCATGCAAGATCCCCCAAAA 57.380 45.000 0.00 0.00 0.00 2.44
2296 2767 2.459644 TCATGCAAGATCCCCCAAAAG 58.540 47.619 0.00 0.00 0.00 2.27
2298 2769 2.692709 TGCAAGATCCCCCAAAAGAA 57.307 45.000 0.00 0.00 0.00 2.52
2299 2770 2.247358 TGCAAGATCCCCCAAAAGAAC 58.753 47.619 0.00 0.00 0.00 3.01
2300 2771 2.247358 GCAAGATCCCCCAAAAGAACA 58.753 47.619 0.00 0.00 0.00 3.18
2301 2772 2.029020 GCAAGATCCCCCAAAAGAACAC 60.029 50.000 0.00 0.00 0.00 3.32
2302 2773 3.230134 CAAGATCCCCCAAAAGAACACA 58.770 45.455 0.00 0.00 0.00 3.72
2303 2774 3.833559 AGATCCCCCAAAAGAACACAT 57.166 42.857 0.00 0.00 0.00 3.21
2304 2775 4.946160 AGATCCCCCAAAAGAACACATA 57.054 40.909 0.00 0.00 0.00 2.29
2306 2777 3.163616 TCCCCCAAAAGAACACATACC 57.836 47.619 0.00 0.00 0.00 2.73
2307 2778 2.176045 CCCCCAAAAGAACACATACCC 58.824 52.381 0.00 0.00 0.00 3.69
2348 2819 2.228822 CCAACCAGCATTCAGGTACAAC 59.771 50.000 0.00 0.00 37.07 3.32
2349 2820 2.884012 CAACCAGCATTCAGGTACAACA 59.116 45.455 0.00 0.00 37.07 3.33
2350 2821 2.504367 ACCAGCATTCAGGTACAACAC 58.496 47.619 0.00 0.00 36.07 3.32
2363 2834 3.639561 GGTACAACACCATGAAAAAGGGT 59.360 43.478 0.00 0.00 46.28 4.34
2364 2835 4.100344 GGTACAACACCATGAAAAAGGGTT 59.900 41.667 0.00 0.00 41.19 4.11
2365 2836 4.835284 ACAACACCATGAAAAAGGGTTT 57.165 36.364 0.00 0.00 41.19 3.27
2366 2837 4.765273 ACAACACCATGAAAAAGGGTTTC 58.235 39.130 0.00 0.00 41.19 2.78
2367 2838 4.126437 CAACACCATGAAAAAGGGTTTCC 58.874 43.478 0.00 0.00 41.19 3.13
2368 2839 2.703536 ACACCATGAAAAAGGGTTTCCC 59.296 45.455 0.00 0.00 41.19 3.97
2379 2850 2.670019 GGGTTTCCCCCGCTTTATAT 57.330 50.000 0.00 0.00 45.80 0.86
2380 2851 2.953453 GGGTTTCCCCCGCTTTATATT 58.047 47.619 0.00 0.00 45.80 1.28
2381 2852 4.103013 GGGTTTCCCCCGCTTTATATTA 57.897 45.455 0.00 0.00 45.80 0.98
2382 2853 4.669700 GGGTTTCCCCCGCTTTATATTAT 58.330 43.478 0.00 0.00 45.80 1.28
2383 2854 5.818887 GGGTTTCCCCCGCTTTATATTATA 58.181 41.667 0.00 0.00 45.80 0.98
2384 2855 6.247676 GGGTTTCCCCCGCTTTATATTATAA 58.752 40.000 0.00 0.00 45.80 0.98
2385 2856 6.720748 GGGTTTCCCCCGCTTTATATTATAAA 59.279 38.462 8.26 8.26 45.80 1.40
2386 2857 7.094075 GGGTTTCCCCCGCTTTATATTATAAAG 60.094 40.741 23.28 23.28 45.80 1.85
2400 2871 5.582689 ATTATAAAGCACAACCTCCAAGC 57.417 39.130 0.00 0.00 0.00 4.01
2401 2872 2.356665 TAAAGCACAACCTCCAAGCA 57.643 45.000 0.00 0.00 0.00 3.91
2402 2873 1.708341 AAAGCACAACCTCCAAGCAT 58.292 45.000 0.00 0.00 0.00 3.79
2403 2874 1.251251 AAGCACAACCTCCAAGCATC 58.749 50.000 0.00 0.00 0.00 3.91
2404 2875 0.610232 AGCACAACCTCCAAGCATCC 60.610 55.000 0.00 0.00 0.00 3.51
2405 2876 0.895100 GCACAACCTCCAAGCATCCA 60.895 55.000 0.00 0.00 0.00 3.41
2406 2877 1.619654 CACAACCTCCAAGCATCCAA 58.380 50.000 0.00 0.00 0.00 3.53
2407 2878 1.270550 CACAACCTCCAAGCATCCAAC 59.729 52.381 0.00 0.00 0.00 3.77
2408 2879 1.133513 ACAACCTCCAAGCATCCAACA 60.134 47.619 0.00 0.00 0.00 3.33
2409 2880 1.962807 CAACCTCCAAGCATCCAACAA 59.037 47.619 0.00 0.00 0.00 2.83
2410 2881 1.620822 ACCTCCAAGCATCCAACAAC 58.379 50.000 0.00 0.00 0.00 3.32
2411 2882 1.133513 ACCTCCAAGCATCCAACAACA 60.134 47.619 0.00 0.00 0.00 3.33
2412 2883 2.173519 CCTCCAAGCATCCAACAACAT 58.826 47.619 0.00 0.00 0.00 2.71
2413 2884 3.245229 ACCTCCAAGCATCCAACAACATA 60.245 43.478 0.00 0.00 0.00 2.29
2414 2885 3.763360 CCTCCAAGCATCCAACAACATAA 59.237 43.478 0.00 0.00 0.00 1.90
2415 2886 4.142315 CCTCCAAGCATCCAACAACATAAG 60.142 45.833 0.00 0.00 0.00 1.73
2416 2887 4.661222 TCCAAGCATCCAACAACATAAGA 58.339 39.130 0.00 0.00 0.00 2.10
2417 2888 4.701651 TCCAAGCATCCAACAACATAAGAG 59.298 41.667 0.00 0.00 0.00 2.85
2418 2889 4.460382 CCAAGCATCCAACAACATAAGAGT 59.540 41.667 0.00 0.00 0.00 3.24
2419 2890 5.647658 CCAAGCATCCAACAACATAAGAGTA 59.352 40.000 0.00 0.00 0.00 2.59
2420 2891 6.183360 CCAAGCATCCAACAACATAAGAGTAG 60.183 42.308 0.00 0.00 0.00 2.57
2421 2892 6.054860 AGCATCCAACAACATAAGAGTAGT 57.945 37.500 0.00 0.00 0.00 2.73
2422 2893 7.182817 AGCATCCAACAACATAAGAGTAGTA 57.817 36.000 0.00 0.00 0.00 1.82
2423 2894 7.042335 AGCATCCAACAACATAAGAGTAGTAC 58.958 38.462 0.00 0.00 0.00 2.73
2424 2895 6.816640 GCATCCAACAACATAAGAGTAGTACA 59.183 38.462 2.52 0.00 0.00 2.90
2425 2896 7.010552 GCATCCAACAACATAAGAGTAGTACAG 59.989 40.741 2.52 0.00 0.00 2.74
2426 2897 6.931838 TCCAACAACATAAGAGTAGTACAGG 58.068 40.000 2.52 0.00 0.00 4.00
2427 2898 6.722590 TCCAACAACATAAGAGTAGTACAGGA 59.277 38.462 2.52 0.00 0.00 3.86
2428 2899 6.812160 CCAACAACATAAGAGTAGTACAGGAC 59.188 42.308 2.52 0.00 0.00 3.85
2429 2900 7.375834 CAACAACATAAGAGTAGTACAGGACA 58.624 38.462 2.52 0.00 0.00 4.02
2430 2901 7.159322 ACAACATAAGAGTAGTACAGGACAG 57.841 40.000 2.52 0.00 0.00 3.51
2431 2902 6.946583 ACAACATAAGAGTAGTACAGGACAGA 59.053 38.462 2.52 0.00 0.00 3.41
2432 2903 7.121463 ACAACATAAGAGTAGTACAGGACAGAG 59.879 40.741 2.52 0.00 0.00 3.35
2433 2904 6.723339 ACATAAGAGTAGTACAGGACAGAGT 58.277 40.000 2.52 0.00 0.00 3.24
2434 2905 7.859540 ACATAAGAGTAGTACAGGACAGAGTA 58.140 38.462 2.52 0.00 0.00 2.59
2435 2906 7.769970 ACATAAGAGTAGTACAGGACAGAGTAC 59.230 40.741 2.52 0.00 40.60 2.73
2436 2907 5.758790 AGAGTAGTACAGGACAGAGTACA 57.241 43.478 2.52 0.00 42.26 2.90
2437 2908 5.736813 AGAGTAGTACAGGACAGAGTACAG 58.263 45.833 2.52 0.00 42.26 2.74
2438 2909 5.484644 AGAGTAGTACAGGACAGAGTACAGA 59.515 44.000 2.52 0.00 42.26 3.41
2439 2910 6.013553 AGAGTAGTACAGGACAGAGTACAGAA 60.014 42.308 2.52 0.00 42.26 3.02
2440 2911 6.540995 AGTAGTACAGGACAGAGTACAGAAA 58.459 40.000 2.52 0.00 42.26 2.52
2441 2912 5.968528 AGTACAGGACAGAGTACAGAAAG 57.031 43.478 0.00 0.00 42.26 2.62
2442 2913 3.669251 ACAGGACAGAGTACAGAAAGC 57.331 47.619 0.00 0.00 0.00 3.51
2443 2914 2.965831 ACAGGACAGAGTACAGAAAGCA 59.034 45.455 0.00 0.00 0.00 3.91
2444 2915 3.388024 ACAGGACAGAGTACAGAAAGCAA 59.612 43.478 0.00 0.00 0.00 3.91
2445 2916 4.141711 ACAGGACAGAGTACAGAAAGCAAA 60.142 41.667 0.00 0.00 0.00 3.68
2446 2917 4.999950 CAGGACAGAGTACAGAAAGCAAAT 59.000 41.667 0.00 0.00 0.00 2.32
2447 2918 6.166279 CAGGACAGAGTACAGAAAGCAAATA 58.834 40.000 0.00 0.00 0.00 1.40
2448 2919 6.650807 CAGGACAGAGTACAGAAAGCAAATAA 59.349 38.462 0.00 0.00 0.00 1.40
2449 2920 7.173218 CAGGACAGAGTACAGAAAGCAAATAAA 59.827 37.037 0.00 0.00 0.00 1.40
2450 2921 7.885399 AGGACAGAGTACAGAAAGCAAATAAAT 59.115 33.333 0.00 0.00 0.00 1.40
2451 2922 7.965107 GGACAGAGTACAGAAAGCAAATAAATG 59.035 37.037 0.00 0.00 0.00 2.32
2452 2923 8.621532 ACAGAGTACAGAAAGCAAATAAATGA 57.378 30.769 0.00 0.00 0.00 2.57
2453 2924 8.725148 ACAGAGTACAGAAAGCAAATAAATGAG 58.275 33.333 0.00 0.00 0.00 2.90
2454 2925 8.180267 CAGAGTACAGAAAGCAAATAAATGAGG 58.820 37.037 0.00 0.00 0.00 3.86
2455 2926 7.885399 AGAGTACAGAAAGCAAATAAATGAGGT 59.115 33.333 0.00 0.00 0.00 3.85
2456 2927 8.045176 AGTACAGAAAGCAAATAAATGAGGTC 57.955 34.615 0.00 0.00 0.00 3.85
2457 2928 6.272822 ACAGAAAGCAAATAAATGAGGTCC 57.727 37.500 0.00 0.00 0.00 4.46
2458 2929 5.106157 ACAGAAAGCAAATAAATGAGGTCCG 60.106 40.000 0.00 0.00 0.00 4.79
2459 2930 4.399303 AGAAAGCAAATAAATGAGGTCCGG 59.601 41.667 0.00 0.00 0.00 5.14
2460 2931 2.024414 AGCAAATAAATGAGGTCCGGC 58.976 47.619 0.00 0.00 0.00 6.13
2461 2932 2.024414 GCAAATAAATGAGGTCCGGCT 58.976 47.619 0.00 0.00 0.00 5.52
2462 2933 2.223572 GCAAATAAATGAGGTCCGGCTG 60.224 50.000 0.00 0.00 0.00 4.85
2463 2934 2.348411 AATAAATGAGGTCCGGCTGG 57.652 50.000 4.71 4.71 0.00 4.85
2464 2935 0.474184 ATAAATGAGGTCCGGCTGGG 59.526 55.000 12.87 0.00 35.24 4.45
2465 2936 1.632018 TAAATGAGGTCCGGCTGGGG 61.632 60.000 12.87 0.00 36.01 4.96
2483 2954 2.029518 GCACAGCCAAACAAGCCC 59.970 61.111 0.00 0.00 0.00 5.19
2484 2955 2.736531 CACAGCCAAACAAGCCCC 59.263 61.111 0.00 0.00 0.00 5.80
2485 2956 2.132996 CACAGCCAAACAAGCCCCA 61.133 57.895 0.00 0.00 0.00 4.96
2486 2957 1.382420 ACAGCCAAACAAGCCCCAA 60.382 52.632 0.00 0.00 0.00 4.12
2487 2958 1.069596 CAGCCAAACAAGCCCCAAC 59.930 57.895 0.00 0.00 0.00 3.77
2488 2959 1.075301 AGCCAAACAAGCCCCAACT 60.075 52.632 0.00 0.00 0.00 3.16
2489 2960 0.187361 AGCCAAACAAGCCCCAACTA 59.813 50.000 0.00 0.00 0.00 2.24
2490 2961 0.317160 GCCAAACAAGCCCCAACTAC 59.683 55.000 0.00 0.00 0.00 2.73
2491 2962 1.698506 CCAAACAAGCCCCAACTACA 58.301 50.000 0.00 0.00 0.00 2.74
2492 2963 2.035632 CCAAACAAGCCCCAACTACAA 58.964 47.619 0.00 0.00 0.00 2.41
2493 2964 2.035832 CCAAACAAGCCCCAACTACAAG 59.964 50.000 0.00 0.00 0.00 3.16
2494 2965 1.995376 AACAAGCCCCAACTACAAGG 58.005 50.000 0.00 0.00 0.00 3.61
2495 2966 1.145571 ACAAGCCCCAACTACAAGGA 58.854 50.000 0.00 0.00 0.00 3.36
2496 2967 1.497286 ACAAGCCCCAACTACAAGGAA 59.503 47.619 0.00 0.00 0.00 3.36
2497 2968 2.091555 ACAAGCCCCAACTACAAGGAAA 60.092 45.455 0.00 0.00 0.00 3.13
2498 2969 2.962421 CAAGCCCCAACTACAAGGAAAA 59.038 45.455 0.00 0.00 0.00 2.29
2499 2970 2.876581 AGCCCCAACTACAAGGAAAAG 58.123 47.619 0.00 0.00 0.00 2.27
2500 2971 2.445525 AGCCCCAACTACAAGGAAAAGA 59.554 45.455 0.00 0.00 0.00 2.52
2501 2972 3.117284 AGCCCCAACTACAAGGAAAAGAA 60.117 43.478 0.00 0.00 0.00 2.52
2502 2973 3.005472 GCCCCAACTACAAGGAAAAGAAC 59.995 47.826 0.00 0.00 0.00 3.01
2503 2974 4.470602 CCCCAACTACAAGGAAAAGAACT 58.529 43.478 0.00 0.00 0.00 3.01
2504 2975 4.519350 CCCCAACTACAAGGAAAAGAACTC 59.481 45.833 0.00 0.00 0.00 3.01
2505 2976 5.377478 CCCAACTACAAGGAAAAGAACTCT 58.623 41.667 0.00 0.00 0.00 3.24
2506 2977 6.465321 CCCCAACTACAAGGAAAAGAACTCTA 60.465 42.308 0.00 0.00 0.00 2.43
2507 2978 6.651225 CCCAACTACAAGGAAAAGAACTCTAG 59.349 42.308 0.00 0.00 0.00 2.43
2508 2979 7.217906 CCAACTACAAGGAAAAGAACTCTAGT 58.782 38.462 0.00 0.00 0.00 2.57
2509 2980 7.385478 CCAACTACAAGGAAAAGAACTCTAGTC 59.615 40.741 0.00 0.00 0.00 2.59
2510 2981 7.598759 ACTACAAGGAAAAGAACTCTAGTCA 57.401 36.000 0.00 0.00 0.00 3.41
2511 2982 8.019656 ACTACAAGGAAAAGAACTCTAGTCAA 57.980 34.615 0.00 0.00 0.00 3.18
2512 2983 8.145122 ACTACAAGGAAAAGAACTCTAGTCAAG 58.855 37.037 0.00 0.00 0.00 3.02
2513 2984 5.760743 ACAAGGAAAAGAACTCTAGTCAAGC 59.239 40.000 0.00 0.00 0.00 4.01
2514 2985 5.816955 AGGAAAAGAACTCTAGTCAAGCT 57.183 39.130 0.00 0.00 0.00 3.74
2515 2986 5.789521 AGGAAAAGAACTCTAGTCAAGCTC 58.210 41.667 0.00 0.00 0.00 4.09
2516 2987 4.932799 GGAAAAGAACTCTAGTCAAGCTCC 59.067 45.833 0.00 0.00 0.00 4.70
2517 2988 3.859411 AAGAACTCTAGTCAAGCTCCG 57.141 47.619 0.00 0.00 0.00 4.63
2518 2989 2.096248 AGAACTCTAGTCAAGCTCCGG 58.904 52.381 0.00 0.00 0.00 5.14
2519 2990 1.819903 GAACTCTAGTCAAGCTCCGGT 59.180 52.381 0.00 0.00 0.00 5.28
2520 2991 1.178276 ACTCTAGTCAAGCTCCGGTG 58.822 55.000 0.00 0.00 0.00 4.94
2521 2992 0.457851 CTCTAGTCAAGCTCCGGTGG 59.542 60.000 0.00 0.00 0.00 4.61
2522 2993 0.251653 TCTAGTCAAGCTCCGGTGGT 60.252 55.000 0.00 0.35 0.00 4.16
2523 2994 0.108615 CTAGTCAAGCTCCGGTGGTG 60.109 60.000 9.27 4.14 0.00 4.17
2524 2995 1.541310 TAGTCAAGCTCCGGTGGTGG 61.541 60.000 9.27 6.35 0.00 4.61
2525 2996 2.847234 TCAAGCTCCGGTGGTGGT 60.847 61.111 9.27 0.00 0.00 4.16
2526 2997 2.669569 CAAGCTCCGGTGGTGGTG 60.670 66.667 9.27 0.87 0.00 4.17
2527 2998 3.953775 AAGCTCCGGTGGTGGTGG 61.954 66.667 9.27 0.00 0.00 4.61
2530 3001 4.329545 CTCCGGTGGTGGTGGTGG 62.330 72.222 0.00 0.00 0.00 4.61
2532 3003 4.947147 CCGGTGGTGGTGGTGGTG 62.947 72.222 0.00 0.00 0.00 4.17
2533 3004 3.867783 CGGTGGTGGTGGTGGTGA 61.868 66.667 0.00 0.00 0.00 4.02
2534 3005 2.843545 GGTGGTGGTGGTGGTGAT 59.156 61.111 0.00 0.00 0.00 3.06
2535 3006 1.603455 GGTGGTGGTGGTGGTGATG 60.603 63.158 0.00 0.00 0.00 3.07
2536 3007 1.603455 GTGGTGGTGGTGGTGATGG 60.603 63.158 0.00 0.00 0.00 3.51
2537 3008 2.676471 GGTGGTGGTGGTGATGGC 60.676 66.667 0.00 0.00 0.00 4.40
2538 3009 3.055719 GTGGTGGTGGTGATGGCG 61.056 66.667 0.00 0.00 0.00 5.69
2539 3010 4.343323 TGGTGGTGGTGATGGCGG 62.343 66.667 0.00 0.00 0.00 6.13
2543 3014 4.796495 GGTGGTGATGGCGGGGAC 62.796 72.222 0.00 0.00 0.00 4.46
2544 3015 4.028490 GTGGTGATGGCGGGGACA 62.028 66.667 0.00 0.00 0.00 4.02
2545 3016 3.014538 TGGTGATGGCGGGGACAT 61.015 61.111 0.00 0.00 31.76 3.06
2557 3028 4.492160 GGACATCGCGACAGCCGA 62.492 66.667 12.93 0.00 41.76 5.54
2558 3029 2.506217 GACATCGCGACAGCCGAA 60.506 61.111 12.93 0.00 41.76 4.30
2559 3030 2.507102 ACATCGCGACAGCCGAAG 60.507 61.111 12.93 0.00 41.76 3.79
2560 3031 2.202610 CATCGCGACAGCCGAAGA 60.203 61.111 12.93 0.00 41.76 2.87
2561 3032 1.805539 CATCGCGACAGCCGAAGAA 60.806 57.895 12.93 0.00 41.76 2.52
2562 3033 1.805945 ATCGCGACAGCCGAAGAAC 60.806 57.895 12.93 0.00 41.76 3.01
2563 3034 3.827784 CGCGACAGCCGAAGAACG 61.828 66.667 0.00 0.00 41.76 3.95
2564 3035 2.430244 GCGACAGCCGAAGAACGA 60.430 61.111 0.00 0.00 45.77 3.85
2565 3036 2.019951 GCGACAGCCGAAGAACGAA 61.020 57.895 0.00 0.00 45.77 3.85
2566 3037 1.945776 GCGACAGCCGAAGAACGAAG 61.946 60.000 0.00 0.00 45.77 3.79
2567 3038 0.386858 CGACAGCCGAAGAACGAAGA 60.387 55.000 0.00 0.00 45.77 2.87
2568 3039 1.061485 GACAGCCGAAGAACGAAGAC 58.939 55.000 0.00 0.00 45.77 3.01
2569 3040 0.319641 ACAGCCGAAGAACGAAGACC 60.320 55.000 0.00 0.00 45.77 3.85
2570 3041 1.080705 AGCCGAAGAACGAAGACCG 60.081 57.895 0.00 0.00 45.77 4.79
2571 3042 2.092882 GCCGAAGAACGAAGACCGG 61.093 63.158 0.00 0.00 45.77 5.28
2572 3043 2.092882 CCGAAGAACGAAGACCGGC 61.093 63.158 0.00 0.00 45.77 6.13
2573 3044 2.434134 CGAAGAACGAAGACCGGCG 61.434 63.158 0.00 0.00 45.77 6.46
2574 3045 1.080974 GAAGAACGAAGACCGGCGA 60.081 57.895 9.30 0.00 43.93 5.54
2575 3046 1.342796 GAAGAACGAAGACCGGCGAC 61.343 60.000 9.30 1.53 43.93 5.19
2587 3058 4.835927 GGCGACGATGGAGTCAAT 57.164 55.556 0.00 0.00 40.98 2.57
2588 3059 2.301505 GGCGACGATGGAGTCAATG 58.698 57.895 0.00 0.00 40.98 2.82
2589 3060 1.154205 GGCGACGATGGAGTCAATGG 61.154 60.000 0.00 0.00 40.98 3.16
2590 3061 0.179111 GCGACGATGGAGTCAATGGA 60.179 55.000 0.00 0.00 40.98 3.41
2591 3062 1.845266 CGACGATGGAGTCAATGGAG 58.155 55.000 0.00 0.00 40.98 3.86
2592 3063 1.576356 GACGATGGAGTCAATGGAGC 58.424 55.000 0.00 0.00 40.65 4.70
2593 3064 0.179000 ACGATGGAGTCAATGGAGCC 59.821 55.000 0.00 0.00 0.00 4.70
2594 3065 0.178767 CGATGGAGTCAATGGAGCCA 59.821 55.000 0.00 0.00 34.33 4.75
2595 3066 1.673168 GATGGAGTCAATGGAGCCAC 58.327 55.000 0.00 0.00 33.08 5.01
2596 3067 0.107508 ATGGAGTCAATGGAGCCACG 60.108 55.000 0.00 0.00 33.08 4.94
2597 3068 1.191489 TGGAGTCAATGGAGCCACGA 61.191 55.000 0.00 0.00 0.00 4.35
2598 3069 0.179000 GGAGTCAATGGAGCCACGAT 59.821 55.000 0.00 0.00 0.00 3.73
2599 3070 1.576356 GAGTCAATGGAGCCACGATC 58.424 55.000 0.00 0.00 0.00 3.69
2600 3071 0.904649 AGTCAATGGAGCCACGATCA 59.095 50.000 0.00 0.00 0.00 2.92
2601 3072 1.009829 GTCAATGGAGCCACGATCAC 58.990 55.000 0.00 0.00 0.00 3.06
2602 3073 0.612744 TCAATGGAGCCACGATCACA 59.387 50.000 0.00 0.00 0.00 3.58
2603 3074 0.729116 CAATGGAGCCACGATCACAC 59.271 55.000 0.00 0.00 0.00 3.82
2604 3075 0.392998 AATGGAGCCACGATCACACC 60.393 55.000 0.00 0.00 0.00 4.16
2605 3076 2.509336 GGAGCCACGATCACACCG 60.509 66.667 0.00 0.00 0.00 4.94
2606 3077 3.188786 GAGCCACGATCACACCGC 61.189 66.667 0.00 0.00 0.00 5.68
2607 3078 3.649277 GAGCCACGATCACACCGCT 62.649 63.158 0.00 0.00 0.00 5.52
2608 3079 2.742372 GCCACGATCACACCGCTT 60.742 61.111 0.00 0.00 0.00 4.68
2609 3080 3.027170 GCCACGATCACACCGCTTG 62.027 63.158 0.00 0.00 0.00 4.01
2610 3081 2.476051 CACGATCACACCGCTTGC 59.524 61.111 0.00 0.00 0.00 4.01
2611 3082 2.029288 CACGATCACACCGCTTGCT 61.029 57.895 0.00 0.00 0.00 3.91
2612 3083 0.735978 CACGATCACACCGCTTGCTA 60.736 55.000 0.00 0.00 0.00 3.49
2613 3084 0.037697 ACGATCACACCGCTTGCTAA 60.038 50.000 0.00 0.00 0.00 3.09
2614 3085 0.647410 CGATCACACCGCTTGCTAAG 59.353 55.000 0.00 0.00 0.00 2.18
2622 3093 3.801129 GCTTGCTAAGCGGTCTCC 58.199 61.111 5.35 0.00 45.74 3.71
2623 3094 1.079127 GCTTGCTAAGCGGTCTCCA 60.079 57.895 5.35 0.00 45.74 3.86
2624 3095 1.086634 GCTTGCTAAGCGGTCTCCAG 61.087 60.000 5.35 0.00 45.74 3.86
2625 3096 0.532573 CTTGCTAAGCGGTCTCCAGA 59.467 55.000 0.00 0.00 0.00 3.86
2626 3097 0.532573 TTGCTAAGCGGTCTCCAGAG 59.467 55.000 0.00 0.00 0.00 3.35
2627 3098 1.227118 GCTAAGCGGTCTCCAGAGC 60.227 63.158 0.00 0.00 39.04 4.09
2628 3099 1.671901 GCTAAGCGGTCTCCAGAGCT 61.672 60.000 4.36 0.00 42.35 4.09
2629 3100 0.102120 CTAAGCGGTCTCCAGAGCTG 59.898 60.000 0.00 0.00 40.17 4.24
2630 3101 0.612174 TAAGCGGTCTCCAGAGCTGT 60.612 55.000 0.00 0.00 40.17 4.40
2631 3102 0.612174 AAGCGGTCTCCAGAGCTGTA 60.612 55.000 0.00 0.00 40.17 2.74
2632 3103 1.034838 AGCGGTCTCCAGAGCTGTAG 61.035 60.000 0.00 0.00 40.17 2.74
2633 3104 1.032657 GCGGTCTCCAGAGCTGTAGA 61.033 60.000 0.00 0.00 40.17 2.59
2634 3105 1.464734 CGGTCTCCAGAGCTGTAGAA 58.535 55.000 0.00 0.00 40.17 2.10
2635 3106 1.819288 CGGTCTCCAGAGCTGTAGAAA 59.181 52.381 0.00 0.00 40.17 2.52
2636 3107 2.428890 CGGTCTCCAGAGCTGTAGAAAT 59.571 50.000 0.00 0.00 40.17 2.17
2637 3108 3.490078 CGGTCTCCAGAGCTGTAGAAATC 60.490 52.174 0.00 0.00 40.17 2.17
2638 3109 3.181470 GGTCTCCAGAGCTGTAGAAATCC 60.181 52.174 0.00 0.00 39.31 3.01
2639 3110 3.449018 GTCTCCAGAGCTGTAGAAATCCA 59.551 47.826 0.00 0.00 27.19 3.41
2640 3111 3.449018 TCTCCAGAGCTGTAGAAATCCAC 59.551 47.826 0.00 0.00 0.00 4.02
2641 3112 3.173151 TCCAGAGCTGTAGAAATCCACA 58.827 45.455 0.00 0.00 0.00 4.17
2642 3113 3.055819 TCCAGAGCTGTAGAAATCCACAC 60.056 47.826 0.00 0.00 0.00 3.82
2643 3114 3.306989 CCAGAGCTGTAGAAATCCACACA 60.307 47.826 0.00 0.00 0.00 3.72
2644 3115 4.511527 CAGAGCTGTAGAAATCCACACAT 58.488 43.478 0.00 0.00 0.00 3.21
2645 3116 4.940046 CAGAGCTGTAGAAATCCACACATT 59.060 41.667 0.00 0.00 0.00 2.71
2646 3117 5.413833 CAGAGCTGTAGAAATCCACACATTT 59.586 40.000 0.00 0.00 0.00 2.32
2647 3118 6.006449 AGAGCTGTAGAAATCCACACATTTT 58.994 36.000 0.00 0.00 0.00 1.82
2648 3119 7.119699 CAGAGCTGTAGAAATCCACACATTTTA 59.880 37.037 0.00 0.00 0.00 1.52
2649 3120 7.665559 AGAGCTGTAGAAATCCACACATTTTAA 59.334 33.333 0.00 0.00 0.00 1.52
2650 3121 8.177119 AGCTGTAGAAATCCACACATTTTAAA 57.823 30.769 0.00 0.00 0.00 1.52
2651 3122 8.299570 AGCTGTAGAAATCCACACATTTTAAAG 58.700 33.333 0.00 0.00 0.00 1.85
2652 3123 8.296713 GCTGTAGAAATCCACACATTTTAAAGA 58.703 33.333 0.00 0.00 0.00 2.52
2655 3126 9.573133 GTAGAAATCCACACATTTTAAAGATGG 57.427 33.333 12.13 6.96 0.00 3.51
2656 3127 7.099120 AGAAATCCACACATTTTAAAGATGGC 58.901 34.615 12.13 0.00 0.00 4.40
2657 3128 4.433186 TCCACACATTTTAAAGATGGCG 57.567 40.909 12.13 7.40 0.00 5.69
2658 3129 3.823873 TCCACACATTTTAAAGATGGCGT 59.176 39.130 12.13 7.81 0.00 5.68
2659 3130 4.083003 TCCACACATTTTAAAGATGGCGTC 60.083 41.667 0.00 0.00 0.00 5.19
2660 3131 4.320861 CCACACATTTTAAAGATGGCGTCA 60.321 41.667 9.78 0.00 0.00 4.35
2661 3132 4.853196 CACACATTTTAAAGATGGCGTCAG 59.147 41.667 9.78 0.00 0.00 3.51
2662 3133 4.518970 ACACATTTTAAAGATGGCGTCAGT 59.481 37.500 9.78 0.00 0.00 3.41
2663 3134 4.853196 CACATTTTAAAGATGGCGTCAGTG 59.147 41.667 9.78 0.00 0.00 3.66
2664 3135 4.759693 ACATTTTAAAGATGGCGTCAGTGA 59.240 37.500 9.78 0.00 0.00 3.41
2665 3136 4.742438 TTTTAAAGATGGCGTCAGTGAC 57.258 40.909 13.56 13.56 0.00 3.67
2666 3137 3.394674 TTAAAGATGGCGTCAGTGACA 57.605 42.857 22.66 4.20 32.09 3.58
2667 3138 1.512926 AAAGATGGCGTCAGTGACAC 58.487 50.000 22.66 13.29 32.09 3.67
2668 3139 0.392706 AAGATGGCGTCAGTGACACA 59.607 50.000 22.66 19.58 32.09 3.72
2669 3140 0.392706 AGATGGCGTCAGTGACACAA 59.607 50.000 22.66 7.49 32.09 3.33
2670 3141 0.512952 GATGGCGTCAGTGACACAAC 59.487 55.000 22.66 14.88 32.09 3.32
2671 3142 0.179059 ATGGCGTCAGTGACACAACA 60.179 50.000 22.66 14.64 32.09 3.33
2672 3143 0.391793 TGGCGTCAGTGACACAACAA 60.392 50.000 22.66 0.12 32.09 2.83
2673 3144 0.304705 GGCGTCAGTGACACAACAAG 59.695 55.000 22.66 5.95 32.09 3.16
2674 3145 0.304705 GCGTCAGTGACACAACAAGG 59.695 55.000 22.66 5.24 32.09 3.61
2675 3146 1.934589 CGTCAGTGACACAACAAGGA 58.065 50.000 22.66 0.00 32.09 3.36
2676 3147 2.276201 CGTCAGTGACACAACAAGGAA 58.724 47.619 22.66 0.00 32.09 3.36
2677 3148 2.872245 CGTCAGTGACACAACAAGGAAT 59.128 45.455 22.66 0.00 32.09 3.01
2678 3149 3.303329 CGTCAGTGACACAACAAGGAATG 60.303 47.826 22.66 0.00 32.09 2.67
2679 3150 3.876914 GTCAGTGACACAACAAGGAATGA 59.123 43.478 18.54 0.00 32.09 2.57
2680 3151 3.876914 TCAGTGACACAACAAGGAATGAC 59.123 43.478 8.59 0.00 0.00 3.06
2681 3152 3.627123 CAGTGACACAACAAGGAATGACA 59.373 43.478 8.59 0.00 0.00 3.58
2682 3153 4.276678 CAGTGACACAACAAGGAATGACAT 59.723 41.667 8.59 0.00 0.00 3.06
2683 3154 4.276678 AGTGACACAACAAGGAATGACATG 59.723 41.667 8.59 0.00 0.00 3.21
2684 3155 3.004629 TGACACAACAAGGAATGACATGC 59.995 43.478 0.00 0.00 0.00 4.06
2685 3156 3.225104 ACACAACAAGGAATGACATGCT 58.775 40.909 0.00 0.00 0.00 3.79
2686 3157 3.638160 ACACAACAAGGAATGACATGCTT 59.362 39.130 0.00 0.00 0.00 3.91
2692 3163 4.978083 AAGGAATGACATGCTTGATCAC 57.022 40.909 6.60 0.00 29.04 3.06
2693 3164 4.232188 AGGAATGACATGCTTGATCACT 57.768 40.909 6.60 0.00 0.00 3.41
2694 3165 5.363562 AGGAATGACATGCTTGATCACTA 57.636 39.130 6.60 0.00 0.00 2.74
2695 3166 5.748402 AGGAATGACATGCTTGATCACTAA 58.252 37.500 6.60 0.00 0.00 2.24
2696 3167 6.363065 AGGAATGACATGCTTGATCACTAAT 58.637 36.000 6.60 0.00 0.00 1.73
2697 3168 6.832384 AGGAATGACATGCTTGATCACTAATT 59.168 34.615 6.60 0.00 0.00 1.40
2698 3169 7.341256 AGGAATGACATGCTTGATCACTAATTT 59.659 33.333 6.60 0.00 0.00 1.82
2699 3170 8.623903 GGAATGACATGCTTGATCACTAATTTA 58.376 33.333 6.60 0.00 0.00 1.40
2702 3173 8.735692 TGACATGCTTGATCACTAATTTATCA 57.264 30.769 6.60 0.00 0.00 2.15
2703 3174 8.615211 TGACATGCTTGATCACTAATTTATCAC 58.385 33.333 6.60 0.00 29.64 3.06
2704 3175 7.633621 ACATGCTTGATCACTAATTTATCACG 58.366 34.615 6.60 0.00 29.64 4.35
2705 3176 7.495606 ACATGCTTGATCACTAATTTATCACGA 59.504 33.333 6.60 0.00 29.64 4.35
2706 3177 7.234187 TGCTTGATCACTAATTTATCACGAC 57.766 36.000 0.00 0.00 29.64 4.34
2707 3178 6.816140 TGCTTGATCACTAATTTATCACGACA 59.184 34.615 0.00 0.00 29.64 4.35
2708 3179 7.010460 TGCTTGATCACTAATTTATCACGACAG 59.990 37.037 0.00 0.00 29.64 3.51
2709 3180 7.010552 GCTTGATCACTAATTTATCACGACAGT 59.989 37.037 0.00 0.00 29.64 3.55
2710 3181 8.771920 TTGATCACTAATTTATCACGACAGTT 57.228 30.769 0.00 0.00 29.64 3.16
2711 3182 8.407457 TGATCACTAATTTATCACGACAGTTC 57.593 34.615 0.00 0.00 0.00 3.01
2712 3183 7.491372 TGATCACTAATTTATCACGACAGTTCC 59.509 37.037 0.00 0.00 0.00 3.62
2713 3184 6.693466 TCACTAATTTATCACGACAGTTCCA 58.307 36.000 0.00 0.00 0.00 3.53
2714 3185 6.811665 TCACTAATTTATCACGACAGTTCCAG 59.188 38.462 0.00 0.00 0.00 3.86
2715 3186 6.811665 CACTAATTTATCACGACAGTTCCAGA 59.188 38.462 0.00 0.00 0.00 3.86
2716 3187 7.009631 CACTAATTTATCACGACAGTTCCAGAG 59.990 40.741 0.00 0.00 0.00 3.35
2717 3188 3.868757 TTATCACGACAGTTCCAGAGG 57.131 47.619 0.00 0.00 0.00 3.69
2718 3189 0.898320 ATCACGACAGTTCCAGAGGG 59.102 55.000 0.00 0.00 0.00 4.30
2719 3190 0.469331 TCACGACAGTTCCAGAGGGT 60.469 55.000 0.00 0.00 34.93 4.34
2720 3191 0.038159 CACGACAGTTCCAGAGGGTC 60.038 60.000 0.00 0.00 34.93 4.46
2721 3192 1.186267 ACGACAGTTCCAGAGGGTCC 61.186 60.000 0.00 0.00 34.93 4.46
2722 3193 1.185618 CGACAGTTCCAGAGGGTCCA 61.186 60.000 0.00 0.00 34.93 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 6.434340 GGAATGAAGGGAGTACTTGAACAAAT 59.566 38.462 0.00 0.00 0.00 2.32
176 177 8.537049 TGCATATTTCAAAGAACTTTCCAATG 57.463 30.769 0.00 0.52 0.00 2.82
263 264 8.903820 AGGCCACTTCATATTTTTATGTCTAAC 58.096 33.333 5.01 0.00 0.00 2.34
274 275 7.823745 CCTTATACAAGGCCACTTCATATTT 57.176 36.000 5.01 0.00 44.90 1.40
378 798 6.172630 TCAAGATGATTCCGATTTCTTGACA 58.827 36.000 9.03 0.00 44.31 3.58
380 800 6.172630 TGTCAAGATGATTCCGATTTCTTGA 58.827 36.000 9.03 9.03 45.97 3.02
495 915 0.626382 TCGAGACCTGAGGGACATCT 59.374 55.000 2.38 0.00 36.25 2.90
496 916 1.611491 GATCGAGACCTGAGGGACATC 59.389 57.143 2.38 0.00 36.25 3.06
497 917 1.063642 TGATCGAGACCTGAGGGACAT 60.064 52.381 2.38 0.00 36.25 3.06
627 1048 2.507407 TGTTCTTACCAGGGGAATGC 57.493 50.000 0.00 0.00 0.00 3.56
633 1054 8.343168 TGTGTAAATAAATGTTCTTACCAGGG 57.657 34.615 0.00 0.00 0.00 4.45
641 1069 9.466497 AGGACATGATGTGTAAATAAATGTTCT 57.534 29.630 1.23 0.00 42.36 3.01
670 1098 0.742281 CGTTCTGTCCATGCTGGGAG 60.742 60.000 0.00 0.00 38.32 4.30
676 1108 1.078759 CTCCGTCGTTCTGTCCATGC 61.079 60.000 0.00 0.00 0.00 4.06
680 1112 2.126031 GGCTCCGTCGTTCTGTCC 60.126 66.667 0.00 0.00 0.00 4.02
685 1117 2.029964 TGGTTGGCTCCGTCGTTC 59.970 61.111 0.00 0.00 0.00 3.95
691 1123 2.111043 ACACTGTGGTTGGCTCCG 59.889 61.111 13.09 0.00 0.00 4.63
693 1125 2.024918 CACACACTGTGGTTGGCTC 58.975 57.895 13.77 0.00 44.27 4.70
694 1126 4.240881 CACACACTGTGGTTGGCT 57.759 55.556 13.77 0.00 44.27 4.75
733 1165 3.799755 GTTCGGTGCCGCCATGAC 61.800 66.667 5.64 0.00 39.59 3.06
758 1190 0.535102 CCTCCCACACGCAAAAGTCT 60.535 55.000 0.00 0.00 0.00 3.24
759 1191 0.534203 TCCTCCCACACGCAAAAGTC 60.534 55.000 0.00 0.00 0.00 3.01
760 1192 0.535102 CTCCTCCCACACGCAAAAGT 60.535 55.000 0.00 0.00 0.00 2.66
761 1193 0.250295 TCTCCTCCCACACGCAAAAG 60.250 55.000 0.00 0.00 0.00 2.27
938 1393 1.527311 GCTTCAACGACAGAACCAGTC 59.473 52.381 0.00 0.00 0.00 3.51
940 1395 1.871080 AGCTTCAACGACAGAACCAG 58.129 50.000 0.00 0.00 0.00 4.00
943 1398 3.363084 GCTTGTAGCTTCAACGACAGAAC 60.363 47.826 1.07 0.00 38.45 3.01
948 1403 1.797025 AGGCTTGTAGCTTCAACGAC 58.203 50.000 1.07 1.49 41.99 4.34
949 1404 2.823747 TCTAGGCTTGTAGCTTCAACGA 59.176 45.455 1.07 0.00 41.99 3.85
950 1405 3.232213 TCTAGGCTTGTAGCTTCAACG 57.768 47.619 1.07 0.66 41.99 4.10
1101 1565 1.895131 GGAAAAGTGGTGCATGATGGT 59.105 47.619 0.00 0.00 0.00 3.55
1266 1730 5.105106 TCACTCTTATTTGGTGCCTTCGATA 60.105 40.000 0.00 0.00 0.00 2.92
1351 1815 6.154445 GCAGCTTTTCTCTTGATCAAAATCA 58.846 36.000 9.88 0.00 40.18 2.57
1375 1839 8.635983 TCATCGAAAAGCGTAGAAATATATTCG 58.364 33.333 0.00 0.00 41.80 3.34
1399 1863 0.392706 TGAAGCTTGGCTCGTCTTCA 59.607 50.000 2.10 0.00 41.57 3.02
1402 1866 0.321122 CCTTGAAGCTTGGCTCGTCT 60.321 55.000 2.10 0.00 38.25 4.18
1408 1872 1.609208 TCACTTCCTTGAAGCTTGGC 58.391 50.000 2.10 0.00 42.79 4.52
1418 1882 5.511888 CCAAGAATGCCATTTTCACTTCCTT 60.512 40.000 0.00 0.00 0.00 3.36
1493 1957 3.055312 CCTAACCCTAAGTTGTGGAGGAC 60.055 52.174 0.00 0.00 39.67 3.85
1507 1971 3.301222 TACCCGGTCGCCTAACCCT 62.301 63.158 0.00 0.00 35.79 4.34
1510 1974 2.789715 CCCTACCCGGTCGCCTAAC 61.790 68.421 0.00 0.00 0.00 2.34
1574 2038 6.784031 ACTCCATCAAATCTAACCTCTTGTT 58.216 36.000 0.00 0.00 41.11 2.83
1578 2042 6.214412 AGTGAACTCCATCAAATCTAACCTCT 59.786 38.462 0.00 0.00 0.00 3.69
1583 2047 7.918076 ACCTTAGTGAACTCCATCAAATCTAA 58.082 34.615 0.00 0.00 0.00 2.10
1589 2053 5.534654 CCAAAACCTTAGTGAACTCCATCAA 59.465 40.000 0.00 0.00 0.00 2.57
1618 2082 2.206576 AAGGGGTCTAGCAAAAGCTG 57.793 50.000 0.00 0.00 0.00 4.24
1680 2144 4.466828 CGGAATTCAGTCAATCACAACAC 58.533 43.478 7.93 0.00 0.00 3.32
1714 2178 6.166982 ACAACAGACCAGTTATTTAGCTCTC 58.833 40.000 0.00 0.00 0.00 3.20
1764 2228 2.381911 CAATGCTAGATGCCAAACCCT 58.618 47.619 0.00 0.00 42.00 4.34
1774 2238 4.776837 AGATAGCTAGTGGCAATGCTAGAT 59.223 41.667 18.53 13.26 44.79 1.98
1799 2263 9.912634 ATTGAAAATTTCTCTCGCAATAAAAGA 57.087 25.926 7.29 0.00 0.00 2.52
1831 2297 4.700700 TCTCAGTACTGCCATGATTGATG 58.299 43.478 18.45 0.00 0.00 3.07
1855 2321 9.449719 CTGATTGTACCTTTATTACCTCAAGTT 57.550 33.333 0.00 0.00 0.00 2.66
1863 2329 7.228706 CCATGGACCTGATTGTACCTTTATTAC 59.771 40.741 5.56 0.00 0.00 1.89
1866 2332 5.431731 TCCATGGACCTGATTGTACCTTTAT 59.568 40.000 11.44 0.00 0.00 1.40
1867 2333 4.785914 TCCATGGACCTGATTGTACCTTTA 59.214 41.667 11.44 0.00 0.00 1.85
1868 2334 3.591527 TCCATGGACCTGATTGTACCTTT 59.408 43.478 11.44 0.00 0.00 3.11
1869 2335 3.189606 TCCATGGACCTGATTGTACCTT 58.810 45.455 11.44 0.00 0.00 3.50
1871 2337 3.136443 TGATCCATGGACCTGATTGTACC 59.864 47.826 18.99 0.00 0.00 3.34
1872 2338 4.130118 GTGATCCATGGACCTGATTGTAC 58.870 47.826 18.99 0.00 0.00 2.90
1873 2339 3.136443 GGTGATCCATGGACCTGATTGTA 59.864 47.826 18.99 0.00 0.00 2.41
1875 2341 2.174210 AGGTGATCCATGGACCTGATTG 59.826 50.000 18.99 0.00 38.73 2.67
1877 2343 2.203120 AGGTGATCCATGGACCTGAT 57.797 50.000 18.99 0.00 38.73 2.90
1879 2345 1.071385 GCTAGGTGATCCATGGACCTG 59.929 57.143 26.57 18.83 40.45 4.00
1880 2346 1.428869 GCTAGGTGATCCATGGACCT 58.571 55.000 23.27 23.27 42.87 3.85
1881 2347 0.034059 CGCTAGGTGATCCATGGACC 59.966 60.000 18.99 15.08 35.89 4.46
1882 2348 1.040646 TCGCTAGGTGATCCATGGAC 58.959 55.000 18.99 11.83 35.89 4.02
1883 2349 1.040646 GTCGCTAGGTGATCCATGGA 58.959 55.000 18.88 18.88 35.89 3.41
1891 2362 1.736126 CTTGTAGTCGTCGCTAGGTGA 59.264 52.381 0.00 0.00 0.00 4.02
1911 2382 1.347817 CCTTCGACTCGCTTCAGTGC 61.348 60.000 0.00 0.00 0.00 4.40
1958 2429 4.023707 ACAACAAGATTTTTCCAGCTCTCG 60.024 41.667 0.00 0.00 0.00 4.04
1959 2430 5.444663 ACAACAAGATTTTTCCAGCTCTC 57.555 39.130 0.00 0.00 0.00 3.20
1969 2440 7.980099 CCCGACTATCTACTACAACAAGATTTT 59.020 37.037 0.00 0.00 32.39 1.82
1973 2444 5.748402 TCCCGACTATCTACTACAACAAGA 58.252 41.667 0.00 0.00 0.00 3.02
1980 2451 5.277250 CGACAACTTCCCGACTATCTACTAC 60.277 48.000 0.00 0.00 0.00 2.73
1986 2457 2.527100 CACGACAACTTCCCGACTATC 58.473 52.381 0.00 0.00 0.00 2.08
1992 2463 1.068474 CTTAGCACGACAACTTCCCG 58.932 55.000 0.00 0.00 0.00 5.14
2000 2471 1.847798 ATTGGGGCCTTAGCACGACA 61.848 55.000 0.84 0.00 46.55 4.35
2007 2478 1.478105 GCTGTTTCATTGGGGCCTTAG 59.522 52.381 0.84 0.00 0.00 2.18
2028 2499 1.930908 GATGGTTGCTGCTCTGGTGC 61.931 60.000 0.00 0.00 0.00 5.01
2054 2525 8.903820 TGATATTTTCGATCTACAACTCTCTCA 58.096 33.333 0.00 0.00 0.00 3.27
2055 2526 9.737427 TTGATATTTTCGATCTACAACTCTCTC 57.263 33.333 0.00 0.00 0.00 3.20
2061 2532 9.988350 ACATGTTTGATATTTTCGATCTACAAC 57.012 29.630 0.00 0.00 0.00 3.32
2084 2555 4.559906 TCGTCTTCGTTCATGTGGTTACAT 60.560 41.667 0.00 0.00 41.87 2.29
2093 2564 3.659444 GCTTTTGTTCGTCTTCGTTCATG 59.341 43.478 0.00 0.00 38.33 3.07
2122 2593 7.232118 TGCTGATCTTCGATGGATCTATTTA 57.768 36.000 21.39 7.57 39.95 1.40
2142 2613 1.399440 CGTGGGATTCAGTTGATGCTG 59.601 52.381 0.00 0.00 37.81 4.41
2147 2618 3.243737 CGGATATCGTGGGATTCAGTTGA 60.244 47.826 0.00 0.00 34.00 3.18
2149 2620 2.963101 TCGGATATCGTGGGATTCAGTT 59.037 45.455 0.00 0.00 40.32 3.16
2152 2623 1.268625 CGTCGGATATCGTGGGATTCA 59.731 52.381 0.00 0.00 40.32 2.57
2160 2631 2.011947 TGTGTCTTCGTCGGATATCGT 58.988 47.619 0.00 0.00 40.32 3.73
2162 2633 2.358267 AGGTGTGTCTTCGTCGGATATC 59.642 50.000 0.00 0.00 0.00 1.63
2164 2635 1.741706 GAGGTGTGTCTTCGTCGGATA 59.258 52.381 0.00 0.00 0.00 2.59
2168 2639 0.663568 GTGGAGGTGTGTCTTCGTCG 60.664 60.000 0.00 0.00 0.00 5.12
2173 2644 2.487265 GGAATGTGTGGAGGTGTGTCTT 60.487 50.000 0.00 0.00 0.00 3.01
2176 2647 1.072331 GAGGAATGTGTGGAGGTGTGT 59.928 52.381 0.00 0.00 0.00 3.72
2189 2660 0.311165 ATAGCGTCGTCGGAGGAATG 59.689 55.000 3.90 0.00 37.56 2.67
2191 2662 0.379669 GAATAGCGTCGTCGGAGGAA 59.620 55.000 3.90 0.00 37.56 3.36
2224 2695 3.242969 GCAATCCACAGTCATGCATGTAG 60.243 47.826 25.43 17.84 37.00 2.74
2291 2762 5.008217 TCTCAAACGGGTATGTGTTCTTTTG 59.992 40.000 0.00 0.00 0.00 2.44
2295 2766 4.062991 GTTCTCAAACGGGTATGTGTTCT 58.937 43.478 0.00 0.00 0.00 3.01
2296 2767 4.062991 AGTTCTCAAACGGGTATGTGTTC 58.937 43.478 0.00 0.00 40.48 3.18
2298 2769 3.399330 CAGTTCTCAAACGGGTATGTGT 58.601 45.455 0.00 0.00 40.48 3.72
2299 2770 2.742053 CCAGTTCTCAAACGGGTATGTG 59.258 50.000 0.07 0.00 43.40 3.21
2300 2771 2.635915 TCCAGTTCTCAAACGGGTATGT 59.364 45.455 7.23 0.00 46.97 2.29
2301 2772 3.328382 TCCAGTTCTCAAACGGGTATG 57.672 47.619 7.23 0.00 46.97 2.39
2302 2773 3.263425 ACATCCAGTTCTCAAACGGGTAT 59.737 43.478 7.23 0.00 46.97 2.73
2303 2774 2.635915 ACATCCAGTTCTCAAACGGGTA 59.364 45.455 7.23 0.00 46.97 3.69
2304 2775 1.420138 ACATCCAGTTCTCAAACGGGT 59.580 47.619 7.23 0.00 46.97 5.28
2306 2777 3.000727 GGTACATCCAGTTCTCAAACGG 58.999 50.000 0.00 0.00 40.48 4.44
2307 2778 3.000727 GGGTACATCCAGTTCTCAAACG 58.999 50.000 0.00 0.00 40.48 3.60
2362 2833 7.310664 GCTTTATAATATAAAGCGGGGGAAAC 58.689 38.462 30.20 11.52 46.31 2.78
2363 2834 7.457024 GCTTTATAATATAAAGCGGGGGAAA 57.543 36.000 30.20 1.00 46.31 3.13
2374 2845 8.846211 GCTTGGAGGTTGTGCTTTATAATATAA 58.154 33.333 0.00 0.00 0.00 0.98
2375 2846 7.996066 TGCTTGGAGGTTGTGCTTTATAATATA 59.004 33.333 0.00 0.00 0.00 0.86
2376 2847 6.833416 TGCTTGGAGGTTGTGCTTTATAATAT 59.167 34.615 0.00 0.00 0.00 1.28
2377 2848 6.184068 TGCTTGGAGGTTGTGCTTTATAATA 58.816 36.000 0.00 0.00 0.00 0.98
2378 2849 5.016173 TGCTTGGAGGTTGTGCTTTATAAT 58.984 37.500 0.00 0.00 0.00 1.28
2379 2850 4.402829 TGCTTGGAGGTTGTGCTTTATAA 58.597 39.130 0.00 0.00 0.00 0.98
2380 2851 4.027674 TGCTTGGAGGTTGTGCTTTATA 57.972 40.909 0.00 0.00 0.00 0.98
2381 2852 2.875296 TGCTTGGAGGTTGTGCTTTAT 58.125 42.857 0.00 0.00 0.00 1.40
2382 2853 2.356665 TGCTTGGAGGTTGTGCTTTA 57.643 45.000 0.00 0.00 0.00 1.85
2383 2854 1.615392 GATGCTTGGAGGTTGTGCTTT 59.385 47.619 0.00 0.00 0.00 3.51
2384 2855 1.251251 GATGCTTGGAGGTTGTGCTT 58.749 50.000 0.00 0.00 0.00 3.91
2385 2856 0.610232 GGATGCTTGGAGGTTGTGCT 60.610 55.000 0.00 0.00 0.00 4.40
2386 2857 0.895100 TGGATGCTTGGAGGTTGTGC 60.895 55.000 0.00 0.00 0.00 4.57
2387 2858 1.270550 GTTGGATGCTTGGAGGTTGTG 59.729 52.381 0.00 0.00 0.00 3.33
2388 2859 1.133513 TGTTGGATGCTTGGAGGTTGT 60.134 47.619 0.00 0.00 0.00 3.32
2389 2860 1.619654 TGTTGGATGCTTGGAGGTTG 58.380 50.000 0.00 0.00 0.00 3.77
2390 2861 1.963515 GTTGTTGGATGCTTGGAGGTT 59.036 47.619 0.00 0.00 0.00 3.50
2391 2862 1.133513 TGTTGTTGGATGCTTGGAGGT 60.134 47.619 0.00 0.00 0.00 3.85
2392 2863 1.619654 TGTTGTTGGATGCTTGGAGG 58.380 50.000 0.00 0.00 0.00 4.30
2393 2864 4.701651 TCTTATGTTGTTGGATGCTTGGAG 59.298 41.667 0.00 0.00 0.00 3.86
2394 2865 4.661222 TCTTATGTTGTTGGATGCTTGGA 58.339 39.130 0.00 0.00 0.00 3.53
2395 2866 4.460382 ACTCTTATGTTGTTGGATGCTTGG 59.540 41.667 0.00 0.00 0.00 3.61
2396 2867 5.633830 ACTCTTATGTTGTTGGATGCTTG 57.366 39.130 0.00 0.00 0.00 4.01
2397 2868 6.476378 ACTACTCTTATGTTGTTGGATGCTT 58.524 36.000 0.00 0.00 0.00 3.91
2398 2869 6.054860 ACTACTCTTATGTTGTTGGATGCT 57.945 37.500 0.00 0.00 0.00 3.79
2399 2870 6.816640 TGTACTACTCTTATGTTGTTGGATGC 59.183 38.462 0.00 0.00 0.00 3.91
2400 2871 7.492669 CCTGTACTACTCTTATGTTGTTGGATG 59.507 40.741 0.00 0.00 0.00 3.51
2401 2872 7.399191 TCCTGTACTACTCTTATGTTGTTGGAT 59.601 37.037 0.00 0.00 0.00 3.41
2402 2873 6.722590 TCCTGTACTACTCTTATGTTGTTGGA 59.277 38.462 0.00 0.00 0.00 3.53
2403 2874 6.812160 GTCCTGTACTACTCTTATGTTGTTGG 59.188 42.308 0.00 0.00 0.00 3.77
2404 2875 7.375834 TGTCCTGTACTACTCTTATGTTGTTG 58.624 38.462 0.00 0.00 0.00 3.33
2405 2876 7.450634 TCTGTCCTGTACTACTCTTATGTTGTT 59.549 37.037 0.00 0.00 0.00 2.83
2406 2877 6.946583 TCTGTCCTGTACTACTCTTATGTTGT 59.053 38.462 0.00 0.00 0.00 3.32
2407 2878 7.121463 ACTCTGTCCTGTACTACTCTTATGTTG 59.879 40.741 0.00 0.00 0.00 3.33
2408 2879 7.176490 ACTCTGTCCTGTACTACTCTTATGTT 58.824 38.462 0.00 0.00 0.00 2.71
2409 2880 6.723339 ACTCTGTCCTGTACTACTCTTATGT 58.277 40.000 0.00 0.00 0.00 2.29
2410 2881 7.769507 TGTACTCTGTCCTGTACTACTCTTATG 59.230 40.741 0.00 0.00 39.57 1.90
2411 2882 7.859540 TGTACTCTGTCCTGTACTACTCTTAT 58.140 38.462 0.00 0.00 39.57 1.73
2412 2883 7.179872 TCTGTACTCTGTCCTGTACTACTCTTA 59.820 40.741 0.00 0.00 39.57 2.10
2413 2884 6.013553 TCTGTACTCTGTCCTGTACTACTCTT 60.014 42.308 0.00 0.00 39.57 2.85
2414 2885 5.484644 TCTGTACTCTGTCCTGTACTACTCT 59.515 44.000 0.00 0.00 39.57 3.24
2415 2886 5.732633 TCTGTACTCTGTCCTGTACTACTC 58.267 45.833 0.00 0.00 39.57 2.59
2416 2887 5.758790 TCTGTACTCTGTCCTGTACTACT 57.241 43.478 0.00 0.00 39.57 2.57
2417 2888 6.623331 GCTTTCTGTACTCTGTCCTGTACTAC 60.623 46.154 0.00 0.00 39.57 2.73
2418 2889 5.415077 GCTTTCTGTACTCTGTCCTGTACTA 59.585 44.000 0.00 0.00 39.57 1.82
2419 2890 4.218852 GCTTTCTGTACTCTGTCCTGTACT 59.781 45.833 0.00 0.00 39.57 2.73
2420 2891 4.022242 TGCTTTCTGTACTCTGTCCTGTAC 60.022 45.833 0.00 0.00 39.37 2.90
2421 2892 4.149598 TGCTTTCTGTACTCTGTCCTGTA 58.850 43.478 0.00 0.00 0.00 2.74
2422 2893 2.965831 TGCTTTCTGTACTCTGTCCTGT 59.034 45.455 0.00 0.00 0.00 4.00
2423 2894 3.667497 TGCTTTCTGTACTCTGTCCTG 57.333 47.619 0.00 0.00 0.00 3.86
2424 2895 4.689612 TTTGCTTTCTGTACTCTGTCCT 57.310 40.909 0.00 0.00 0.00 3.85
2425 2896 7.435068 TTTATTTGCTTTCTGTACTCTGTCC 57.565 36.000 0.00 0.00 0.00 4.02
2426 2897 8.721478 TCATTTATTTGCTTTCTGTACTCTGTC 58.279 33.333 0.00 0.00 0.00 3.51
2427 2898 8.621532 TCATTTATTTGCTTTCTGTACTCTGT 57.378 30.769 0.00 0.00 0.00 3.41
2428 2899 8.180267 CCTCATTTATTTGCTTTCTGTACTCTG 58.820 37.037 0.00 0.00 0.00 3.35
2429 2900 7.885399 ACCTCATTTATTTGCTTTCTGTACTCT 59.115 33.333 0.00 0.00 0.00 3.24
2430 2901 8.045176 ACCTCATTTATTTGCTTTCTGTACTC 57.955 34.615 0.00 0.00 0.00 2.59
2431 2902 7.121315 GGACCTCATTTATTTGCTTTCTGTACT 59.879 37.037 0.00 0.00 0.00 2.73
2432 2903 7.251281 GGACCTCATTTATTTGCTTTCTGTAC 58.749 38.462 0.00 0.00 0.00 2.90
2433 2904 6.093495 CGGACCTCATTTATTTGCTTTCTGTA 59.907 38.462 0.00 0.00 0.00 2.74
2434 2905 5.106157 CGGACCTCATTTATTTGCTTTCTGT 60.106 40.000 0.00 0.00 0.00 3.41
2435 2906 5.335127 CGGACCTCATTTATTTGCTTTCTG 58.665 41.667 0.00 0.00 0.00 3.02
2436 2907 4.399303 CCGGACCTCATTTATTTGCTTTCT 59.601 41.667 0.00 0.00 0.00 2.52
2437 2908 4.672409 CCGGACCTCATTTATTTGCTTTC 58.328 43.478 0.00 0.00 0.00 2.62
2438 2909 3.119137 GCCGGACCTCATTTATTTGCTTT 60.119 43.478 5.05 0.00 0.00 3.51
2439 2910 2.427095 GCCGGACCTCATTTATTTGCTT 59.573 45.455 5.05 0.00 0.00 3.91
2440 2911 2.024414 GCCGGACCTCATTTATTTGCT 58.976 47.619 5.05 0.00 0.00 3.91
2441 2912 2.024414 AGCCGGACCTCATTTATTTGC 58.976 47.619 5.05 0.00 0.00 3.68
2442 2913 2.358898 CCAGCCGGACCTCATTTATTTG 59.641 50.000 5.05 0.00 0.00 2.32
2443 2914 2.654863 CCAGCCGGACCTCATTTATTT 58.345 47.619 5.05 0.00 0.00 1.40
2444 2915 1.133792 CCCAGCCGGACCTCATTTATT 60.134 52.381 5.05 0.00 0.00 1.40
2445 2916 0.474184 CCCAGCCGGACCTCATTTAT 59.526 55.000 5.05 0.00 0.00 1.40
2446 2917 1.632018 CCCCAGCCGGACCTCATTTA 61.632 60.000 5.05 0.00 0.00 1.40
2447 2918 2.677228 CCCAGCCGGACCTCATTT 59.323 61.111 5.05 0.00 0.00 2.32
2448 2919 3.411517 CCCCAGCCGGACCTCATT 61.412 66.667 5.05 0.00 0.00 2.57
2466 2937 2.029518 GGGCTTGTTTGGCTGTGC 59.970 61.111 0.00 0.00 0.00 4.57
2467 2938 1.684386 TTGGGGCTTGTTTGGCTGTG 61.684 55.000 0.00 0.00 0.00 3.66
2468 2939 1.382420 TTGGGGCTTGTTTGGCTGT 60.382 52.632 0.00 0.00 0.00 4.40
2469 2940 1.069596 GTTGGGGCTTGTTTGGCTG 59.930 57.895 0.00 0.00 0.00 4.85
2470 2941 0.187361 TAGTTGGGGCTTGTTTGGCT 59.813 50.000 0.00 0.00 0.00 4.75
2471 2942 0.317160 GTAGTTGGGGCTTGTTTGGC 59.683 55.000 0.00 0.00 0.00 4.52
2472 2943 1.698506 TGTAGTTGGGGCTTGTTTGG 58.301 50.000 0.00 0.00 0.00 3.28
2473 2944 2.035832 CCTTGTAGTTGGGGCTTGTTTG 59.964 50.000 0.00 0.00 0.00 2.93
2474 2945 2.091555 TCCTTGTAGTTGGGGCTTGTTT 60.092 45.455 0.00 0.00 0.00 2.83
2475 2946 1.497286 TCCTTGTAGTTGGGGCTTGTT 59.503 47.619 0.00 0.00 0.00 2.83
2476 2947 1.145571 TCCTTGTAGTTGGGGCTTGT 58.854 50.000 0.00 0.00 0.00 3.16
2477 2948 2.286365 TTCCTTGTAGTTGGGGCTTG 57.714 50.000 0.00 0.00 0.00 4.01
2478 2949 3.117284 TCTTTTCCTTGTAGTTGGGGCTT 60.117 43.478 0.00 0.00 0.00 4.35
2479 2950 2.445525 TCTTTTCCTTGTAGTTGGGGCT 59.554 45.455 0.00 0.00 0.00 5.19
2480 2951 2.871453 TCTTTTCCTTGTAGTTGGGGC 58.129 47.619 0.00 0.00 0.00 5.80
2481 2952 4.470602 AGTTCTTTTCCTTGTAGTTGGGG 58.529 43.478 0.00 0.00 0.00 4.96
2482 2953 5.377478 AGAGTTCTTTTCCTTGTAGTTGGG 58.623 41.667 0.00 0.00 0.00 4.12
2483 2954 7.217906 ACTAGAGTTCTTTTCCTTGTAGTTGG 58.782 38.462 0.00 0.00 0.00 3.77
2484 2955 7.926555 TGACTAGAGTTCTTTTCCTTGTAGTTG 59.073 37.037 0.00 0.00 0.00 3.16
2485 2956 8.019656 TGACTAGAGTTCTTTTCCTTGTAGTT 57.980 34.615 0.00 0.00 0.00 2.24
2486 2957 7.598759 TGACTAGAGTTCTTTTCCTTGTAGT 57.401 36.000 0.00 0.00 0.00 2.73
2487 2958 7.117092 GCTTGACTAGAGTTCTTTTCCTTGTAG 59.883 40.741 0.00 0.00 0.00 2.74
2488 2959 6.929606 GCTTGACTAGAGTTCTTTTCCTTGTA 59.070 38.462 0.00 0.00 0.00 2.41
2489 2960 5.760743 GCTTGACTAGAGTTCTTTTCCTTGT 59.239 40.000 0.00 0.00 0.00 3.16
2490 2961 5.994668 AGCTTGACTAGAGTTCTTTTCCTTG 59.005 40.000 0.00 0.00 0.00 3.61
2491 2962 6.181206 AGCTTGACTAGAGTTCTTTTCCTT 57.819 37.500 0.00 0.00 0.00 3.36
2492 2963 5.279758 GGAGCTTGACTAGAGTTCTTTTCCT 60.280 44.000 0.00 0.00 0.00 3.36
2493 2964 4.932799 GGAGCTTGACTAGAGTTCTTTTCC 59.067 45.833 0.00 0.00 0.00 3.13
2494 2965 4.623595 CGGAGCTTGACTAGAGTTCTTTTC 59.376 45.833 0.00 0.00 0.00 2.29
2495 2966 4.561105 CGGAGCTTGACTAGAGTTCTTTT 58.439 43.478 0.00 0.00 0.00 2.27
2496 2967 3.056465 CCGGAGCTTGACTAGAGTTCTTT 60.056 47.826 0.00 0.00 0.00 2.52
2497 2968 2.494073 CCGGAGCTTGACTAGAGTTCTT 59.506 50.000 0.00 0.00 0.00 2.52
2498 2969 2.096248 CCGGAGCTTGACTAGAGTTCT 58.904 52.381 0.00 0.00 0.00 3.01
2499 2970 1.819903 ACCGGAGCTTGACTAGAGTTC 59.180 52.381 9.46 0.00 0.00 3.01
2500 2971 1.546476 CACCGGAGCTTGACTAGAGTT 59.454 52.381 9.46 0.00 0.00 3.01
2501 2972 1.178276 CACCGGAGCTTGACTAGAGT 58.822 55.000 9.46 0.00 0.00 3.24
2502 2973 0.457851 CCACCGGAGCTTGACTAGAG 59.542 60.000 9.46 0.00 0.00 2.43
2503 2974 0.251653 ACCACCGGAGCTTGACTAGA 60.252 55.000 9.46 0.00 0.00 2.43
2504 2975 0.108615 CACCACCGGAGCTTGACTAG 60.109 60.000 9.46 0.00 0.00 2.57
2505 2976 1.541310 CCACCACCGGAGCTTGACTA 61.541 60.000 9.46 0.00 0.00 2.59
2506 2977 2.743718 CACCACCGGAGCTTGACT 59.256 61.111 9.46 0.00 0.00 3.41
2507 2978 2.358737 CCACCACCGGAGCTTGAC 60.359 66.667 9.46 0.00 0.00 3.18
2508 2979 2.847234 ACCACCACCGGAGCTTGA 60.847 61.111 9.46 0.00 0.00 3.02
2509 2980 2.669569 CACCACCACCGGAGCTTG 60.670 66.667 9.46 0.00 0.00 4.01
2510 2981 3.953775 CCACCACCACCGGAGCTT 61.954 66.667 9.46 0.00 0.00 3.74
2513 2984 4.329545 CCACCACCACCACCGGAG 62.330 72.222 9.46 0.00 0.00 4.63
2515 2986 4.947147 CACCACCACCACCACCGG 62.947 72.222 0.00 0.00 0.00 5.28
2516 2987 3.190738 ATCACCACCACCACCACCG 62.191 63.158 0.00 0.00 0.00 4.94
2517 2988 1.603455 CATCACCACCACCACCACC 60.603 63.158 0.00 0.00 0.00 4.61
2518 2989 1.603455 CCATCACCACCACCACCAC 60.603 63.158 0.00 0.00 0.00 4.16
2519 2990 2.842801 CCATCACCACCACCACCA 59.157 61.111 0.00 0.00 0.00 4.17
2520 2991 2.676471 GCCATCACCACCACCACC 60.676 66.667 0.00 0.00 0.00 4.61
2521 2992 3.055719 CGCCATCACCACCACCAC 61.056 66.667 0.00 0.00 0.00 4.16
2522 2993 4.343323 CCGCCATCACCACCACCA 62.343 66.667 0.00 0.00 0.00 4.17
2526 2997 4.796495 GTCCCCGCCATCACCACC 62.796 72.222 0.00 0.00 0.00 4.61
2527 2998 3.344137 ATGTCCCCGCCATCACCAC 62.344 63.158 0.00 0.00 0.00 4.16
2528 2999 3.014538 ATGTCCCCGCCATCACCA 61.015 61.111 0.00 0.00 0.00 4.17
2529 3000 2.203209 GATGTCCCCGCCATCACC 60.203 66.667 0.00 0.00 38.82 4.02
2530 3001 2.588877 CGATGTCCCCGCCATCAC 60.589 66.667 0.00 0.00 38.90 3.06
2531 3002 4.545706 GCGATGTCCCCGCCATCA 62.546 66.667 0.00 0.00 46.22 3.07
2540 3011 3.982372 TTCGGCTGTCGCGATGTCC 62.982 63.158 14.06 12.62 39.05 4.02
2541 3012 2.506217 TTCGGCTGTCGCGATGTC 60.506 61.111 14.06 9.50 39.05 3.06
2542 3013 2.486636 TTCTTCGGCTGTCGCGATGT 62.487 55.000 14.06 0.00 39.05 3.06
2543 3014 1.805539 TTCTTCGGCTGTCGCGATG 60.806 57.895 14.06 10.09 39.05 3.84
2544 3015 1.805945 GTTCTTCGGCTGTCGCGAT 60.806 57.895 14.06 0.00 39.05 4.58
2545 3016 2.430244 GTTCTTCGGCTGTCGCGA 60.430 61.111 3.71 3.71 39.05 5.87
2546 3017 3.827784 CGTTCTTCGGCTGTCGCG 61.828 66.667 0.00 0.00 39.05 5.87
2547 3018 1.945776 CTTCGTTCTTCGGCTGTCGC 61.946 60.000 0.00 0.00 40.32 5.19
2548 3019 0.386858 TCTTCGTTCTTCGGCTGTCG 60.387 55.000 0.00 0.00 40.32 4.35
2549 3020 1.061485 GTCTTCGTTCTTCGGCTGTC 58.939 55.000 0.00 0.00 40.32 3.51
2550 3021 0.319641 GGTCTTCGTTCTTCGGCTGT 60.320 55.000 0.00 0.00 40.32 4.40
2551 3022 1.344942 CGGTCTTCGTTCTTCGGCTG 61.345 60.000 0.00 0.00 40.32 4.85
2552 3023 1.080705 CGGTCTTCGTTCTTCGGCT 60.081 57.895 0.00 0.00 40.32 5.52
2553 3024 2.092882 CCGGTCTTCGTTCTTCGGC 61.093 63.158 0.00 0.00 40.32 5.54
2554 3025 2.092882 GCCGGTCTTCGTTCTTCGG 61.093 63.158 1.90 0.00 40.32 4.30
2555 3026 2.434134 CGCCGGTCTTCGTTCTTCG 61.434 63.158 1.90 0.00 41.41 3.79
2556 3027 1.080974 TCGCCGGTCTTCGTTCTTC 60.081 57.895 1.90 0.00 37.11 2.87
2557 3028 1.372623 GTCGCCGGTCTTCGTTCTT 60.373 57.895 1.90 0.00 37.11 2.52
2558 3029 2.257676 GTCGCCGGTCTTCGTTCT 59.742 61.111 1.90 0.00 37.11 3.01
2559 3030 2.862347 ATCGTCGCCGGTCTTCGTTC 62.862 60.000 1.90 0.00 37.11 3.95
2560 3031 2.986306 ATCGTCGCCGGTCTTCGTT 61.986 57.895 1.90 0.00 37.11 3.85
2561 3032 3.437795 ATCGTCGCCGGTCTTCGT 61.438 61.111 1.90 0.00 37.11 3.85
2562 3033 2.949678 CATCGTCGCCGGTCTTCG 60.950 66.667 1.90 3.65 38.88 3.79
2563 3034 2.582498 CCATCGTCGCCGGTCTTC 60.582 66.667 1.90 0.00 33.95 2.87
2564 3035 3.064987 CTCCATCGTCGCCGGTCTT 62.065 63.158 1.90 0.00 33.95 3.01
2565 3036 3.518998 CTCCATCGTCGCCGGTCT 61.519 66.667 1.90 0.00 33.95 3.85
2566 3037 3.753070 GACTCCATCGTCGCCGGTC 62.753 68.421 1.90 0.00 33.95 4.79
2567 3038 3.823330 GACTCCATCGTCGCCGGT 61.823 66.667 1.90 0.00 33.95 5.28
2568 3039 2.629050 ATTGACTCCATCGTCGCCGG 62.629 60.000 0.00 0.00 36.71 6.13
2569 3040 1.226974 ATTGACTCCATCGTCGCCG 60.227 57.895 0.00 0.00 36.71 6.46
2570 3041 1.154205 CCATTGACTCCATCGTCGCC 61.154 60.000 0.00 0.00 36.71 5.54
2571 3042 0.179111 TCCATTGACTCCATCGTCGC 60.179 55.000 0.00 0.00 36.71 5.19
2572 3043 1.845266 CTCCATTGACTCCATCGTCG 58.155 55.000 0.00 0.00 36.71 5.12
2573 3044 1.576356 GCTCCATTGACTCCATCGTC 58.424 55.000 0.00 0.00 34.52 4.20
2574 3045 0.179000 GGCTCCATTGACTCCATCGT 59.821 55.000 0.00 0.00 0.00 3.73
2575 3046 0.178767 TGGCTCCATTGACTCCATCG 59.821 55.000 0.00 0.00 0.00 3.84
2576 3047 1.673168 GTGGCTCCATTGACTCCATC 58.327 55.000 0.00 0.00 0.00 3.51
2577 3048 0.107508 CGTGGCTCCATTGACTCCAT 60.108 55.000 0.00 0.00 0.00 3.41
2578 3049 1.191489 TCGTGGCTCCATTGACTCCA 61.191 55.000 0.00 0.00 0.00 3.86
2579 3050 0.179000 ATCGTGGCTCCATTGACTCC 59.821 55.000 0.00 0.00 0.00 3.85
2580 3051 1.134699 TGATCGTGGCTCCATTGACTC 60.135 52.381 0.00 0.00 0.00 3.36
2581 3052 0.904649 TGATCGTGGCTCCATTGACT 59.095 50.000 0.00 0.00 0.00 3.41
2582 3053 1.009829 GTGATCGTGGCTCCATTGAC 58.990 55.000 0.00 0.00 0.00 3.18
2583 3054 0.612744 TGTGATCGTGGCTCCATTGA 59.387 50.000 0.00 0.00 0.00 2.57
2584 3055 0.729116 GTGTGATCGTGGCTCCATTG 59.271 55.000 0.00 0.00 0.00 2.82
2585 3056 0.392998 GGTGTGATCGTGGCTCCATT 60.393 55.000 0.00 0.00 0.00 3.16
2586 3057 1.221840 GGTGTGATCGTGGCTCCAT 59.778 57.895 0.00 0.00 0.00 3.41
2587 3058 2.662596 GGTGTGATCGTGGCTCCA 59.337 61.111 0.00 0.00 0.00 3.86
2588 3059 2.509336 CGGTGTGATCGTGGCTCC 60.509 66.667 0.00 0.00 0.00 4.70
2589 3060 3.188786 GCGGTGTGATCGTGGCTC 61.189 66.667 0.00 0.00 0.00 4.70
2590 3061 3.240134 AAGCGGTGTGATCGTGGCT 62.240 57.895 0.00 0.00 0.00 4.75
2591 3062 2.742372 AAGCGGTGTGATCGTGGC 60.742 61.111 0.00 0.00 0.00 5.01
2592 3063 3.027170 GCAAGCGGTGTGATCGTGG 62.027 63.158 0.00 0.00 0.00 4.94
2593 3064 0.735978 TAGCAAGCGGTGTGATCGTG 60.736 55.000 0.00 0.00 0.00 4.35
2594 3065 0.037697 TTAGCAAGCGGTGTGATCGT 60.038 50.000 0.00 0.00 0.00 3.73
2595 3066 0.647410 CTTAGCAAGCGGTGTGATCG 59.353 55.000 0.00 0.00 0.00 3.69
2596 3067 0.375106 GCTTAGCAAGCGGTGTGATC 59.625 55.000 0.00 0.00 45.74 2.92
2597 3068 2.471255 GCTTAGCAAGCGGTGTGAT 58.529 52.632 0.00 0.00 45.74 3.06
2598 3069 3.966215 GCTTAGCAAGCGGTGTGA 58.034 55.556 0.00 0.00 45.74 3.58
2606 3077 0.532573 TCTGGAGACCGCTTAGCAAG 59.467 55.000 4.70 0.00 0.00 4.01
2607 3078 0.532573 CTCTGGAGACCGCTTAGCAA 59.467 55.000 4.70 0.00 0.00 3.91
2608 3079 1.949847 GCTCTGGAGACCGCTTAGCA 61.950 60.000 4.70 0.00 0.00 3.49
2609 3080 1.227118 GCTCTGGAGACCGCTTAGC 60.227 63.158 1.35 0.00 0.00 3.09
2610 3081 0.102120 CAGCTCTGGAGACCGCTTAG 59.898 60.000 1.35 0.00 0.00 2.18
2611 3082 0.612174 ACAGCTCTGGAGACCGCTTA 60.612 55.000 1.35 0.00 34.19 3.09
2612 3083 0.612174 TACAGCTCTGGAGACCGCTT 60.612 55.000 1.35 0.00 34.19 4.68
2613 3084 1.000771 TACAGCTCTGGAGACCGCT 60.001 57.895 1.35 0.00 34.19 5.52
2614 3085 1.032657 TCTACAGCTCTGGAGACCGC 61.033 60.000 7.70 0.00 45.14 5.68
2615 3086 3.176728 TCTACAGCTCTGGAGACCG 57.823 57.895 7.70 0.00 45.14 4.79
2619 3090 3.196469 TGTGGATTTCTACAGCTCTGGAG 59.804 47.826 2.68 2.68 42.93 3.86
2620 3091 3.055819 GTGTGGATTTCTACAGCTCTGGA 60.056 47.826 0.00 0.00 38.02 3.86
2621 3092 3.265791 GTGTGGATTTCTACAGCTCTGG 58.734 50.000 0.00 0.00 38.02 3.86
2622 3093 3.930336 TGTGTGGATTTCTACAGCTCTG 58.070 45.455 0.00 0.00 38.02 3.35
2623 3094 4.833478 ATGTGTGGATTTCTACAGCTCT 57.167 40.909 0.00 0.00 38.02 4.09
2624 3095 5.886960 AAATGTGTGGATTTCTACAGCTC 57.113 39.130 0.00 0.00 38.02 4.09
2625 3096 7.759489 TTAAAATGTGTGGATTTCTACAGCT 57.241 32.000 0.00 0.00 38.02 4.24
2626 3097 8.296713 TCTTTAAAATGTGTGGATTTCTACAGC 58.703 33.333 0.00 0.00 38.02 4.40
2629 3100 9.573133 CCATCTTTAAAATGTGTGGATTTCTAC 57.427 33.333 8.54 0.00 0.00 2.59
2630 3101 8.250332 GCCATCTTTAAAATGTGTGGATTTCTA 58.750 33.333 0.00 0.00 0.00 2.10
2631 3102 7.099120 GCCATCTTTAAAATGTGTGGATTTCT 58.901 34.615 0.00 0.00 0.00 2.52
2632 3103 6.034898 CGCCATCTTTAAAATGTGTGGATTTC 59.965 38.462 0.00 0.00 0.00 2.17
2633 3104 5.868801 CGCCATCTTTAAAATGTGTGGATTT 59.131 36.000 0.00 0.00 0.00 2.17
2634 3105 5.047377 ACGCCATCTTTAAAATGTGTGGATT 60.047 36.000 0.00 0.00 0.00 3.01
2635 3106 4.462483 ACGCCATCTTTAAAATGTGTGGAT 59.538 37.500 0.00 0.00 0.00 3.41
2636 3107 3.823873 ACGCCATCTTTAAAATGTGTGGA 59.176 39.130 0.00 0.00 0.00 4.02
2637 3108 4.165779 GACGCCATCTTTAAAATGTGTGG 58.834 43.478 8.54 0.00 0.00 4.17
2638 3109 4.793071 TGACGCCATCTTTAAAATGTGTG 58.207 39.130 8.54 8.66 0.00 3.82
2639 3110 4.518970 ACTGACGCCATCTTTAAAATGTGT 59.481 37.500 8.54 7.10 0.00 3.72
2640 3111 4.853196 CACTGACGCCATCTTTAAAATGTG 59.147 41.667 8.54 0.00 0.00 3.21
2641 3112 4.759693 TCACTGACGCCATCTTTAAAATGT 59.240 37.500 8.54 0.00 0.00 2.71
2642 3113 5.088739 GTCACTGACGCCATCTTTAAAATG 58.911 41.667 0.00 0.00 0.00 2.32
2643 3114 4.759693 TGTCACTGACGCCATCTTTAAAAT 59.240 37.500 4.71 0.00 34.95 1.82
2644 3115 4.024387 GTGTCACTGACGCCATCTTTAAAA 60.024 41.667 11.12 0.00 37.12 1.52
2645 3116 3.496884 GTGTCACTGACGCCATCTTTAAA 59.503 43.478 11.12 0.00 37.12 1.52
2646 3117 3.064207 GTGTCACTGACGCCATCTTTAA 58.936 45.455 11.12 0.00 37.12 1.52
2647 3118 2.036604 TGTGTCACTGACGCCATCTTTA 59.963 45.455 18.06 0.00 41.72 1.85
2648 3119 1.202639 TGTGTCACTGACGCCATCTTT 60.203 47.619 18.06 0.00 41.72 2.52
2649 3120 0.392706 TGTGTCACTGACGCCATCTT 59.607 50.000 18.06 0.00 41.72 2.40
2650 3121 0.392706 TTGTGTCACTGACGCCATCT 59.607 50.000 18.06 0.00 41.72 2.90
2651 3122 0.512952 GTTGTGTCACTGACGCCATC 59.487 55.000 18.06 7.00 41.72 3.51
2652 3123 0.179059 TGTTGTGTCACTGACGCCAT 60.179 50.000 18.06 0.00 41.72 4.40
2653 3124 0.391793 TTGTTGTGTCACTGACGCCA 60.392 50.000 18.06 6.36 41.72 5.69
2654 3125 0.304705 CTTGTTGTGTCACTGACGCC 59.695 55.000 18.06 6.23 41.72 5.68
2655 3126 0.304705 CCTTGTTGTGTCACTGACGC 59.695 55.000 14.72 14.72 42.60 5.19
2656 3127 1.934589 TCCTTGTTGTGTCACTGACG 58.065 50.000 4.27 0.00 34.95 4.35
2657 3128 3.876914 TCATTCCTTGTTGTGTCACTGAC 59.123 43.478 4.27 1.86 0.00 3.51
2658 3129 3.876914 GTCATTCCTTGTTGTGTCACTGA 59.123 43.478 4.27 0.00 0.00 3.41
2659 3130 3.627123 TGTCATTCCTTGTTGTGTCACTG 59.373 43.478 4.27 0.00 0.00 3.66
2660 3131 3.884895 TGTCATTCCTTGTTGTGTCACT 58.115 40.909 4.27 0.00 0.00 3.41
2661 3132 4.539870 CATGTCATTCCTTGTTGTGTCAC 58.460 43.478 0.00 0.00 0.00 3.67
2662 3133 3.004629 GCATGTCATTCCTTGTTGTGTCA 59.995 43.478 0.00 0.00 0.00 3.58
2663 3134 3.254166 AGCATGTCATTCCTTGTTGTGTC 59.746 43.478 0.00 0.00 0.00 3.67
2664 3135 3.225104 AGCATGTCATTCCTTGTTGTGT 58.775 40.909 0.00 0.00 0.00 3.72
2665 3136 3.928727 AGCATGTCATTCCTTGTTGTG 57.071 42.857 0.00 0.00 0.00 3.33
2666 3137 3.890756 TCAAGCATGTCATTCCTTGTTGT 59.109 39.130 16.73 0.00 36.82 3.32
2667 3138 4.508461 TCAAGCATGTCATTCCTTGTTG 57.492 40.909 16.73 1.25 36.82 3.33
2668 3139 4.768448 TGATCAAGCATGTCATTCCTTGTT 59.232 37.500 16.73 11.69 36.82 2.83
2669 3140 4.157289 GTGATCAAGCATGTCATTCCTTGT 59.843 41.667 16.73 8.88 36.82 3.16
2670 3141 4.398358 AGTGATCAAGCATGTCATTCCTTG 59.602 41.667 13.32 13.32 36.81 3.61
2671 3142 4.597004 AGTGATCAAGCATGTCATTCCTT 58.403 39.130 0.00 0.00 0.00 3.36
2672 3143 4.232188 AGTGATCAAGCATGTCATTCCT 57.768 40.909 0.00 0.00 0.00 3.36
2673 3144 6.630444 ATTAGTGATCAAGCATGTCATTCC 57.370 37.500 0.00 0.00 0.00 3.01
2676 3147 9.346005 TGATAAATTAGTGATCAAGCATGTCAT 57.654 29.630 0.00 0.00 0.00 3.06
2677 3148 8.615211 GTGATAAATTAGTGATCAAGCATGTCA 58.385 33.333 0.00 0.00 31.62 3.58
2678 3149 7.795734 CGTGATAAATTAGTGATCAAGCATGTC 59.204 37.037 0.00 0.00 31.62 3.06
2679 3150 7.495606 TCGTGATAAATTAGTGATCAAGCATGT 59.504 33.333 0.00 0.00 31.62 3.21
2680 3151 7.795734 GTCGTGATAAATTAGTGATCAAGCATG 59.204 37.037 0.00 0.00 31.62 4.06
2681 3152 7.495606 TGTCGTGATAAATTAGTGATCAAGCAT 59.504 33.333 0.00 0.00 31.62 3.79
2682 3153 6.816140 TGTCGTGATAAATTAGTGATCAAGCA 59.184 34.615 0.00 0.00 31.62 3.91
2683 3154 7.010552 ACTGTCGTGATAAATTAGTGATCAAGC 59.989 37.037 0.00 0.00 31.62 4.01
2684 3155 8.412608 ACTGTCGTGATAAATTAGTGATCAAG 57.587 34.615 0.00 0.00 31.62 3.02
2685 3156 8.771920 AACTGTCGTGATAAATTAGTGATCAA 57.228 30.769 0.00 0.00 31.62 2.57
2686 3157 7.491372 GGAACTGTCGTGATAAATTAGTGATCA 59.509 37.037 0.00 0.00 0.00 2.92
2687 3158 7.491372 TGGAACTGTCGTGATAAATTAGTGATC 59.509 37.037 0.00 0.00 0.00 2.92
2688 3159 7.327975 TGGAACTGTCGTGATAAATTAGTGAT 58.672 34.615 0.00 0.00 0.00 3.06
2689 3160 6.693466 TGGAACTGTCGTGATAAATTAGTGA 58.307 36.000 0.00 0.00 0.00 3.41
2690 3161 6.811665 TCTGGAACTGTCGTGATAAATTAGTG 59.188 38.462 0.00 0.00 0.00 2.74
2691 3162 6.931838 TCTGGAACTGTCGTGATAAATTAGT 58.068 36.000 0.00 0.00 0.00 2.24
2692 3163 6.477033 CCTCTGGAACTGTCGTGATAAATTAG 59.523 42.308 0.00 0.00 0.00 1.73
2693 3164 6.338146 CCTCTGGAACTGTCGTGATAAATTA 58.662 40.000 0.00 0.00 0.00 1.40
2694 3165 5.178797 CCTCTGGAACTGTCGTGATAAATT 58.821 41.667 0.00 0.00 0.00 1.82
2695 3166 4.383118 CCCTCTGGAACTGTCGTGATAAAT 60.383 45.833 0.00 0.00 0.00 1.40
2696 3167 3.056107 CCCTCTGGAACTGTCGTGATAAA 60.056 47.826 0.00 0.00 0.00 1.40
2697 3168 2.496070 CCCTCTGGAACTGTCGTGATAA 59.504 50.000 0.00 0.00 0.00 1.75
2698 3169 2.100197 CCCTCTGGAACTGTCGTGATA 58.900 52.381 0.00 0.00 0.00 2.15
2699 3170 0.898320 CCCTCTGGAACTGTCGTGAT 59.102 55.000 0.00 0.00 0.00 3.06
2700 3171 0.469331 ACCCTCTGGAACTGTCGTGA 60.469 55.000 0.00 0.00 34.81 4.35
2701 3172 0.038159 GACCCTCTGGAACTGTCGTG 60.038 60.000 0.00 0.00 34.81 4.35
2702 3173 1.186267 GGACCCTCTGGAACTGTCGT 61.186 60.000 0.00 0.00 34.81 4.34
2703 3174 1.185618 TGGACCCTCTGGAACTGTCG 61.186 60.000 0.00 0.00 34.81 4.35
2704 3175 2.759985 TGGACCCTCTGGAACTGTC 58.240 57.895 0.00 0.00 34.81 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.