Multiple sequence alignment - TraesCS1D01G336900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G336900 chr1D 100.000 3142 0 0 1 3142 426871633 426868492 0.000000e+00 5803.0
1 TraesCS1D01G336900 chr1D 93.311 299 17 2 2545 2843 41238989 41238694 3.720000e-119 438.0
2 TraesCS1D01G336900 chr1D 95.266 169 7 1 2386 2553 426760163 426759995 1.860000e-67 267.0
3 TraesCS1D01G336900 chr1D 79.638 221 32 10 1 210 300031871 300032089 2.530000e-31 147.0
4 TraesCS1D01G336900 chr1D 88.333 60 7 0 1691 1750 415141399 415141340 4.350000e-09 73.1
5 TraesCS1D01G336900 chr1A 94.658 2340 86 16 226 2553 521879092 521876780 0.000000e+00 3592.0
6 TraesCS1D01G336900 chr1A 91.429 210 17 1 1 209 521879571 521879362 1.430000e-73 287.0
7 TraesCS1D01G336900 chr1A 93.023 172 8 2 2386 2553 521872594 521872423 6.730000e-62 248.0
8 TraesCS1D01G336900 chr1B 95.601 2205 68 9 360 2553 576689206 576687020 0.000000e+00 3507.0
9 TraesCS1D01G336900 chr5D 97.368 304 8 0 2839 3142 475188246 475187943 4.650000e-143 518.0
10 TraesCS1D01G336900 chr5D 94.898 294 13 1 2549 2842 508089508 508089799 2.860000e-125 459.0
11 TraesCS1D01G336900 chr5D 94.863 292 12 2 2551 2842 549921271 549921559 1.330000e-123 453.0
12 TraesCS1D01G336900 chr5D 79.439 214 37 5 1 208 566071806 566072018 9.080000e-31 145.0
13 TraesCS1D01G336900 chr3D 97.368 304 8 0 2839 3142 403108471 403108774 4.650000e-143 518.0
14 TraesCS1D01G336900 chr3D 95.410 305 11 3 2840 3142 8887590 8887287 1.690000e-132 483.0
15 TraesCS1D01G336900 chr3D 95.804 286 9 2 2555 2840 1267541 1267823 2.860000e-125 459.0
16 TraesCS1D01G336900 chr3D 83.387 313 37 11 1441 1750 404441664 404441364 3.090000e-70 276.0
17 TraesCS1D01G336900 chr6A 97.351 302 7 1 2842 3142 519224784 519225085 2.160000e-141 512.0
18 TraesCS1D01G336900 chr6A 95.410 305 13 1 2839 3142 604629737 604630041 4.710000e-133 484.0
19 TraesCS1D01G336900 chr2D 96.382 304 10 1 2840 3142 607026246 607025943 1.680000e-137 499.0
20 TraesCS1D01G336900 chr2D 95.302 298 10 2 2551 2848 164992260 164992553 1.320000e-128 470.0
21 TraesCS1D01G336900 chr2D 95.804 286 10 1 2555 2840 469114980 469115263 7.940000e-126 460.0
22 TraesCS1D01G336900 chr2D 79.724 217 34 5 1 207 80447869 80447653 7.020000e-32 148.0
23 TraesCS1D01G336900 chr6D 95.752 306 12 1 2838 3142 60541085 60541390 2.820000e-135 492.0
24 TraesCS1D01G336900 chr5B 95.425 306 12 1 2839 3142 349357332 349357027 1.310000e-133 486.0
25 TraesCS1D01G336900 chr2A 94.805 308 15 1 2836 3142 775379911 775380218 2.190000e-131 479.0
26 TraesCS1D01G336900 chr2A 84.286 140 15 3 72 208 543310813 543310678 2.540000e-26 130.0
27 TraesCS1D01G336900 chr7D 95.804 286 10 1 2555 2840 254193871 254194154 7.940000e-126 460.0
28 TraesCS1D01G336900 chr7D 95.502 289 9 3 2555 2843 530408357 530408073 2.860000e-125 459.0
29 TraesCS1D01G336900 chr7D 79.724 217 35 5 1 208 364412504 364412720 7.020000e-32 148.0
30 TraesCS1D01G336900 chr4A 93.377 302 14 3 2549 2847 575178463 575178761 2.880000e-120 442.0
31 TraesCS1D01G336900 chr3A 82.428 313 40 11 1441 1750 526865056 526864756 3.110000e-65 259.0
32 TraesCS1D01G336900 chr3B 82.109 313 41 10 1441 1750 530610882 530610582 1.450000e-63 254.0
33 TraesCS1D01G336900 chr7B 84.848 165 21 1 48 208 201270519 201270355 2.510000e-36 163.0
34 TraesCS1D01G336900 chr7A 79.358 218 34 7 1 208 594412231 594412015 3.270000e-30 143.0
35 TraesCS1D01G336900 chrUn 75.926 216 41 6 3 208 28618940 28618726 1.990000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G336900 chr1D 426868492 426871633 3141 True 5803.0 5803 100.0000 1 3142 1 chr1D.!!$R4 3141
1 TraesCS1D01G336900 chr1A 521876780 521879571 2791 True 1939.5 3592 93.0435 1 2553 2 chr1A.!!$R2 2552
2 TraesCS1D01G336900 chr1B 576687020 576689206 2186 True 3507.0 3507 95.6010 360 2553 1 chr1B.!!$R1 2193

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
214 216 0.246910 TCGGCGCTGGTTGTATACAA 59.753 50.0 17.88 14.35 0.00 2.41 F
248 503 0.468226 ACACAACATGTCCGGACTGT 59.532 50.0 33.39 28.54 36.54 3.55 F
277 532 0.526954 AGTTTAGACGTATGCGGGCG 60.527 55.0 8.39 0.00 43.45 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1351 1621 3.394836 GGAGGCCTTGGAGAGCGT 61.395 66.667 6.77 0.0 0.00 5.07 R
1767 2041 4.854924 CGCCGGTGCATGGGATGA 62.855 66.667 0.00 0.0 37.32 2.92 R
2460 2741 0.676782 GCTAGTGAACCGGCCAATGT 60.677 55.000 0.00 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 4.861210 ACAACATGGCGTTCGAAAATAAA 58.139 34.783 0.00 0.00 34.86 1.40
94 95 3.264947 GGTATTTGACCGAACACCTACC 58.735 50.000 0.00 0.00 38.87 3.18
99 100 4.807039 CCGAACACCTACCGGGCG 62.807 72.222 6.32 0.00 39.59 6.13
120 121 4.429212 TGACCGCCATGGACGACG 62.429 66.667 24.22 14.67 42.00 5.12
163 165 1.770749 TACAGACGGGTTTGGGGTGG 61.771 60.000 0.00 0.00 0.00 4.61
191 193 2.643551 CATCATAAAAGGCGAGTGGGT 58.356 47.619 0.00 0.00 0.00 4.51
210 212 2.508439 CGTCGGCGCTGGTTGTAT 60.508 61.111 17.88 0.00 0.00 2.29
212 214 1.477030 CGTCGGCGCTGGTTGTATAC 61.477 60.000 17.88 4.00 0.00 1.47
213 215 0.458889 GTCGGCGCTGGTTGTATACA 60.459 55.000 17.88 0.08 0.00 2.29
214 216 0.246910 TCGGCGCTGGTTGTATACAA 59.753 50.000 17.88 14.35 0.00 2.41
215 217 1.080298 CGGCGCTGGTTGTATACAAA 58.920 50.000 19.63 4.91 37.63 2.83
217 219 2.081462 GGCGCTGGTTGTATACAAACT 58.919 47.619 28.91 0.00 43.65 2.66
218 220 2.486592 GGCGCTGGTTGTATACAAACTT 59.513 45.455 28.91 0.00 43.65 2.66
219 221 3.488489 GCGCTGGTTGTATACAAACTTG 58.512 45.455 28.91 22.48 43.65 3.16
220 222 3.488489 CGCTGGTTGTATACAAACTTGC 58.512 45.455 28.91 27.84 43.65 4.01
221 223 3.488489 GCTGGTTGTATACAAACTTGCG 58.512 45.455 28.91 17.44 43.65 4.85
222 224 3.058501 GCTGGTTGTATACAAACTTGCGT 60.059 43.478 28.91 0.00 43.65 5.24
223 225 4.555906 GCTGGTTGTATACAAACTTGCGTT 60.556 41.667 28.91 0.00 43.65 4.84
224 226 4.849883 TGGTTGTATACAAACTTGCGTTG 58.150 39.130 28.91 0.00 43.65 4.10
248 503 0.468226 ACACAACATGTCCGGACTGT 59.532 50.000 33.39 28.54 36.54 3.55
250 505 2.066262 CACAACATGTCCGGACTGTAC 58.934 52.381 33.39 9.84 0.00 2.90
253 508 1.471119 ACATGTCCGGACTGTACGAT 58.529 50.000 33.39 16.00 0.00 3.73
254 509 1.822990 ACATGTCCGGACTGTACGATT 59.177 47.619 33.39 10.59 0.00 3.34
255 510 2.232941 ACATGTCCGGACTGTACGATTT 59.767 45.455 33.39 9.49 0.00 2.17
256 511 2.357327 TGTCCGGACTGTACGATTTG 57.643 50.000 33.39 0.00 0.00 2.32
257 512 1.067425 TGTCCGGACTGTACGATTTGG 60.067 52.381 33.39 0.00 0.00 3.28
258 513 1.203052 GTCCGGACTGTACGATTTGGA 59.797 52.381 27.64 0.00 0.00 3.53
259 514 1.475280 TCCGGACTGTACGATTTGGAG 59.525 52.381 15.21 0.00 0.00 3.86
266 521 5.575995 GGACTGTACGATTTGGAGTTTAGAC 59.424 44.000 0.00 0.00 0.00 2.59
277 532 0.526954 AGTTTAGACGTATGCGGGCG 60.527 55.000 8.39 0.00 43.45 6.13
285 540 2.124901 TATGCGGGCGGTTTGAGG 60.125 61.111 0.00 0.00 0.00 3.86
286 541 3.690685 TATGCGGGCGGTTTGAGGG 62.691 63.158 0.00 0.00 0.00 4.30
289 544 3.053896 CGGGCGGTTTGAGGGTTC 61.054 66.667 0.00 0.00 0.00 3.62
328 584 6.269307 CCTAACCGGGAATAGGAATAGAAAGA 59.731 42.308 19.98 0.00 41.03 2.52
351 607 4.366267 AGAAGAAGATAGGAAGCCCTTGA 58.634 43.478 0.00 0.00 40.78 3.02
353 609 2.432510 AGAAGATAGGAAGCCCTTGACG 59.567 50.000 0.00 0.00 40.78 4.35
394 650 4.342772 CACGAGTTGGAAAAGAAACACAG 58.657 43.478 0.00 0.00 0.00 3.66
395 651 3.377172 ACGAGTTGGAAAAGAAACACAGG 59.623 43.478 0.00 0.00 0.00 4.00
557 813 2.046314 ACGCCCGGGATTCAGTTG 60.046 61.111 29.31 4.73 0.00 3.16
679 935 2.092646 CGTTGTCCATTCCCTCCCATTA 60.093 50.000 0.00 0.00 0.00 1.90
765 1021 4.954970 CAACCGCCACTGCCACCT 62.955 66.667 0.00 0.00 0.00 4.00
766 1022 4.643387 AACCGCCACTGCCACCTC 62.643 66.667 0.00 0.00 0.00 3.85
770 1026 4.008933 GCCACTGCCACCTCGAGT 62.009 66.667 12.31 0.00 0.00 4.18
856 1122 2.659063 CCCATCTCCCACTCGTGCA 61.659 63.158 0.00 0.00 0.00 4.57
902 1168 1.156736 AGTGCGCCACTGTTACAATC 58.843 50.000 4.18 0.00 43.63 2.67
930 1200 0.887387 TTGTACGGCCCTGCTTGTTC 60.887 55.000 0.00 0.00 0.00 3.18
1051 1321 2.172372 CAGATCACGCTGCTGAGGC 61.172 63.158 0.00 0.00 39.26 4.70
1767 2041 1.279271 GTACACACATTCCCTCAGGCT 59.721 52.381 0.00 0.00 0.00 4.58
1835 2113 4.351192 GGCAGCAGGAACAATAATTAACG 58.649 43.478 0.00 0.00 0.00 3.18
1842 2120 5.907391 CAGGAACAATAATTAACGAATCGGC 59.093 40.000 7.80 0.00 0.00 5.54
2460 2741 2.115427 TGGATCCATGAACCGAGCTTA 58.885 47.619 11.44 0.00 0.00 3.09
2477 2758 2.937873 GCTTACATTGGCCGGTTCACTA 60.938 50.000 1.90 0.00 0.00 2.74
2553 2834 3.132646 ACACGTGTGGTCTGGTTACTAAA 59.867 43.478 22.71 0.00 34.19 1.85
2554 2835 4.121317 CACGTGTGGTCTGGTTACTAAAA 58.879 43.478 7.58 0.00 0.00 1.52
2555 2836 4.025480 CACGTGTGGTCTGGTTACTAAAAC 60.025 45.833 7.58 0.00 0.00 2.43
2556 2837 4.141869 ACGTGTGGTCTGGTTACTAAAACT 60.142 41.667 0.00 0.00 0.00 2.66
2557 2838 5.068987 ACGTGTGGTCTGGTTACTAAAACTA 59.931 40.000 0.00 0.00 0.00 2.24
2558 2839 5.403466 CGTGTGGTCTGGTTACTAAAACTAC 59.597 44.000 0.00 0.00 0.00 2.73
2559 2840 5.698089 GTGTGGTCTGGTTACTAAAACTACC 59.302 44.000 0.00 0.00 32.63 3.18
2560 2841 5.221702 TGTGGTCTGGTTACTAAAACTACCC 60.222 44.000 0.00 0.00 31.61 3.69
2561 2842 4.906664 TGGTCTGGTTACTAAAACTACCCA 59.093 41.667 0.00 0.00 31.61 4.51
2562 2843 5.548836 TGGTCTGGTTACTAAAACTACCCAT 59.451 40.000 0.00 0.00 31.61 4.00
2563 2844 6.730038 TGGTCTGGTTACTAAAACTACCCATA 59.270 38.462 0.00 0.00 31.61 2.74
2564 2845 7.237263 TGGTCTGGTTACTAAAACTACCCATAA 59.763 37.037 0.00 0.00 31.61 1.90
2565 2846 8.270030 GGTCTGGTTACTAAAACTACCCATAAT 58.730 37.037 0.00 0.00 0.00 1.28
2566 2847 9.106070 GTCTGGTTACTAAAACTACCCATAATG 57.894 37.037 0.00 0.00 0.00 1.90
2567 2848 9.049050 TCTGGTTACTAAAACTACCCATAATGA 57.951 33.333 0.00 0.00 0.00 2.57
2568 2849 9.326413 CTGGTTACTAAAACTACCCATAATGAG 57.674 37.037 0.00 0.00 0.00 2.90
2569 2850 9.049050 TGGTTACTAAAACTACCCATAATGAGA 57.951 33.333 0.00 0.00 0.00 3.27
2570 2851 9.543783 GGTTACTAAAACTACCCATAATGAGAG 57.456 37.037 0.00 0.00 0.00 3.20
2579 2860 8.423906 ACTACCCATAATGAGAGTAACATAGG 57.576 38.462 0.00 0.00 0.00 2.57
2580 2861 8.011290 ACTACCCATAATGAGAGTAACATAGGT 58.989 37.037 0.00 0.00 0.00 3.08
2581 2862 9.529823 CTACCCATAATGAGAGTAACATAGGTA 57.470 37.037 0.00 0.00 0.00 3.08
2582 2863 8.423906 ACCCATAATGAGAGTAACATAGGTAG 57.576 38.462 0.00 0.00 0.00 3.18
2583 2864 8.011290 ACCCATAATGAGAGTAACATAGGTAGT 58.989 37.037 0.00 0.00 0.00 2.73
2584 2865 9.529823 CCCATAATGAGAGTAACATAGGTAGTA 57.470 37.037 0.00 0.00 0.00 1.82
2590 2871 9.642343 ATGAGAGTAACATAGGTAGTAACATCA 57.358 33.333 0.00 0.00 0.00 3.07
2591 2872 8.900781 TGAGAGTAACATAGGTAGTAACATCAC 58.099 37.037 0.00 0.00 0.00 3.06
2592 2873 8.818622 AGAGTAACATAGGTAGTAACATCACA 57.181 34.615 0.00 0.00 0.00 3.58
2593 2874 9.422681 AGAGTAACATAGGTAGTAACATCACAT 57.577 33.333 0.00 0.00 0.00 3.21
2623 2904 9.716531 TCTAGATAAAATAGATGATGTGGCAAG 57.283 33.333 0.00 0.00 0.00 4.01
2624 2905 9.499479 CTAGATAAAATAGATGATGTGGCAAGT 57.501 33.333 0.00 0.00 0.00 3.16
2626 2907 9.851686 AGATAAAATAGATGATGTGGCAAGTAA 57.148 29.630 0.00 0.00 0.00 2.24
2633 2914 9.797642 ATAGATGATGTGGCAAGTAATAAATGA 57.202 29.630 0.00 0.00 0.00 2.57
2634 2915 8.523915 AGATGATGTGGCAAGTAATAAATGAA 57.476 30.769 0.00 0.00 0.00 2.57
2635 2916 8.627403 AGATGATGTGGCAAGTAATAAATGAAG 58.373 33.333 0.00 0.00 0.00 3.02
2636 2917 7.936496 TGATGTGGCAAGTAATAAATGAAGA 57.064 32.000 0.00 0.00 0.00 2.87
2637 2918 8.347004 TGATGTGGCAAGTAATAAATGAAGAA 57.653 30.769 0.00 0.00 0.00 2.52
2638 2919 8.801299 TGATGTGGCAAGTAATAAATGAAGAAA 58.199 29.630 0.00 0.00 0.00 2.52
2639 2920 9.294030 GATGTGGCAAGTAATAAATGAAGAAAG 57.706 33.333 0.00 0.00 0.00 2.62
2640 2921 8.402798 TGTGGCAAGTAATAAATGAAGAAAGA 57.597 30.769 0.00 0.00 0.00 2.52
2641 2922 8.514594 TGTGGCAAGTAATAAATGAAGAAAGAG 58.485 33.333 0.00 0.00 0.00 2.85
2642 2923 8.730680 GTGGCAAGTAATAAATGAAGAAAGAGA 58.269 33.333 0.00 0.00 0.00 3.10
2643 2924 8.950210 TGGCAAGTAATAAATGAAGAAAGAGAG 58.050 33.333 0.00 0.00 0.00 3.20
2644 2925 9.167311 GGCAAGTAATAAATGAAGAAAGAGAGA 57.833 33.333 0.00 0.00 0.00 3.10
2645 2926 9.980780 GCAAGTAATAAATGAAGAAAGAGAGAC 57.019 33.333 0.00 0.00 0.00 3.36
2651 2932 6.814506 AAATGAAGAAAGAGAGACATGTGG 57.185 37.500 1.15 0.00 0.00 4.17
2652 2933 4.963318 TGAAGAAAGAGAGACATGTGGT 57.037 40.909 1.15 0.00 0.00 4.16
2653 2934 6.611613 ATGAAGAAAGAGAGACATGTGGTA 57.388 37.500 1.15 0.00 0.00 3.25
2654 2935 6.419484 TGAAGAAAGAGAGACATGTGGTAA 57.581 37.500 1.15 0.00 0.00 2.85
2655 2936 6.223852 TGAAGAAAGAGAGACATGTGGTAAC 58.776 40.000 1.15 0.00 0.00 2.50
2691 2972 8.803397 ACTACTAGTATGAGTAACATCACACA 57.197 34.615 2.33 0.00 40.07 3.72
2692 2973 9.409918 ACTACTAGTATGAGTAACATCACACAT 57.590 33.333 2.33 0.00 40.07 3.21
2698 2979 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
2699 2980 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
2700 2981 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
2701 2982 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
2702 2983 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
2703 2984 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
2704 2985 4.847198 ACATCACACATATCAAGGCAAGA 58.153 39.130 0.00 0.00 0.00 3.02
2705 2986 5.443283 ACATCACACATATCAAGGCAAGAT 58.557 37.500 0.00 0.00 0.00 2.40
2706 2987 5.298527 ACATCACACATATCAAGGCAAGATG 59.701 40.000 0.00 0.00 36.24 2.90
2707 2988 5.101648 TCACACATATCAAGGCAAGATGA 57.898 39.130 2.43 0.00 0.00 2.92
2708 2989 5.121105 TCACACATATCAAGGCAAGATGAG 58.879 41.667 2.43 0.00 0.00 2.90
2709 2990 4.880120 CACACATATCAAGGCAAGATGAGT 59.120 41.667 2.43 0.00 0.00 3.41
2710 2991 5.007430 CACACATATCAAGGCAAGATGAGTC 59.993 44.000 2.43 0.00 0.00 3.36
2711 2992 5.104610 ACACATATCAAGGCAAGATGAGTCT 60.105 40.000 2.43 0.00 35.82 3.24
2712 2993 6.098838 ACACATATCAAGGCAAGATGAGTCTA 59.901 38.462 2.43 0.00 33.30 2.59
2713 2994 7.160049 CACATATCAAGGCAAGATGAGTCTAT 58.840 38.462 2.43 0.00 33.30 1.98
2714 2995 8.309656 CACATATCAAGGCAAGATGAGTCTATA 58.690 37.037 2.43 0.00 33.30 1.31
2715 2996 8.530311 ACATATCAAGGCAAGATGAGTCTATAG 58.470 37.037 0.00 0.00 33.30 1.31
2716 2997 6.992664 ATCAAGGCAAGATGAGTCTATAGT 57.007 37.500 0.00 0.00 33.30 2.12
2717 2998 6.398234 TCAAGGCAAGATGAGTCTATAGTC 57.602 41.667 0.00 0.00 33.30 2.59
2718 2999 6.132658 TCAAGGCAAGATGAGTCTATAGTCT 58.867 40.000 0.00 0.00 33.30 3.24
2719 3000 7.290813 TCAAGGCAAGATGAGTCTATAGTCTA 58.709 38.462 0.00 0.00 33.30 2.59
2720 3001 7.780271 TCAAGGCAAGATGAGTCTATAGTCTAA 59.220 37.037 0.00 0.00 33.30 2.10
2721 3002 8.584157 CAAGGCAAGATGAGTCTATAGTCTAAT 58.416 37.037 0.00 0.00 33.30 1.73
2722 3003 9.815306 AAGGCAAGATGAGTCTATAGTCTAATA 57.185 33.333 0.00 0.00 33.30 0.98
2723 3004 9.815306 AGGCAAGATGAGTCTATAGTCTAATAA 57.185 33.333 0.00 0.00 33.30 1.40
2739 3020 8.340618 AGTCTAATAAATGAAGTGTTGCATGT 57.659 30.769 0.00 0.00 0.00 3.21
2740 3021 8.796475 AGTCTAATAAATGAAGTGTTGCATGTT 58.204 29.630 0.00 0.00 0.00 2.71
2743 3024 9.289303 CTAATAAATGAAGTGTTGCATGTTACC 57.711 33.333 0.00 0.00 0.00 2.85
2744 3025 5.528043 AAATGAAGTGTTGCATGTTACCA 57.472 34.783 0.00 0.00 0.00 3.25
2745 3026 3.980646 TGAAGTGTTGCATGTTACCAC 57.019 42.857 0.00 0.00 0.00 4.16
2746 3027 3.282885 TGAAGTGTTGCATGTTACCACA 58.717 40.909 0.00 0.00 37.31 4.17
2747 3028 3.888323 TGAAGTGTTGCATGTTACCACAT 59.112 39.130 0.00 0.00 45.18 3.21
2748 3029 5.066593 TGAAGTGTTGCATGTTACCACATA 58.933 37.500 0.00 0.00 42.14 2.29
2749 3030 5.709631 TGAAGTGTTGCATGTTACCACATAT 59.290 36.000 0.00 0.00 42.14 1.78
2750 3031 6.881602 TGAAGTGTTGCATGTTACCACATATA 59.118 34.615 0.00 0.00 42.14 0.86
2751 3032 7.555914 TGAAGTGTTGCATGTTACCACATATAT 59.444 33.333 0.00 0.00 42.14 0.86
2752 3033 7.263100 AGTGTTGCATGTTACCACATATATG 57.737 36.000 11.29 11.29 42.14 1.78
2753 3034 6.828273 AGTGTTGCATGTTACCACATATATGT 59.172 34.615 12.75 12.75 42.14 2.29
2754 3035 7.339212 AGTGTTGCATGTTACCACATATATGTT 59.661 33.333 15.85 5.50 42.14 2.71
2755 3036 7.973388 GTGTTGCATGTTACCACATATATGTTT 59.027 33.333 15.85 8.57 42.14 2.83
2756 3037 8.526978 TGTTGCATGTTACCACATATATGTTTT 58.473 29.630 15.85 8.22 42.14 2.43
2759 3040 9.402320 TGCATGTTACCACATATATGTTTTACT 57.598 29.630 15.85 0.10 42.14 2.24
2760 3041 9.878599 GCATGTTACCACATATATGTTTTACTC 57.121 33.333 15.85 6.27 42.14 2.59
2762 3043 8.967664 TGTTACCACATATATGTTTTACTCCC 57.032 34.615 15.85 1.10 39.39 4.30
2763 3044 7.994334 TGTTACCACATATATGTTTTACTCCCC 59.006 37.037 15.85 0.00 39.39 4.81
2764 3045 6.584471 ACCACATATATGTTTTACTCCCCA 57.416 37.500 15.85 0.00 39.39 4.96
2765 3046 6.362248 ACCACATATATGTTTTACTCCCCAC 58.638 40.000 15.85 0.00 39.39 4.61
2766 3047 6.159751 ACCACATATATGTTTTACTCCCCACT 59.840 38.462 15.85 0.00 39.39 4.00
2767 3048 7.348801 ACCACATATATGTTTTACTCCCCACTA 59.651 37.037 15.85 0.00 39.39 2.74
2768 3049 8.383175 CCACATATATGTTTTACTCCCCACTAT 58.617 37.037 15.85 0.00 39.39 2.12
2785 3066 6.797707 CCCACTATAGGGGTAGTAACATAGA 58.202 44.000 19.93 0.00 45.60 1.98
2786 3067 6.890814 CCCACTATAGGGGTAGTAACATAGAG 59.109 46.154 19.93 0.00 45.60 2.43
2787 3068 7.468496 CCACTATAGGGGTAGTAACATAGAGT 58.532 42.308 13.42 0.00 33.29 3.24
2788 3069 8.609483 CCACTATAGGGGTAGTAACATAGAGTA 58.391 40.741 13.42 0.00 33.29 2.59
2789 3070 9.669887 CACTATAGGGGTAGTAACATAGAGTAG 57.330 40.741 4.43 0.00 33.29 2.57
2790 3071 9.404077 ACTATAGGGGTAGTAACATAGAGTAGT 57.596 37.037 4.43 0.00 33.29 2.73
2794 3075 7.876371 AGGGGTAGTAACATAGAGTAGTAACA 58.124 38.462 0.00 0.00 0.00 2.41
2795 3076 8.509441 AGGGGTAGTAACATAGAGTAGTAACAT 58.491 37.037 0.00 0.00 0.00 2.71
2796 3077 8.574737 GGGGTAGTAACATAGAGTAGTAACATG 58.425 40.741 0.00 0.00 0.00 3.21
2797 3078 8.574737 GGGTAGTAACATAGAGTAGTAACATGG 58.425 40.741 0.00 0.00 0.00 3.66
2798 3079 8.574737 GGTAGTAACATAGAGTAGTAACATGGG 58.425 40.741 0.00 0.00 0.00 4.00
2799 3080 7.052142 AGTAACATAGAGTAGTAACATGGGC 57.948 40.000 0.00 0.00 0.00 5.36
2800 3081 5.950544 AACATAGAGTAGTAACATGGGCA 57.049 39.130 0.00 0.00 0.00 5.36
2801 3082 5.950544 ACATAGAGTAGTAACATGGGCAA 57.049 39.130 0.00 0.00 0.00 4.52
2802 3083 6.500589 ACATAGAGTAGTAACATGGGCAAT 57.499 37.500 0.00 0.00 0.00 3.56
2803 3084 6.291377 ACATAGAGTAGTAACATGGGCAATG 58.709 40.000 0.00 0.00 42.48 2.82
2816 3097 6.791887 CATGGGCAATGTTACTACTCTATG 57.208 41.667 0.00 0.00 0.00 2.23
2817 3098 5.950544 TGGGCAATGTTACTACTCTATGT 57.049 39.130 0.00 0.00 0.00 2.29
2818 3099 6.308015 TGGGCAATGTTACTACTCTATGTT 57.692 37.500 0.00 0.00 0.00 2.71
2819 3100 7.426606 TGGGCAATGTTACTACTCTATGTTA 57.573 36.000 0.00 0.00 0.00 2.41
2820 3101 7.270047 TGGGCAATGTTACTACTCTATGTTAC 58.730 38.462 0.00 0.00 0.00 2.50
2821 3102 7.125204 TGGGCAATGTTACTACTCTATGTTACT 59.875 37.037 0.00 0.00 0.00 2.24
2822 3103 8.636213 GGGCAATGTTACTACTCTATGTTACTA 58.364 37.037 0.00 0.00 0.00 1.82
2823 3104 9.460906 GGCAATGTTACTACTCTATGTTACTAC 57.539 37.037 0.00 0.00 0.00 2.73
2824 3105 9.460906 GCAATGTTACTACTCTATGTTACTACC 57.539 37.037 0.00 0.00 0.00 3.18
2825 3106 9.962783 CAATGTTACTACTCTATGTTACTACCC 57.037 37.037 0.00 0.00 0.00 3.69
2826 3107 9.705103 AATGTTACTACTCTATGTTACTACCCA 57.295 33.333 0.00 0.00 0.00 4.51
2827 3108 9.878737 ATGTTACTACTCTATGTTACTACCCAT 57.121 33.333 0.00 0.00 0.00 4.00
2828 3109 9.705103 TGTTACTACTCTATGTTACTACCCATT 57.295 33.333 0.00 0.00 0.00 3.16
2829 3110 9.962783 GTTACTACTCTATGTTACTACCCATTG 57.037 37.037 0.00 0.00 0.00 2.82
2830 3111 9.705103 TTACTACTCTATGTTACTACCCATTGT 57.295 33.333 0.00 0.00 0.00 2.71
2831 3112 8.008513 ACTACTCTATGTTACTACCCATTGTG 57.991 38.462 0.00 0.00 0.00 3.33
2832 3113 6.235231 ACTCTATGTTACTACCCATTGTGG 57.765 41.667 0.00 0.00 37.25 4.17
2833 3114 5.031066 TCTATGTTACTACCCATTGTGGC 57.969 43.478 0.00 0.00 35.79 5.01
2834 3115 4.719773 TCTATGTTACTACCCATTGTGGCT 59.280 41.667 0.00 0.00 35.79 4.75
2835 3116 5.900699 TCTATGTTACTACCCATTGTGGCTA 59.099 40.000 0.00 0.00 35.79 3.93
2836 3117 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
2837 3118 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
2838 3119 4.081309 TGTTACTACCCATTGTGGCTAGTC 60.081 45.833 7.13 0.00 35.79 2.59
2839 3120 2.834113 ACTACCCATTGTGGCTAGTCT 58.166 47.619 0.00 0.00 35.79 3.24
2840 3121 3.990369 ACTACCCATTGTGGCTAGTCTA 58.010 45.455 0.00 0.00 35.79 2.59
2841 3122 4.359105 ACTACCCATTGTGGCTAGTCTAA 58.641 43.478 0.00 0.00 35.79 2.10
2842 3123 3.914426 ACCCATTGTGGCTAGTCTAAG 57.086 47.619 0.00 0.00 35.79 2.18
2843 3124 3.450904 ACCCATTGTGGCTAGTCTAAGA 58.549 45.455 0.00 0.00 35.79 2.10
2844 3125 3.452627 ACCCATTGTGGCTAGTCTAAGAG 59.547 47.826 0.00 0.00 35.79 2.85
2845 3126 3.462021 CCATTGTGGCTAGTCTAAGAGC 58.538 50.000 0.00 0.00 38.00 4.09
2846 3127 3.118629 CCATTGTGGCTAGTCTAAGAGCA 60.119 47.826 0.00 0.00 40.64 4.26
2847 3128 4.444022 CCATTGTGGCTAGTCTAAGAGCAT 60.444 45.833 0.00 0.00 40.64 3.79
2848 3129 4.392921 TTGTGGCTAGTCTAAGAGCATC 57.607 45.455 0.00 0.00 40.64 3.91
2861 3142 1.377536 GAGCATCTCCAACAGAAGCC 58.622 55.000 0.00 0.00 45.47 4.35
2862 3143 0.034670 AGCATCTCCAACAGAAGCCC 60.035 55.000 0.00 0.00 45.47 5.19
2863 3144 0.322816 GCATCTCCAACAGAAGCCCA 60.323 55.000 0.00 0.00 39.54 5.36
2864 3145 1.887956 GCATCTCCAACAGAAGCCCAA 60.888 52.381 0.00 0.00 39.54 4.12
2865 3146 2.517959 CATCTCCAACAGAAGCCCAAA 58.482 47.619 0.00 0.00 33.62 3.28
2866 3147 2.746279 TCTCCAACAGAAGCCCAAAA 57.254 45.000 0.00 0.00 0.00 2.44
2867 3148 3.025322 TCTCCAACAGAAGCCCAAAAA 57.975 42.857 0.00 0.00 0.00 1.94
2882 3163 3.482765 AAAAACGGCGCGCTAAAAT 57.517 42.105 32.29 12.26 0.00 1.82
2883 3164 2.615489 AAAAACGGCGCGCTAAAATA 57.385 40.000 32.29 0.00 0.00 1.40
2884 3165 2.615489 AAAACGGCGCGCTAAAATAA 57.385 40.000 32.29 0.00 0.00 1.40
2885 3166 2.836479 AAACGGCGCGCTAAAATAAT 57.164 40.000 32.29 6.50 0.00 1.28
2886 3167 2.836479 AACGGCGCGCTAAAATAATT 57.164 40.000 32.29 10.56 0.00 1.40
2887 3168 2.836479 ACGGCGCGCTAAAATAATTT 57.164 40.000 32.29 0.00 0.00 1.82
2888 3169 3.139603 ACGGCGCGCTAAAATAATTTT 57.860 38.095 32.29 0.00 36.67 1.82
2889 3170 4.275838 ACGGCGCGCTAAAATAATTTTA 57.724 36.364 32.29 0.00 34.19 1.52
2890 3171 4.030366 ACGGCGCGCTAAAATAATTTTAC 58.970 39.130 32.29 7.64 34.19 2.01
2891 3172 4.029704 CGGCGCGCTAAAATAATTTTACA 58.970 39.130 32.29 0.00 34.19 2.41
2892 3173 4.144051 CGGCGCGCTAAAATAATTTTACAG 59.856 41.667 32.29 1.75 34.19 2.74
2893 3174 4.085772 GGCGCGCTAAAATAATTTTACAGC 60.086 41.667 32.29 2.98 34.19 4.40
2898 3179 7.892445 CGCTAAAATAATTTTACAGCGTCAT 57.108 32.000 19.11 0.00 43.93 3.06
2899 3180 8.322906 CGCTAAAATAATTTTACAGCGTCATT 57.677 30.769 19.11 0.00 43.93 2.57
2900 3181 8.794406 CGCTAAAATAATTTTACAGCGTCATTT 58.206 29.630 19.11 0.00 43.93 2.32
2913 3194 9.763465 TTACAGCGTCATTTTAGTAATTTTAGC 57.237 29.630 0.00 0.00 0.00 3.09
2914 3195 6.959311 ACAGCGTCATTTTAGTAATTTTAGCG 59.041 34.615 0.00 0.00 0.00 4.26
2915 3196 5.963586 AGCGTCATTTTAGTAATTTTAGCGC 59.036 36.000 0.00 0.00 39.04 5.92
2916 3197 5.109261 GCGTCATTTTAGTAATTTTAGCGCG 60.109 40.000 0.00 0.00 0.00 6.86
2917 3198 5.109261 CGTCATTTTAGTAATTTTAGCGCGC 60.109 40.000 26.66 26.66 0.00 6.86
2918 3199 5.170803 GTCATTTTAGTAATTTTAGCGCGCC 59.829 40.000 30.33 9.85 0.00 6.53
2919 3200 3.307339 TTTAGTAATTTTAGCGCGCCG 57.693 42.857 30.33 0.00 0.00 6.46
2920 3201 1.925229 TAGTAATTTTAGCGCGCCGT 58.075 45.000 30.33 13.66 0.00 5.68
2921 3202 0.372334 AGTAATTTTAGCGCGCCGTG 59.628 50.000 30.33 0.00 0.00 4.94
2922 3203 0.587985 GTAATTTTAGCGCGCCGTGG 60.588 55.000 30.33 0.00 0.00 4.94
2923 3204 2.312398 TAATTTTAGCGCGCCGTGGC 62.312 55.000 30.33 0.00 37.85 5.01
2933 3214 3.195698 GCCGTGGCCGATTCAGTC 61.196 66.667 0.00 0.00 35.63 3.51
2934 3215 2.511600 CCGTGGCCGATTCAGTCC 60.512 66.667 0.00 0.00 35.63 3.85
2935 3216 2.264480 CGTGGCCGATTCAGTCCA 59.736 61.111 0.00 0.00 35.63 4.02
2936 3217 1.811266 CGTGGCCGATTCAGTCCAG 60.811 63.158 0.00 0.00 35.63 3.86
2937 3218 2.109126 GTGGCCGATTCAGTCCAGC 61.109 63.158 0.00 0.00 0.00 4.85
2938 3219 2.268920 GGCCGATTCAGTCCAGCA 59.731 61.111 0.00 0.00 0.00 4.41
2939 3220 1.377202 GGCCGATTCAGTCCAGCAA 60.377 57.895 0.00 0.00 0.00 3.91
2940 3221 0.960364 GGCCGATTCAGTCCAGCAAA 60.960 55.000 0.00 0.00 0.00 3.68
2941 3222 0.449388 GCCGATTCAGTCCAGCAAAG 59.551 55.000 0.00 0.00 0.00 2.77
2942 3223 1.089920 CCGATTCAGTCCAGCAAAGG 58.910 55.000 0.00 0.00 0.00 3.11
2943 3224 0.449388 CGATTCAGTCCAGCAAAGGC 59.551 55.000 0.00 0.00 41.61 4.35
2944 3225 1.538047 GATTCAGTCCAGCAAAGGCA 58.462 50.000 0.00 0.00 44.61 4.75
2945 3226 1.200948 GATTCAGTCCAGCAAAGGCAC 59.799 52.381 0.00 0.00 44.61 5.01
2946 3227 0.106769 TTCAGTCCAGCAAAGGCACA 60.107 50.000 0.00 0.00 44.61 4.57
2947 3228 0.106769 TCAGTCCAGCAAAGGCACAA 60.107 50.000 0.00 0.00 44.61 3.33
2948 3229 0.746063 CAGTCCAGCAAAGGCACAAA 59.254 50.000 0.00 0.00 44.61 2.83
2949 3230 1.136695 CAGTCCAGCAAAGGCACAAAA 59.863 47.619 0.00 0.00 44.61 2.44
2950 3231 1.830477 AGTCCAGCAAAGGCACAAAAA 59.170 42.857 0.00 0.00 44.61 1.94
2951 3232 2.435437 AGTCCAGCAAAGGCACAAAAAT 59.565 40.909 0.00 0.00 44.61 1.82
2952 3233 3.640967 AGTCCAGCAAAGGCACAAAAATA 59.359 39.130 0.00 0.00 44.61 1.40
2953 3234 4.284234 AGTCCAGCAAAGGCACAAAAATAT 59.716 37.500 0.00 0.00 44.61 1.28
2954 3235 5.480073 AGTCCAGCAAAGGCACAAAAATATA 59.520 36.000 0.00 0.00 44.61 0.86
2955 3236 5.807011 GTCCAGCAAAGGCACAAAAATATAG 59.193 40.000 0.00 0.00 44.61 1.31
2956 3237 4.567959 CCAGCAAAGGCACAAAAATATAGC 59.432 41.667 0.00 0.00 44.61 2.97
2957 3238 4.266029 CAGCAAAGGCACAAAAATATAGCG 59.734 41.667 0.00 0.00 44.61 4.26
2958 3239 3.000222 GCAAAGGCACAAAAATATAGCGC 60.000 43.478 0.00 0.00 40.72 5.92
2959 3240 2.755836 AGGCACAAAAATATAGCGCG 57.244 45.000 0.00 0.00 0.00 6.86
2960 3241 1.120437 GGCACAAAAATATAGCGCGC 58.880 50.000 26.66 26.66 0.00 6.86
2961 3242 1.532921 GGCACAAAAATATAGCGCGCA 60.533 47.619 35.10 19.76 0.00 6.09
2962 3243 2.181205 GCACAAAAATATAGCGCGCAA 58.819 42.857 35.10 18.82 0.00 4.85
2963 3244 2.596419 GCACAAAAATATAGCGCGCAAA 59.404 40.909 35.10 21.70 0.00 3.68
2964 3245 3.301133 GCACAAAAATATAGCGCGCAAAG 60.301 43.478 35.10 13.80 0.00 2.77
2965 3246 3.240401 CACAAAAATATAGCGCGCAAAGG 59.760 43.478 35.10 14.11 0.00 3.11
2966 3247 3.127895 ACAAAAATATAGCGCGCAAAGGA 59.872 39.130 35.10 13.84 0.00 3.36
2967 3248 3.334272 AAAATATAGCGCGCAAAGGAC 57.666 42.857 35.10 0.72 0.00 3.85
2968 3249 1.948104 AATATAGCGCGCAAAGGACA 58.052 45.000 35.10 10.92 0.00 4.02
2969 3250 1.502231 ATATAGCGCGCAAAGGACAG 58.498 50.000 35.10 0.00 0.00 3.51
2970 3251 1.151777 TATAGCGCGCAAAGGACAGC 61.152 55.000 35.10 0.00 0.00 4.40
2976 3257 4.748679 GCAAAGGACAGCGCGCAG 62.749 66.667 35.10 28.90 0.00 5.18
2989 3270 3.248029 CGCAGCAGTCCAACAGAC 58.752 61.111 0.00 0.00 46.71 3.51
2999 3280 3.955771 GTCCAACAGACGCACTAAAAA 57.044 42.857 0.00 0.00 35.30 1.94
3027 3308 8.487313 AAAGCGTCACAAATATATCTACAACA 57.513 30.769 0.00 0.00 0.00 3.33
3028 3309 8.487313 AAGCGTCACAAATATATCTACAACAA 57.513 30.769 0.00 0.00 0.00 2.83
3029 3310 8.487313 AGCGTCACAAATATATCTACAACAAA 57.513 30.769 0.00 0.00 0.00 2.83
3030 3311 8.388103 AGCGTCACAAATATATCTACAACAAAC 58.612 33.333 0.00 0.00 0.00 2.93
3031 3312 8.172484 GCGTCACAAATATATCTACAACAAACA 58.828 33.333 0.00 0.00 0.00 2.83
3032 3313 9.689075 CGTCACAAATATATCTACAACAAACAG 57.311 33.333 0.00 0.00 0.00 3.16
3033 3314 9.988350 GTCACAAATATATCTACAACAAACAGG 57.012 33.333 0.00 0.00 0.00 4.00
3034 3315 9.733556 TCACAAATATATCTACAACAAACAGGT 57.266 29.630 0.00 0.00 0.00 4.00
3035 3316 9.988350 CACAAATATATCTACAACAAACAGGTC 57.012 33.333 0.00 0.00 0.00 3.85
3036 3317 9.174166 ACAAATATATCTACAACAAACAGGTCC 57.826 33.333 0.00 0.00 0.00 4.46
3037 3318 8.621286 CAAATATATCTACAACAAACAGGTCCC 58.379 37.037 0.00 0.00 0.00 4.46
3038 3319 7.691993 ATATATCTACAACAAACAGGTCCCT 57.308 36.000 0.00 0.00 0.00 4.20
3039 3320 8.792830 ATATATCTACAACAAACAGGTCCCTA 57.207 34.615 0.00 0.00 0.00 3.53
3040 3321 5.836024 ATCTACAACAAACAGGTCCCTAA 57.164 39.130 0.00 0.00 0.00 2.69
3041 3322 5.633655 TCTACAACAAACAGGTCCCTAAA 57.366 39.130 0.00 0.00 0.00 1.85
3042 3323 5.370679 TCTACAACAAACAGGTCCCTAAAC 58.629 41.667 0.00 0.00 0.00 2.01
3043 3324 3.970842 ACAACAAACAGGTCCCTAAACA 58.029 40.909 0.00 0.00 0.00 2.83
3044 3325 4.542697 ACAACAAACAGGTCCCTAAACAT 58.457 39.130 0.00 0.00 0.00 2.71
3045 3326 4.959839 ACAACAAACAGGTCCCTAAACATT 59.040 37.500 0.00 0.00 0.00 2.71
3046 3327 5.423931 ACAACAAACAGGTCCCTAAACATTT 59.576 36.000 0.00 0.00 0.00 2.32
3047 3328 6.608002 ACAACAAACAGGTCCCTAAACATTTA 59.392 34.615 0.00 0.00 0.00 1.40
3048 3329 6.644248 ACAAACAGGTCCCTAAACATTTAC 57.356 37.500 0.00 0.00 0.00 2.01
3049 3330 6.130569 ACAAACAGGTCCCTAAACATTTACA 58.869 36.000 0.00 0.00 0.00 2.41
3050 3331 6.608002 ACAAACAGGTCCCTAAACATTTACAA 59.392 34.615 0.00 0.00 0.00 2.41
3051 3332 7.124448 ACAAACAGGTCCCTAAACATTTACAAA 59.876 33.333 0.00 0.00 0.00 2.83
3052 3333 7.849322 AACAGGTCCCTAAACATTTACAAAT 57.151 32.000 0.00 0.00 0.00 2.32
3053 3334 8.943594 AACAGGTCCCTAAACATTTACAAATA 57.056 30.769 0.00 0.00 0.00 1.40
3054 3335 8.943594 ACAGGTCCCTAAACATTTACAAATAA 57.056 30.769 0.00 0.00 0.00 1.40
3055 3336 9.020731 ACAGGTCCCTAAACATTTACAAATAAG 57.979 33.333 0.00 0.00 0.00 1.73
3056 3337 9.020731 CAGGTCCCTAAACATTTACAAATAAGT 57.979 33.333 0.00 0.00 0.00 2.24
3057 3338 9.239551 AGGTCCCTAAACATTTACAAATAAGTC 57.760 33.333 0.00 0.00 0.00 3.01
3058 3339 8.464404 GGTCCCTAAACATTTACAAATAAGTCC 58.536 37.037 0.00 0.00 0.00 3.85
3059 3340 9.016438 GTCCCTAAACATTTACAAATAAGTCCA 57.984 33.333 0.00 0.00 0.00 4.02
3060 3341 9.762381 TCCCTAAACATTTACAAATAAGTCCAT 57.238 29.630 0.00 0.00 0.00 3.41
3067 3348 9.685276 ACATTTACAAATAAGTCCATCTGATCA 57.315 29.630 0.00 0.00 0.00 2.92
3072 3353 8.408043 ACAAATAAGTCCATCTGATCAAAACA 57.592 30.769 0.00 0.00 0.00 2.83
3073 3354 8.859090 ACAAATAAGTCCATCTGATCAAAACAA 58.141 29.630 0.00 0.00 0.00 2.83
3074 3355 9.695526 CAAATAAGTCCATCTGATCAAAACAAA 57.304 29.630 0.00 0.00 0.00 2.83
3077 3358 9.696917 ATAAGTCCATCTGATCAAAACAAAAAC 57.303 29.630 0.00 0.00 0.00 2.43
3078 3359 6.208644 AGTCCATCTGATCAAAACAAAAACG 58.791 36.000 0.00 0.00 0.00 3.60
3079 3360 4.981674 TCCATCTGATCAAAACAAAAACGC 59.018 37.500 0.00 0.00 0.00 4.84
3080 3361 4.744137 CCATCTGATCAAAACAAAAACGCA 59.256 37.500 0.00 0.00 0.00 5.24
3081 3362 5.233902 CCATCTGATCAAAACAAAAACGCAA 59.766 36.000 0.00 0.00 0.00 4.85
3082 3363 6.073657 CCATCTGATCAAAACAAAAACGCAAT 60.074 34.615 0.00 0.00 0.00 3.56
3083 3364 6.900568 TCTGATCAAAACAAAAACGCAATT 57.099 29.167 0.00 0.00 0.00 2.32
3084 3365 6.703857 TCTGATCAAAACAAAAACGCAATTG 58.296 32.000 0.00 0.00 0.00 2.32
3085 3366 5.804173 TGATCAAAACAAAAACGCAATTGG 58.196 33.333 7.72 0.00 0.00 3.16
3086 3367 4.606457 TCAAAACAAAAACGCAATTGGG 57.394 36.364 19.99 19.99 0.00 4.12
3087 3368 4.003648 TCAAAACAAAAACGCAATTGGGT 58.996 34.783 21.37 21.37 43.39 4.51
3088 3369 4.093556 TCAAAACAAAAACGCAATTGGGTC 59.906 37.500 26.19 0.00 40.50 4.46
3089 3370 2.232756 ACAAAAACGCAATTGGGTCC 57.767 45.000 26.19 0.00 40.50 4.46
3090 3371 1.202592 ACAAAAACGCAATTGGGTCCC 60.203 47.619 26.19 0.00 40.50 4.46
3091 3372 0.394938 AAAAACGCAATTGGGTCCCC 59.605 50.000 26.19 0.00 40.50 4.81
3092 3373 0.760945 AAAACGCAATTGGGTCCCCA 60.761 50.000 26.19 0.00 45.63 4.96
3111 3392 1.133790 CAATGGTTGGAGCAAGCTAGC 59.866 52.381 6.62 6.62 41.66 3.42
3113 3394 0.401738 TGGTTGGAGCAAGCTAGCTT 59.598 50.000 24.42 24.42 46.75 3.74
3121 3402 3.547567 CAAGCTAGCTTGCTGACCT 57.452 52.632 37.13 9.95 45.38 3.85
3122 3403 1.818642 CAAGCTAGCTTGCTGACCTT 58.181 50.000 37.13 9.20 45.38 3.50
3123 3404 1.467734 CAAGCTAGCTTGCTGACCTTG 59.532 52.381 37.13 17.17 45.38 3.61
3124 3405 0.676151 AGCTAGCTTGCTGACCTTGC 60.676 55.000 22.06 0.00 42.33 4.01
3125 3406 0.957395 GCTAGCTTGCTGACCTTGCA 60.957 55.000 13.17 0.00 38.80 4.08
3126 3407 1.527034 CTAGCTTGCTGACCTTGCAA 58.473 50.000 5.26 0.00 46.48 4.08
3132 3413 3.581024 TTGCTGACCTTGCAAATCATC 57.419 42.857 12.23 9.53 45.81 2.92
3133 3414 2.799017 TGCTGACCTTGCAAATCATCT 58.201 42.857 12.23 0.00 37.51 2.90
3134 3415 3.159472 TGCTGACCTTGCAAATCATCTT 58.841 40.909 12.23 0.00 37.51 2.40
3135 3416 3.192001 TGCTGACCTTGCAAATCATCTTC 59.808 43.478 12.23 5.02 37.51 2.87
3136 3417 3.428589 GCTGACCTTGCAAATCATCTTCC 60.429 47.826 12.23 0.00 0.00 3.46
3137 3418 2.749076 TGACCTTGCAAATCATCTTCCG 59.251 45.455 8.61 0.00 0.00 4.30
3138 3419 1.474077 ACCTTGCAAATCATCTTCCGC 59.526 47.619 0.00 0.00 0.00 5.54
3139 3420 1.202336 CCTTGCAAATCATCTTCCGCC 60.202 52.381 0.00 0.00 0.00 6.13
3140 3421 0.451383 TTGCAAATCATCTTCCGCCG 59.549 50.000 0.00 0.00 0.00 6.46
3141 3422 1.356624 GCAAATCATCTTCCGCCGG 59.643 57.895 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.592607 TGTTGTTTCTTAGAGTAAATAGCGGG 59.407 38.462 0.00 0.00 0.00 6.13
32 33 5.302360 ACGCCATGTTGTTTCTTAGAGTAA 58.698 37.500 0.00 0.00 0.00 2.24
99 100 2.746277 GTCCATGGCGGTCACCAC 60.746 66.667 6.96 0.00 44.17 4.16
120 121 1.153429 GTACACTCCCCATGCCGAC 60.153 63.158 0.00 0.00 0.00 4.79
127 128 0.616679 GTAGGCAGGTACACTCCCCA 60.617 60.000 0.00 0.00 0.00 4.96
163 165 1.065551 GCCTTTTATGATGGTGGCGTC 59.934 52.381 0.00 0.00 0.00 5.19
172 174 2.643551 CACCCACTCGCCTTTTATGAT 58.356 47.619 0.00 0.00 0.00 2.45
199 201 3.488489 GCAAGTTTGTATACAACCAGCG 58.512 45.455 17.85 7.22 35.28 5.18
217 219 1.383523 TGTTGTGTCATCCAACGCAA 58.616 45.000 0.00 0.00 44.86 4.85
218 220 1.266446 CATGTTGTGTCATCCAACGCA 59.734 47.619 0.00 0.00 44.00 5.24
219 221 1.266718 ACATGTTGTGTCATCCAACGC 59.733 47.619 0.00 0.00 44.00 4.84
248 503 5.745294 GCATACGTCTAAACTCCAAATCGTA 59.255 40.000 0.00 0.00 37.06 3.43
250 505 4.317139 CGCATACGTCTAAACTCCAAATCG 60.317 45.833 0.00 0.00 33.53 3.34
253 508 3.255725 CCGCATACGTCTAAACTCCAAA 58.744 45.455 0.00 0.00 37.70 3.28
254 509 2.417651 CCCGCATACGTCTAAACTCCAA 60.418 50.000 0.00 0.00 37.70 3.53
255 510 1.135527 CCCGCATACGTCTAAACTCCA 59.864 52.381 0.00 0.00 37.70 3.86
256 511 1.849097 CCCGCATACGTCTAAACTCC 58.151 55.000 0.00 0.00 37.70 3.85
257 512 1.206523 GCCCGCATACGTCTAAACTC 58.793 55.000 0.00 0.00 37.70 3.01
258 513 0.526954 CGCCCGCATACGTCTAAACT 60.527 55.000 0.00 0.00 37.70 2.66
259 514 1.485032 CCGCCCGCATACGTCTAAAC 61.485 60.000 0.00 0.00 37.70 2.01
266 521 2.808958 CTCAAACCGCCCGCATACG 61.809 63.158 0.00 0.00 39.67 3.06
277 532 1.176619 CCAACCCGAACCCTCAAACC 61.177 60.000 0.00 0.00 0.00 3.27
285 540 2.754254 GGCATCCCAACCCGAACC 60.754 66.667 0.00 0.00 0.00 3.62
286 541 2.754254 GGGCATCCCAACCCGAAC 60.754 66.667 0.00 0.00 44.65 3.95
328 584 4.785376 TCAAGGGCTTCCTATCTTCTTCTT 59.215 41.667 0.00 0.00 40.74 2.52
353 609 3.053455 GTGCTCATATACGAAGCCTGTC 58.947 50.000 0.00 0.00 0.00 3.51
394 650 1.670083 GTGTTCCTGTACGCACCCC 60.670 63.158 0.00 0.00 0.00 4.95
395 651 1.670083 GGTGTTCCTGTACGCACCC 60.670 63.158 10.35 0.00 43.96 4.61
679 935 2.236395 CGGGAATGTGGGTAGAGAAACT 59.764 50.000 0.00 0.00 0.00 2.66
766 1022 2.024871 GAGGTCGCCGATGACTCG 59.975 66.667 0.00 0.00 44.62 4.18
767 1023 2.065906 GAGGAGGTCGCCGATGACTC 62.066 65.000 7.58 7.58 38.91 3.36
768 1024 2.043852 AGGAGGTCGCCGATGACT 60.044 61.111 0.00 0.00 38.91 3.41
769 1025 2.413765 GAGGAGGTCGCCGATGAC 59.586 66.667 0.00 0.00 38.17 3.06
770 1026 2.833582 GGAGGAGGTCGCCGATGA 60.834 66.667 0.00 0.00 0.00 2.92
902 1168 1.356527 GGGCCGTACAAGCTACAACG 61.357 60.000 0.00 7.47 35.20 4.10
930 1200 2.106683 GCGACCAATCCCTGAACCG 61.107 63.158 0.00 0.00 0.00 4.44
1351 1621 3.394836 GGAGGCCTTGGAGAGCGT 61.395 66.667 6.77 0.00 0.00 5.07
1767 2041 4.854924 CGCCGGTGCATGGGATGA 62.855 66.667 0.00 0.00 37.32 2.92
2460 2741 0.676782 GCTAGTGAACCGGCCAATGT 60.677 55.000 0.00 0.00 0.00 2.71
2477 2758 0.944311 CACGTCAACTGTTAGCGGCT 60.944 55.000 7.98 7.98 0.00 5.52
2534 2815 4.374399 AGTTTTAGTAACCAGACCACACG 58.626 43.478 0.00 0.00 0.00 4.49
2553 2834 8.871125 CCTATGTTACTCTCATTATGGGTAGTT 58.129 37.037 3.34 0.00 0.00 2.24
2554 2835 8.011290 ACCTATGTTACTCTCATTATGGGTAGT 58.989 37.037 0.00 0.00 0.00 2.73
2555 2836 8.423906 ACCTATGTTACTCTCATTATGGGTAG 57.576 38.462 0.00 0.00 0.00 3.18
2556 2837 9.529823 CTACCTATGTTACTCTCATTATGGGTA 57.470 37.037 0.00 0.00 0.00 3.69
2557 2838 8.011290 ACTACCTATGTTACTCTCATTATGGGT 58.989 37.037 0.00 0.00 0.00 4.51
2558 2839 8.423906 ACTACCTATGTTACTCTCATTATGGG 57.576 38.462 0.00 0.00 0.00 4.00
2564 2845 9.642343 TGATGTTACTACCTATGTTACTCTCAT 57.358 33.333 0.00 0.00 0.00 2.90
2565 2846 8.900781 GTGATGTTACTACCTATGTTACTCTCA 58.099 37.037 0.00 0.00 0.00 3.27
2566 2847 8.900781 TGTGATGTTACTACCTATGTTACTCTC 58.099 37.037 0.00 0.00 0.00 3.20
2567 2848 8.818622 TGTGATGTTACTACCTATGTTACTCT 57.181 34.615 0.00 0.00 0.00 3.24
2597 2878 9.716531 CTTGCCACATCATCTATTTTATCTAGA 57.283 33.333 0.00 0.00 0.00 2.43
2598 2879 9.499479 ACTTGCCACATCATCTATTTTATCTAG 57.501 33.333 0.00 0.00 0.00 2.43
2600 2881 9.851686 TTACTTGCCACATCATCTATTTTATCT 57.148 29.630 0.00 0.00 0.00 1.98
2607 2888 9.797642 TCATTTATTACTTGCCACATCATCTAT 57.202 29.630 0.00 0.00 0.00 1.98
2608 2889 9.625747 TTCATTTATTACTTGCCACATCATCTA 57.374 29.630 0.00 0.00 0.00 1.98
2609 2890 8.523915 TTCATTTATTACTTGCCACATCATCT 57.476 30.769 0.00 0.00 0.00 2.90
2610 2891 8.623903 TCTTCATTTATTACTTGCCACATCATC 58.376 33.333 0.00 0.00 0.00 2.92
2611 2892 8.523915 TCTTCATTTATTACTTGCCACATCAT 57.476 30.769 0.00 0.00 0.00 2.45
2612 2893 7.936496 TCTTCATTTATTACTTGCCACATCA 57.064 32.000 0.00 0.00 0.00 3.07
2613 2894 9.294030 CTTTCTTCATTTATTACTTGCCACATC 57.706 33.333 0.00 0.00 0.00 3.06
2614 2895 9.023962 TCTTTCTTCATTTATTACTTGCCACAT 57.976 29.630 0.00 0.00 0.00 3.21
2615 2896 8.402798 TCTTTCTTCATTTATTACTTGCCACA 57.597 30.769 0.00 0.00 0.00 4.17
2616 2897 8.730680 TCTCTTTCTTCATTTATTACTTGCCAC 58.269 33.333 0.00 0.00 0.00 5.01
2617 2898 8.862325 TCTCTTTCTTCATTTATTACTTGCCA 57.138 30.769 0.00 0.00 0.00 4.92
2618 2899 9.167311 TCTCTCTTTCTTCATTTATTACTTGCC 57.833 33.333 0.00 0.00 0.00 4.52
2619 2900 9.980780 GTCTCTCTTTCTTCATTTATTACTTGC 57.019 33.333 0.00 0.00 0.00 4.01
2625 2906 8.954350 CCACATGTCTCTCTTTCTTCATTTATT 58.046 33.333 0.00 0.00 0.00 1.40
2626 2907 8.105829 ACCACATGTCTCTCTTTCTTCATTTAT 58.894 33.333 0.00 0.00 0.00 1.40
2627 2908 7.453393 ACCACATGTCTCTCTTTCTTCATTTA 58.547 34.615 0.00 0.00 0.00 1.40
2628 2909 6.302269 ACCACATGTCTCTCTTTCTTCATTT 58.698 36.000 0.00 0.00 0.00 2.32
2629 2910 5.874093 ACCACATGTCTCTCTTTCTTCATT 58.126 37.500 0.00 0.00 0.00 2.57
2630 2911 5.495926 ACCACATGTCTCTCTTTCTTCAT 57.504 39.130 0.00 0.00 0.00 2.57
2631 2912 4.963318 ACCACATGTCTCTCTTTCTTCA 57.037 40.909 0.00 0.00 0.00 3.02
2632 2913 6.223852 TGTTACCACATGTCTCTCTTTCTTC 58.776 40.000 0.00 0.00 0.00 2.87
2633 2914 6.174720 TGTTACCACATGTCTCTCTTTCTT 57.825 37.500 0.00 0.00 0.00 2.52
2634 2915 5.808366 TGTTACCACATGTCTCTCTTTCT 57.192 39.130 0.00 0.00 0.00 2.52
2635 2916 7.819900 AGTTATGTTACCACATGTCTCTCTTTC 59.180 37.037 0.00 0.00 43.92 2.62
2636 2917 7.680730 AGTTATGTTACCACATGTCTCTCTTT 58.319 34.615 0.00 0.00 43.92 2.52
2637 2918 7.246171 AGTTATGTTACCACATGTCTCTCTT 57.754 36.000 0.00 0.00 43.92 2.85
2638 2919 6.859112 AGTTATGTTACCACATGTCTCTCT 57.141 37.500 0.00 0.00 43.92 3.10
2639 2920 7.773149 ACTAGTTATGTTACCACATGTCTCTC 58.227 38.462 0.00 0.00 43.92 3.20
2640 2921 7.719871 ACTAGTTATGTTACCACATGTCTCT 57.280 36.000 0.00 0.00 43.92 3.10
2641 2922 9.298774 GTAACTAGTTATGTTACCACATGTCTC 57.701 37.037 18.03 0.00 43.92 3.36
2642 2923 9.032624 AGTAACTAGTTATGTTACCACATGTCT 57.967 33.333 18.03 3.19 46.31 3.41
2665 2946 9.895138 TGTGTGATGTTACTCATACTAGTAGTA 57.105 33.333 12.38 12.38 37.92 1.82
2666 2947 8.803397 TGTGTGATGTTACTCATACTAGTAGT 57.197 34.615 8.85 8.14 37.92 2.73
2672 2953 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
2673 2954 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
2674 2955 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
2675 2956 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
2676 2957 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
2677 2958 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
2678 2959 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
2679 2960 6.316140 TCTTGCCTTGATATGTGTGATGTTAC 59.684 38.462 0.00 0.00 0.00 2.50
2680 2961 6.413892 TCTTGCCTTGATATGTGTGATGTTA 58.586 36.000 0.00 0.00 0.00 2.41
2681 2962 5.255687 TCTTGCCTTGATATGTGTGATGTT 58.744 37.500 0.00 0.00 0.00 2.71
2682 2963 4.847198 TCTTGCCTTGATATGTGTGATGT 58.153 39.130 0.00 0.00 0.00 3.06
2683 2964 5.529800 TCATCTTGCCTTGATATGTGTGATG 59.470 40.000 0.00 0.00 0.00 3.07
2684 2965 5.687780 TCATCTTGCCTTGATATGTGTGAT 58.312 37.500 0.00 0.00 0.00 3.06
2685 2966 5.101648 TCATCTTGCCTTGATATGTGTGA 57.898 39.130 0.00 0.00 0.00 3.58
2686 2967 4.880120 ACTCATCTTGCCTTGATATGTGTG 59.120 41.667 0.00 0.00 0.00 3.82
2687 2968 5.104610 AGACTCATCTTGCCTTGATATGTGT 60.105 40.000 0.00 0.00 0.00 3.72
2688 2969 5.366460 AGACTCATCTTGCCTTGATATGTG 58.634 41.667 0.00 0.00 0.00 3.21
2689 2970 5.627182 AGACTCATCTTGCCTTGATATGT 57.373 39.130 0.00 0.00 0.00 2.29
2690 2971 8.530311 ACTATAGACTCATCTTGCCTTGATATG 58.470 37.037 6.78 0.00 36.29 1.78
2691 2972 8.663209 ACTATAGACTCATCTTGCCTTGATAT 57.337 34.615 6.78 0.00 36.29 1.63
2692 2973 7.947332 AGACTATAGACTCATCTTGCCTTGATA 59.053 37.037 6.78 0.00 36.29 2.15
2693 2974 6.782000 AGACTATAGACTCATCTTGCCTTGAT 59.218 38.462 6.78 0.00 36.29 2.57
2694 2975 6.132658 AGACTATAGACTCATCTTGCCTTGA 58.867 40.000 6.78 0.00 36.29 3.02
2695 2976 6.403866 AGACTATAGACTCATCTTGCCTTG 57.596 41.667 6.78 0.00 36.29 3.61
2696 2977 8.719645 ATTAGACTATAGACTCATCTTGCCTT 57.280 34.615 6.78 0.00 36.29 4.35
2697 2978 9.815306 TTATTAGACTATAGACTCATCTTGCCT 57.185 33.333 6.78 0.00 36.29 4.75
2713 2994 9.448438 ACATGCAACACTTCATTTATTAGACTA 57.552 29.630 0.00 0.00 0.00 2.59
2714 2995 8.340618 ACATGCAACACTTCATTTATTAGACT 57.659 30.769 0.00 0.00 0.00 3.24
2715 2996 8.970691 AACATGCAACACTTCATTTATTAGAC 57.029 30.769 0.00 0.00 0.00 2.59
2717 2998 9.289303 GGTAACATGCAACACTTCATTTATTAG 57.711 33.333 0.00 0.00 0.00 1.73
2718 2999 8.797438 TGGTAACATGCAACACTTCATTTATTA 58.203 29.630 0.00 0.00 46.17 0.98
2719 3000 7.665690 TGGTAACATGCAACACTTCATTTATT 58.334 30.769 0.00 0.00 46.17 1.40
2720 3001 7.225784 TGGTAACATGCAACACTTCATTTAT 57.774 32.000 0.00 0.00 46.17 1.40
2721 3002 6.641169 TGGTAACATGCAACACTTCATTTA 57.359 33.333 0.00 0.00 46.17 1.40
2722 3003 5.528043 TGGTAACATGCAACACTTCATTT 57.472 34.783 0.00 0.00 46.17 2.32
2738 3019 7.994334 TGGGGAGTAAAACATATATGTGGTAAC 59.006 37.037 18.94 13.90 41.61 2.50
2739 3020 7.994334 GTGGGGAGTAAAACATATATGTGGTAA 59.006 37.037 18.94 3.13 41.61 2.85
2740 3021 7.348801 AGTGGGGAGTAAAACATATATGTGGTA 59.651 37.037 18.94 11.09 41.61 3.25
2741 3022 6.159751 AGTGGGGAGTAAAACATATATGTGGT 59.840 38.462 18.94 12.03 41.61 4.16
2742 3023 6.601332 AGTGGGGAGTAAAACATATATGTGG 58.399 40.000 18.94 0.00 41.61 4.17
2746 3027 9.280456 CCCTATAGTGGGGAGTAAAACATATAT 57.720 37.037 0.00 0.00 46.50 0.86
2747 3028 8.674925 CCCTATAGTGGGGAGTAAAACATATA 57.325 38.462 0.00 0.00 46.50 0.86
2748 3029 7.569599 CCCTATAGTGGGGAGTAAAACATAT 57.430 40.000 0.00 0.00 46.50 1.78
2750 3031 5.906772 CCCTATAGTGGGGAGTAAAACAT 57.093 43.478 0.00 0.00 46.50 2.71
2762 3043 7.468496 ACTCTATGTTACTACCCCTATAGTGG 58.532 42.308 0.00 0.00 36.09 4.00
2763 3044 9.669887 CTACTCTATGTTACTACCCCTATAGTG 57.330 40.741 0.00 0.00 36.09 2.74
2764 3045 9.404077 ACTACTCTATGTTACTACCCCTATAGT 57.596 37.037 0.00 0.00 38.89 2.12
2768 3049 9.003145 TGTTACTACTCTATGTTACTACCCCTA 57.997 37.037 0.00 0.00 0.00 3.53
2769 3050 7.876371 TGTTACTACTCTATGTTACTACCCCT 58.124 38.462 0.00 0.00 0.00 4.79
2770 3051 8.574737 CATGTTACTACTCTATGTTACTACCCC 58.425 40.741 0.00 0.00 0.00 4.95
2771 3052 8.574737 CCATGTTACTACTCTATGTTACTACCC 58.425 40.741 0.00 0.00 0.00 3.69
2772 3053 8.574737 CCCATGTTACTACTCTATGTTACTACC 58.425 40.741 0.00 0.00 0.00 3.18
2773 3054 8.081025 GCCCATGTTACTACTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
2774 3055 7.781219 TGCCCATGTTACTACTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
2775 3056 6.610020 TGCCCATGTTACTACTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
2776 3057 6.812998 TGCCCATGTTACTACTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
2777 3058 7.426606 TTGCCCATGTTACTACTCTATGTTA 57.573 36.000 0.00 0.00 0.00 2.41
2778 3059 5.950544 TGCCCATGTTACTACTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
2779 3060 5.950544 TTGCCCATGTTACTACTCTATGT 57.049 39.130 0.00 0.00 0.00 2.29
2780 3061 6.291377 ACATTGCCCATGTTACTACTCTATG 58.709 40.000 0.00 0.00 44.40 2.23
2781 3062 6.500589 ACATTGCCCATGTTACTACTCTAT 57.499 37.500 0.00 0.00 44.40 1.98
2782 3063 5.950544 ACATTGCCCATGTTACTACTCTA 57.049 39.130 0.00 0.00 44.40 2.43
2783 3064 4.844349 ACATTGCCCATGTTACTACTCT 57.156 40.909 0.00 0.00 44.40 3.24
2793 3074 6.291377 ACATAGAGTAGTAACATTGCCCATG 58.709 40.000 0.00 0.00 39.07 3.66
2794 3075 6.500589 ACATAGAGTAGTAACATTGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
2795 3076 5.950544 ACATAGAGTAGTAACATTGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
2796 3077 7.498443 AGTAACATAGAGTAGTAACATTGCCC 58.502 38.462 0.00 0.00 0.00 5.36
2797 3078 9.460906 GTAGTAACATAGAGTAGTAACATTGCC 57.539 37.037 0.00 0.00 0.00 4.52
2798 3079 9.460906 GGTAGTAACATAGAGTAGTAACATTGC 57.539 37.037 0.00 0.00 0.00 3.56
2799 3080 9.962783 GGGTAGTAACATAGAGTAGTAACATTG 57.037 37.037 0.00 0.00 0.00 2.82
2800 3081 9.705103 TGGGTAGTAACATAGAGTAGTAACATT 57.295 33.333 0.00 0.00 0.00 2.71
2801 3082 9.878737 ATGGGTAGTAACATAGAGTAGTAACAT 57.121 33.333 0.00 0.00 0.00 2.71
2802 3083 9.705103 AATGGGTAGTAACATAGAGTAGTAACA 57.295 33.333 0.00 0.00 0.00 2.41
2803 3084 9.962783 CAATGGGTAGTAACATAGAGTAGTAAC 57.037 37.037 0.00 0.00 0.00 2.50
2804 3085 9.705103 ACAATGGGTAGTAACATAGAGTAGTAA 57.295 33.333 0.00 0.00 0.00 2.24
2805 3086 9.128404 CACAATGGGTAGTAACATAGAGTAGTA 57.872 37.037 0.00 0.00 0.00 1.82
2806 3087 7.069578 CCACAATGGGTAGTAACATAGAGTAGT 59.930 40.741 0.00 0.00 32.67 2.73
2807 3088 7.434492 CCACAATGGGTAGTAACATAGAGTAG 58.566 42.308 0.00 0.00 32.67 2.57
2808 3089 6.183360 GCCACAATGGGTAGTAACATAGAGTA 60.183 42.308 0.00 0.00 38.19 2.59
2809 3090 5.396436 GCCACAATGGGTAGTAACATAGAGT 60.396 44.000 0.00 0.00 38.19 3.24
2810 3091 5.057149 GCCACAATGGGTAGTAACATAGAG 58.943 45.833 0.00 0.00 38.19 2.43
2811 3092 5.031066 GCCACAATGGGTAGTAACATAGA 57.969 43.478 0.00 0.00 38.19 1.98
2823 3104 3.742640 GCTCTTAGACTAGCCACAATGGG 60.743 52.174 0.00 0.00 38.19 4.00
2824 3105 3.118629 TGCTCTTAGACTAGCCACAATGG 60.119 47.826 0.00 0.00 41.55 3.16
2825 3106 4.128925 TGCTCTTAGACTAGCCACAATG 57.871 45.455 0.00 0.00 37.97 2.82
2826 3107 4.653341 AGATGCTCTTAGACTAGCCACAAT 59.347 41.667 0.00 0.00 37.97 2.71
2827 3108 4.026744 AGATGCTCTTAGACTAGCCACAA 58.973 43.478 0.00 0.00 37.97 3.33
2828 3109 3.634448 GAGATGCTCTTAGACTAGCCACA 59.366 47.826 0.00 0.00 37.97 4.17
2829 3110 3.005367 GGAGATGCTCTTAGACTAGCCAC 59.995 52.174 0.00 0.00 37.97 5.01
2830 3111 3.226777 GGAGATGCTCTTAGACTAGCCA 58.773 50.000 0.00 0.00 37.97 4.75
2831 3112 3.226777 TGGAGATGCTCTTAGACTAGCC 58.773 50.000 0.00 0.00 37.97 3.93
2832 3113 4.098654 TGTTGGAGATGCTCTTAGACTAGC 59.901 45.833 0.00 0.00 39.25 3.42
2833 3114 5.592282 TCTGTTGGAGATGCTCTTAGACTAG 59.408 44.000 0.00 0.00 0.00 2.57
2834 3115 5.510430 TCTGTTGGAGATGCTCTTAGACTA 58.490 41.667 0.00 0.00 0.00 2.59
2835 3116 4.348486 TCTGTTGGAGATGCTCTTAGACT 58.652 43.478 0.00 0.00 0.00 3.24
2836 3117 4.727507 TCTGTTGGAGATGCTCTTAGAC 57.272 45.455 0.00 0.00 0.00 2.59
2837 3118 4.382470 GCTTCTGTTGGAGATGCTCTTAGA 60.382 45.833 0.00 0.00 44.73 2.10
2838 3119 3.870419 GCTTCTGTTGGAGATGCTCTTAG 59.130 47.826 0.00 0.00 44.73 2.18
2839 3120 3.369892 GGCTTCTGTTGGAGATGCTCTTA 60.370 47.826 0.00 0.00 46.47 2.10
2840 3121 2.617532 GGCTTCTGTTGGAGATGCTCTT 60.618 50.000 0.00 0.00 46.47 2.85
2841 3122 1.065564 GGCTTCTGTTGGAGATGCTCT 60.066 52.381 0.00 0.00 46.47 4.09
2842 3123 1.377536 GGCTTCTGTTGGAGATGCTC 58.622 55.000 0.00 0.00 46.47 4.26
2843 3124 0.034670 GGGCTTCTGTTGGAGATGCT 60.035 55.000 0.00 0.00 46.47 3.79
2844 3125 0.322816 TGGGCTTCTGTTGGAGATGC 60.323 55.000 0.00 0.00 46.52 3.91
2845 3126 2.205022 TTGGGCTTCTGTTGGAGATG 57.795 50.000 0.00 0.00 0.00 2.90
2846 3127 2.978156 TTTGGGCTTCTGTTGGAGAT 57.022 45.000 0.00 0.00 0.00 2.75
2847 3128 2.746279 TTTTGGGCTTCTGTTGGAGA 57.254 45.000 0.00 0.00 0.00 3.71
2864 3145 2.615489 TATTTTAGCGCGCCGTTTTT 57.385 40.000 30.33 11.01 0.00 1.94
2865 3146 2.615489 TTATTTTAGCGCGCCGTTTT 57.385 40.000 30.33 11.88 0.00 2.43
2866 3147 2.836479 ATTATTTTAGCGCGCCGTTT 57.164 40.000 30.33 12.34 0.00 3.60
2867 3148 2.836479 AATTATTTTAGCGCGCCGTT 57.164 40.000 30.33 12.78 0.00 4.44
2868 3149 2.836479 AAATTATTTTAGCGCGCCGT 57.164 40.000 30.33 13.66 0.00 5.68
2869 3150 4.029704 TGTAAAATTATTTTAGCGCGCCG 58.970 39.130 30.33 0.00 35.91 6.46
2870 3151 4.085772 GCTGTAAAATTATTTTAGCGCGCC 60.086 41.667 30.33 10.31 35.91 6.53
2871 3152 4.372640 CGCTGTAAAATTATTTTAGCGCGC 60.373 41.667 26.66 26.66 45.26 6.86
2872 3153 5.206206 CGCTGTAAAATTATTTTAGCGCG 57.794 39.130 24.66 24.60 45.26 6.86
2887 3168 9.763465 GCTAAAATTACTAAAATGACGCTGTAA 57.237 29.630 0.00 0.00 0.00 2.41
2888 3169 8.111836 CGCTAAAATTACTAAAATGACGCTGTA 58.888 33.333 0.00 0.00 0.00 2.74
2889 3170 6.959311 CGCTAAAATTACTAAAATGACGCTGT 59.041 34.615 0.00 0.00 0.00 4.40
2890 3171 6.076092 GCGCTAAAATTACTAAAATGACGCTG 60.076 38.462 0.00 0.00 37.32 5.18
2891 3172 5.963586 GCGCTAAAATTACTAAAATGACGCT 59.036 36.000 0.00 0.00 37.32 5.07
2892 3173 5.109261 CGCGCTAAAATTACTAAAATGACGC 60.109 40.000 5.56 0.00 36.98 5.19
2893 3174 5.109261 GCGCGCTAAAATTACTAAAATGACG 60.109 40.000 26.67 0.00 0.00 4.35
2894 3175 5.170803 GGCGCGCTAAAATTACTAAAATGAC 59.829 40.000 32.29 2.61 0.00 3.06
2895 3176 5.267776 GGCGCGCTAAAATTACTAAAATGA 58.732 37.500 32.29 0.00 0.00 2.57
2896 3177 4.144051 CGGCGCGCTAAAATTACTAAAATG 59.856 41.667 32.29 0.00 0.00 2.32
2897 3178 4.201841 ACGGCGCGCTAAAATTACTAAAAT 60.202 37.500 32.29 0.00 0.00 1.82
2898 3179 3.124976 ACGGCGCGCTAAAATTACTAAAA 59.875 39.130 32.29 0.00 0.00 1.52
2899 3180 2.672381 ACGGCGCGCTAAAATTACTAAA 59.328 40.909 32.29 0.00 0.00 1.85
2900 3181 2.029486 CACGGCGCGCTAAAATTACTAA 59.971 45.455 32.29 0.00 0.00 2.24
2901 3182 1.589320 CACGGCGCGCTAAAATTACTA 59.411 47.619 32.29 0.00 0.00 1.82
2902 3183 0.372334 CACGGCGCGCTAAAATTACT 59.628 50.000 32.29 0.00 0.00 2.24
2903 3184 0.587985 CCACGGCGCGCTAAAATTAC 60.588 55.000 32.29 10.55 0.00 1.89
2904 3185 1.716760 CCACGGCGCGCTAAAATTA 59.283 52.632 32.29 0.00 0.00 1.40
2905 3186 2.483288 CCACGGCGCGCTAAAATT 59.517 55.556 32.29 5.93 0.00 1.82
2906 3187 4.174129 GCCACGGCGCGCTAAAAT 62.174 61.111 32.29 9.20 0.00 1.82
2916 3197 3.195698 GACTGAATCGGCCACGGC 61.196 66.667 2.24 0.00 41.39 5.68
2917 3198 2.511600 GGACTGAATCGGCCACGG 60.512 66.667 2.24 0.00 41.39 4.94
2918 3199 1.811266 CTGGACTGAATCGGCCACG 60.811 63.158 2.24 0.00 42.74 4.94
2919 3200 2.109126 GCTGGACTGAATCGGCCAC 61.109 63.158 2.24 0.00 0.00 5.01
2920 3201 2.123248 TTGCTGGACTGAATCGGCCA 62.123 55.000 2.24 5.40 0.00 5.36
2921 3202 0.960364 TTTGCTGGACTGAATCGGCC 60.960 55.000 0.00 0.00 0.00 6.13
2922 3203 0.449388 CTTTGCTGGACTGAATCGGC 59.551 55.000 0.00 0.00 0.00 5.54
2923 3204 1.089920 CCTTTGCTGGACTGAATCGG 58.910 55.000 0.00 0.00 0.00 4.18
2924 3205 0.449388 GCCTTTGCTGGACTGAATCG 59.551 55.000 0.00 0.00 33.53 3.34
2925 3206 1.200948 GTGCCTTTGCTGGACTGAATC 59.799 52.381 0.00 0.00 38.71 2.52
2926 3207 1.251251 GTGCCTTTGCTGGACTGAAT 58.749 50.000 0.00 0.00 38.71 2.57
2927 3208 0.106769 TGTGCCTTTGCTGGACTGAA 60.107 50.000 0.00 0.00 38.71 3.02
2928 3209 0.106769 TTGTGCCTTTGCTGGACTGA 60.107 50.000 0.00 0.00 38.71 3.41
2929 3210 0.746063 TTTGTGCCTTTGCTGGACTG 59.254 50.000 0.00 0.00 38.71 3.51
2930 3211 1.484038 TTTTGTGCCTTTGCTGGACT 58.516 45.000 0.00 0.00 38.71 3.85
2931 3212 2.307934 TTTTTGTGCCTTTGCTGGAC 57.692 45.000 0.00 0.00 38.71 4.02
2932 3213 4.888326 ATATTTTTGTGCCTTTGCTGGA 57.112 36.364 0.00 0.00 38.71 3.86
2933 3214 4.567959 GCTATATTTTTGTGCCTTTGCTGG 59.432 41.667 0.00 0.00 38.71 4.85
2934 3215 4.266029 CGCTATATTTTTGTGCCTTTGCTG 59.734 41.667 0.00 0.00 38.71 4.41
2935 3216 4.423732 CGCTATATTTTTGTGCCTTTGCT 58.576 39.130 0.00 0.00 38.71 3.91
2936 3217 3.000222 GCGCTATATTTTTGTGCCTTTGC 60.000 43.478 0.00 0.00 38.26 3.68
2937 3218 3.240401 CGCGCTATATTTTTGTGCCTTTG 59.760 43.478 5.56 0.00 34.16 2.77
2938 3219 3.434637 CGCGCTATATTTTTGTGCCTTT 58.565 40.909 5.56 0.00 34.16 3.11
2939 3220 2.794631 GCGCGCTATATTTTTGTGCCTT 60.795 45.455 26.67 0.00 34.16 4.35
2940 3221 1.268539 GCGCGCTATATTTTTGTGCCT 60.269 47.619 26.67 0.00 34.16 4.75
2941 3222 1.120437 GCGCGCTATATTTTTGTGCC 58.880 50.000 26.67 0.00 34.16 5.01
2942 3223 1.821336 TGCGCGCTATATTTTTGTGC 58.179 45.000 33.29 0.00 36.64 4.57
2943 3224 3.240401 CCTTTGCGCGCTATATTTTTGTG 59.760 43.478 33.29 8.44 0.00 3.33
2944 3225 3.127895 TCCTTTGCGCGCTATATTTTTGT 59.872 39.130 33.29 0.00 0.00 2.83
2945 3226 3.482110 GTCCTTTGCGCGCTATATTTTTG 59.518 43.478 33.29 10.65 0.00 2.44
2946 3227 3.127895 TGTCCTTTGCGCGCTATATTTTT 59.872 39.130 33.29 0.00 0.00 1.94
2947 3228 2.680841 TGTCCTTTGCGCGCTATATTTT 59.319 40.909 33.29 0.00 0.00 1.82
2948 3229 2.285083 TGTCCTTTGCGCGCTATATTT 58.715 42.857 33.29 0.00 0.00 1.40
2949 3230 1.867233 CTGTCCTTTGCGCGCTATATT 59.133 47.619 33.29 0.00 0.00 1.28
2950 3231 1.502231 CTGTCCTTTGCGCGCTATAT 58.498 50.000 33.29 0.00 0.00 0.86
2951 3232 1.151777 GCTGTCCTTTGCGCGCTATA 61.152 55.000 33.29 14.89 0.00 1.31
2952 3233 2.464459 GCTGTCCTTTGCGCGCTAT 61.464 57.895 33.29 0.00 0.00 2.97
2953 3234 3.118454 GCTGTCCTTTGCGCGCTA 61.118 61.111 33.29 23.57 0.00 4.26
2959 3240 4.748679 CTGCGCGCTGTCCTTTGC 62.749 66.667 33.29 0.00 0.00 3.68
2960 3241 4.748679 GCTGCGCGCTGTCCTTTG 62.749 66.667 33.52 14.47 35.14 2.77
2970 3251 4.081030 CTGTTGGACTGCTGCGCG 62.081 66.667 0.00 0.00 0.00 6.86
2971 3252 2.666190 TCTGTTGGACTGCTGCGC 60.666 61.111 0.00 0.00 0.00 6.09
2972 3253 2.661566 CGTCTGTTGGACTGCTGCG 61.662 63.158 0.00 0.00 42.44 5.18
2973 3254 2.959357 GCGTCTGTTGGACTGCTGC 61.959 63.158 0.00 0.00 42.44 5.25
2974 3255 1.595109 TGCGTCTGTTGGACTGCTG 60.595 57.895 0.00 0.00 42.44 4.41
2975 3256 1.595382 GTGCGTCTGTTGGACTGCT 60.595 57.895 0.00 0.00 42.44 4.24
2976 3257 0.319555 TAGTGCGTCTGTTGGACTGC 60.320 55.000 6.39 0.00 42.44 4.40
2977 3258 2.148916 TTAGTGCGTCTGTTGGACTG 57.851 50.000 6.39 0.00 42.44 3.51
2978 3259 2.902705 TTTAGTGCGTCTGTTGGACT 57.097 45.000 0.00 2.43 42.44 3.85
2979 3260 3.955771 TTTTTAGTGCGTCTGTTGGAC 57.044 42.857 0.00 0.00 41.28 4.02
3001 3282 9.589111 TGTTGTAGATATATTTGTGACGCTTTA 57.411 29.630 0.00 0.00 0.00 1.85
3002 3283 8.487313 TGTTGTAGATATATTTGTGACGCTTT 57.513 30.769 0.00 0.00 0.00 3.51
3003 3284 8.487313 TTGTTGTAGATATATTTGTGACGCTT 57.513 30.769 0.00 0.00 0.00 4.68
3004 3285 8.388103 GTTTGTTGTAGATATATTTGTGACGCT 58.612 33.333 0.00 0.00 0.00 5.07
3005 3286 8.172484 TGTTTGTTGTAGATATATTTGTGACGC 58.828 33.333 0.00 0.00 0.00 5.19
3006 3287 9.689075 CTGTTTGTTGTAGATATATTTGTGACG 57.311 33.333 0.00 0.00 0.00 4.35
3007 3288 9.988350 CCTGTTTGTTGTAGATATATTTGTGAC 57.012 33.333 0.00 0.00 0.00 3.67
3008 3289 9.733556 ACCTGTTTGTTGTAGATATATTTGTGA 57.266 29.630 0.00 0.00 0.00 3.58
3009 3290 9.988350 GACCTGTTTGTTGTAGATATATTTGTG 57.012 33.333 0.00 0.00 0.00 3.33
3010 3291 9.174166 GGACCTGTTTGTTGTAGATATATTTGT 57.826 33.333 0.00 0.00 0.00 2.83
3011 3292 8.621286 GGGACCTGTTTGTTGTAGATATATTTG 58.379 37.037 0.00 0.00 0.00 2.32
3012 3293 8.557450 AGGGACCTGTTTGTTGTAGATATATTT 58.443 33.333 0.00 0.00 0.00 1.40
3013 3294 8.102484 AGGGACCTGTTTGTTGTAGATATATT 57.898 34.615 0.00 0.00 0.00 1.28
3014 3295 7.691993 AGGGACCTGTTTGTTGTAGATATAT 57.308 36.000 0.00 0.00 0.00 0.86
3015 3296 8.612486 TTAGGGACCTGTTTGTTGTAGATATA 57.388 34.615 0.00 0.00 0.00 0.86
3016 3297 7.504926 TTAGGGACCTGTTTGTTGTAGATAT 57.495 36.000 0.00 0.00 0.00 1.63
3017 3298 6.938698 TTAGGGACCTGTTTGTTGTAGATA 57.061 37.500 0.00 0.00 0.00 1.98
3018 3299 5.836024 TTAGGGACCTGTTTGTTGTAGAT 57.164 39.130 0.00 0.00 0.00 1.98
3019 3300 5.104444 TGTTTAGGGACCTGTTTGTTGTAGA 60.104 40.000 0.00 0.00 0.00 2.59
3020 3301 5.127491 TGTTTAGGGACCTGTTTGTTGTAG 58.873 41.667 0.00 0.00 0.00 2.74
3021 3302 5.113446 TGTTTAGGGACCTGTTTGTTGTA 57.887 39.130 0.00 0.00 0.00 2.41
3022 3303 3.970842 TGTTTAGGGACCTGTTTGTTGT 58.029 40.909 0.00 0.00 0.00 3.32
3023 3304 5.529581 AATGTTTAGGGACCTGTTTGTTG 57.470 39.130 0.00 0.00 0.00 3.33
3024 3305 6.608002 TGTAAATGTTTAGGGACCTGTTTGTT 59.392 34.615 0.00 0.00 0.00 2.83
3025 3306 6.130569 TGTAAATGTTTAGGGACCTGTTTGT 58.869 36.000 0.00 0.00 0.00 2.83
3026 3307 6.642707 TGTAAATGTTTAGGGACCTGTTTG 57.357 37.500 0.00 0.00 0.00 2.93
3027 3308 7.663043 TTTGTAAATGTTTAGGGACCTGTTT 57.337 32.000 0.00 0.00 0.00 2.83
3028 3309 7.849322 ATTTGTAAATGTTTAGGGACCTGTT 57.151 32.000 0.00 0.00 0.00 3.16
3029 3310 8.943594 TTATTTGTAAATGTTTAGGGACCTGT 57.056 30.769 0.00 0.00 0.00 4.00
3030 3311 9.020731 ACTTATTTGTAAATGTTTAGGGACCTG 57.979 33.333 0.00 0.00 0.00 4.00
3031 3312 9.239551 GACTTATTTGTAAATGTTTAGGGACCT 57.760 33.333 0.00 0.00 0.00 3.85
3032 3313 8.464404 GGACTTATTTGTAAATGTTTAGGGACC 58.536 37.037 0.27 0.00 0.00 4.46
3033 3314 9.016438 TGGACTTATTTGTAAATGTTTAGGGAC 57.984 33.333 0.27 0.00 0.00 4.46
3034 3315 9.762381 ATGGACTTATTTGTAAATGTTTAGGGA 57.238 29.630 0.27 0.00 0.00 4.20
3041 3322 9.685276 TGATCAGATGGACTTATTTGTAAATGT 57.315 29.630 0.00 0.00 0.00 2.71
3046 3327 9.513906 TGTTTTGATCAGATGGACTTATTTGTA 57.486 29.630 0.00 0.00 0.00 2.41
3047 3328 8.408043 TGTTTTGATCAGATGGACTTATTTGT 57.592 30.769 0.00 0.00 0.00 2.83
3048 3329 9.695526 TTTGTTTTGATCAGATGGACTTATTTG 57.304 29.630 0.00 0.00 0.00 2.32
3051 3332 9.696917 GTTTTTGTTTTGATCAGATGGACTTAT 57.303 29.630 0.00 0.00 0.00 1.73
3052 3333 7.860373 CGTTTTTGTTTTGATCAGATGGACTTA 59.140 33.333 0.00 0.00 0.00 2.24
3053 3334 6.697019 CGTTTTTGTTTTGATCAGATGGACTT 59.303 34.615 0.00 0.00 0.00 3.01
3054 3335 6.208644 CGTTTTTGTTTTGATCAGATGGACT 58.791 36.000 0.00 0.00 0.00 3.85
3055 3336 5.107875 GCGTTTTTGTTTTGATCAGATGGAC 60.108 40.000 0.00 0.00 0.00 4.02
3056 3337 4.981674 GCGTTTTTGTTTTGATCAGATGGA 59.018 37.500 0.00 0.00 0.00 3.41
3057 3338 4.744137 TGCGTTTTTGTTTTGATCAGATGG 59.256 37.500 0.00 0.00 0.00 3.51
3058 3339 5.886715 TGCGTTTTTGTTTTGATCAGATG 57.113 34.783 0.00 0.00 0.00 2.90
3059 3340 7.346695 CAATTGCGTTTTTGTTTTGATCAGAT 58.653 30.769 0.00 0.00 0.00 2.90
3060 3341 6.238049 CCAATTGCGTTTTTGTTTTGATCAGA 60.238 34.615 0.00 0.00 0.00 3.27
3061 3342 5.902981 CCAATTGCGTTTTTGTTTTGATCAG 59.097 36.000 0.00 0.00 0.00 2.90
3062 3343 5.220739 CCCAATTGCGTTTTTGTTTTGATCA 60.221 36.000 0.00 0.00 0.00 2.92
3063 3344 5.204101 CCCAATTGCGTTTTTGTTTTGATC 58.796 37.500 0.00 0.00 0.00 2.92
3064 3345 4.637977 ACCCAATTGCGTTTTTGTTTTGAT 59.362 33.333 0.00 0.00 0.00 2.57
3065 3346 4.003648 ACCCAATTGCGTTTTTGTTTTGA 58.996 34.783 0.00 0.00 0.00 2.69
3066 3347 4.338596 GACCCAATTGCGTTTTTGTTTTG 58.661 39.130 0.00 0.00 0.00 2.44
3067 3348 3.375610 GGACCCAATTGCGTTTTTGTTTT 59.624 39.130 0.00 0.00 0.00 2.43
3068 3349 2.939756 GGACCCAATTGCGTTTTTGTTT 59.060 40.909 0.00 0.00 0.00 2.83
3069 3350 2.556257 GGACCCAATTGCGTTTTTGTT 58.444 42.857 0.00 0.00 0.00 2.83
3070 3351 1.202592 GGGACCCAATTGCGTTTTTGT 60.203 47.619 5.33 0.00 0.00 2.83
3071 3352 1.507562 GGGACCCAATTGCGTTTTTG 58.492 50.000 5.33 0.00 0.00 2.44
3072 3353 3.999821 GGGACCCAATTGCGTTTTT 57.000 47.368 5.33 0.00 0.00 1.94
3091 3372 1.133790 GCTAGCTTGCTCCAACCATTG 59.866 52.381 13.17 0.00 0.00 2.82
3092 3373 1.005215 AGCTAGCTTGCTCCAACCATT 59.995 47.619 17.30 0.00 39.34 3.16
3093 3374 0.622665 AGCTAGCTTGCTCCAACCAT 59.377 50.000 17.30 0.00 39.34 3.55
3094 3375 0.401738 AAGCTAGCTTGCTCCAACCA 59.598 50.000 28.83 0.00 43.24 3.67
3095 3376 0.807496 CAAGCTAGCTTGCTCCAACC 59.193 55.000 37.13 0.00 45.38 3.77
3104 3385 1.818642 CAAGGTCAGCAAGCTAGCTT 58.181 50.000 24.42 24.42 43.70 3.74
3105 3386 4.779748 TTGCAAGGTCAGCAAGCTAGCT 62.780 50.000 12.68 12.68 46.13 3.32
3106 3387 0.957395 TGCAAGGTCAGCAAGCTAGC 60.957 55.000 6.62 6.62 39.39 3.42
3107 3388 1.527034 TTGCAAGGTCAGCAAGCTAG 58.473 50.000 0.00 0.00 46.13 3.42
3108 3389 3.723772 TTGCAAGGTCAGCAAGCTA 57.276 47.368 0.00 0.00 46.13 3.32
3109 3390 4.585070 TTGCAAGGTCAGCAAGCT 57.415 50.000 0.00 0.00 46.13 3.74
3113 3394 2.799017 AGATGATTTGCAAGGTCAGCA 58.201 42.857 24.54 11.06 40.85 4.41
3114 3395 3.428589 GGAAGATGATTTGCAAGGTCAGC 60.429 47.826 18.73 18.73 0.00 4.26
3115 3396 3.181503 CGGAAGATGATTTGCAAGGTCAG 60.182 47.826 17.83 4.37 0.00 3.51
3116 3397 2.749076 CGGAAGATGATTTGCAAGGTCA 59.251 45.455 15.99 15.99 0.00 4.02
3117 3398 2.478539 GCGGAAGATGATTTGCAAGGTC 60.479 50.000 0.00 3.05 0.00 3.85
3118 3399 1.474077 GCGGAAGATGATTTGCAAGGT 59.526 47.619 0.00 0.00 0.00 3.50
3119 3400 1.202336 GGCGGAAGATGATTTGCAAGG 60.202 52.381 0.00 0.00 0.00 3.61
3120 3401 1.532505 CGGCGGAAGATGATTTGCAAG 60.533 52.381 0.00 0.00 0.00 4.01
3121 3402 0.451383 CGGCGGAAGATGATTTGCAA 59.549 50.000 0.00 0.00 0.00 4.08
3122 3403 1.375853 CCGGCGGAAGATGATTTGCA 61.376 55.000 24.41 0.00 0.00 4.08
3123 3404 1.356624 CCGGCGGAAGATGATTTGC 59.643 57.895 24.41 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.