Multiple sequence alignment - TraesCS1D01G339500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G339500 chr1D 100.000 2646 0 0 1 2646 429505855 429508500 0.000000e+00 4887.0
1 TraesCS1D01G339500 chr1D 85.979 378 43 5 518 891 429514235 429514606 1.910000e-106 396.0
2 TraesCS1D01G339500 chr1A 91.682 1647 114 12 1 1631 526922773 526924412 0.000000e+00 2261.0
3 TraesCS1D01G339500 chr1A 82.528 538 72 16 913 1436 526925979 526926508 1.120000e-123 453.0
4 TraesCS1D01G339500 chr1A 89.520 229 23 1 1631 1859 526925137 526925364 3.330000e-74 289.0
5 TraesCS1D01G339500 chr1B 95.128 1252 38 7 338 1574 580542800 580544043 0.000000e+00 1953.0
6 TraesCS1D01G339500 chr1B 96.839 348 9 2 1572 1919 580544166 580544511 4.910000e-162 580.0
7 TraesCS1D01G339500 chr1B 84.856 383 45 6 481 856 580544668 580545044 8.940000e-100 374.0
8 TraesCS1D01G339500 chr1B 91.860 258 13 2 1 257 580542552 580542802 1.170000e-93 353.0
9 TraesCS1D01G339500 chr1B 94.444 54 3 0 2529 2582 580544646 580544593 1.690000e-12 84.2
10 TraesCS1D01G339500 chr1B 100.000 30 0 0 1856 1885 633383428 633383399 3.680000e-04 56.5
11 TraesCS1D01G339500 chrUn 92.090 354 20 2 1974 2319 376394175 376393822 2.370000e-135 492.0
12 TraesCS1D01G339500 chr6A 92.090 354 20 5 1974 2319 615390453 615390806 2.370000e-135 492.0
13 TraesCS1D01G339500 chr3A 91.501 353 23 4 1974 2319 57265758 57265406 1.840000e-131 479.0
14 TraesCS1D01G339500 chr5A 91.243 354 23 5 1974 2319 4036586 4036233 2.380000e-130 475.0
15 TraesCS1D01G339500 chr4D 90.986 355 23 6 1974 2319 473818391 473818745 1.110000e-128 470.0
16 TraesCS1D01G339500 chr4D 87.500 352 36 5 1975 2319 88909649 88909999 1.480000e-107 399.0
17 TraesCS1D01G339500 chr4D 86.081 273 26 6 2313 2582 93140934 93140671 1.550000e-72 283.0
18 TraesCS1D01G339500 chr5D 91.958 286 16 3 2043 2321 301626993 301627278 6.860000e-106 394.0
19 TraesCS1D01G339500 chr5D 87.251 251 20 8 2313 2561 362198840 362198600 2.590000e-70 276.0
20 TraesCS1D01G339500 chr2A 88.923 325 29 4 1991 2309 80621289 80620966 6.860000e-106 394.0
21 TraesCS1D01G339500 chr4B 84.136 353 49 6 1974 2319 125701712 125702064 4.220000e-88 335.0
22 TraesCS1D01G339500 chr5B 88.645 273 18 9 2313 2582 61623434 61623172 1.180000e-83 320.0
23 TraesCS1D01G339500 chr5B 100.000 29 0 0 1857 1885 618315789 618315817 1.000000e-03 54.7
24 TraesCS1D01G339500 chr5B 100.000 29 0 0 1857 1885 676587169 676587141 1.000000e-03 54.7
25 TraesCS1D01G339500 chr7D 86.806 288 29 7 1976 2257 546125079 546124795 1.980000e-81 313.0
26 TraesCS1D01G339500 chr4A 84.375 256 32 6 2320 2572 688987769 688988019 7.320000e-61 244.0
27 TraesCS1D01G339500 chr4A 100.000 29 0 0 1857 1885 295728240 295728268 1.000000e-03 54.7
28 TraesCS1D01G339500 chr3B 100.000 29 0 0 1857 1885 551043040 551043068 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G339500 chr1D 429505855 429508500 2645 False 4887 4887 100.00000 1 2646 1 chr1D.!!$F1 2645
1 TraesCS1D01G339500 chr1A 526922773 526926508 3735 False 1001 2261 87.91000 1 1859 3 chr1A.!!$F1 1858
2 TraesCS1D01G339500 chr1B 580542552 580545044 2492 False 815 1953 92.17075 1 1919 4 chr1B.!!$F1 1918


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
305 308 0.6112 TCGGGGACATCACGTGAAAT 59.389 50.0 24.13 13.7 0.0 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 3232 0.025001 CGAGCGTGCCGACAATAAAG 59.975 55.0 0.0 0.0 0.0 1.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.465055 GAACCAGGCCGCTAGTTGGT 62.465 60.000 6.28 6.28 45.47 3.67
155 157 7.065443 CAGAACAATGATTCAGTTGATCTGCTA 59.935 37.037 21.44 0.00 43.42 3.49
159 161 5.016051 TGATTCAGTTGATCTGCTAGGAC 57.984 43.478 0.00 0.00 43.32 3.85
188 190 2.156098 GGAACGAAACAAGGCCACATA 58.844 47.619 5.01 0.00 0.00 2.29
204 206 4.452455 GCCACATACAGGAATAAATCTCCG 59.548 45.833 0.00 0.00 38.08 4.63
235 238 5.067413 AGCAAGATCATTGAGCAATTCGAAT 59.933 36.000 4.39 4.39 0.00 3.34
305 308 0.611200 TCGGGGACATCACGTGAAAT 59.389 50.000 24.13 13.70 0.00 2.17
320 323 2.030457 GTGAAATTGTATCCGAGGCACG 59.970 50.000 0.00 0.00 42.18 5.34
323 326 2.795175 ATTGTATCCGAGGCACGTAG 57.205 50.000 3.22 0.00 40.78 3.51
325 328 1.105167 TGTATCCGAGGCACGTAGGG 61.105 60.000 3.22 0.00 40.78 3.53
330 333 4.208686 GAGGCACGTAGGGAGGCG 62.209 72.222 0.00 0.00 0.00 5.52
331 334 4.753662 AGGCACGTAGGGAGGCGA 62.754 66.667 0.00 0.00 0.00 5.54
335 338 4.835891 ACGTAGGGAGGCGAGGGG 62.836 72.222 0.00 0.00 0.00 4.79
400 404 4.307032 ACTTGATCTACCCATGTTTGCT 57.693 40.909 0.00 0.00 0.00 3.91
406 410 1.895131 CTACCCATGTTTGCTGCCTTT 59.105 47.619 0.00 0.00 0.00 3.11
544 552 3.255725 TCTTTAATTGCACGTACCTCCG 58.744 45.455 0.00 0.00 0.00 4.63
1174 1196 0.537188 CTAGTTCCGCCACCATCTGT 59.463 55.000 0.00 0.00 0.00 3.41
1243 1265 2.511600 CGACCTCCGATTGGGCAC 60.512 66.667 0.00 0.00 41.76 5.01
1327 1349 1.677576 CTGTTTGTGCTCTGCCTTCAA 59.322 47.619 0.00 0.00 0.00 2.69
1465 1487 1.153086 GGCCTCATCGGTGATGCTT 60.153 57.895 22.64 0.00 43.13 3.91
1761 2633 6.139169 CGAAATTTGTCTCACAACTTCTTTCG 59.861 38.462 0.00 14.29 37.90 3.46
1854 2726 8.752187 ACAAGCACCAATGTTCAAATATAAGAT 58.248 29.630 0.00 0.00 0.00 2.40
1918 2790 2.611225 CCAGACCAAGGCAGAGTATC 57.389 55.000 0.00 0.00 0.00 2.24
1920 2792 1.115467 AGACCAAGGCAGAGTATCGG 58.885 55.000 0.00 0.00 42.67 4.18
1923 2795 0.824109 CCAAGGCAGAGTATCGGTCA 59.176 55.000 0.00 0.00 37.38 4.02
1926 2798 0.955178 AGGCAGAGTATCGGTCATCG 59.045 55.000 0.00 0.00 37.38 3.84
1928 2800 0.030773 GCAGAGTATCGGTCATCGCA 59.969 55.000 0.00 0.00 42.67 5.10
1929 2801 1.536072 GCAGAGTATCGGTCATCGCAA 60.536 52.381 0.00 0.00 42.67 4.85
1930 2802 2.864097 GCAGAGTATCGGTCATCGCAAT 60.864 50.000 0.00 0.00 42.67 3.56
1934 2806 3.650139 AGTATCGGTCATCGCAATAACC 58.350 45.455 0.00 0.00 39.05 2.85
1937 2809 2.912771 TCGGTCATCGCAATAACCAAT 58.087 42.857 0.00 0.00 39.05 3.16
1938 2810 2.869801 TCGGTCATCGCAATAACCAATC 59.130 45.455 0.00 0.00 39.05 2.67
1939 2811 2.611751 CGGTCATCGCAATAACCAATCA 59.388 45.455 0.00 0.00 0.00 2.57
1940 2812 3.303329 CGGTCATCGCAATAACCAATCAG 60.303 47.826 0.00 0.00 0.00 2.90
1942 2814 2.287644 TCATCGCAATAACCAATCAGCG 59.712 45.455 0.00 0.00 41.04 5.18
1945 2817 2.095213 TCGCAATAACCAATCAGCGTTC 59.905 45.455 0.00 0.00 40.72 3.95
1947 2819 3.487376 CGCAATAACCAATCAGCGTTCAT 60.487 43.478 0.00 0.00 37.29 2.57
1948 2820 4.037690 GCAATAACCAATCAGCGTTCATC 58.962 43.478 0.00 0.00 0.00 2.92
1950 2822 4.882671 ATAACCAATCAGCGTTCATCAC 57.117 40.909 0.00 0.00 0.00 3.06
1957 2829 3.953712 TCAGCGTTCATCACTTAAGGA 57.046 42.857 7.53 1.82 0.00 3.36
1958 2830 4.265904 TCAGCGTTCATCACTTAAGGAA 57.734 40.909 7.53 0.00 0.00 3.36
1959 2831 4.637276 TCAGCGTTCATCACTTAAGGAAA 58.363 39.130 7.53 0.00 0.00 3.13
1960 2832 4.690748 TCAGCGTTCATCACTTAAGGAAAG 59.309 41.667 7.53 4.40 41.33 2.62
1963 2835 4.929808 GCGTTCATCACTTAAGGAAAGAGA 59.070 41.667 7.53 0.00 38.85 3.10
1964 2836 5.062809 GCGTTCATCACTTAAGGAAAGAGAG 59.937 44.000 7.53 4.33 38.07 3.20
1967 2839 5.482908 TCATCACTTAAGGAAAGAGAGCAC 58.517 41.667 7.53 0.00 38.07 4.40
1969 2841 3.646162 TCACTTAAGGAAAGAGAGCACCA 59.354 43.478 7.53 0.00 38.67 4.17
1973 2967 3.515602 AAGGAAAGAGAGCACCACATT 57.484 42.857 0.00 0.00 0.00 2.71
1976 2970 2.746362 GGAAAGAGAGCACCACATTGAG 59.254 50.000 0.00 0.00 0.00 3.02
1978 2972 3.331478 AAGAGAGCACCACATTGAGAG 57.669 47.619 0.00 0.00 0.00 3.20
1980 2974 3.106054 AGAGAGCACCACATTGAGAGAT 58.894 45.455 0.00 0.00 0.00 2.75
1981 2975 3.118702 AGAGAGCACCACATTGAGAGATG 60.119 47.826 0.00 0.00 0.00 2.90
1982 2976 2.093075 AGAGCACCACATTGAGAGATGG 60.093 50.000 0.00 0.00 38.26 3.51
1984 2978 1.386533 CACCACATTGAGAGATGGCC 58.613 55.000 0.00 0.00 35.49 5.36
1985 2979 1.064906 CACCACATTGAGAGATGGCCT 60.065 52.381 3.32 0.00 35.49 5.19
1986 2980 1.064906 ACCACATTGAGAGATGGCCTG 60.065 52.381 3.32 0.00 35.49 4.85
1990 2984 0.851469 ATTGAGAGATGGCCTGGCAT 59.149 50.000 22.05 10.54 0.00 4.40
2006 3000 2.358939 GCATTTGCCAACTCTCTTGG 57.641 50.000 0.00 0.00 42.37 3.61
2007 3001 1.615392 GCATTTGCCAACTCTCTTGGT 59.385 47.619 1.22 0.00 41.53 3.67
2008 3002 2.036346 GCATTTGCCAACTCTCTTGGTT 59.964 45.455 1.22 0.00 41.53 3.67
2009 3003 3.493176 GCATTTGCCAACTCTCTTGGTTT 60.493 43.478 1.22 0.00 41.53 3.27
2010 3004 4.301628 CATTTGCCAACTCTCTTGGTTTC 58.698 43.478 1.22 0.00 41.53 2.78
2011 3005 2.727123 TGCCAACTCTCTTGGTTTCA 57.273 45.000 1.22 0.00 41.53 2.69
2014 3008 3.569701 TGCCAACTCTCTTGGTTTCAATC 59.430 43.478 1.22 0.00 41.53 2.67
2015 3009 3.569701 GCCAACTCTCTTGGTTTCAATCA 59.430 43.478 1.22 0.00 41.53 2.57
2017 3011 5.065914 CCAACTCTCTTGGTTTCAATCAGA 58.934 41.667 0.00 0.00 34.92 3.27
2018 3012 5.709164 CCAACTCTCTTGGTTTCAATCAGAT 59.291 40.000 0.00 0.00 34.92 2.90
2020 3014 6.814506 ACTCTCTTGGTTTCAATCAGATTG 57.185 37.500 16.12 16.12 41.57 2.67
2021 3015 6.537355 ACTCTCTTGGTTTCAATCAGATTGA 58.463 36.000 20.18 20.18 46.77 2.57
2031 3025 4.516323 TCAATCAGATTGAAGCGGAATCA 58.484 39.130 21.52 0.00 45.57 2.57
2032 3026 4.573607 TCAATCAGATTGAAGCGGAATCAG 59.426 41.667 21.52 0.00 45.57 2.90
2034 3028 4.412796 TCAGATTGAAGCGGAATCAGAT 57.587 40.909 7.76 0.00 33.03 2.90
2037 3031 6.348498 TCAGATTGAAGCGGAATCAGATTTA 58.652 36.000 0.00 0.00 33.03 1.40
2039 3033 6.259608 CAGATTGAAGCGGAATCAGATTTACT 59.740 38.462 0.00 0.00 33.03 2.24
2040 3034 6.825721 AGATTGAAGCGGAATCAGATTTACTT 59.174 34.615 0.00 1.96 33.03 2.24
2041 3035 6.817765 TTGAAGCGGAATCAGATTTACTTT 57.182 33.333 0.00 0.00 0.00 2.66
2042 3036 7.915293 TTGAAGCGGAATCAGATTTACTTTA 57.085 32.000 0.00 0.00 0.00 1.85
2044 3038 7.974675 TGAAGCGGAATCAGATTTACTTTAAG 58.025 34.615 0.00 0.00 0.00 1.85
2045 3039 7.606456 TGAAGCGGAATCAGATTTACTTTAAGT 59.394 33.333 2.32 2.32 0.00 2.24
2046 3040 9.095065 GAAGCGGAATCAGATTTACTTTAAGTA 57.905 33.333 0.03 0.03 0.00 2.24
2047 3041 9.444600 AAGCGGAATCAGATTTACTTTAAGTAA 57.555 29.630 12.92 12.92 38.79 2.24
2048 3042 9.614792 AGCGGAATCAGATTTACTTTAAGTAAT 57.385 29.630 16.93 8.46 40.08 1.89
2078 3072 4.578871 TGTTCTGGTCATACAAGATGGTG 58.421 43.478 0.00 0.00 0.00 4.17
2079 3073 3.912496 TCTGGTCATACAAGATGGTGG 57.088 47.619 0.00 0.00 0.00 4.61
2080 3074 2.505407 TCTGGTCATACAAGATGGTGGG 59.495 50.000 0.00 0.00 0.00 4.61
2081 3075 2.505407 CTGGTCATACAAGATGGTGGGA 59.495 50.000 0.00 0.00 0.00 4.37
2082 3076 3.122480 TGGTCATACAAGATGGTGGGAT 58.878 45.455 0.00 0.00 0.00 3.85
2083 3077 3.117926 TGGTCATACAAGATGGTGGGATG 60.118 47.826 0.00 0.00 0.00 3.51
2084 3078 3.136443 GGTCATACAAGATGGTGGGATGA 59.864 47.826 0.00 0.00 0.00 2.92
2085 3079 4.385199 GGTCATACAAGATGGTGGGATGAA 60.385 45.833 0.00 0.00 30.98 2.57
2086 3080 4.818546 GTCATACAAGATGGTGGGATGAAG 59.181 45.833 0.00 0.00 30.98 3.02
2087 3081 2.134789 ACAAGATGGTGGGATGAAGC 57.865 50.000 0.00 0.00 0.00 3.86
2088 3082 1.637553 ACAAGATGGTGGGATGAAGCT 59.362 47.619 0.00 0.00 0.00 3.74
2089 3083 2.022195 CAAGATGGTGGGATGAAGCTG 58.978 52.381 0.00 0.00 0.00 4.24
2092 3086 0.395311 ATGGTGGGATGAAGCTGCAG 60.395 55.000 10.11 10.11 0.00 4.41
2093 3087 2.413142 GGTGGGATGAAGCTGCAGC 61.413 63.158 31.53 31.53 42.49 5.25
2094 3088 1.676635 GTGGGATGAAGCTGCAGCA 60.677 57.895 38.24 20.45 45.16 4.41
2095 3089 1.676635 TGGGATGAAGCTGCAGCAC 60.677 57.895 38.24 29.69 45.16 4.40
2096 3090 1.378250 GGGATGAAGCTGCAGCACT 60.378 57.895 38.24 25.71 45.16 4.40
2097 3091 0.107508 GGGATGAAGCTGCAGCACTA 60.108 55.000 38.24 23.85 45.16 2.74
2100 3094 2.686915 GGATGAAGCTGCAGCACTATTT 59.313 45.455 38.24 24.20 45.16 1.40
2101 3095 3.488721 GGATGAAGCTGCAGCACTATTTG 60.489 47.826 38.24 0.00 45.16 2.32
2116 3110 4.216042 CACTATTTGCAGAATGTGTGGACA 59.784 41.667 14.23 0.00 39.31 4.02
2118 3112 6.093909 CACTATTTGCAGAATGTGTGGACATA 59.906 38.462 14.23 0.00 42.30 2.29
2119 3113 5.571784 ATTTGCAGAATGTGTGGACATAG 57.428 39.130 0.00 0.00 42.30 2.23
2120 3114 2.989909 TGCAGAATGTGTGGACATAGG 58.010 47.619 0.00 0.00 42.30 2.57
2121 3115 2.305635 TGCAGAATGTGTGGACATAGGT 59.694 45.455 0.00 0.00 42.30 3.08
2122 3116 3.517500 TGCAGAATGTGTGGACATAGGTA 59.482 43.478 0.00 0.00 42.30 3.08
2123 3117 3.871594 GCAGAATGTGTGGACATAGGTAC 59.128 47.826 0.00 0.00 42.30 3.34
2124 3118 4.383118 GCAGAATGTGTGGACATAGGTACT 60.383 45.833 0.00 0.00 42.30 2.73
2125 3119 5.111989 CAGAATGTGTGGACATAGGTACTG 58.888 45.833 0.00 0.00 42.30 2.74
2126 3120 3.543680 ATGTGTGGACATAGGTACTGC 57.456 47.619 0.00 0.00 41.27 4.40
2127 3121 2.252714 TGTGTGGACATAGGTACTGCA 58.747 47.619 0.00 0.00 41.52 4.41
2128 3122 2.635427 TGTGTGGACATAGGTACTGCAA 59.365 45.455 0.00 0.00 41.52 4.08
2129 3123 3.263170 TGTGTGGACATAGGTACTGCAAT 59.737 43.478 0.00 0.00 41.52 3.56
2131 3125 4.094887 GTGTGGACATAGGTACTGCAATTG 59.905 45.833 0.00 0.00 41.52 2.32
2133 3127 3.214328 GGACATAGGTACTGCAATTGGG 58.786 50.000 7.72 0.00 41.52 4.12
2134 3128 3.214328 GACATAGGTACTGCAATTGGGG 58.786 50.000 7.72 0.00 41.52 4.96
2137 3131 0.625849 AGGTACTGCAATTGGGGAGG 59.374 55.000 7.72 0.00 37.18 4.30
2138 3132 0.331616 GGTACTGCAATTGGGGAGGT 59.668 55.000 7.72 0.00 0.00 3.85
2139 3133 1.682087 GGTACTGCAATTGGGGAGGTC 60.682 57.143 7.72 0.00 0.00 3.85
2140 3134 1.004277 GTACTGCAATTGGGGAGGTCA 59.996 52.381 7.72 0.00 0.00 4.02
2142 3136 1.077663 ACTGCAATTGGGGAGGTCATT 59.922 47.619 7.72 0.00 0.00 2.57
2143 3137 2.181975 CTGCAATTGGGGAGGTCATTT 58.818 47.619 7.72 0.00 0.00 2.32
2146 3140 4.163427 TGCAATTGGGGAGGTCATTTTTA 58.837 39.130 7.72 0.00 0.00 1.52
2147 3141 4.594920 TGCAATTGGGGAGGTCATTTTTAA 59.405 37.500 7.72 0.00 0.00 1.52
2148 3142 5.178061 GCAATTGGGGAGGTCATTTTTAAG 58.822 41.667 7.72 0.00 0.00 1.85
2150 3144 3.534357 TGGGGAGGTCATTTTTAAGCA 57.466 42.857 0.00 0.00 0.00 3.91
2153 3147 4.222588 TGGGGAGGTCATTTTTAAGCATTG 59.777 41.667 0.00 0.00 0.00 2.82
2154 3148 4.222810 GGGGAGGTCATTTTTAAGCATTGT 59.777 41.667 0.00 0.00 0.00 2.71
2156 3150 6.098266 GGGGAGGTCATTTTTAAGCATTGTAT 59.902 38.462 0.00 0.00 0.00 2.29
2157 3151 7.364673 GGGGAGGTCATTTTTAAGCATTGTATT 60.365 37.037 0.00 0.00 0.00 1.89
2159 3153 7.432252 GGAGGTCATTTTTAAGCATTGTATTCG 59.568 37.037 0.00 0.00 0.00 3.34
2160 3154 7.826690 AGGTCATTTTTAAGCATTGTATTCGT 58.173 30.769 0.00 0.00 0.00 3.85
2161 3155 8.303876 AGGTCATTTTTAAGCATTGTATTCGTT 58.696 29.630 0.00 0.00 0.00 3.85
2162 3156 8.583765 GGTCATTTTTAAGCATTGTATTCGTTC 58.416 33.333 0.00 0.00 0.00 3.95
2163 3157 9.123709 GTCATTTTTAAGCATTGTATTCGTTCA 57.876 29.630 0.00 0.00 0.00 3.18
2164 3158 9.853555 TCATTTTTAAGCATTGTATTCGTTCAT 57.146 25.926 0.00 0.00 0.00 2.57
2165 3159 9.890085 CATTTTTAAGCATTGTATTCGTTCATG 57.110 29.630 0.00 0.00 0.00 3.07
2166 3160 9.638239 ATTTTTAAGCATTGTATTCGTTCATGT 57.362 25.926 0.00 0.00 0.00 3.21
2170 3164 9.929722 TTAAGCATTGTATTCGTTCATGTAATC 57.070 29.630 0.00 0.00 0.00 1.75
2171 3165 7.552458 AGCATTGTATTCGTTCATGTAATCA 57.448 32.000 0.00 0.00 0.00 2.57
2172 3166 7.984391 AGCATTGTATTCGTTCATGTAATCAA 58.016 30.769 0.00 0.00 0.00 2.57
2173 3167 8.124823 AGCATTGTATTCGTTCATGTAATCAAG 58.875 33.333 0.00 0.00 0.00 3.02
2174 3168 7.096885 GCATTGTATTCGTTCATGTAATCAAGC 60.097 37.037 0.00 0.00 0.00 4.01
2175 3169 6.031549 TGTATTCGTTCATGTAATCAAGCG 57.968 37.500 0.00 0.00 0.00 4.68
2176 3170 5.808030 TGTATTCGTTCATGTAATCAAGCGA 59.192 36.000 0.00 0.00 0.00 4.93
2177 3171 4.577687 TTCGTTCATGTAATCAAGCGAC 57.422 40.909 0.00 0.00 0.00 5.19
2178 3172 3.845178 TCGTTCATGTAATCAAGCGACT 58.155 40.909 0.00 0.00 0.00 4.18
2179 3173 3.857665 TCGTTCATGTAATCAAGCGACTC 59.142 43.478 0.00 0.00 0.00 3.36
2180 3174 3.612423 CGTTCATGTAATCAAGCGACTCA 59.388 43.478 0.00 0.00 0.00 3.41
2181 3175 4.268644 CGTTCATGTAATCAAGCGACTCAT 59.731 41.667 0.00 0.00 0.00 2.90
2182 3176 5.496387 GTTCATGTAATCAAGCGACTCATG 58.504 41.667 0.00 0.00 32.69 3.07
2183 3177 4.758688 TCATGTAATCAAGCGACTCATGT 58.241 39.130 0.00 0.00 32.96 3.21
2184 3178 4.567959 TCATGTAATCAAGCGACTCATGTG 59.432 41.667 0.00 0.00 32.96 3.21
2185 3179 2.672874 TGTAATCAAGCGACTCATGTGC 59.327 45.455 0.00 0.00 0.00 4.57
2186 3180 2.105006 AATCAAGCGACTCATGTGCT 57.895 45.000 0.00 0.00 41.60 4.40
2187 3181 2.967599 ATCAAGCGACTCATGTGCTA 57.032 45.000 0.00 0.00 38.17 3.49
2188 3182 2.284263 TCAAGCGACTCATGTGCTAG 57.716 50.000 0.00 0.00 38.17 3.42
2189 3183 0.649475 CAAGCGACTCATGTGCTAGC 59.351 55.000 8.10 8.10 38.17 3.42
2190 3184 0.534412 AAGCGACTCATGTGCTAGCT 59.466 50.000 17.23 0.00 38.17 3.32
2191 3185 1.393603 AGCGACTCATGTGCTAGCTA 58.606 50.000 17.23 5.45 37.15 3.32
2192 3186 1.751351 AGCGACTCATGTGCTAGCTAA 59.249 47.619 17.23 4.18 37.15 3.09
2193 3187 1.855360 GCGACTCATGTGCTAGCTAAC 59.145 52.381 17.23 7.29 0.00 2.34
2194 3188 2.480416 GCGACTCATGTGCTAGCTAACT 60.480 50.000 17.23 0.00 0.00 2.24
2195 3189 3.243101 GCGACTCATGTGCTAGCTAACTA 60.243 47.826 17.23 0.00 0.00 2.24
2196 3190 4.557695 GCGACTCATGTGCTAGCTAACTAT 60.558 45.833 17.23 0.37 0.00 2.12
2197 3191 4.914504 CGACTCATGTGCTAGCTAACTATG 59.085 45.833 17.23 12.35 0.00 2.23
2198 3192 5.207110 ACTCATGTGCTAGCTAACTATGG 57.793 43.478 17.23 9.22 0.00 2.74
2199 3193 4.651503 ACTCATGTGCTAGCTAACTATGGT 59.348 41.667 17.23 9.72 0.00 3.55
2200 3194 5.129485 ACTCATGTGCTAGCTAACTATGGTT 59.871 40.000 17.23 0.00 39.26 3.67
2201 3195 5.989477 TCATGTGCTAGCTAACTATGGTTT 58.011 37.500 17.23 0.00 36.92 3.27
2202 3196 6.414732 TCATGTGCTAGCTAACTATGGTTTT 58.585 36.000 17.23 0.00 36.92 2.43
2203 3197 6.884295 TCATGTGCTAGCTAACTATGGTTTTT 59.116 34.615 17.23 0.00 36.92 1.94
2204 3198 6.494893 TGTGCTAGCTAACTATGGTTTTTG 57.505 37.500 17.23 0.00 36.92 2.44
2205 3199 6.001460 TGTGCTAGCTAACTATGGTTTTTGT 58.999 36.000 17.23 0.00 36.92 2.83
2206 3200 6.148811 TGTGCTAGCTAACTATGGTTTTTGTC 59.851 38.462 17.23 0.00 36.92 3.18
2207 3201 6.148811 GTGCTAGCTAACTATGGTTTTTGTCA 59.851 38.462 17.23 0.00 36.92 3.58
2208 3202 6.148811 TGCTAGCTAACTATGGTTTTTGTCAC 59.851 38.462 17.23 0.00 36.92 3.67
2209 3203 6.148811 GCTAGCTAACTATGGTTTTTGTCACA 59.851 38.462 7.70 0.00 36.92 3.58
2210 3204 6.952773 AGCTAACTATGGTTTTTGTCACAA 57.047 33.333 0.00 0.00 36.92 3.33
2211 3205 6.970484 AGCTAACTATGGTTTTTGTCACAAG 58.030 36.000 0.00 0.00 36.92 3.16
2212 3206 6.546034 AGCTAACTATGGTTTTTGTCACAAGT 59.454 34.615 0.00 0.00 36.92 3.16
2213 3207 6.856426 GCTAACTATGGTTTTTGTCACAAGTC 59.144 38.462 0.00 0.00 36.92 3.01
2214 3208 7.255139 GCTAACTATGGTTTTTGTCACAAGTCT 60.255 37.037 0.00 0.00 36.92 3.24
2215 3209 9.268268 CTAACTATGGTTTTTGTCACAAGTCTA 57.732 33.333 0.00 0.00 36.92 2.59
2216 3210 7.492352 ACTATGGTTTTTGTCACAAGTCTAC 57.508 36.000 0.00 0.00 0.00 2.59
2217 3211 7.280356 ACTATGGTTTTTGTCACAAGTCTACT 58.720 34.615 0.00 0.00 0.00 2.57
2218 3212 7.773690 ACTATGGTTTTTGTCACAAGTCTACTT 59.226 33.333 0.00 0.00 36.45 2.24
2231 3225 4.414337 AGTCTACTTGATTGGATGAGCC 57.586 45.455 0.00 0.00 37.10 4.70
2232 3226 4.036518 AGTCTACTTGATTGGATGAGCCT 58.963 43.478 0.00 0.00 37.63 4.58
2233 3227 4.100808 AGTCTACTTGATTGGATGAGCCTC 59.899 45.833 0.00 0.00 37.63 4.70
2234 3228 2.725221 ACTTGATTGGATGAGCCTCC 57.275 50.000 0.00 0.00 37.63 4.30
2235 3229 2.203584 ACTTGATTGGATGAGCCTCCT 58.796 47.619 0.00 0.00 36.20 3.69
2236 3230 2.092538 ACTTGATTGGATGAGCCTCCTG 60.093 50.000 0.00 0.00 36.20 3.86
2237 3231 1.883678 TGATTGGATGAGCCTCCTGA 58.116 50.000 0.00 0.00 36.20 3.86
2238 3232 1.487976 TGATTGGATGAGCCTCCTGAC 59.512 52.381 0.00 0.00 36.20 3.51
2239 3233 1.767681 GATTGGATGAGCCTCCTGACT 59.232 52.381 0.00 0.00 36.20 3.41
2240 3234 1.661463 TTGGATGAGCCTCCTGACTT 58.339 50.000 0.00 0.00 36.20 3.01
2241 3235 1.661463 TGGATGAGCCTCCTGACTTT 58.339 50.000 0.00 0.00 36.20 2.66
2242 3236 2.832838 TGGATGAGCCTCCTGACTTTA 58.167 47.619 0.00 0.00 36.20 1.85
2243 3237 3.387962 TGGATGAGCCTCCTGACTTTAT 58.612 45.455 0.00 0.00 36.20 1.40
2244 3238 3.782523 TGGATGAGCCTCCTGACTTTATT 59.217 43.478 0.00 0.00 36.20 1.40
2245 3239 4.133078 GGATGAGCCTCCTGACTTTATTG 58.867 47.826 0.00 0.00 32.18 1.90
2246 3240 4.384647 GGATGAGCCTCCTGACTTTATTGT 60.385 45.833 0.00 0.00 32.18 2.71
2247 3241 4.207891 TGAGCCTCCTGACTTTATTGTC 57.792 45.455 0.00 0.00 37.47 3.18
2248 3242 3.190874 GAGCCTCCTGACTTTATTGTCG 58.809 50.000 0.00 0.00 39.64 4.35
2249 3243 2.093447 AGCCTCCTGACTTTATTGTCGG 60.093 50.000 0.00 0.00 41.60 4.79
2250 3244 2.280628 CCTCCTGACTTTATTGTCGGC 58.719 52.381 0.00 0.00 40.85 5.54
2251 3245 2.354704 CCTCCTGACTTTATTGTCGGCA 60.355 50.000 0.00 0.00 40.85 5.69
2252 3246 2.673368 CTCCTGACTTTATTGTCGGCAC 59.327 50.000 0.00 0.00 40.85 5.01
2266 3260 3.290098 GGCACGCTCGTAAACAATG 57.710 52.632 0.00 0.00 0.00 2.82
2267 3261 0.515564 GGCACGCTCGTAAACAATGT 59.484 50.000 0.00 0.00 0.00 2.71
2268 3262 1.727880 GGCACGCTCGTAAACAATGTA 59.272 47.619 0.00 0.00 0.00 2.29
2269 3263 2.158058 GGCACGCTCGTAAACAATGTAA 59.842 45.455 0.00 0.00 0.00 2.41
2270 3264 3.364167 GGCACGCTCGTAAACAATGTAAA 60.364 43.478 0.00 0.00 0.00 2.01
2271 3265 3.596562 GCACGCTCGTAAACAATGTAAAC 59.403 43.478 0.00 0.00 0.00 2.01
2272 3266 3.830882 CACGCTCGTAAACAATGTAAACG 59.169 43.478 12.39 12.39 34.99 3.60
2273 3267 3.490526 ACGCTCGTAAACAATGTAAACGT 59.509 39.130 16.37 5.00 35.21 3.99
2274 3268 4.025813 ACGCTCGTAAACAATGTAAACGTT 60.026 37.500 16.37 0.00 35.21 3.99
2275 3269 4.899616 CGCTCGTAAACAATGTAAACGTTT 59.100 37.500 18.90 18.90 36.79 3.60
2276 3270 5.393163 CGCTCGTAAACAATGTAAACGTTTT 59.607 36.000 20.19 0.00 34.78 2.43
2277 3271 6.395741 CGCTCGTAAACAATGTAAACGTTTTC 60.396 38.462 20.19 14.83 34.78 2.29
2278 3272 6.411492 GCTCGTAAACAATGTAAACGTTTTCA 59.589 34.615 20.19 20.33 34.78 2.69
2279 3273 7.112426 GCTCGTAAACAATGTAAACGTTTTCAT 59.888 33.333 22.72 22.72 34.78 2.57
2280 3274 8.259240 TCGTAAACAATGTAAACGTTTTCATG 57.741 30.769 27.06 22.33 34.78 3.07
2281 3275 8.121086 TCGTAAACAATGTAAACGTTTTCATGA 58.879 29.630 27.06 17.50 34.78 3.07
2282 3276 8.897809 CGTAAACAATGTAAACGTTTTCATGAT 58.102 29.630 27.06 17.93 34.78 2.45
2308 3302 9.474313 TTTAATAAAGTTAGCCATGATGGTCTT 57.526 29.630 13.84 9.79 40.46 3.01
2309 3303 7.573968 AATAAAGTTAGCCATGATGGTCTTC 57.426 36.000 13.84 7.69 40.46 2.87
2311 3305 3.118531 AGTTAGCCATGATGGTCTTCCT 58.881 45.455 13.84 3.59 40.46 3.36
2334 3328 1.908065 AAAAGCACCGCATTAATCGC 58.092 45.000 0.00 0.00 0.00 4.58
2335 3329 1.094785 AAAGCACCGCATTAATCGCT 58.905 45.000 7.83 0.00 0.00 4.93
2336 3330 1.948104 AAGCACCGCATTAATCGCTA 58.052 45.000 7.83 0.00 0.00 4.26
2337 3331 1.502231 AGCACCGCATTAATCGCTAG 58.498 50.000 7.83 0.00 0.00 3.42
2338 3332 1.068588 AGCACCGCATTAATCGCTAGA 59.931 47.619 0.00 0.00 0.00 2.43
2339 3333 1.864711 GCACCGCATTAATCGCTAGAA 59.135 47.619 0.00 0.00 0.00 2.10
2341 3335 3.242608 GCACCGCATTAATCGCTAGAAAA 60.243 43.478 0.00 0.00 0.00 2.29
2342 3336 4.554723 GCACCGCATTAATCGCTAGAAAAT 60.555 41.667 0.00 0.00 0.00 1.82
2343 3337 5.140177 CACCGCATTAATCGCTAGAAAATC 58.860 41.667 0.00 0.00 0.00 2.17
2345 3339 4.386230 CGCATTAATCGCTAGAAAATCGG 58.614 43.478 0.00 0.00 0.00 4.18
2346 3340 4.666655 CGCATTAATCGCTAGAAAATCGGG 60.667 45.833 0.00 0.00 0.00 5.14
2347 3341 4.451096 GCATTAATCGCTAGAAAATCGGGA 59.549 41.667 0.00 0.00 0.00 5.14
2348 3342 5.389935 GCATTAATCGCTAGAAAATCGGGAG 60.390 44.000 0.00 0.00 0.00 4.30
2349 3343 2.821991 ATCGCTAGAAAATCGGGAGG 57.178 50.000 0.00 0.00 0.00 4.30
2350 3344 0.750850 TCGCTAGAAAATCGGGAGGG 59.249 55.000 0.00 0.00 0.00 4.30
2351 3345 0.880718 CGCTAGAAAATCGGGAGGGC 60.881 60.000 0.00 0.00 0.00 5.19
2352 3346 0.535328 GCTAGAAAATCGGGAGGGCC 60.535 60.000 0.00 0.00 0.00 5.80
2353 3347 0.249911 CTAGAAAATCGGGAGGGCCG 60.250 60.000 0.00 0.00 33.83 6.13
2354 3348 2.319890 TAGAAAATCGGGAGGGCCGC 62.320 60.000 0.00 0.00 33.83 6.53
2357 3351 3.995506 AAATCGGGAGGGCCGCTTG 62.996 63.158 7.35 0.00 33.83 4.01
2367 3361 4.143333 GCCGCTTGCGTCCCTAGA 62.143 66.667 13.97 0.00 0.00 2.43
2369 3363 1.144057 CCGCTTGCGTCCCTAGATT 59.856 57.895 13.97 0.00 0.00 2.40
2370 3364 0.462047 CCGCTTGCGTCCCTAGATTT 60.462 55.000 13.97 0.00 0.00 2.17
2371 3365 1.369625 CGCTTGCGTCCCTAGATTTT 58.630 50.000 6.86 0.00 0.00 1.82
2372 3366 1.737793 CGCTTGCGTCCCTAGATTTTT 59.262 47.619 6.86 0.00 0.00 1.94
2374 3368 2.732282 GCTTGCGTCCCTAGATTTTTGC 60.732 50.000 0.00 0.00 0.00 3.68
2375 3369 1.459450 TGCGTCCCTAGATTTTTGCC 58.541 50.000 0.00 0.00 0.00 4.52
2376 3370 1.004277 TGCGTCCCTAGATTTTTGCCT 59.996 47.619 0.00 0.00 0.00 4.75
2378 3372 1.933853 CGTCCCTAGATTTTTGCCTCG 59.066 52.381 0.00 0.00 0.00 4.63
2379 3373 2.289565 GTCCCTAGATTTTTGCCTCGG 58.710 52.381 0.00 0.00 0.00 4.63
2380 3374 1.211949 TCCCTAGATTTTTGCCTCGGG 59.788 52.381 0.00 0.00 36.90 5.14
2391 3385 4.511246 CCTCGGGCCCACATGCAT 62.511 66.667 24.92 0.00 0.00 3.96
2392 3386 3.214123 CTCGGGCCCACATGCATG 61.214 66.667 25.09 25.09 0.00 4.06
2402 3396 0.387929 CACATGCATGCCCAATCCTC 59.612 55.000 26.53 0.00 0.00 3.71
2403 3397 0.260816 ACATGCATGCCCAATCCTCT 59.739 50.000 26.53 0.00 0.00 3.69
2404 3398 0.959553 CATGCATGCCCAATCCTCTC 59.040 55.000 14.93 0.00 0.00 3.20
2405 3399 0.536687 ATGCATGCCCAATCCTCTCG 60.537 55.000 16.68 0.00 0.00 4.04
2409 3940 2.892425 GCCCAATCCTCTCGTGCG 60.892 66.667 0.00 0.00 0.00 5.34
2411 3942 2.579201 CCAATCCTCTCGTGCGGT 59.421 61.111 0.00 0.00 0.00 5.68
2414 3945 1.741770 AATCCTCTCGTGCGGTTGC 60.742 57.895 0.00 0.00 43.20 4.17
2417 3948 3.782244 CTCTCGTGCGGTTGCTGC 61.782 66.667 0.00 0.00 43.34 5.25
2432 3963 2.997897 TGCATGCATTGGCTGGCA 60.998 55.556 18.46 6.78 43.79 4.92
2433 3964 2.202878 GCATGCATTGGCTGGCAG 60.203 61.111 14.21 10.94 44.24 4.85
2434 3965 2.717044 GCATGCATTGGCTGGCAGA 61.717 57.895 20.86 0.00 44.24 4.26
2435 3966 1.437573 CATGCATTGGCTGGCAGAG 59.562 57.895 20.86 2.84 44.24 3.35
2436 3967 1.035385 CATGCATTGGCTGGCAGAGA 61.035 55.000 20.86 2.73 44.24 3.10
2437 3968 0.752009 ATGCATTGGCTGGCAGAGAG 60.752 55.000 20.86 3.59 44.24 3.20
2438 3969 1.077930 GCATTGGCTGGCAGAGAGA 60.078 57.895 20.86 0.30 36.96 3.10
2441 3972 1.948145 CATTGGCTGGCAGAGAGAATC 59.052 52.381 20.86 0.00 0.00 2.52
2443 3974 1.886777 GGCTGGCAGAGAGAATCGC 60.887 63.158 20.86 0.00 42.67 4.58
2444 3975 2.236382 GCTGGCAGAGAGAATCGCG 61.236 63.158 20.86 0.00 41.02 5.87
2445 3976 2.202797 TGGCAGAGAGAATCGCGC 60.203 61.111 0.00 0.00 41.02 6.86
2448 3979 2.854214 GCAGAGAGAATCGCGCGTG 61.854 63.158 30.98 18.68 41.02 5.34
2450 3981 1.226435 AGAGAGAATCGCGCGTGTC 60.226 57.895 30.98 25.75 41.02 3.67
2451 3982 1.514228 GAGAGAATCGCGCGTGTCA 60.514 57.895 30.98 11.14 42.67 3.58
2452 3983 1.071019 GAGAGAATCGCGCGTGTCAA 61.071 55.000 30.98 10.69 42.67 3.18
2453 3984 0.458543 AGAGAATCGCGCGTGTCAAT 60.459 50.000 30.98 12.88 42.67 2.57
2456 3987 1.996898 AGAATCGCGCGTGTCAATTAA 59.003 42.857 30.98 7.17 0.00 1.40
2457 3988 2.607635 AGAATCGCGCGTGTCAATTAAT 59.392 40.909 30.98 9.55 0.00 1.40
2459 3990 4.269123 AGAATCGCGCGTGTCAATTAATTA 59.731 37.500 30.98 5.43 0.00 1.40
2460 3991 3.562781 TCGCGCGTGTCAATTAATTAG 57.437 42.857 30.98 0.00 0.00 1.73
2461 3992 2.283086 TCGCGCGTGTCAATTAATTAGG 59.717 45.455 30.98 0.00 0.00 2.69
2462 3993 2.029970 CGCGCGTGTCAATTAATTAGGT 59.970 45.455 24.19 0.00 0.00 3.08
2463 3994 3.350912 GCGCGTGTCAATTAATTAGGTG 58.649 45.455 8.43 0.00 0.00 4.00
2464 3995 3.062909 GCGCGTGTCAATTAATTAGGTGA 59.937 43.478 8.43 0.00 0.00 4.02
2466 3997 4.328983 CGCGTGTCAATTAATTAGGTGAGT 59.671 41.667 0.00 0.00 0.00 3.41
2467 3998 5.163893 CGCGTGTCAATTAATTAGGTGAGTT 60.164 40.000 0.00 0.00 0.00 3.01
2469 4000 7.412129 CGCGTGTCAATTAATTAGGTGAGTTAA 60.412 37.037 0.00 0.00 0.00 2.01
2470 4001 8.395633 GCGTGTCAATTAATTAGGTGAGTTAAT 58.604 33.333 0.00 0.00 31.33 1.40
2476 4007 9.736023 CAATTAATTAGGTGAGTTAATTCCAGC 57.264 33.333 0.00 0.00 36.44 4.85
2477 4008 7.548196 TTAATTAGGTGAGTTAATTCCAGCG 57.452 36.000 0.00 0.00 33.85 5.18
2478 4009 4.546829 TTAGGTGAGTTAATTCCAGCGT 57.453 40.909 0.00 0.00 33.94 5.07
2479 4010 3.418684 AGGTGAGTTAATTCCAGCGTT 57.581 42.857 0.00 0.00 33.94 4.84
2482 4013 3.424433 GGTGAGTTAATTCCAGCGTTTCG 60.424 47.826 0.00 0.00 0.00 3.46
2483 4014 3.430895 GTGAGTTAATTCCAGCGTTTCGA 59.569 43.478 0.00 0.00 0.00 3.71
2484 4015 4.059511 TGAGTTAATTCCAGCGTTTCGAA 58.940 39.130 0.00 0.00 0.00 3.71
2485 4016 4.693566 TGAGTTAATTCCAGCGTTTCGAAT 59.306 37.500 0.00 0.00 0.00 3.34
2486 4017 4.969816 AGTTAATTCCAGCGTTTCGAATG 58.030 39.130 0.00 0.00 0.00 2.67
2487 4018 2.262572 AATTCCAGCGTTTCGAATGC 57.737 45.000 13.36 13.36 43.75 3.56
2488 4019 1.164411 ATTCCAGCGTTTCGAATGCA 58.836 45.000 20.70 0.00 45.82 3.96
2489 4020 0.947960 TTCCAGCGTTTCGAATGCAA 59.052 45.000 20.70 7.55 45.82 4.08
2490 4021 1.164411 TCCAGCGTTTCGAATGCAAT 58.836 45.000 20.70 3.05 45.82 3.56
2493 4024 1.906966 CAGCGTTTCGAATGCAATGTC 59.093 47.619 20.70 0.00 45.82 3.06
2494 4025 0.900547 GCGTTTCGAATGCAATGTCG 59.099 50.000 15.61 10.57 42.93 4.35
2502 4033 5.538067 TCGAATGCAATGTCGAATTAACA 57.462 34.783 15.54 0.00 42.92 2.41
2504 4035 5.792962 TCGAATGCAATGTCGAATTAACAAC 59.207 36.000 15.54 0.00 42.92 3.32
2507 4038 5.041951 TGCAATGTCGAATTAACAACTCC 57.958 39.130 0.00 0.00 0.00 3.85
2508 4039 4.083003 TGCAATGTCGAATTAACAACTCCC 60.083 41.667 0.00 0.00 0.00 4.30
2509 4040 4.647964 CAATGTCGAATTAACAACTCCCG 58.352 43.478 0.00 0.00 0.00 5.14
2510 4041 3.389925 TGTCGAATTAACAACTCCCGT 57.610 42.857 0.00 0.00 0.00 5.28
2511 4042 3.061322 TGTCGAATTAACAACTCCCGTG 58.939 45.455 0.00 0.00 0.00 4.94
2512 4043 3.243805 TGTCGAATTAACAACTCCCGTGA 60.244 43.478 0.00 0.00 0.00 4.35
2513 4044 3.742369 GTCGAATTAACAACTCCCGTGAA 59.258 43.478 0.00 0.00 0.00 3.18
2515 4046 4.998672 TCGAATTAACAACTCCCGTGAATT 59.001 37.500 0.00 0.00 0.00 2.17
2516 4047 5.086058 CGAATTAACAACTCCCGTGAATTG 58.914 41.667 0.00 0.00 0.00 2.32
2517 4048 3.907894 TTAACAACTCCCGTGAATTGC 57.092 42.857 0.00 0.00 0.00 3.56
2519 4050 1.523758 ACAACTCCCGTGAATTGCTC 58.476 50.000 0.00 0.00 0.00 4.26
2520 4051 1.202758 ACAACTCCCGTGAATTGCTCA 60.203 47.619 0.00 0.00 0.00 4.26
2528 4059 1.507630 TGAATTGCTCACATGCGGC 59.492 52.632 0.00 0.00 35.36 6.53
2529 4060 1.226773 GAATTGCTCACATGCGGCC 60.227 57.895 0.00 0.00 35.36 6.13
2530 4061 1.660560 GAATTGCTCACATGCGGCCT 61.661 55.000 0.00 0.00 35.36 5.19
2531 4062 1.252904 AATTGCTCACATGCGGCCTT 61.253 50.000 0.00 0.00 35.36 4.35
2532 4063 1.940883 ATTGCTCACATGCGGCCTTG 61.941 55.000 0.00 0.00 35.36 3.61
2533 4064 3.058160 GCTCACATGCGGCCTTGT 61.058 61.111 0.00 0.00 0.00 3.16
2534 4065 1.745115 GCTCACATGCGGCCTTGTA 60.745 57.895 0.00 0.00 0.00 2.41
2535 4066 1.305219 GCTCACATGCGGCCTTGTAA 61.305 55.000 0.00 0.00 0.00 2.41
2536 4067 1.164411 CTCACATGCGGCCTTGTAAA 58.836 50.000 0.00 0.00 0.00 2.01
2537 4068 1.745087 CTCACATGCGGCCTTGTAAAT 59.255 47.619 0.00 0.00 0.00 1.40
2538 4069 2.942376 CTCACATGCGGCCTTGTAAATA 59.058 45.455 0.00 0.00 0.00 1.40
2539 4070 2.680841 TCACATGCGGCCTTGTAAATAC 59.319 45.455 0.00 0.00 0.00 1.89
2541 4072 1.002900 CATGCGGCCTTGTAAATACGG 60.003 52.381 0.00 0.00 0.00 4.02
2542 4073 0.249676 TGCGGCCTTGTAAATACGGA 59.750 50.000 0.00 0.00 0.00 4.69
2544 4075 0.925466 CGGCCTTGTAAATACGGACG 59.075 55.000 0.00 0.00 42.22 4.79
2546 4077 1.648504 GCCTTGTAAATACGGACGCT 58.351 50.000 0.00 0.00 0.00 5.07
2548 4079 3.387397 GCCTTGTAAATACGGACGCTAT 58.613 45.455 0.00 0.00 0.00 2.97
2549 4080 3.183775 GCCTTGTAAATACGGACGCTATG 59.816 47.826 0.00 0.00 0.00 2.23
2551 4082 4.208460 CCTTGTAAATACGGACGCTATGTG 59.792 45.833 0.00 0.00 0.00 3.21
2552 4083 3.708890 TGTAAATACGGACGCTATGTGG 58.291 45.455 0.00 0.00 0.00 4.17
2554 4085 2.218953 AATACGGACGCTATGTGGTG 57.781 50.000 0.00 0.00 0.00 4.17
2555 4086 0.387929 ATACGGACGCTATGTGGTGG 59.612 55.000 0.00 0.00 0.00 4.61
2556 4087 2.287457 TACGGACGCTATGTGGTGGC 62.287 60.000 0.00 0.00 0.00 5.01
2559 4090 1.878522 GACGCTATGTGGTGGCTCG 60.879 63.158 0.00 0.00 31.07 5.03
2560 4091 2.586079 CGCTATGTGGTGGCTCGG 60.586 66.667 0.00 0.00 31.07 4.63
2561 4092 2.203070 GCTATGTGGTGGCTCGGG 60.203 66.667 0.00 0.00 0.00 5.14
2562 4093 2.505982 CTATGTGGTGGCTCGGGG 59.494 66.667 0.00 0.00 0.00 5.73
2564 4095 1.910580 CTATGTGGTGGCTCGGGGTT 61.911 60.000 0.00 0.00 0.00 4.11
2565 4096 1.906105 TATGTGGTGGCTCGGGGTTC 61.906 60.000 0.00 0.00 0.00 3.62
2566 4097 3.637273 GTGGTGGCTCGGGGTTCT 61.637 66.667 0.00 0.00 0.00 3.01
2567 4098 2.120940 TGGTGGCTCGGGGTTCTA 59.879 61.111 0.00 0.00 0.00 2.10
2568 4099 1.306654 TGGTGGCTCGGGGTTCTAT 60.307 57.895 0.00 0.00 0.00 1.98
2570 4101 1.125633 GGTGGCTCGGGGTTCTATAA 58.874 55.000 0.00 0.00 0.00 0.98
2571 4102 1.487558 GGTGGCTCGGGGTTCTATAAA 59.512 52.381 0.00 0.00 0.00 1.40
2572 4103 2.105993 GGTGGCTCGGGGTTCTATAAAT 59.894 50.000 0.00 0.00 0.00 1.40
2573 4104 3.400255 GTGGCTCGGGGTTCTATAAATC 58.600 50.000 0.00 0.00 0.00 2.17
2574 4105 2.370849 TGGCTCGGGGTTCTATAAATCC 59.629 50.000 0.00 0.00 0.00 3.01
2575 4106 2.612221 GGCTCGGGGTTCTATAAATCCG 60.612 54.545 0.00 0.00 38.92 4.18
2576 4107 2.612221 GCTCGGGGTTCTATAAATCCGG 60.612 54.545 0.00 0.00 38.21 5.14
2577 4108 2.895404 CTCGGGGTTCTATAAATCCGGA 59.105 50.000 6.61 6.61 38.21 5.14
2578 4109 2.629617 TCGGGGTTCTATAAATCCGGAC 59.370 50.000 6.12 0.00 38.21 4.79
2579 4110 2.608752 CGGGGTTCTATAAATCCGGACG 60.609 54.545 6.12 0.00 34.54 4.79
2580 4111 2.289257 GGGGTTCTATAAATCCGGACGG 60.289 54.545 6.12 3.96 0.00 4.79
2589 4120 2.738480 TCCGGACGGACTGGTTTG 59.262 61.111 9.76 0.00 44.89 2.93
2590 4121 1.833492 TCCGGACGGACTGGTTTGA 60.833 57.895 9.76 0.00 44.89 2.69
2591 4122 1.374252 CCGGACGGACTGGTTTGAG 60.374 63.158 4.40 0.00 40.03 3.02
2592 4123 1.374252 CGGACGGACTGGTTTGAGG 60.374 63.158 0.00 0.00 0.00 3.86
2593 4124 1.812686 CGGACGGACTGGTTTGAGGA 61.813 60.000 0.00 0.00 0.00 3.71
2594 4125 0.037232 GGACGGACTGGTTTGAGGAG 60.037 60.000 0.00 0.00 0.00 3.69
2595 4126 0.670854 GACGGACTGGTTTGAGGAGC 60.671 60.000 0.00 0.00 0.00 4.70
2596 4127 1.376037 CGGACTGGTTTGAGGAGCC 60.376 63.158 0.00 0.00 0.00 4.70
2597 4128 1.831652 CGGACTGGTTTGAGGAGCCT 61.832 60.000 0.00 0.00 0.00 4.58
2598 4129 1.276622 GGACTGGTTTGAGGAGCCTA 58.723 55.000 0.00 0.00 0.00 3.93
2599 4130 1.840635 GGACTGGTTTGAGGAGCCTAT 59.159 52.381 0.00 0.00 0.00 2.57
2600 4131 2.420687 GGACTGGTTTGAGGAGCCTATG 60.421 54.545 0.00 0.00 0.00 2.23
2601 4132 2.501723 GACTGGTTTGAGGAGCCTATGA 59.498 50.000 0.00 0.00 0.00 2.15
2602 4133 2.503356 ACTGGTTTGAGGAGCCTATGAG 59.497 50.000 0.00 0.00 0.00 2.90
2603 4134 1.839994 TGGTTTGAGGAGCCTATGAGG 59.160 52.381 0.00 0.00 38.80 3.86
2604 4135 1.141858 GGTTTGAGGAGCCTATGAGGG 59.858 57.143 0.00 0.00 35.37 4.30
2605 4136 2.119495 GTTTGAGGAGCCTATGAGGGA 58.881 52.381 0.00 0.00 35.37 4.20
2606 4137 2.708325 GTTTGAGGAGCCTATGAGGGAT 59.292 50.000 0.00 0.00 35.37 3.85
2607 4138 3.904339 GTTTGAGGAGCCTATGAGGGATA 59.096 47.826 0.00 0.00 35.37 2.59
2608 4139 3.176924 TGAGGAGCCTATGAGGGATAC 57.823 52.381 0.00 0.00 35.37 2.24
2609 4140 2.724672 TGAGGAGCCTATGAGGGATACT 59.275 50.000 0.00 0.00 38.86 2.12
2610 4141 3.096092 GAGGAGCCTATGAGGGATACTG 58.904 54.545 0.00 0.00 35.86 2.74
2611 4142 2.452823 AGGAGCCTATGAGGGATACTGT 59.547 50.000 0.00 0.00 34.21 3.55
2612 4143 3.116551 AGGAGCCTATGAGGGATACTGTT 60.117 47.826 0.00 0.00 34.21 3.16
2613 4144 3.259625 GGAGCCTATGAGGGATACTGTTC 59.740 52.174 0.00 0.00 35.37 3.18
2614 4145 3.898123 GAGCCTATGAGGGATACTGTTCA 59.102 47.826 0.00 0.00 35.37 3.18
2615 4146 4.497516 AGCCTATGAGGGATACTGTTCAT 58.502 43.478 0.00 0.00 35.37 2.57
2616 4147 4.910304 AGCCTATGAGGGATACTGTTCATT 59.090 41.667 0.00 0.00 35.37 2.57
2617 4148 5.370880 AGCCTATGAGGGATACTGTTCATTT 59.629 40.000 0.00 0.00 35.37 2.32
2618 4149 6.558775 AGCCTATGAGGGATACTGTTCATTTA 59.441 38.462 0.00 0.00 35.37 1.40
2619 4150 6.651225 GCCTATGAGGGATACTGTTCATTTAC 59.349 42.308 0.00 0.00 35.37 2.01
2620 4151 7.473511 GCCTATGAGGGATACTGTTCATTTACT 60.474 40.741 0.00 0.00 35.37 2.24
2621 4152 8.432805 CCTATGAGGGATACTGTTCATTTACTT 58.567 37.037 0.00 0.00 35.12 2.24
2624 4155 9.784531 ATGAGGGATACTGTTCATTTACTTATG 57.215 33.333 0.00 0.00 31.37 1.90
2625 4156 8.210946 TGAGGGATACTGTTCATTTACTTATGG 58.789 37.037 0.00 0.00 0.00 2.74
2626 4157 8.331931 AGGGATACTGTTCATTTACTTATGGA 57.668 34.615 0.00 0.00 0.00 3.41
2627 4158 8.778059 AGGGATACTGTTCATTTACTTATGGAA 58.222 33.333 0.00 0.00 0.00 3.53
2628 4159 9.403583 GGGATACTGTTCATTTACTTATGGAAA 57.596 33.333 0.00 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
155 157 2.526888 TCGTTCCTACCAGATGTCCT 57.473 50.000 0.00 0.00 0.00 3.85
159 161 3.684788 CCTTGTTTCGTTCCTACCAGATG 59.315 47.826 0.00 0.00 0.00 2.90
188 190 2.505819 ACTGCCGGAGATTTATTCCTGT 59.494 45.455 5.05 0.00 32.34 4.00
204 206 3.243002 GCTCAATGATCTTGCTAACTGCC 60.243 47.826 0.00 0.00 42.00 4.85
235 238 5.988561 GCAAGACACCATTGTTCCAAATTTA 59.011 36.000 0.00 0.00 35.47 1.40
291 294 4.565166 TCGGATACAATTTCACGTGATGTC 59.435 41.667 22.77 13.74 0.00 3.06
305 308 0.742505 CCTACGTGCCTCGGATACAA 59.257 55.000 0.00 0.00 44.69 2.41
320 323 4.862823 AGCCCCTCGCCTCCCTAC 62.863 72.222 0.00 0.00 38.78 3.18
325 328 1.002011 AAAAAGAGCCCCTCGCCTC 60.002 57.895 0.00 0.00 38.78 4.70
345 348 5.941948 AGGAAAATAGACAGAAAACACGG 57.058 39.130 0.00 0.00 0.00 4.94
400 404 5.711506 TCATTGATTTAGCAGAAGAAAGGCA 59.288 36.000 0.00 0.00 0.00 4.75
406 410 7.056006 TGGCTTATCATTGATTTAGCAGAAGA 58.944 34.615 23.55 8.61 33.32 2.87
462 470 6.558009 CATAGTAGTGTTTCATTGCATTGCT 58.442 36.000 10.49 0.00 0.00 3.91
510 518 7.847078 CGTGCAATTAAAGATTTGGCATAAATG 59.153 33.333 3.26 0.00 0.00 2.32
516 524 4.250116 ACGTGCAATTAAAGATTTGGCA 57.750 36.364 0.00 0.00 0.00 4.92
544 552 7.889589 ACAAAGCAGCCTTTAAATATTTCAC 57.110 32.000 3.39 0.00 39.20 3.18
653 661 4.524328 AGAAAACATGCCTAAACCCTTGAG 59.476 41.667 0.00 0.00 0.00 3.02
782 793 5.567423 GCAAGTACAAGCCAAGAATTTCCAT 60.567 40.000 0.00 0.00 0.00 3.41
1327 1349 2.191375 CATGGATGTCAGCCCGCT 59.809 61.111 4.29 0.00 0.00 5.52
1382 1404 2.595463 GCCTTGCCACAGACTGCA 60.595 61.111 1.25 0.00 35.27 4.41
1465 1487 3.199946 AGCCTGCTTGCCTACACTAATTA 59.800 43.478 0.00 0.00 0.00 1.40
1658 2530 8.453238 AACATACCACATACAACAACAAGTAA 57.547 30.769 0.00 0.00 0.00 2.24
1761 2633 3.205089 CGTTGCGAGTAAAAAGTTCGTC 58.795 45.455 0.00 0.00 36.74 4.20
1875 2747 2.172717 GCTTTGGCTCTTGGGACCTATA 59.827 50.000 0.00 0.00 35.22 1.31
1915 2787 3.737032 TGGTTATTGCGATGACCGATA 57.263 42.857 20.03 3.30 43.12 2.92
1916 2788 2.613026 TGGTTATTGCGATGACCGAT 57.387 45.000 20.03 0.00 43.12 4.18
1917 2789 2.388310 TTGGTTATTGCGATGACCGA 57.612 45.000 20.03 16.62 43.12 4.69
1918 2790 2.611751 TGATTGGTTATTGCGATGACCG 59.388 45.455 20.03 0.00 43.12 4.79
1920 2792 3.621794 GCTGATTGGTTATTGCGATGAC 58.378 45.455 0.07 0.07 0.00 3.06
1923 2795 2.288666 ACGCTGATTGGTTATTGCGAT 58.711 42.857 11.99 0.00 39.90 4.58
1926 2798 3.485947 TGAACGCTGATTGGTTATTGC 57.514 42.857 0.00 0.00 0.00 3.56
1928 2800 4.943705 AGTGATGAACGCTGATTGGTTATT 59.056 37.500 0.00 0.00 37.99 1.40
1929 2801 4.517285 AGTGATGAACGCTGATTGGTTAT 58.483 39.130 0.00 0.00 37.99 1.89
1930 2802 3.937814 AGTGATGAACGCTGATTGGTTA 58.062 40.909 0.00 0.00 37.99 2.85
1934 2806 4.631377 TCCTTAAGTGATGAACGCTGATTG 59.369 41.667 0.97 0.00 39.46 2.67
1937 2809 3.953712 TCCTTAAGTGATGAACGCTGA 57.046 42.857 0.97 0.00 39.46 4.26
1938 2810 4.690748 TCTTTCCTTAAGTGATGAACGCTG 59.309 41.667 0.97 0.00 39.46 5.18
1939 2811 4.894784 TCTTTCCTTAAGTGATGAACGCT 58.105 39.130 0.97 0.00 41.48 5.07
1940 2812 4.929808 TCTCTTTCCTTAAGTGATGAACGC 59.070 41.667 0.97 0.00 32.85 4.84
1942 2814 5.934625 TGCTCTCTTTCCTTAAGTGATGAAC 59.065 40.000 0.97 0.00 36.20 3.18
1945 2817 4.633565 GGTGCTCTCTTTCCTTAAGTGATG 59.366 45.833 0.97 0.00 36.20 3.07
1947 2819 3.646162 TGGTGCTCTCTTTCCTTAAGTGA 59.354 43.478 0.97 0.00 35.63 3.41
1948 2820 3.748568 GTGGTGCTCTCTTTCCTTAAGTG 59.251 47.826 0.97 0.00 35.28 3.16
1950 2822 4.008074 TGTGGTGCTCTCTTTCCTTAAG 57.992 45.455 0.00 0.00 35.04 1.85
1957 2829 3.326006 TCTCTCAATGTGGTGCTCTCTTT 59.674 43.478 0.00 0.00 0.00 2.52
1958 2830 2.902486 TCTCTCAATGTGGTGCTCTCTT 59.098 45.455 0.00 0.00 0.00 2.85
1959 2831 2.533916 TCTCTCAATGTGGTGCTCTCT 58.466 47.619 0.00 0.00 0.00 3.10
1960 2832 3.196463 CATCTCTCAATGTGGTGCTCTC 58.804 50.000 0.00 0.00 0.00 3.20
1963 2835 1.681166 GCCATCTCTCAATGTGGTGCT 60.681 52.381 0.00 0.00 34.23 4.40
1964 2836 0.737219 GCCATCTCTCAATGTGGTGC 59.263 55.000 0.00 0.00 34.23 5.01
1967 2839 1.676746 CAGGCCATCTCTCAATGTGG 58.323 55.000 5.01 0.00 34.84 4.17
1969 2841 0.106819 GCCAGGCCATCTCTCAATGT 60.107 55.000 5.01 0.00 0.00 2.71
1973 2967 0.627451 AAATGCCAGGCCATCTCTCA 59.373 50.000 9.64 0.00 0.00 3.27
1976 2970 1.440476 GCAAATGCCAGGCCATCTC 59.560 57.895 9.64 0.00 34.31 2.75
1990 2984 3.360867 TGAAACCAAGAGAGTTGGCAAA 58.639 40.909 0.00 0.00 43.23 3.68
1995 2989 6.814506 ATCTGATTGAAACCAAGAGAGTTG 57.185 37.500 0.00 0.00 0.00 3.16
2009 3003 4.516323 TGATTCCGCTTCAATCTGATTGA 58.484 39.130 25.05 25.05 46.77 2.57
2010 3004 4.573607 TCTGATTCCGCTTCAATCTGATTG 59.426 41.667 21.51 21.51 41.57 2.67
2011 3005 4.774124 TCTGATTCCGCTTCAATCTGATT 58.226 39.130 0.00 0.00 34.85 2.57
2014 3008 5.496133 AAATCTGATTCCGCTTCAATCTG 57.504 39.130 2.92 0.00 32.32 2.90
2015 3009 6.352516 AGTAAATCTGATTCCGCTTCAATCT 58.647 36.000 2.92 0.00 32.32 2.40
2017 3011 7.396540 AAAGTAAATCTGATTCCGCTTCAAT 57.603 32.000 2.92 0.00 0.00 2.57
2018 3012 6.817765 AAAGTAAATCTGATTCCGCTTCAA 57.182 33.333 2.92 0.00 0.00 2.69
2020 3014 7.975750 ACTTAAAGTAAATCTGATTCCGCTTC 58.024 34.615 2.92 0.00 0.00 3.86
2021 3015 7.923414 ACTTAAAGTAAATCTGATTCCGCTT 57.077 32.000 2.92 5.93 0.00 4.68
2022 3016 9.614792 ATTACTTAAAGTAAATCTGATTCCGCT 57.385 29.630 2.92 0.09 43.16 5.52
2050 3044 8.090214 CCATCTTGTATGACCAGAACAAAAATT 58.910 33.333 0.00 0.00 33.05 1.82
2052 3046 6.549364 ACCATCTTGTATGACCAGAACAAAAA 59.451 34.615 0.00 0.00 33.05 1.94
2053 3047 6.016360 CACCATCTTGTATGACCAGAACAAAA 60.016 38.462 0.00 0.00 33.05 2.44
2054 3048 5.473162 CACCATCTTGTATGACCAGAACAAA 59.527 40.000 0.00 0.00 33.05 2.83
2056 3050 4.565444 CCACCATCTTGTATGACCAGAACA 60.565 45.833 0.00 0.00 0.00 3.18
2057 3051 3.941483 CCACCATCTTGTATGACCAGAAC 59.059 47.826 0.00 0.00 0.00 3.01
2060 3054 2.505407 TCCCACCATCTTGTATGACCAG 59.495 50.000 0.00 0.00 0.00 4.00
2061 3055 2.556766 TCCCACCATCTTGTATGACCA 58.443 47.619 0.00 0.00 0.00 4.02
2062 3056 3.136443 TCATCCCACCATCTTGTATGACC 59.864 47.826 0.00 0.00 0.00 4.02
2064 3058 4.686944 GCTTCATCCCACCATCTTGTATGA 60.687 45.833 0.00 0.00 0.00 2.15
2067 3061 2.846206 AGCTTCATCCCACCATCTTGTA 59.154 45.455 0.00 0.00 0.00 2.41
2068 3062 1.637553 AGCTTCATCCCACCATCTTGT 59.362 47.619 0.00 0.00 0.00 3.16
2069 3063 2.022195 CAGCTTCATCCCACCATCTTG 58.978 52.381 0.00 0.00 0.00 3.02
2071 3065 0.106819 GCAGCTTCATCCCACCATCT 60.107 55.000 0.00 0.00 0.00 2.90
2073 3067 0.395311 CTGCAGCTTCATCCCACCAT 60.395 55.000 0.00 0.00 0.00 3.55
2075 3069 2.413142 GCTGCAGCTTCATCCCACC 61.413 63.158 31.33 0.00 38.21 4.61
2078 3072 0.107508 TAGTGCTGCAGCTTCATCCC 60.108 55.000 36.61 16.36 42.66 3.85
2079 3073 1.964552 ATAGTGCTGCAGCTTCATCC 58.035 50.000 36.61 17.96 42.66 3.51
2080 3074 3.692576 CAAATAGTGCTGCAGCTTCATC 58.307 45.455 36.61 21.17 42.66 2.92
2081 3075 3.777465 CAAATAGTGCTGCAGCTTCAT 57.223 42.857 36.61 23.31 42.66 2.57
2092 3086 8.500474 ATGTCCACACATTCTGCAAATAGTGC 62.500 42.308 8.42 0.00 46.74 4.40
2093 3087 4.216042 TGTCCACACATTCTGCAAATAGTG 59.784 41.667 7.28 7.28 0.00 2.74
2094 3088 4.397420 TGTCCACACATTCTGCAAATAGT 58.603 39.130 0.00 0.00 0.00 2.12
2095 3089 5.571784 ATGTCCACACATTCTGCAAATAG 57.428 39.130 0.00 0.00 40.66 1.73
2096 3090 5.589855 CCTATGTCCACACATTCTGCAAATA 59.410 40.000 0.00 0.00 40.66 1.40
2097 3091 4.400251 CCTATGTCCACACATTCTGCAAAT 59.600 41.667 0.00 0.00 40.66 2.32
2100 3094 2.305635 ACCTATGTCCACACATTCTGCA 59.694 45.455 0.00 0.00 40.66 4.41
2101 3095 2.991250 ACCTATGTCCACACATTCTGC 58.009 47.619 0.00 0.00 40.66 4.26
2102 3096 5.111989 CAGTACCTATGTCCACACATTCTG 58.888 45.833 0.00 0.00 40.66 3.02
2103 3097 4.383118 GCAGTACCTATGTCCACACATTCT 60.383 45.833 0.00 0.00 40.66 2.40
2104 3098 3.871594 GCAGTACCTATGTCCACACATTC 59.128 47.826 0.00 0.00 40.66 2.67
2106 3100 2.837591 TGCAGTACCTATGTCCACACAT 59.162 45.455 0.00 0.00 45.73 3.21
2108 3102 3.328382 TTGCAGTACCTATGTCCACAC 57.672 47.619 0.00 0.00 0.00 3.82
2112 3106 3.214328 CCCAATTGCAGTACCTATGTCC 58.786 50.000 0.00 0.00 0.00 4.02
2114 3108 2.849943 TCCCCAATTGCAGTACCTATGT 59.150 45.455 0.00 0.00 0.00 2.29
2116 3110 2.443255 CCTCCCCAATTGCAGTACCTAT 59.557 50.000 0.00 0.00 0.00 2.57
2118 3112 0.625849 CCTCCCCAATTGCAGTACCT 59.374 55.000 0.00 0.00 0.00 3.08
2119 3113 0.331616 ACCTCCCCAATTGCAGTACC 59.668 55.000 0.00 0.00 0.00 3.34
2120 3114 1.004277 TGACCTCCCCAATTGCAGTAC 59.996 52.381 0.00 0.00 0.00 2.73
2121 3115 1.367346 TGACCTCCCCAATTGCAGTA 58.633 50.000 0.00 0.00 0.00 2.74
2122 3116 0.706433 ATGACCTCCCCAATTGCAGT 59.294 50.000 0.00 0.00 0.00 4.40
2123 3117 1.856629 AATGACCTCCCCAATTGCAG 58.143 50.000 0.00 0.00 0.00 4.41
2124 3118 2.323999 AAATGACCTCCCCAATTGCA 57.676 45.000 0.00 0.00 0.00 4.08
2125 3119 3.701205 AAAAATGACCTCCCCAATTGC 57.299 42.857 0.00 0.00 0.00 3.56
2126 3120 5.178061 GCTTAAAAATGACCTCCCCAATTG 58.822 41.667 0.00 0.00 0.00 2.32
2127 3121 4.843516 TGCTTAAAAATGACCTCCCCAATT 59.156 37.500 0.00 0.00 0.00 2.32
2128 3122 4.424842 TGCTTAAAAATGACCTCCCCAAT 58.575 39.130 0.00 0.00 0.00 3.16
2129 3123 3.850752 TGCTTAAAAATGACCTCCCCAA 58.149 40.909 0.00 0.00 0.00 4.12
2131 3125 4.222810 ACAATGCTTAAAAATGACCTCCCC 59.777 41.667 0.00 0.00 0.00 4.81
2133 3127 7.432252 CGAATACAATGCTTAAAAATGACCTCC 59.568 37.037 0.00 0.00 0.00 4.30
2134 3128 7.968405 ACGAATACAATGCTTAAAAATGACCTC 59.032 33.333 0.00 0.00 0.00 3.85
2137 3131 9.123709 TGAACGAATACAATGCTTAAAAATGAC 57.876 29.630 0.00 0.00 0.00 3.06
2138 3132 9.853555 ATGAACGAATACAATGCTTAAAAATGA 57.146 25.926 0.00 0.00 0.00 2.57
2139 3133 9.890085 CATGAACGAATACAATGCTTAAAAATG 57.110 29.630 0.00 0.00 0.00 2.32
2140 3134 9.638239 ACATGAACGAATACAATGCTTAAAAAT 57.362 25.926 0.00 0.00 0.00 1.82
2146 3140 7.984391 TGATTACATGAACGAATACAATGCTT 58.016 30.769 0.00 0.00 0.00 3.91
2147 3141 7.552458 TGATTACATGAACGAATACAATGCT 57.448 32.000 0.00 0.00 0.00 3.79
2148 3142 7.096885 GCTTGATTACATGAACGAATACAATGC 60.097 37.037 0.00 0.00 0.00 3.56
2150 3144 7.011016 TCGCTTGATTACATGAACGAATACAAT 59.989 33.333 0.00 0.00 0.00 2.71
2153 3147 6.019801 AGTCGCTTGATTACATGAACGAATAC 60.020 38.462 0.00 0.00 0.00 1.89
2154 3148 6.040247 AGTCGCTTGATTACATGAACGAATA 58.960 36.000 0.00 0.00 0.00 1.75
2156 3150 4.242475 AGTCGCTTGATTACATGAACGAA 58.758 39.130 0.00 0.00 0.00 3.85
2157 3151 3.845178 AGTCGCTTGATTACATGAACGA 58.155 40.909 0.00 0.00 0.00 3.85
2159 3153 5.063944 ACATGAGTCGCTTGATTACATGAAC 59.936 40.000 0.00 0.00 35.41 3.18
2160 3154 5.063817 CACATGAGTCGCTTGATTACATGAA 59.936 40.000 0.00 0.00 35.41 2.57
2161 3155 4.567959 CACATGAGTCGCTTGATTACATGA 59.432 41.667 0.00 0.00 35.41 3.07
2162 3156 4.784394 GCACATGAGTCGCTTGATTACATG 60.784 45.833 0.00 0.00 36.40 3.21
2163 3157 3.310774 GCACATGAGTCGCTTGATTACAT 59.689 43.478 0.00 0.00 0.00 2.29
2164 3158 2.672874 GCACATGAGTCGCTTGATTACA 59.327 45.455 0.00 0.00 0.00 2.41
2165 3159 2.932614 AGCACATGAGTCGCTTGATTAC 59.067 45.455 0.00 0.00 31.19 1.89
2166 3160 3.251479 AGCACATGAGTCGCTTGATTA 57.749 42.857 0.00 0.00 31.19 1.75
2167 3161 2.105006 AGCACATGAGTCGCTTGATT 57.895 45.000 0.00 0.00 31.19 2.57
2168 3162 2.819115 CTAGCACATGAGTCGCTTGAT 58.181 47.619 0.00 0.00 35.07 2.57
2169 3163 1.737029 GCTAGCACATGAGTCGCTTGA 60.737 52.381 10.63 0.00 35.07 3.02
2170 3164 0.649475 GCTAGCACATGAGTCGCTTG 59.351 55.000 10.63 4.18 35.07 4.01
2171 3165 0.534412 AGCTAGCACATGAGTCGCTT 59.466 50.000 18.83 0.00 35.07 4.68
2172 3166 1.393603 TAGCTAGCACATGAGTCGCT 58.606 50.000 18.83 4.31 36.53 4.93
2173 3167 1.855360 GTTAGCTAGCACATGAGTCGC 59.145 52.381 18.83 0.00 0.00 5.19
2174 3168 3.428746 AGTTAGCTAGCACATGAGTCG 57.571 47.619 18.83 0.00 0.00 4.18
2175 3169 5.221342 ACCATAGTTAGCTAGCACATGAGTC 60.221 44.000 18.83 0.00 0.00 3.36
2176 3170 4.651503 ACCATAGTTAGCTAGCACATGAGT 59.348 41.667 18.83 12.97 0.00 3.41
2177 3171 5.207110 ACCATAGTTAGCTAGCACATGAG 57.793 43.478 18.83 12.55 0.00 2.90
2178 3172 5.614324 AACCATAGTTAGCTAGCACATGA 57.386 39.130 18.83 0.00 33.27 3.07
2179 3173 6.683974 AAAACCATAGTTAGCTAGCACATG 57.316 37.500 18.83 11.63 34.19 3.21
2180 3174 6.659242 ACAAAAACCATAGTTAGCTAGCACAT 59.341 34.615 18.83 0.00 34.19 3.21
2181 3175 6.001460 ACAAAAACCATAGTTAGCTAGCACA 58.999 36.000 18.83 0.42 34.19 4.57
2182 3176 6.148811 TGACAAAAACCATAGTTAGCTAGCAC 59.851 38.462 18.83 7.34 34.19 4.40
2183 3177 6.148811 GTGACAAAAACCATAGTTAGCTAGCA 59.851 38.462 18.83 0.00 34.19 3.49
2184 3178 6.148811 TGTGACAAAAACCATAGTTAGCTAGC 59.851 38.462 6.62 6.62 34.19 3.42
2185 3179 7.667043 TGTGACAAAAACCATAGTTAGCTAG 57.333 36.000 0.00 0.00 34.19 3.42
2186 3180 7.717875 ACTTGTGACAAAAACCATAGTTAGCTA 59.282 33.333 0.00 0.00 34.19 3.32
2187 3181 6.546034 ACTTGTGACAAAAACCATAGTTAGCT 59.454 34.615 0.00 0.00 34.19 3.32
2188 3182 6.735130 ACTTGTGACAAAAACCATAGTTAGC 58.265 36.000 0.00 0.00 34.19 3.09
2189 3183 8.154649 AGACTTGTGACAAAAACCATAGTTAG 57.845 34.615 0.00 0.00 34.19 2.34
2190 3184 9.048446 GTAGACTTGTGACAAAAACCATAGTTA 57.952 33.333 0.00 0.00 34.19 2.24
2191 3185 7.773690 AGTAGACTTGTGACAAAAACCATAGTT 59.226 33.333 0.00 0.00 38.03 2.24
2192 3186 7.280356 AGTAGACTTGTGACAAAAACCATAGT 58.720 34.615 0.00 0.00 0.00 2.12
2193 3187 7.730364 AGTAGACTTGTGACAAAAACCATAG 57.270 36.000 0.00 0.00 0.00 2.23
2194 3188 7.925993 CAAGTAGACTTGTGACAAAAACCATA 58.074 34.615 13.24 0.00 46.11 2.74
2195 3189 6.795399 CAAGTAGACTTGTGACAAAAACCAT 58.205 36.000 13.24 0.00 46.11 3.55
2196 3190 6.189677 CAAGTAGACTTGTGACAAAAACCA 57.810 37.500 13.24 0.00 46.11 3.67
2205 3199 9.886657 GGCTCATCCAATCAAGTAGACTTGTGA 62.887 44.444 19.23 13.85 43.09 3.58
2206 3200 7.836799 GGCTCATCCAATCAAGTAGACTTGTG 61.837 46.154 19.23 12.39 43.09 3.33
2207 3201 5.859653 GGCTCATCCAATCAAGTAGACTTGT 60.860 44.000 19.23 6.91 43.09 3.16
2208 3202 4.574013 GGCTCATCCAATCAAGTAGACTTG 59.426 45.833 14.97 14.97 43.49 3.16
2209 3203 4.472833 AGGCTCATCCAATCAAGTAGACTT 59.527 41.667 0.00 0.00 37.29 3.01
2210 3204 4.036518 AGGCTCATCCAATCAAGTAGACT 58.963 43.478 0.00 0.00 37.29 3.24
2211 3205 4.376146 GAGGCTCATCCAATCAAGTAGAC 58.624 47.826 10.25 0.00 37.29 2.59
2212 3206 3.389329 GGAGGCTCATCCAATCAAGTAGA 59.611 47.826 17.69 0.00 39.34 2.59
2213 3207 3.390639 AGGAGGCTCATCCAATCAAGTAG 59.609 47.826 17.69 0.00 42.26 2.57
2214 3208 3.135348 CAGGAGGCTCATCCAATCAAGTA 59.865 47.826 17.69 0.00 42.26 2.24
2215 3209 2.092538 CAGGAGGCTCATCCAATCAAGT 60.093 50.000 17.69 0.00 42.26 3.16
2216 3210 2.172082 TCAGGAGGCTCATCCAATCAAG 59.828 50.000 17.69 0.00 42.26 3.02
2217 3211 2.092753 GTCAGGAGGCTCATCCAATCAA 60.093 50.000 17.69 0.00 42.26 2.57
2218 3212 1.487976 GTCAGGAGGCTCATCCAATCA 59.512 52.381 17.69 0.00 42.26 2.57
2219 3213 1.767681 AGTCAGGAGGCTCATCCAATC 59.232 52.381 17.69 0.00 42.26 2.67
2220 3214 1.890552 AGTCAGGAGGCTCATCCAAT 58.109 50.000 17.69 0.00 42.26 3.16
2221 3215 1.661463 AAGTCAGGAGGCTCATCCAA 58.339 50.000 17.69 0.00 42.26 3.53
2222 3216 1.661463 AAAGTCAGGAGGCTCATCCA 58.339 50.000 17.69 0.00 42.26 3.41
2223 3217 4.133078 CAATAAAGTCAGGAGGCTCATCC 58.867 47.826 17.69 0.00 39.89 3.51
2224 3218 4.775236 ACAATAAAGTCAGGAGGCTCATC 58.225 43.478 17.69 0.00 0.00 2.92
2225 3219 4.681781 CGACAATAAAGTCAGGAGGCTCAT 60.682 45.833 17.69 6.28 38.43 2.90
2226 3220 3.368427 CGACAATAAAGTCAGGAGGCTCA 60.368 47.826 17.69 0.00 38.43 4.26
2227 3221 3.190874 CGACAATAAAGTCAGGAGGCTC 58.809 50.000 5.78 5.78 38.43 4.70
2228 3222 2.093447 CCGACAATAAAGTCAGGAGGCT 60.093 50.000 0.00 0.00 38.43 4.58
2229 3223 2.280628 CCGACAATAAAGTCAGGAGGC 58.719 52.381 0.00 0.00 38.43 4.70
2230 3224 2.280628 GCCGACAATAAAGTCAGGAGG 58.719 52.381 0.00 0.00 38.43 4.30
2231 3225 2.673368 GTGCCGACAATAAAGTCAGGAG 59.327 50.000 0.00 0.00 38.43 3.69
2232 3226 2.695359 GTGCCGACAATAAAGTCAGGA 58.305 47.619 0.00 0.00 38.43 3.86
2233 3227 1.393539 CGTGCCGACAATAAAGTCAGG 59.606 52.381 0.00 0.00 38.43 3.86
2234 3228 1.201921 GCGTGCCGACAATAAAGTCAG 60.202 52.381 0.00 0.00 38.43 3.51
2235 3229 0.793861 GCGTGCCGACAATAAAGTCA 59.206 50.000 0.00 0.00 38.43 3.41
2236 3230 1.060698 GAGCGTGCCGACAATAAAGTC 59.939 52.381 0.00 0.00 35.19 3.01
2237 3231 1.076332 GAGCGTGCCGACAATAAAGT 58.924 50.000 0.00 0.00 0.00 2.66
2238 3232 0.025001 CGAGCGTGCCGACAATAAAG 59.975 55.000 0.00 0.00 0.00 1.85
2239 3233 0.668096 ACGAGCGTGCCGACAATAAA 60.668 50.000 9.18 0.00 0.00 1.40
2240 3234 0.170784 TACGAGCGTGCCGACAATAA 59.829 50.000 5.69 0.00 0.00 1.40
2241 3235 0.170784 TTACGAGCGTGCCGACAATA 59.829 50.000 5.69 0.00 0.00 1.90
2242 3236 0.668096 TTTACGAGCGTGCCGACAAT 60.668 50.000 5.69 0.00 0.00 2.71
2243 3237 1.300003 TTTACGAGCGTGCCGACAA 60.300 52.632 5.69 0.00 0.00 3.18
2244 3238 2.017783 GTTTACGAGCGTGCCGACA 61.018 57.895 5.69 0.00 0.00 4.35
2245 3239 1.550659 TTGTTTACGAGCGTGCCGAC 61.551 55.000 5.69 0.25 0.00 4.79
2246 3240 0.668096 ATTGTTTACGAGCGTGCCGA 60.668 50.000 5.69 0.00 0.00 5.54
2247 3241 0.518355 CATTGTTTACGAGCGTGCCG 60.518 55.000 5.69 2.02 0.00 5.69
2248 3242 0.515564 ACATTGTTTACGAGCGTGCC 59.484 50.000 5.69 0.00 0.00 5.01
2249 3243 3.443054 TTACATTGTTTACGAGCGTGC 57.557 42.857 5.69 0.00 0.00 5.34
2250 3244 3.830882 CGTTTACATTGTTTACGAGCGTG 59.169 43.478 14.50 0.00 34.36 5.34
2251 3245 3.490526 ACGTTTACATTGTTTACGAGCGT 59.509 39.130 22.15 0.00 36.21 5.07
2252 3246 4.043761 ACGTTTACATTGTTTACGAGCG 57.956 40.909 22.15 9.51 36.21 5.03
2253 3247 6.411492 TGAAAACGTTTACATTGTTTACGAGC 59.589 34.615 15.03 12.38 34.92 5.03
2254 3248 7.879962 TGAAAACGTTTACATTGTTTACGAG 57.120 32.000 15.03 3.76 34.92 4.18
2255 3249 8.121086 TCATGAAAACGTTTACATTGTTTACGA 58.879 29.630 15.03 7.07 34.92 3.43
2256 3250 8.259240 TCATGAAAACGTTTACATTGTTTACG 57.741 30.769 15.03 16.78 34.92 3.18
2279 3273 9.420118 ACCATCATGGCTAACTTTATTAAATCA 57.580 29.630 2.52 0.00 42.67 2.57
2280 3274 9.899226 GACCATCATGGCTAACTTTATTAAATC 57.101 33.333 2.52 0.00 42.67 2.17
2281 3275 9.646522 AGACCATCATGGCTAACTTTATTAAAT 57.353 29.630 2.52 0.00 42.67 1.40
2282 3276 9.474313 AAGACCATCATGGCTAACTTTATTAAA 57.526 29.630 2.52 0.00 42.67 1.52
2283 3277 9.120538 GAAGACCATCATGGCTAACTTTATTAA 57.879 33.333 2.52 0.00 42.67 1.40
2284 3278 7.719633 GGAAGACCATCATGGCTAACTTTATTA 59.280 37.037 2.52 0.00 42.67 0.98
2285 3279 6.547510 GGAAGACCATCATGGCTAACTTTATT 59.452 38.462 2.52 0.00 42.67 1.40
2286 3280 6.064717 GGAAGACCATCATGGCTAACTTTAT 58.935 40.000 2.52 0.00 42.67 1.40
2287 3281 5.191722 AGGAAGACCATCATGGCTAACTTTA 59.808 40.000 2.52 0.00 42.67 1.85
2288 3282 4.018050 AGGAAGACCATCATGGCTAACTTT 60.018 41.667 2.52 0.00 42.67 2.66
2289 3283 3.525199 AGGAAGACCATCATGGCTAACTT 59.475 43.478 2.52 4.71 42.67 2.66
2290 3284 3.118531 AGGAAGACCATCATGGCTAACT 58.881 45.455 2.52 1.66 42.67 2.24
2291 3285 3.567478 AGGAAGACCATCATGGCTAAC 57.433 47.619 2.52 0.00 42.67 2.34
2292 3286 5.708736 TTTAGGAAGACCATCATGGCTAA 57.291 39.130 2.52 0.00 42.67 3.09
2293 3287 5.708736 TTTTAGGAAGACCATCATGGCTA 57.291 39.130 2.52 0.00 42.67 3.93
2319 3313 1.497991 TCTAGCGATTAATGCGGTGC 58.502 50.000 16.75 4.48 39.99 5.01
2320 3314 4.530094 TTTTCTAGCGATTAATGCGGTG 57.470 40.909 16.75 10.09 39.99 4.94
2321 3315 4.084537 CGATTTTCTAGCGATTAATGCGGT 60.085 41.667 13.63 13.63 42.56 5.68
2324 3318 4.451096 TCCCGATTTTCTAGCGATTAATGC 59.549 41.667 0.00 0.00 0.00 3.56
2325 3319 5.120830 CCTCCCGATTTTCTAGCGATTAATG 59.879 44.000 0.00 0.00 0.00 1.90
2326 3320 5.238583 CCTCCCGATTTTCTAGCGATTAAT 58.761 41.667 0.00 0.00 0.00 1.40
2327 3321 4.502604 CCCTCCCGATTTTCTAGCGATTAA 60.503 45.833 0.00 0.00 0.00 1.40
2328 3322 3.006537 CCCTCCCGATTTTCTAGCGATTA 59.993 47.826 0.00 0.00 0.00 1.75
2329 3323 2.224305 CCCTCCCGATTTTCTAGCGATT 60.224 50.000 0.00 0.00 0.00 3.34
2330 3324 1.344763 CCCTCCCGATTTTCTAGCGAT 59.655 52.381 0.00 0.00 0.00 4.58
2332 3326 0.880718 GCCCTCCCGATTTTCTAGCG 60.881 60.000 0.00 0.00 0.00 4.26
2333 3327 0.535328 GGCCCTCCCGATTTTCTAGC 60.535 60.000 0.00 0.00 0.00 3.42
2334 3328 3.708013 GGCCCTCCCGATTTTCTAG 57.292 57.895 0.00 0.00 0.00 2.43
2351 3345 0.462047 AAATCTAGGGACGCAAGCGG 60.462 55.000 19.30 0.00 44.69 5.52
2352 3346 1.369625 AAAATCTAGGGACGCAAGCG 58.630 50.000 13.50 13.50 46.03 4.68
2353 3347 2.732282 GCAAAAATCTAGGGACGCAAGC 60.732 50.000 0.00 0.00 45.62 4.01
2357 3351 1.671328 GAGGCAAAAATCTAGGGACGC 59.329 52.381 0.00 0.00 0.00 5.19
2358 3352 1.933853 CGAGGCAAAAATCTAGGGACG 59.066 52.381 0.00 0.00 0.00 4.79
2359 3353 2.289565 CCGAGGCAAAAATCTAGGGAC 58.710 52.381 0.00 0.00 0.00 4.46
2360 3354 1.211949 CCCGAGGCAAAAATCTAGGGA 59.788 52.381 2.93 0.00 45.21 4.20
2361 3355 1.680338 CCCGAGGCAAAAATCTAGGG 58.320 55.000 0.00 0.00 39.06 3.53
2374 3368 4.511246 ATGCATGTGGGCCCGAGG 62.511 66.667 19.37 9.33 0.00 4.63
2375 3369 3.214123 CATGCATGTGGGCCCGAG 61.214 66.667 19.37 7.82 0.00 4.63
2380 3374 2.653953 GATTGGGCATGCATGTGGGC 62.654 60.000 26.79 14.00 0.00 5.36
2382 3376 1.046472 AGGATTGGGCATGCATGTGG 61.046 55.000 26.79 3.17 0.00 4.17
2383 3377 0.387929 GAGGATTGGGCATGCATGTG 59.612 55.000 26.79 5.68 0.00 3.21
2384 3378 0.260816 AGAGGATTGGGCATGCATGT 59.739 50.000 26.79 7.53 0.00 3.21
2385 3379 0.959553 GAGAGGATTGGGCATGCATG 59.040 55.000 22.70 22.70 0.00 4.06
2386 3380 0.536687 CGAGAGGATTGGGCATGCAT 60.537 55.000 21.36 4.05 0.00 3.96
2387 3381 1.153107 CGAGAGGATTGGGCATGCA 60.153 57.895 21.36 0.00 0.00 3.96
2388 3382 1.153086 ACGAGAGGATTGGGCATGC 60.153 57.895 9.90 9.90 0.00 4.06
2391 3385 2.268920 GCACGAGAGGATTGGGCA 59.731 61.111 0.00 0.00 41.93 5.36
2392 3386 2.892425 CGCACGAGAGGATTGGGC 60.892 66.667 0.00 0.00 38.50 5.36
2393 3387 2.202932 CCGCACGAGAGGATTGGG 60.203 66.667 0.00 0.00 36.74 4.12
2394 3388 1.079127 AACCGCACGAGAGGATTGG 60.079 57.895 9.97 0.00 38.21 3.16
2395 3389 1.970917 GCAACCGCACGAGAGGATTG 61.971 60.000 9.97 10.71 38.21 2.67
2402 3396 3.425713 ATGCAGCAACCGCACGAG 61.426 61.111 0.00 0.00 43.35 4.18
2403 3397 3.725459 CATGCAGCAACCGCACGA 61.725 61.111 0.00 0.00 43.35 4.35
2414 3945 2.202878 GCCAGCCAATGCATGCAG 60.203 61.111 26.69 13.73 41.13 4.41
2417 3948 1.035385 TCTCTGCCAGCCAATGCATG 61.035 55.000 0.00 0.00 41.13 4.06
2420 3951 0.679002 TTCTCTCTGCCAGCCAATGC 60.679 55.000 0.00 0.00 37.95 3.56
2422 3953 1.474677 CGATTCTCTCTGCCAGCCAAT 60.475 52.381 0.00 0.00 0.00 3.16
2424 3955 1.519246 CGATTCTCTCTGCCAGCCA 59.481 57.895 0.00 0.00 0.00 4.75
2427 3958 2.236382 GCGCGATTCTCTCTGCCAG 61.236 63.158 12.10 0.00 0.00 4.85
2432 3963 1.226435 GACACGCGCGATTCTCTCT 60.226 57.895 39.36 8.45 0.00 3.10
2433 3964 1.071019 TTGACACGCGCGATTCTCTC 61.071 55.000 39.36 19.33 0.00 3.20
2434 3965 0.458543 ATTGACACGCGCGATTCTCT 60.459 50.000 39.36 18.25 0.00 3.10
2435 3966 0.370273 AATTGACACGCGCGATTCTC 59.630 50.000 39.36 22.78 0.00 2.87
2436 3967 1.635844 TAATTGACACGCGCGATTCT 58.364 45.000 39.36 11.73 0.00 2.40
2437 3968 2.429213 TTAATTGACACGCGCGATTC 57.571 45.000 39.36 29.38 0.00 2.52
2438 3969 3.398954 AATTAATTGACACGCGCGATT 57.601 38.095 39.36 26.04 0.00 3.34
2441 3972 2.029970 ACCTAATTAATTGACACGCGCG 59.970 45.455 30.96 30.96 0.00 6.86
2443 3974 4.328983 ACTCACCTAATTAATTGACACGCG 59.671 41.667 11.05 3.53 0.00 6.01
2444 3975 5.796350 ACTCACCTAATTAATTGACACGC 57.204 39.130 11.05 0.00 0.00 5.34
2450 3981 9.736023 GCTGGAATTAACTCACCTAATTAATTG 57.264 33.333 11.05 0.00 38.18 2.32
2451 3982 8.621286 CGCTGGAATTAACTCACCTAATTAATT 58.379 33.333 5.89 5.89 39.85 1.40
2452 3983 7.773690 ACGCTGGAATTAACTCACCTAATTAAT 59.226 33.333 0.00 0.00 30.80 1.40
2453 3984 7.107542 ACGCTGGAATTAACTCACCTAATTAA 58.892 34.615 0.00 0.00 30.80 1.40
2456 3987 5.099042 ACGCTGGAATTAACTCACCTAAT 57.901 39.130 0.00 0.00 0.00 1.73
2457 3988 4.546829 ACGCTGGAATTAACTCACCTAA 57.453 40.909 0.00 0.00 0.00 2.69
2459 3990 3.418684 AACGCTGGAATTAACTCACCT 57.581 42.857 0.00 0.00 0.00 4.00
2460 3991 3.424433 CGAAACGCTGGAATTAACTCACC 60.424 47.826 0.00 0.00 0.00 4.02
2461 3992 3.430895 TCGAAACGCTGGAATTAACTCAC 59.569 43.478 0.00 0.00 0.00 3.51
2462 3993 3.655486 TCGAAACGCTGGAATTAACTCA 58.345 40.909 0.00 0.00 0.00 3.41
2463 3994 4.657075 TTCGAAACGCTGGAATTAACTC 57.343 40.909 0.00 0.00 0.00 3.01
2464 3995 4.671766 GCATTCGAAACGCTGGAATTAACT 60.672 41.667 13.92 0.00 0.00 2.24
2466 3997 3.189495 TGCATTCGAAACGCTGGAATTAA 59.811 39.130 19.78 0.00 0.00 1.40
2467 3998 2.744741 TGCATTCGAAACGCTGGAATTA 59.255 40.909 19.78 0.12 0.00 1.40
2469 4000 1.164411 TGCATTCGAAACGCTGGAAT 58.836 45.000 19.78 0.00 0.00 3.01
2470 4001 0.947960 TTGCATTCGAAACGCTGGAA 59.052 45.000 19.78 10.92 0.00 3.53
2471 4002 1.135717 CATTGCATTCGAAACGCTGGA 60.136 47.619 19.78 5.66 0.00 3.86
2472 4003 1.261989 CATTGCATTCGAAACGCTGG 58.738 50.000 19.78 8.71 0.00 4.85
2473 4004 1.906966 GACATTGCATTCGAAACGCTG 59.093 47.619 19.78 14.32 0.00 5.18
2474 4005 1.464023 CGACATTGCATTCGAAACGCT 60.464 47.619 19.78 3.92 37.43 5.07
2475 4006 0.900547 CGACATTGCATTCGAAACGC 59.099 50.000 14.23 14.23 37.43 4.84
2476 4007 2.502280 TCGACATTGCATTCGAAACG 57.498 45.000 0.00 0.00 41.16 3.60
2482 4013 6.251376 GGAGTTGTTAATTCGACATTGCATTC 59.749 38.462 0.00 0.00 0.00 2.67
2483 4014 6.092748 GGAGTTGTTAATTCGACATTGCATT 58.907 36.000 0.00 0.00 0.00 3.56
2484 4015 5.393027 GGGAGTTGTTAATTCGACATTGCAT 60.393 40.000 0.00 0.00 0.00 3.96
2485 4016 4.083003 GGGAGTTGTTAATTCGACATTGCA 60.083 41.667 0.00 0.00 0.00 4.08
2486 4017 4.412207 GGGAGTTGTTAATTCGACATTGC 58.588 43.478 0.00 0.00 0.00 3.56
2487 4018 4.153475 ACGGGAGTTGTTAATTCGACATTG 59.847 41.667 0.00 0.00 43.33 2.82
2488 4019 4.153475 CACGGGAGTTGTTAATTCGACATT 59.847 41.667 0.00 0.00 44.67 2.71
2489 4020 3.682858 CACGGGAGTTGTTAATTCGACAT 59.317 43.478 0.00 0.00 44.67 3.06
2490 4021 3.061322 CACGGGAGTTGTTAATTCGACA 58.939 45.455 0.00 0.00 44.67 4.35
2493 4024 4.939509 ATTCACGGGAGTTGTTAATTCG 57.060 40.909 0.00 0.00 44.67 3.34
2494 4025 4.857037 GCAATTCACGGGAGTTGTTAATTC 59.143 41.667 22.04 2.90 44.67 2.17
2496 4027 4.079253 AGCAATTCACGGGAGTTGTTAAT 58.921 39.130 22.04 5.69 44.67 1.40
2497 4028 3.482436 AGCAATTCACGGGAGTTGTTAA 58.518 40.909 22.04 0.00 44.67 2.01
2498 4029 3.071479 GAGCAATTCACGGGAGTTGTTA 58.929 45.455 22.04 0.00 44.67 2.41
2499 4030 1.880027 GAGCAATTCACGGGAGTTGTT 59.120 47.619 22.04 17.39 44.67 2.83
2502 4033 1.523758 GTGAGCAATTCACGGGAGTT 58.476 50.000 0.00 0.00 46.13 3.01
2510 4041 1.507630 GCCGCATGTGAGCAATTCA 59.492 52.632 8.11 0.00 0.00 2.57
2511 4042 1.226773 GGCCGCATGTGAGCAATTC 60.227 57.895 8.11 0.00 0.00 2.17
2512 4043 1.252904 AAGGCCGCATGTGAGCAATT 61.253 50.000 8.11 5.85 0.00 2.32
2513 4044 1.679977 AAGGCCGCATGTGAGCAAT 60.680 52.632 8.11 0.00 0.00 3.56
2515 4046 2.462125 TACAAGGCCGCATGTGAGCA 62.462 55.000 18.46 0.09 0.00 4.26
2516 4047 1.305219 TTACAAGGCCGCATGTGAGC 61.305 55.000 18.46 9.40 0.00 4.26
2517 4048 1.164411 TTTACAAGGCCGCATGTGAG 58.836 50.000 18.46 0.00 0.00 3.51
2519 4050 2.538737 CGTATTTACAAGGCCGCATGTG 60.539 50.000 18.46 0.00 0.00 3.21
2520 4051 1.668751 CGTATTTACAAGGCCGCATGT 59.331 47.619 14.81 14.81 0.00 3.21
2521 4052 1.002900 CCGTATTTACAAGGCCGCATG 60.003 52.381 0.00 0.07 0.00 4.06
2522 4053 1.134340 TCCGTATTTACAAGGCCGCAT 60.134 47.619 0.00 0.00 0.00 4.73
2524 4055 0.654160 GTCCGTATTTACAAGGCCGC 59.346 55.000 0.00 0.00 0.00 6.53
2525 4056 0.925466 CGTCCGTATTTACAAGGCCG 59.075 55.000 0.00 0.00 0.00 6.13
2527 4058 1.648504 AGCGTCCGTATTTACAAGGC 58.351 50.000 0.00 0.00 0.00 4.35
2528 4059 4.208460 CACATAGCGTCCGTATTTACAAGG 59.792 45.833 0.00 0.00 0.00 3.61
2529 4060 4.208460 CCACATAGCGTCCGTATTTACAAG 59.792 45.833 0.00 0.00 0.00 3.16
2530 4061 4.114073 CCACATAGCGTCCGTATTTACAA 58.886 43.478 0.00 0.00 0.00 2.41
2531 4062 3.130869 ACCACATAGCGTCCGTATTTACA 59.869 43.478 0.00 0.00 0.00 2.41
2532 4063 3.488310 CACCACATAGCGTCCGTATTTAC 59.512 47.826 0.00 0.00 0.00 2.01
2533 4064 3.491276 CCACCACATAGCGTCCGTATTTA 60.491 47.826 0.00 0.00 0.00 1.40
2534 4065 2.546778 CACCACATAGCGTCCGTATTT 58.453 47.619 0.00 0.00 0.00 1.40
2535 4066 1.202486 CCACCACATAGCGTCCGTATT 60.202 52.381 0.00 0.00 0.00 1.89
2536 4067 0.387929 CCACCACATAGCGTCCGTAT 59.612 55.000 0.00 0.00 0.00 3.06
2537 4068 1.811195 CCACCACATAGCGTCCGTA 59.189 57.895 0.00 0.00 0.00 4.02
2538 4069 2.577059 CCACCACATAGCGTCCGT 59.423 61.111 0.00 0.00 0.00 4.69
2539 4070 2.890474 GCCACCACATAGCGTCCG 60.890 66.667 0.00 0.00 0.00 4.79
2541 4072 1.878522 CGAGCCACCACATAGCGTC 60.879 63.158 0.00 0.00 0.00 5.19
2542 4073 2.184322 CGAGCCACCACATAGCGT 59.816 61.111 0.00 0.00 0.00 5.07
2544 4075 2.203070 CCCGAGCCACCACATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2546 4077 1.906105 GAACCCCGAGCCACCACATA 61.906 60.000 0.00 0.00 0.00 2.29
2548 4079 3.948719 GAACCCCGAGCCACCACA 61.949 66.667 0.00 0.00 0.00 4.17
2549 4080 1.623542 ATAGAACCCCGAGCCACCAC 61.624 60.000 0.00 0.00 0.00 4.16
2551 4082 1.125633 TTATAGAACCCCGAGCCACC 58.874 55.000 0.00 0.00 0.00 4.61
2552 4083 2.994186 TTTATAGAACCCCGAGCCAC 57.006 50.000 0.00 0.00 0.00 5.01
2554 4085 2.612221 CGGATTTATAGAACCCCGAGCC 60.612 54.545 3.93 0.00 39.31 4.70
2555 4086 2.612221 CCGGATTTATAGAACCCCGAGC 60.612 54.545 0.00 0.00 39.31 5.03
2556 4087 2.895404 TCCGGATTTATAGAACCCCGAG 59.105 50.000 0.00 2.71 39.31 4.63
2559 4090 2.289257 CCGTCCGGATTTATAGAACCCC 60.289 54.545 7.81 0.00 37.50 4.95
2560 4091 2.629617 TCCGTCCGGATTTATAGAACCC 59.370 50.000 7.81 0.00 39.76 4.11
2572 4103 1.812686 CTCAAACCAGTCCGTCCGGA 61.813 60.000 0.00 0.00 42.90 5.14
2573 4104 1.374252 CTCAAACCAGTCCGTCCGG 60.374 63.158 0.00 0.00 0.00 5.14
2574 4105 1.374252 CCTCAAACCAGTCCGTCCG 60.374 63.158 0.00 0.00 0.00 4.79
2575 4106 0.037232 CTCCTCAAACCAGTCCGTCC 60.037 60.000 0.00 0.00 0.00 4.79
2576 4107 0.670854 GCTCCTCAAACCAGTCCGTC 60.671 60.000 0.00 0.00 0.00 4.79
2577 4108 1.371558 GCTCCTCAAACCAGTCCGT 59.628 57.895 0.00 0.00 0.00 4.69
2578 4109 1.376037 GGCTCCTCAAACCAGTCCG 60.376 63.158 0.00 0.00 0.00 4.79
2579 4110 1.276622 TAGGCTCCTCAAACCAGTCC 58.723 55.000 0.00 0.00 0.00 3.85
2580 4111 2.501723 TCATAGGCTCCTCAAACCAGTC 59.498 50.000 0.00 0.00 0.00 3.51
2581 4112 2.503356 CTCATAGGCTCCTCAAACCAGT 59.497 50.000 0.00 0.00 0.00 4.00
2582 4113 2.158842 CCTCATAGGCTCCTCAAACCAG 60.159 54.545 0.00 0.00 0.00 4.00
2583 4114 1.839994 CCTCATAGGCTCCTCAAACCA 59.160 52.381 0.00 0.00 0.00 3.67
2584 4115 1.141858 CCCTCATAGGCTCCTCAAACC 59.858 57.143 0.00 0.00 32.73 3.27
2585 4116 2.119495 TCCCTCATAGGCTCCTCAAAC 58.881 52.381 0.00 0.00 32.73 2.93
2586 4117 2.568546 TCCCTCATAGGCTCCTCAAA 57.431 50.000 0.00 0.00 32.73 2.69
2587 4118 2.803285 ATCCCTCATAGGCTCCTCAA 57.197 50.000 0.00 0.00 32.73 3.02
2588 4119 2.724672 AGTATCCCTCATAGGCTCCTCA 59.275 50.000 0.00 0.00 32.73 3.86
2589 4120 3.096092 CAGTATCCCTCATAGGCTCCTC 58.904 54.545 0.00 0.00 32.73 3.71
2590 4121 2.452823 ACAGTATCCCTCATAGGCTCCT 59.547 50.000 0.00 0.00 32.73 3.69
2591 4122 2.896039 ACAGTATCCCTCATAGGCTCC 58.104 52.381 0.00 0.00 32.73 4.70
2592 4123 3.898123 TGAACAGTATCCCTCATAGGCTC 59.102 47.826 0.00 0.00 32.73 4.70
2593 4124 3.928754 TGAACAGTATCCCTCATAGGCT 58.071 45.455 0.00 0.00 32.73 4.58
2594 4125 4.899352 ATGAACAGTATCCCTCATAGGC 57.101 45.455 0.00 0.00 32.73 3.93
2595 4126 7.967908 AGTAAATGAACAGTATCCCTCATAGG 58.032 38.462 0.00 0.00 34.30 2.57
2598 4129 9.784531 CATAAGTAAATGAACAGTATCCCTCAT 57.215 33.333 0.00 0.00 0.00 2.90
2599 4130 8.210946 CCATAAGTAAATGAACAGTATCCCTCA 58.789 37.037 0.00 0.00 0.00 3.86
2600 4131 8.429641 TCCATAAGTAAATGAACAGTATCCCTC 58.570 37.037 0.00 0.00 0.00 4.30
2601 4132 8.331931 TCCATAAGTAAATGAACAGTATCCCT 57.668 34.615 0.00 0.00 0.00 4.20
2602 4133 8.974060 TTCCATAAGTAAATGAACAGTATCCC 57.026 34.615 0.00 0.00 0.00 3.85
2608 4139 9.626045 GGACTTTTTCCATAAGTAAATGAACAG 57.374 33.333 0.00 0.00 45.10 3.16



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.