Multiple sequence alignment - TraesCS1D01G312000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G312000 chr1D 100.000 2426 0 0 1 2426 407864281 407861856 0.000000e+00 4481.0
1 TraesCS1D01G312000 chr1D 90.074 544 38 11 1 534 102531592 102531055 0.000000e+00 691.0
2 TraesCS1D01G312000 chr1D 81.429 70 12 1 2257 2325 342103626 342103695 3.370000e-04 56.5
3 TraesCS1D01G312000 chr1B 92.262 1008 46 13 559 1551 548516090 548515100 0.000000e+00 1400.0
4 TraesCS1D01G312000 chr1B 88.406 483 33 4 1967 2426 548482455 548481973 5.860000e-156 560.0
5 TraesCS1D01G312000 chr1B 93.333 285 16 3 1698 1980 548512274 548511991 3.730000e-113 418.0
6 TraesCS1D01G312000 chr1B 92.958 284 18 2 1698 1979 548513297 548513014 1.740000e-111 412.0
7 TraesCS1D01G312000 chr1B 95.385 130 6 0 1545 1674 548513793 548513664 8.790000e-50 207.0
8 TraesCS1D01G312000 chr1A 88.099 1126 70 29 559 1639 503332940 503331834 0.000000e+00 1279.0
9 TraesCS1D01G312000 chr1A 81.921 177 18 7 395 560 211851337 211851164 1.170000e-28 137.0
10 TraesCS1D01G312000 chr6D 85.391 575 45 17 1 564 85909881 85910427 5.860000e-156 560.0
11 TraesCS1D01G312000 chr6D 82.353 68 11 1 2257 2323 266380871 266380938 9.370000e-05 58.4
12 TraesCS1D01G312000 chr3D 83.497 509 44 18 80 560 594966185 594965689 2.860000e-119 438.0
13 TraesCS1D01G312000 chr5A 83.924 367 38 14 207 563 64659056 64659411 5.000000e-87 331.0
14 TraesCS1D01G312000 chr4A 81.538 390 48 14 190 562 36623028 36623410 1.410000e-77 300.0
15 TraesCS1D01G312000 chr4A 79.602 201 31 9 266 463 616241096 616240903 4.210000e-28 135.0
16 TraesCS1D01G312000 chr2B 86.170 282 27 9 190 463 108507623 108507346 6.560000e-76 294.0
17 TraesCS1D01G312000 chr7D 85.019 267 21 7 308 563 120320912 120321170 1.110000e-63 254.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G312000 chr1D 407861856 407864281 2425 True 4481.00 4481 100.0000 1 2426 1 chr1D.!!$R2 2425
1 TraesCS1D01G312000 chr1D 102531055 102531592 537 True 691.00 691 90.0740 1 534 1 chr1D.!!$R1 533
2 TraesCS1D01G312000 chr1B 548511991 548516090 4099 True 609.25 1400 93.4845 559 1980 4 chr1B.!!$R2 1421
3 TraesCS1D01G312000 chr1A 503331834 503332940 1106 True 1279.00 1279 88.0990 559 1639 1 chr1A.!!$R2 1080
4 TraesCS1D01G312000 chr6D 85909881 85910427 546 False 560.00 560 85.3910 1 564 1 chr6D.!!$F1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 884 0.108329 ACGTAATCCAAGGAGCACCG 60.108 55.0 0.0 0.0 41.83 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 4987 0.034059 AAGTGAGTGAGTGAAGGCCG 59.966 55.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 2.664851 GGCATGCCTATACGCGCA 60.665 61.111 29.98 0.00 39.79 6.09
77 78 1.728074 CGCGCACTCGTCACTACAA 60.728 57.895 8.75 0.00 38.14 2.41
294 300 1.111277 GTGGGAGAAGAGAGAGAGGC 58.889 60.000 0.00 0.00 0.00 4.70
322 328 0.761802 GAGAGATGGGATGGGTGGTC 59.238 60.000 0.00 0.00 0.00 4.02
353 359 2.331893 GGCCACGCAGCACATGTAA 61.332 57.895 0.00 0.00 0.00 2.41
354 360 1.135315 GCCACGCAGCACATGTAAG 59.865 57.895 0.00 0.00 0.00 2.34
355 361 1.577328 GCCACGCAGCACATGTAAGT 61.577 55.000 0.00 0.00 0.00 2.24
380 386 2.214181 GAAGCGGACGAGGAGAGCAA 62.214 60.000 0.00 0.00 0.00 3.91
391 397 0.799393 GGAGAGCAAAGAAAGCGTCC 59.201 55.000 0.00 0.00 37.01 4.79
405 411 2.241880 CGTCCGCTTTGTGTTCCGT 61.242 57.895 0.00 0.00 0.00 4.69
456 462 1.819632 GAAATGGGTCTGCGCGGAT 60.820 57.895 24.03 4.53 0.00 4.18
509 526 0.179094 TCTATTTTGTCCGCGCCGAT 60.179 50.000 0.00 0.00 0.00 4.18
511 528 0.460459 TATTTTGTCCGCGCCGATCA 60.460 50.000 0.00 0.00 0.00 2.92
517 534 3.483665 CCGCGCCGATCAAAACGA 61.484 61.111 0.00 0.00 0.00 3.85
520 537 1.205568 GCGCCGATCAAAACGAACA 59.794 52.632 0.00 0.00 0.00 3.18
529 546 0.591170 CAAAACGAACACAGGCGGAT 59.409 50.000 0.00 0.00 0.00 4.18
544 561 1.227383 GGATGAAATGGGTCGCCCT 59.773 57.895 14.76 0.00 45.70 5.19
549 566 0.740737 GAAATGGGTCGCCCTCATTG 59.259 55.000 14.76 0.00 45.70 2.82
589 606 3.462483 TCCAAATACACGACACACTGT 57.538 42.857 0.00 0.00 0.00 3.55
595 613 0.458260 ACACGACACACTGTAGCACA 59.542 50.000 0.00 0.00 0.00 4.57
612 631 2.483538 GCACACAGCTGGGAACAAAATT 60.484 45.455 26.06 0.00 42.06 1.82
652 671 7.415095 CGGTGAATGAATATGGCTTTGTTAAGA 60.415 37.037 0.00 0.00 32.92 2.10
667 686 3.435327 TGTTAAGACATGTGCATTCCGTC 59.565 43.478 1.15 0.00 0.00 4.79
679 698 0.247736 ATTCCGTCTGTGCTGACTCC 59.752 55.000 7.44 0.00 35.00 3.85
745 764 4.504858 GATGAGGTATTCGGTGTGTTCTT 58.495 43.478 0.00 0.00 0.00 2.52
781 804 8.939586 AATTTATTTACAAGATGCATCGATCG 57.060 30.769 20.67 9.36 0.00 3.69
785 808 0.780596 CAAGATGCATCGATCGACCG 59.219 55.000 22.06 15.73 0.00 4.79
792 815 0.806102 CATCGATCGACCGCCAAAGT 60.806 55.000 22.06 0.00 0.00 2.66
853 877 0.999406 CGTGCTGACGTAATCCAAGG 59.001 55.000 0.00 0.00 40.91 3.61
860 884 0.108329 ACGTAATCCAAGGAGCACCG 60.108 55.000 0.00 0.00 41.83 4.94
864 888 0.909610 AATCCAAGGAGCACCGAGGA 60.910 55.000 16.36 16.36 43.85 3.71
924 948 3.986006 GCGTGGACGTCCCTGTCA 61.986 66.667 31.19 10.01 40.72 3.58
961 985 2.762327 CCCGGCGTATATATACCCTTGT 59.238 50.000 15.70 0.00 0.00 3.16
971 995 7.489435 CGTATATATACCCTTGTTGAGATGCTG 59.511 40.741 15.70 0.00 0.00 4.41
1020 1044 2.758089 GCCCAGCAGCTCATTGACG 61.758 63.158 0.00 0.00 0.00 4.35
1023 1047 1.088340 CCAGCAGCTCATTGACGGAG 61.088 60.000 0.00 0.00 35.47 4.63
1024 1048 0.108472 CAGCAGCTCATTGACGGAGA 60.108 55.000 0.00 0.00 34.24 3.71
1051 1075 3.147595 CTCCAGACCGATCGGCCA 61.148 66.667 33.62 12.04 39.32 5.36
1074 1098 4.168291 CGCCCCTCCTCCTTCAGC 62.168 72.222 0.00 0.00 0.00 4.26
1656 3038 5.163301 ACTGTATCCTTCATTCAACGCCTAT 60.163 40.000 0.00 0.00 0.00 2.57
1679 3394 3.903714 TGTTCATCTTCTTCCTCTGACCA 59.096 43.478 0.00 0.00 0.00 4.02
1713 3438 1.398692 CTACTCTGCCTCTCCTCCAC 58.601 60.000 0.00 0.00 0.00 4.02
1714 3439 0.033011 TACTCTGCCTCTCCTCCACC 60.033 60.000 0.00 0.00 0.00 4.61
1724 3449 0.321671 CTCCTCCACCATGACGTTGT 59.678 55.000 0.00 0.00 0.00 3.32
1748 3473 2.030562 CCACAGTGTGTCCCCGTC 59.969 66.667 21.48 0.00 0.00 4.79
1750 3475 1.445942 CACAGTGTGTCCCCGTCTT 59.554 57.895 15.43 0.00 0.00 3.01
1769 4516 2.046023 TCTTCGGGGCTGCACATG 60.046 61.111 3.46 0.00 0.00 3.21
1842 4589 3.635591 CTTAAGCCCATGATCCAAACCT 58.364 45.455 0.00 0.00 0.00 3.50
1870 4617 1.153429 GCGACCAGACCGGCTTAAT 60.153 57.895 0.00 0.00 39.03 1.40
1885 4632 3.448660 GGCTTAATGAAAGGTCCATTGCT 59.551 43.478 0.00 0.00 35.94 3.91
1901 4648 6.541641 GTCCATTGCTGAGAATTTCATCTACT 59.458 38.462 0.00 0.00 34.68 2.57
1903 4650 6.541278 CCATTGCTGAGAATTTCATCTACTCA 59.459 38.462 0.00 0.00 34.68 3.41
1928 4675 3.056821 GGACCTTCTTAATTGTTGCCACC 60.057 47.826 0.00 0.00 0.00 4.61
1931 4678 4.202631 ACCTTCTTAATTGTTGCCACCCTA 60.203 41.667 0.00 0.00 0.00 3.53
1932 4679 4.770010 CCTTCTTAATTGTTGCCACCCTAA 59.230 41.667 0.00 0.00 0.00 2.69
1975 4724 3.769536 ACACGACTTTTGAAAAGCCTTG 58.230 40.909 16.96 12.41 0.00 3.61
1980 4729 4.274950 CGACTTTTGAAAAGCCTTGGACTA 59.725 41.667 16.96 0.00 0.00 2.59
1981 4730 5.048713 CGACTTTTGAAAAGCCTTGGACTAT 60.049 40.000 16.96 0.00 0.00 2.12
1982 4731 6.089249 ACTTTTGAAAAGCCTTGGACTATG 57.911 37.500 16.96 0.00 0.00 2.23
1983 4732 5.598417 ACTTTTGAAAAGCCTTGGACTATGT 59.402 36.000 16.96 0.00 0.00 2.29
1984 4733 6.098266 ACTTTTGAAAAGCCTTGGACTATGTT 59.902 34.615 16.96 0.00 0.00 2.71
1985 4734 7.286775 ACTTTTGAAAAGCCTTGGACTATGTTA 59.713 33.333 16.96 0.00 0.00 2.41
1986 4735 6.817765 TTGAAAAGCCTTGGACTATGTTAG 57.182 37.500 0.00 0.00 0.00 2.34
1987 4736 4.700213 TGAAAAGCCTTGGACTATGTTAGC 59.300 41.667 0.00 0.00 0.00 3.09
1988 4737 4.576330 AAAGCCTTGGACTATGTTAGCT 57.424 40.909 0.00 0.00 0.00 3.32
1989 4738 3.550437 AGCCTTGGACTATGTTAGCTG 57.450 47.619 0.00 0.00 0.00 4.24
1990 4739 2.171448 AGCCTTGGACTATGTTAGCTGG 59.829 50.000 0.00 0.00 0.00 4.85
1991 4740 2.746472 GCCTTGGACTATGTTAGCTGGG 60.746 54.545 0.00 0.00 0.00 4.45
1992 4741 2.771943 CCTTGGACTATGTTAGCTGGGA 59.228 50.000 0.00 0.00 0.00 4.37
1993 4742 3.392616 CCTTGGACTATGTTAGCTGGGAT 59.607 47.826 0.00 0.00 0.00 3.85
1994 4743 4.141390 CCTTGGACTATGTTAGCTGGGATT 60.141 45.833 0.00 0.00 0.00 3.01
1995 4744 4.689612 TGGACTATGTTAGCTGGGATTC 57.310 45.455 0.00 0.00 0.00 2.52
1996 4745 3.391296 TGGACTATGTTAGCTGGGATTCC 59.609 47.826 0.00 0.00 0.00 3.01
1997 4746 3.244596 GGACTATGTTAGCTGGGATTCCC 60.245 52.174 15.40 15.40 45.71 3.97
1998 4747 3.648545 GACTATGTTAGCTGGGATTCCCT 59.351 47.826 22.38 5.26 45.70 4.20
1999 4748 3.648545 ACTATGTTAGCTGGGATTCCCTC 59.351 47.826 22.38 13.75 45.70 4.30
2000 4749 1.213296 TGTTAGCTGGGATTCCCTCC 58.787 55.000 22.38 12.79 45.70 4.30
2001 4750 1.274416 TGTTAGCTGGGATTCCCTCCT 60.274 52.381 22.38 18.61 45.70 3.69
2002 4751 1.418264 GTTAGCTGGGATTCCCTCCTC 59.582 57.143 22.38 8.76 45.70 3.71
2003 4752 0.944999 TAGCTGGGATTCCCTCCTCT 59.055 55.000 22.38 14.76 45.70 3.69
2004 4753 0.399806 AGCTGGGATTCCCTCCTCTC 60.400 60.000 22.38 5.53 45.70 3.20
2005 4754 1.414866 GCTGGGATTCCCTCCTCTCC 61.415 65.000 22.38 0.10 45.70 3.71
2006 4755 0.030705 CTGGGATTCCCTCCTCTCCA 60.031 60.000 22.38 0.00 45.70 3.86
2007 4756 0.649992 TGGGATTCCCTCCTCTCCAT 59.350 55.000 22.38 0.00 45.70 3.41
2008 4757 1.011293 TGGGATTCCCTCCTCTCCATT 59.989 52.381 22.38 0.00 45.70 3.16
2009 4758 1.702401 GGGATTCCCTCCTCTCCATTC 59.298 57.143 14.98 0.00 44.28 2.67
2010 4759 2.698653 GGGATTCCCTCCTCTCCATTCT 60.699 54.545 14.98 0.00 44.28 2.40
2011 4760 3.052329 GGATTCCCTCCTCTCCATTCTT 58.948 50.000 0.00 0.00 41.29 2.52
2012 4761 3.461458 GGATTCCCTCCTCTCCATTCTTT 59.539 47.826 0.00 0.00 41.29 2.52
2013 4762 4.079500 GGATTCCCTCCTCTCCATTCTTTT 60.080 45.833 0.00 0.00 41.29 2.27
2014 4763 4.576330 TTCCCTCCTCTCCATTCTTTTC 57.424 45.455 0.00 0.00 0.00 2.29
2015 4764 2.501723 TCCCTCCTCTCCATTCTTTTCG 59.498 50.000 0.00 0.00 0.00 3.46
2016 4765 2.237392 CCCTCCTCTCCATTCTTTTCGT 59.763 50.000 0.00 0.00 0.00 3.85
2017 4766 3.307762 CCCTCCTCTCCATTCTTTTCGTT 60.308 47.826 0.00 0.00 0.00 3.85
2018 4767 3.935828 CCTCCTCTCCATTCTTTTCGTTC 59.064 47.826 0.00 0.00 0.00 3.95
2019 4768 3.585862 TCCTCTCCATTCTTTTCGTTCG 58.414 45.455 0.00 0.00 0.00 3.95
2020 4769 3.006537 TCCTCTCCATTCTTTTCGTTCGT 59.993 43.478 0.00 0.00 0.00 3.85
2021 4770 3.123621 CCTCTCCATTCTTTTCGTTCGTG 59.876 47.826 0.00 0.00 0.00 4.35
2022 4771 3.064207 TCTCCATTCTTTTCGTTCGTGG 58.936 45.455 0.00 0.00 0.00 4.94
2023 4772 1.533731 TCCATTCTTTTCGTTCGTGGC 59.466 47.619 0.00 0.00 0.00 5.01
2024 4773 1.535462 CCATTCTTTTCGTTCGTGGCT 59.465 47.619 0.00 0.00 0.00 4.75
2025 4774 2.031157 CCATTCTTTTCGTTCGTGGCTT 60.031 45.455 0.00 0.00 0.00 4.35
2026 4775 3.226347 CATTCTTTTCGTTCGTGGCTTC 58.774 45.455 0.00 0.00 0.00 3.86
2027 4776 1.223187 TCTTTTCGTTCGTGGCTTCC 58.777 50.000 0.00 0.00 0.00 3.46
2028 4777 0.237498 CTTTTCGTTCGTGGCTTCCC 59.763 55.000 0.00 0.00 0.00 3.97
2029 4778 0.179040 TTTTCGTTCGTGGCTTCCCT 60.179 50.000 0.00 0.00 0.00 4.20
2030 4779 0.601841 TTTCGTTCGTGGCTTCCCTC 60.602 55.000 0.00 0.00 0.00 4.30
2031 4780 1.469335 TTCGTTCGTGGCTTCCCTCT 61.469 55.000 0.00 0.00 0.00 3.69
2032 4781 1.446272 CGTTCGTGGCTTCCCTCTC 60.446 63.158 0.00 0.00 0.00 3.20
2033 4782 1.446272 GTTCGTGGCTTCCCTCTCG 60.446 63.158 0.00 0.00 0.00 4.04
2034 4783 3.296709 TTCGTGGCTTCCCTCTCGC 62.297 63.158 0.00 0.00 0.00 5.03
2035 4784 4.821589 CGTGGCTTCCCTCTCGCC 62.822 72.222 0.00 0.00 44.02 5.54
2036 4785 3.394836 GTGGCTTCCCTCTCGCCT 61.395 66.667 0.00 0.00 44.09 5.52
2037 4786 3.393970 TGGCTTCCCTCTCGCCTG 61.394 66.667 0.00 0.00 44.09 4.85
2038 4787 4.168291 GGCTTCCCTCTCGCCTGG 62.168 72.222 0.00 0.00 40.62 4.45
2039 4788 3.394836 GCTTCCCTCTCGCCTGGT 61.395 66.667 0.00 0.00 0.00 4.00
2040 4789 2.960688 GCTTCCCTCTCGCCTGGTT 61.961 63.158 0.00 0.00 0.00 3.67
2041 4790 1.679898 CTTCCCTCTCGCCTGGTTT 59.320 57.895 0.00 0.00 0.00 3.27
2042 4791 0.674895 CTTCCCTCTCGCCTGGTTTG 60.675 60.000 0.00 0.00 0.00 2.93
2043 4792 1.415672 TTCCCTCTCGCCTGGTTTGT 61.416 55.000 0.00 0.00 0.00 2.83
2044 4793 1.073199 CCCTCTCGCCTGGTTTGTT 59.927 57.895 0.00 0.00 0.00 2.83
2045 4794 0.537371 CCCTCTCGCCTGGTTTGTTT 60.537 55.000 0.00 0.00 0.00 2.83
2046 4795 0.875059 CCTCTCGCCTGGTTTGTTTC 59.125 55.000 0.00 0.00 0.00 2.78
2047 4796 1.543429 CCTCTCGCCTGGTTTGTTTCT 60.543 52.381 0.00 0.00 0.00 2.52
2048 4797 1.801178 CTCTCGCCTGGTTTGTTTCTC 59.199 52.381 0.00 0.00 0.00 2.87
2049 4798 1.416401 TCTCGCCTGGTTTGTTTCTCT 59.584 47.619 0.00 0.00 0.00 3.10
2050 4799 1.801178 CTCGCCTGGTTTGTTTCTCTC 59.199 52.381 0.00 0.00 0.00 3.20
2051 4800 0.875059 CGCCTGGTTTGTTTCTCTCC 59.125 55.000 0.00 0.00 0.00 3.71
2052 4801 1.813862 CGCCTGGTTTGTTTCTCTCCA 60.814 52.381 0.00 0.00 0.00 3.86
2053 4802 1.609072 GCCTGGTTTGTTTCTCTCCAC 59.391 52.381 0.00 0.00 0.00 4.02
2054 4803 2.930950 CCTGGTTTGTTTCTCTCCACA 58.069 47.619 0.00 0.00 0.00 4.17
2055 4804 2.618709 CCTGGTTTGTTTCTCTCCACAC 59.381 50.000 0.00 0.00 0.00 3.82
2056 4805 3.545703 CTGGTTTGTTTCTCTCCACACT 58.454 45.455 0.00 0.00 0.00 3.55
2057 4806 3.278574 TGGTTTGTTTCTCTCCACACTG 58.721 45.455 0.00 0.00 0.00 3.66
2058 4807 3.054728 TGGTTTGTTTCTCTCCACACTGA 60.055 43.478 0.00 0.00 0.00 3.41
2059 4808 3.312697 GGTTTGTTTCTCTCCACACTGAC 59.687 47.826 0.00 0.00 0.00 3.51
2060 4809 3.904800 TTGTTTCTCTCCACACTGACA 57.095 42.857 0.00 0.00 0.00 3.58
2061 4810 3.459232 TGTTTCTCTCCACACTGACAG 57.541 47.619 0.00 0.00 0.00 3.51
2062 4811 2.139118 GTTTCTCTCCACACTGACAGC 58.861 52.381 1.25 0.00 0.00 4.40
2063 4812 1.709578 TTCTCTCCACACTGACAGCT 58.290 50.000 1.25 0.00 0.00 4.24
2064 4813 1.252175 TCTCTCCACACTGACAGCTC 58.748 55.000 1.25 0.00 0.00 4.09
2065 4814 1.202989 TCTCTCCACACTGACAGCTCT 60.203 52.381 1.25 0.00 0.00 4.09
2066 4815 2.040412 TCTCTCCACACTGACAGCTCTA 59.960 50.000 1.25 0.00 0.00 2.43
2067 4816 2.163412 CTCTCCACACTGACAGCTCTAC 59.837 54.545 1.25 0.00 0.00 2.59
2068 4817 1.203523 CTCCACACTGACAGCTCTACC 59.796 57.143 1.25 0.00 0.00 3.18
2069 4818 1.203063 TCCACACTGACAGCTCTACCT 60.203 52.381 1.25 0.00 0.00 3.08
2070 4819 1.620819 CCACACTGACAGCTCTACCTT 59.379 52.381 1.25 0.00 0.00 3.50
2071 4820 2.353208 CCACACTGACAGCTCTACCTTC 60.353 54.545 1.25 0.00 0.00 3.46
2072 4821 1.542030 ACACTGACAGCTCTACCTTCG 59.458 52.381 1.25 0.00 0.00 3.79
2073 4822 1.542030 CACTGACAGCTCTACCTTCGT 59.458 52.381 1.25 0.00 0.00 3.85
2074 4823 2.029828 CACTGACAGCTCTACCTTCGTT 60.030 50.000 1.25 0.00 0.00 3.85
2075 4824 2.029828 ACTGACAGCTCTACCTTCGTTG 60.030 50.000 1.25 0.00 0.00 4.10
2076 4825 1.336887 TGACAGCTCTACCTTCGTTGC 60.337 52.381 0.00 0.00 0.00 4.17
2077 4826 0.037232 ACAGCTCTACCTTCGTTGCC 60.037 55.000 0.00 0.00 0.00 4.52
2078 4827 0.741221 CAGCTCTACCTTCGTTGCCC 60.741 60.000 0.00 0.00 0.00 5.36
2079 4828 1.449778 GCTCTACCTTCGTTGCCCC 60.450 63.158 0.00 0.00 0.00 5.80
2080 4829 1.900545 GCTCTACCTTCGTTGCCCCT 61.901 60.000 0.00 0.00 0.00 4.79
2081 4830 1.481871 CTCTACCTTCGTTGCCCCTA 58.518 55.000 0.00 0.00 0.00 3.53
2082 4831 1.136500 CTCTACCTTCGTTGCCCCTAC 59.864 57.143 0.00 0.00 0.00 3.18
2083 4832 0.179119 CTACCTTCGTTGCCCCTACG 60.179 60.000 0.00 0.00 40.23 3.51
2084 4833 0.611618 TACCTTCGTTGCCCCTACGA 60.612 55.000 0.00 0.00 45.34 3.43
2085 4834 1.447314 CCTTCGTTGCCCCTACGAC 60.447 63.158 0.00 0.00 46.50 4.34
2086 4835 1.290955 CTTCGTTGCCCCTACGACA 59.709 57.895 0.00 0.00 46.50 4.35
2087 4836 0.320073 CTTCGTTGCCCCTACGACAA 60.320 55.000 0.00 0.00 46.50 3.18
2088 4837 0.600782 TTCGTTGCCCCTACGACAAC 60.601 55.000 0.00 0.00 46.50 3.32
2089 4838 2.030958 CGTTGCCCCTACGACAACC 61.031 63.158 0.00 0.00 40.40 3.77
2090 4839 1.373812 GTTGCCCCTACGACAACCT 59.626 57.895 0.00 0.00 38.15 3.50
2091 4840 0.250597 GTTGCCCCTACGACAACCTT 60.251 55.000 0.00 0.00 38.15 3.50
2092 4841 0.035739 TTGCCCCTACGACAACCTTC 59.964 55.000 0.00 0.00 0.00 3.46
2093 4842 1.447314 GCCCCTACGACAACCTTCG 60.447 63.158 0.00 0.00 44.87 3.79
2100 4849 3.403276 CGACAACCTTCGTCTCTCC 57.597 57.895 0.00 0.00 34.16 3.71
2101 4850 0.109226 CGACAACCTTCGTCTCTCCC 60.109 60.000 0.00 0.00 34.16 4.30
2102 4851 0.109226 GACAACCTTCGTCTCTCCCG 60.109 60.000 0.00 0.00 0.00 5.14
2103 4852 0.826672 ACAACCTTCGTCTCTCCCGT 60.827 55.000 0.00 0.00 0.00 5.28
2104 4853 0.109226 CAACCTTCGTCTCTCCCGTC 60.109 60.000 0.00 0.00 0.00 4.79
2105 4854 0.251253 AACCTTCGTCTCTCCCGTCT 60.251 55.000 0.00 0.00 0.00 4.18
2106 4855 0.251253 ACCTTCGTCTCTCCCGTCTT 60.251 55.000 0.00 0.00 0.00 3.01
2107 4856 0.452585 CCTTCGTCTCTCCCGTCTTC 59.547 60.000 0.00 0.00 0.00 2.87
2108 4857 1.166129 CTTCGTCTCTCCCGTCTTCA 58.834 55.000 0.00 0.00 0.00 3.02
2109 4858 0.879765 TTCGTCTCTCCCGTCTTCAC 59.120 55.000 0.00 0.00 0.00 3.18
2110 4859 0.959372 TCGTCTCTCCCGTCTTCACC 60.959 60.000 0.00 0.00 0.00 4.02
2111 4860 0.961358 CGTCTCTCCCGTCTTCACCT 60.961 60.000 0.00 0.00 0.00 4.00
2112 4861 1.258676 GTCTCTCCCGTCTTCACCTT 58.741 55.000 0.00 0.00 0.00 3.50
2113 4862 1.619332 GTCTCTCCCGTCTTCACCTTT 59.381 52.381 0.00 0.00 0.00 3.11
2114 4863 1.893801 TCTCTCCCGTCTTCACCTTTC 59.106 52.381 0.00 0.00 0.00 2.62
2115 4864 0.974383 TCTCCCGTCTTCACCTTTCC 59.026 55.000 0.00 0.00 0.00 3.13
2116 4865 0.685097 CTCCCGTCTTCACCTTTCCA 59.315 55.000 0.00 0.00 0.00 3.53
2117 4866 0.395312 TCCCGTCTTCACCTTTCCAC 59.605 55.000 0.00 0.00 0.00 4.02
2118 4867 0.107831 CCCGTCTTCACCTTTCCACA 59.892 55.000 0.00 0.00 0.00 4.17
2119 4868 1.271379 CCCGTCTTCACCTTTCCACAT 60.271 52.381 0.00 0.00 0.00 3.21
2120 4869 1.806542 CCGTCTTCACCTTTCCACATG 59.193 52.381 0.00 0.00 0.00 3.21
2121 4870 1.197721 CGTCTTCACCTTTCCACATGC 59.802 52.381 0.00 0.00 0.00 4.06
2122 4871 2.229792 GTCTTCACCTTTCCACATGCA 58.770 47.619 0.00 0.00 0.00 3.96
2123 4872 2.821969 GTCTTCACCTTTCCACATGCAT 59.178 45.455 0.00 0.00 0.00 3.96
2124 4873 4.009675 GTCTTCACCTTTCCACATGCATA 58.990 43.478 0.00 0.00 0.00 3.14
2125 4874 4.641989 GTCTTCACCTTTCCACATGCATAT 59.358 41.667 0.00 0.00 0.00 1.78
2126 4875 4.883585 TCTTCACCTTTCCACATGCATATC 59.116 41.667 0.00 0.00 0.00 1.63
2127 4876 4.508551 TCACCTTTCCACATGCATATCT 57.491 40.909 0.00 0.00 0.00 1.98
2128 4877 4.858850 TCACCTTTCCACATGCATATCTT 58.141 39.130 0.00 0.00 0.00 2.40
2129 4878 4.641541 TCACCTTTCCACATGCATATCTTG 59.358 41.667 0.00 0.00 0.00 3.02
2130 4879 4.641541 CACCTTTCCACATGCATATCTTGA 59.358 41.667 0.00 0.00 0.00 3.02
2131 4880 4.885907 ACCTTTCCACATGCATATCTTGAG 59.114 41.667 0.00 0.00 0.00 3.02
2132 4881 4.261489 CCTTTCCACATGCATATCTTGAGC 60.261 45.833 0.00 0.00 0.00 4.26
2133 4882 3.851458 TCCACATGCATATCTTGAGCT 57.149 42.857 0.00 0.00 0.00 4.09
2134 4883 3.736720 TCCACATGCATATCTTGAGCTC 58.263 45.455 6.82 6.82 0.00 4.09
2135 4884 2.812591 CCACATGCATATCTTGAGCTCC 59.187 50.000 12.15 0.00 0.00 4.70
2136 4885 2.812591 CACATGCATATCTTGAGCTCCC 59.187 50.000 12.15 0.00 0.00 4.30
2137 4886 2.709934 ACATGCATATCTTGAGCTCCCT 59.290 45.455 12.15 0.00 0.00 4.20
2138 4887 3.244491 ACATGCATATCTTGAGCTCCCTC 60.244 47.826 12.15 0.00 38.62 4.30
2139 4888 2.687297 TGCATATCTTGAGCTCCCTCT 58.313 47.619 12.15 0.00 38.93 3.69
2140 4889 2.632028 TGCATATCTTGAGCTCCCTCTC 59.368 50.000 12.15 0.00 38.93 3.20
2141 4890 2.028203 GCATATCTTGAGCTCCCTCTCC 60.028 54.545 12.15 0.00 38.93 3.71
2142 4891 3.509442 CATATCTTGAGCTCCCTCTCCT 58.491 50.000 12.15 0.00 38.93 3.69
2143 4892 1.792115 ATCTTGAGCTCCCTCTCCTG 58.208 55.000 12.15 0.00 38.93 3.86
2144 4893 0.411452 TCTTGAGCTCCCTCTCCTGT 59.589 55.000 12.15 0.00 38.93 4.00
2145 4894 0.823460 CTTGAGCTCCCTCTCCTGTC 59.177 60.000 12.15 0.00 38.93 3.51
2146 4895 0.967887 TTGAGCTCCCTCTCCTGTCG 60.968 60.000 12.15 0.00 38.93 4.35
2147 4896 1.077357 GAGCTCCCTCTCCTGTCGA 60.077 63.158 0.87 0.00 35.16 4.20
2148 4897 0.467290 GAGCTCCCTCTCCTGTCGAT 60.467 60.000 0.87 0.00 35.16 3.59
2149 4898 0.847373 AGCTCCCTCTCCTGTCGATA 59.153 55.000 0.00 0.00 0.00 2.92
2150 4899 1.215673 AGCTCCCTCTCCTGTCGATAA 59.784 52.381 0.00 0.00 0.00 1.75
2151 4900 2.032620 GCTCCCTCTCCTGTCGATAAA 58.967 52.381 0.00 0.00 0.00 1.40
2152 4901 2.431057 GCTCCCTCTCCTGTCGATAAAA 59.569 50.000 0.00 0.00 0.00 1.52
2153 4902 3.738590 GCTCCCTCTCCTGTCGATAAAAC 60.739 52.174 0.00 0.00 0.00 2.43
2154 4903 3.702045 CTCCCTCTCCTGTCGATAAAACT 59.298 47.826 0.00 0.00 0.00 2.66
2155 4904 4.094476 TCCCTCTCCTGTCGATAAAACTT 58.906 43.478 0.00 0.00 0.00 2.66
2156 4905 4.159879 TCCCTCTCCTGTCGATAAAACTTC 59.840 45.833 0.00 0.00 0.00 3.01
2157 4906 4.434520 CCTCTCCTGTCGATAAAACTTCC 58.565 47.826 0.00 0.00 0.00 3.46
2158 4907 4.434520 CTCTCCTGTCGATAAAACTTCCC 58.565 47.826 0.00 0.00 0.00 3.97
2159 4908 4.094476 TCTCCTGTCGATAAAACTTCCCT 58.906 43.478 0.00 0.00 0.00 4.20
2160 4909 4.159879 TCTCCTGTCGATAAAACTTCCCTC 59.840 45.833 0.00 0.00 0.00 4.30
2161 4910 3.197116 TCCTGTCGATAAAACTTCCCTCC 59.803 47.826 0.00 0.00 0.00 4.30
2162 4911 3.055385 CCTGTCGATAAAACTTCCCTCCA 60.055 47.826 0.00 0.00 0.00 3.86
2163 4912 3.933332 CTGTCGATAAAACTTCCCTCCAC 59.067 47.826 0.00 0.00 0.00 4.02
2164 4913 3.268330 GTCGATAAAACTTCCCTCCACC 58.732 50.000 0.00 0.00 0.00 4.61
2165 4914 2.093869 TCGATAAAACTTCCCTCCACCG 60.094 50.000 0.00 0.00 0.00 4.94
2166 4915 2.014857 GATAAAACTTCCCTCCACCGC 58.985 52.381 0.00 0.00 0.00 5.68
2167 4916 0.037160 TAAAACTTCCCTCCACCGCC 59.963 55.000 0.00 0.00 0.00 6.13
2168 4917 1.716028 AAAACTTCCCTCCACCGCCT 61.716 55.000 0.00 0.00 0.00 5.52
2169 4918 1.716028 AAACTTCCCTCCACCGCCTT 61.716 55.000 0.00 0.00 0.00 4.35
2170 4919 2.125766 AACTTCCCTCCACCGCCTTC 62.126 60.000 0.00 0.00 0.00 3.46
2171 4920 3.327404 TTCCCTCCACCGCCTTCC 61.327 66.667 0.00 0.00 0.00 3.46
2172 4921 4.649705 TCCCTCCACCGCCTTCCA 62.650 66.667 0.00 0.00 0.00 3.53
2173 4922 3.646715 CCCTCCACCGCCTTCCAA 61.647 66.667 0.00 0.00 0.00 3.53
2174 4923 2.359975 CCTCCACCGCCTTCCAAC 60.360 66.667 0.00 0.00 0.00 3.77
2175 4924 2.359975 CTCCACCGCCTTCCAACC 60.360 66.667 0.00 0.00 0.00 3.77
2176 4925 3.920093 CTCCACCGCCTTCCAACCC 62.920 68.421 0.00 0.00 0.00 4.11
2177 4926 4.278513 CCACCGCCTTCCAACCCA 62.279 66.667 0.00 0.00 0.00 4.51
2178 4927 2.983592 CACCGCCTTCCAACCCAC 60.984 66.667 0.00 0.00 0.00 4.61
2179 4928 4.280019 ACCGCCTTCCAACCCACC 62.280 66.667 0.00 0.00 0.00 4.61
2180 4929 3.966543 CCGCCTTCCAACCCACCT 61.967 66.667 0.00 0.00 0.00 4.00
2181 4930 2.359975 CGCCTTCCAACCCACCTC 60.360 66.667 0.00 0.00 0.00 3.85
2182 4931 2.895424 CGCCTTCCAACCCACCTCT 61.895 63.158 0.00 0.00 0.00 3.69
2183 4932 1.002011 GCCTTCCAACCCACCTCTC 60.002 63.158 0.00 0.00 0.00 3.20
2184 4933 1.685820 CCTTCCAACCCACCTCTCC 59.314 63.158 0.00 0.00 0.00 3.71
2185 4934 1.296715 CTTCCAACCCACCTCTCCG 59.703 63.158 0.00 0.00 0.00 4.63
2186 4935 2.185310 CTTCCAACCCACCTCTCCGG 62.185 65.000 0.00 0.00 39.35 5.14
2187 4936 2.606519 CCAACCCACCTCTCCGGA 60.607 66.667 2.93 2.93 36.31 5.14
2188 4937 1.995626 CCAACCCACCTCTCCGGAT 60.996 63.158 3.57 0.00 36.31 4.18
2189 4938 1.221840 CAACCCACCTCTCCGGATG 59.778 63.158 3.57 0.00 36.31 3.51
2190 4939 1.995626 AACCCACCTCTCCGGATGG 60.996 63.158 18.70 18.70 35.17 3.51
2191 4940 3.164269 CCCACCTCTCCGGATGGG 61.164 72.222 23.35 23.35 43.25 4.00
2192 4941 2.365635 CCACCTCTCCGGATGGGT 60.366 66.667 22.59 20.88 37.00 4.51
2193 4942 2.735772 CCACCTCTCCGGATGGGTG 61.736 68.421 32.24 32.24 46.07 4.61
2194 4943 2.365635 ACCTCTCCGGATGGGTGG 60.366 66.667 22.57 15.73 37.00 4.61
2195 4944 2.365635 CCTCTCCGGATGGGTGGT 60.366 66.667 3.57 0.00 37.00 4.16
2196 4945 2.735772 CCTCTCCGGATGGGTGGTG 61.736 68.421 3.57 0.00 37.00 4.17
2197 4946 1.685765 CTCTCCGGATGGGTGGTGA 60.686 63.158 3.57 0.00 37.00 4.02
2198 4947 1.680522 CTCTCCGGATGGGTGGTGAG 61.681 65.000 3.57 0.95 38.91 3.51
2199 4948 2.687200 TCCGGATGGGTGGTGAGG 60.687 66.667 0.00 0.00 37.00 3.86
2200 4949 4.489771 CCGGATGGGTGGTGAGGC 62.490 72.222 0.00 0.00 0.00 4.70
2201 4950 3.402681 CGGATGGGTGGTGAGGCT 61.403 66.667 0.00 0.00 0.00 4.58
2202 4951 2.971598 CGGATGGGTGGTGAGGCTT 61.972 63.158 0.00 0.00 0.00 4.35
2203 4952 1.077429 GGATGGGTGGTGAGGCTTC 60.077 63.158 0.00 0.00 0.00 3.86
2204 4953 1.566298 GGATGGGTGGTGAGGCTTCT 61.566 60.000 0.00 0.00 0.00 2.85
2205 4954 0.107459 GATGGGTGGTGAGGCTTCTC 60.107 60.000 0.00 0.00 38.00 2.87
2206 4955 0.842030 ATGGGTGGTGAGGCTTCTCA 60.842 55.000 0.00 0.00 44.52 3.27
2207 4956 1.298014 GGGTGGTGAGGCTTCTCAG 59.702 63.158 0.00 0.00 46.98 3.35
2208 4957 1.484444 GGGTGGTGAGGCTTCTCAGT 61.484 60.000 0.00 0.00 46.98 3.41
2209 4958 0.036858 GGTGGTGAGGCTTCTCAGTC 60.037 60.000 0.00 0.00 46.98 3.51
2210 4959 0.681733 GTGGTGAGGCTTCTCAGTCA 59.318 55.000 0.00 0.00 46.98 3.41
2211 4960 1.277557 GTGGTGAGGCTTCTCAGTCAT 59.722 52.381 0.00 0.00 46.98 3.06
2212 4961 1.277273 TGGTGAGGCTTCTCAGTCATG 59.723 52.381 0.00 0.00 46.98 3.07
2213 4962 1.552337 GGTGAGGCTTCTCAGTCATGA 59.448 52.381 0.00 0.00 46.98 3.07
2214 4963 2.170187 GGTGAGGCTTCTCAGTCATGAT 59.830 50.000 0.00 0.00 46.98 2.45
2215 4964 3.196463 GTGAGGCTTCTCAGTCATGATG 58.804 50.000 0.00 0.00 46.98 3.07
2216 4965 2.211806 GAGGCTTCTCAGTCATGATGC 58.788 52.381 0.00 0.00 37.47 3.91
2217 4966 1.838715 AGGCTTCTCAGTCATGATGCT 59.161 47.619 0.00 0.00 34.12 3.79
2218 4967 3.036819 AGGCTTCTCAGTCATGATGCTA 58.963 45.455 0.00 0.00 34.12 3.49
2219 4968 3.069872 AGGCTTCTCAGTCATGATGCTAG 59.930 47.826 0.00 0.00 34.12 3.42
2220 4969 3.069300 GGCTTCTCAGTCATGATGCTAGA 59.931 47.826 0.00 0.00 34.12 2.43
2221 4970 4.050553 GCTTCTCAGTCATGATGCTAGAC 58.949 47.826 0.00 0.00 34.12 2.59
2222 4971 4.202141 GCTTCTCAGTCATGATGCTAGACT 60.202 45.833 0.00 0.00 42.97 3.24
2223 4972 5.512753 TTCTCAGTCATGATGCTAGACTC 57.487 43.478 0.00 0.00 40.42 3.36
2224 4973 4.530875 TCTCAGTCATGATGCTAGACTCA 58.469 43.478 0.00 0.00 40.42 3.41
2225 4974 4.337836 TCTCAGTCATGATGCTAGACTCAC 59.662 45.833 0.00 0.00 40.42 3.51
2226 4975 4.276642 TCAGTCATGATGCTAGACTCACT 58.723 43.478 0.00 0.00 40.42 3.41
2227 4976 4.708909 TCAGTCATGATGCTAGACTCACTT 59.291 41.667 0.00 0.00 40.42 3.16
2228 4977 5.186603 TCAGTCATGATGCTAGACTCACTTT 59.813 40.000 0.00 0.00 40.42 2.66
2229 4978 5.291371 CAGTCATGATGCTAGACTCACTTTG 59.709 44.000 0.00 0.00 40.42 2.77
2230 4979 4.033817 GTCATGATGCTAGACTCACTTTGC 59.966 45.833 0.00 0.00 0.00 3.68
2231 4980 3.969287 TGATGCTAGACTCACTTTGCT 57.031 42.857 0.00 0.00 0.00 3.91
2232 4981 3.854666 TGATGCTAGACTCACTTTGCTC 58.145 45.455 0.00 0.00 0.00 4.26
2233 4982 3.513119 TGATGCTAGACTCACTTTGCTCT 59.487 43.478 0.00 0.00 0.00 4.09
2234 4983 3.584406 TGCTAGACTCACTTTGCTCTC 57.416 47.619 0.00 0.00 0.00 3.20
2235 4984 2.893489 TGCTAGACTCACTTTGCTCTCA 59.107 45.455 0.00 0.00 0.00 3.27
2236 4985 3.513119 TGCTAGACTCACTTTGCTCTCAT 59.487 43.478 0.00 0.00 0.00 2.90
2237 4986 4.111916 GCTAGACTCACTTTGCTCTCATC 58.888 47.826 0.00 0.00 0.00 2.92
2238 4987 3.608316 AGACTCACTTTGCTCTCATCC 57.392 47.619 0.00 0.00 0.00 3.51
2239 4988 2.094286 AGACTCACTTTGCTCTCATCCG 60.094 50.000 0.00 0.00 0.00 4.18
2240 4989 1.066573 ACTCACTTTGCTCTCATCCGG 60.067 52.381 0.00 0.00 0.00 5.14
2241 4990 0.391661 TCACTTTGCTCTCATCCGGC 60.392 55.000 0.00 0.00 0.00 6.13
2242 4991 1.078143 ACTTTGCTCTCATCCGGCC 60.078 57.895 0.00 0.00 0.00 6.13
2243 4992 1.222936 CTTTGCTCTCATCCGGCCT 59.777 57.895 0.00 0.00 0.00 5.19
2244 4993 0.393537 CTTTGCTCTCATCCGGCCTT 60.394 55.000 0.00 0.00 0.00 4.35
2245 4994 0.392998 TTTGCTCTCATCCGGCCTTC 60.393 55.000 0.00 0.00 0.00 3.46
2246 4995 1.552799 TTGCTCTCATCCGGCCTTCA 61.553 55.000 0.00 0.00 0.00 3.02
2247 4996 1.522580 GCTCTCATCCGGCCTTCAC 60.523 63.158 0.00 0.00 0.00 3.18
2248 4997 1.965754 GCTCTCATCCGGCCTTCACT 61.966 60.000 0.00 0.00 0.00 3.41
2249 4998 0.103937 CTCTCATCCGGCCTTCACTC 59.896 60.000 0.00 0.00 0.00 3.51
2250 4999 0.614697 TCTCATCCGGCCTTCACTCA 60.615 55.000 0.00 0.00 0.00 3.41
2251 5000 0.460987 CTCATCCGGCCTTCACTCAC 60.461 60.000 0.00 0.00 0.00 3.51
2252 5001 0.904865 TCATCCGGCCTTCACTCACT 60.905 55.000 0.00 0.00 0.00 3.41
2253 5002 0.460987 CATCCGGCCTTCACTCACTC 60.461 60.000 0.00 0.00 0.00 3.51
2254 5003 0.904865 ATCCGGCCTTCACTCACTCA 60.905 55.000 0.00 0.00 0.00 3.41
2255 5004 1.374758 CCGGCCTTCACTCACTCAC 60.375 63.158 0.00 0.00 0.00 3.51
2256 5005 1.668294 CGGCCTTCACTCACTCACT 59.332 57.895 0.00 0.00 0.00 3.41
2257 5006 0.034059 CGGCCTTCACTCACTCACTT 59.966 55.000 0.00 0.00 0.00 3.16
2258 5007 1.802069 GGCCTTCACTCACTCACTTC 58.198 55.000 0.00 0.00 0.00 3.01
2259 5008 1.070758 GGCCTTCACTCACTCACTTCA 59.929 52.381 0.00 0.00 0.00 3.02
2260 5009 2.289945 GGCCTTCACTCACTCACTTCAT 60.290 50.000 0.00 0.00 0.00 2.57
2261 5010 2.740981 GCCTTCACTCACTCACTTCATG 59.259 50.000 0.00 0.00 0.00 3.07
2262 5011 3.805108 GCCTTCACTCACTCACTTCATGT 60.805 47.826 0.00 0.00 0.00 3.21
2263 5012 3.993081 CCTTCACTCACTCACTTCATGTC 59.007 47.826 0.00 0.00 0.00 3.06
2264 5013 4.262377 CCTTCACTCACTCACTTCATGTCT 60.262 45.833 0.00 0.00 0.00 3.41
2265 5014 4.248691 TCACTCACTCACTTCATGTCTG 57.751 45.455 0.00 0.00 0.00 3.51
2266 5015 3.638627 TCACTCACTCACTTCATGTCTGT 59.361 43.478 0.00 0.00 0.00 3.41
2267 5016 3.986572 CACTCACTCACTTCATGTCTGTC 59.013 47.826 0.00 0.00 0.00 3.51
2268 5017 3.894427 ACTCACTCACTTCATGTCTGTCT 59.106 43.478 0.00 0.00 0.00 3.41
2269 5018 4.343526 ACTCACTCACTTCATGTCTGTCTT 59.656 41.667 0.00 0.00 0.00 3.01
2270 5019 5.163364 ACTCACTCACTTCATGTCTGTCTTT 60.163 40.000 0.00 0.00 0.00 2.52
2271 5020 5.292765 TCACTCACTTCATGTCTGTCTTTC 58.707 41.667 0.00 0.00 0.00 2.62
2272 5021 4.149571 CACTCACTTCATGTCTGTCTTTCG 59.850 45.833 0.00 0.00 0.00 3.46
2273 5022 3.059884 TCACTTCATGTCTGTCTTTCGC 58.940 45.455 0.00 0.00 0.00 4.70
2274 5023 2.158449 CACTTCATGTCTGTCTTTCGCC 59.842 50.000 0.00 0.00 0.00 5.54
2275 5024 2.037772 ACTTCATGTCTGTCTTTCGCCT 59.962 45.455 0.00 0.00 0.00 5.52
2276 5025 2.370281 TCATGTCTGTCTTTCGCCTC 57.630 50.000 0.00 0.00 0.00 4.70
2277 5026 1.066858 TCATGTCTGTCTTTCGCCTCC 60.067 52.381 0.00 0.00 0.00 4.30
2278 5027 0.250513 ATGTCTGTCTTTCGCCTCCC 59.749 55.000 0.00 0.00 0.00 4.30
2279 5028 1.079057 GTCTGTCTTTCGCCTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
2280 5029 1.535444 TCTGTCTTTCGCCTCCCCA 60.535 57.895 0.00 0.00 0.00 4.96
2281 5030 1.125093 TCTGTCTTTCGCCTCCCCAA 61.125 55.000 0.00 0.00 0.00 4.12
2282 5031 0.250727 CTGTCTTTCGCCTCCCCAAA 60.251 55.000 0.00 0.00 0.00 3.28
2283 5032 0.183971 TGTCTTTCGCCTCCCCAAAA 59.816 50.000 0.00 0.00 0.00 2.44
2284 5033 1.324383 GTCTTTCGCCTCCCCAAAAA 58.676 50.000 0.00 0.00 0.00 1.94
2304 5053 5.573337 AAAATCCTGAAACAGCTAGATGC 57.427 39.130 8.16 0.00 43.29 3.91
2321 5070 3.279183 CGACCCGCAGAGTCTTCT 58.721 61.111 0.00 0.00 31.17 2.85
2322 5071 1.587054 CGACCCGCAGAGTCTTCTT 59.413 57.895 0.00 0.00 31.17 2.52
2323 5072 0.456995 CGACCCGCAGAGTCTTCTTC 60.457 60.000 0.00 0.00 31.17 2.87
2324 5073 0.892063 GACCCGCAGAGTCTTCTTCT 59.108 55.000 0.00 0.00 30.51 2.85
2325 5074 2.093106 GACCCGCAGAGTCTTCTTCTA 58.907 52.381 0.00 0.00 30.51 2.10
2326 5075 2.096248 ACCCGCAGAGTCTTCTTCTAG 58.904 52.381 0.00 0.00 0.00 2.43
2327 5076 1.407258 CCCGCAGAGTCTTCTTCTAGG 59.593 57.143 0.00 0.00 0.00 3.02
2328 5077 2.096248 CCGCAGAGTCTTCTTCTAGGT 58.904 52.381 0.00 0.00 0.00 3.08
2329 5078 2.494073 CCGCAGAGTCTTCTTCTAGGTT 59.506 50.000 0.00 0.00 0.00 3.50
2330 5079 3.506810 CGCAGAGTCTTCTTCTAGGTTG 58.493 50.000 0.00 0.00 0.00 3.77
2331 5080 3.191581 CGCAGAGTCTTCTTCTAGGTTGA 59.808 47.826 0.00 0.00 0.00 3.18
2332 5081 4.490743 GCAGAGTCTTCTTCTAGGTTGAC 58.509 47.826 0.00 0.00 0.00 3.18
2333 5082 4.619628 GCAGAGTCTTCTTCTAGGTTGACC 60.620 50.000 0.00 0.00 0.00 4.02
2334 5083 4.524714 CAGAGTCTTCTTCTAGGTTGACCA 59.475 45.833 2.56 0.00 38.89 4.02
2335 5084 5.011125 CAGAGTCTTCTTCTAGGTTGACCAA 59.989 44.000 2.56 0.00 38.89 3.67
2336 5085 5.245075 AGAGTCTTCTTCTAGGTTGACCAAG 59.755 44.000 2.56 0.00 38.89 3.61
2337 5086 5.148502 AGTCTTCTTCTAGGTTGACCAAGA 58.851 41.667 2.56 0.54 38.89 3.02
2338 5087 5.602978 AGTCTTCTTCTAGGTTGACCAAGAA 59.397 40.000 11.44 11.44 34.89 2.52
2339 5088 6.099845 AGTCTTCTTCTAGGTTGACCAAGAAA 59.900 38.462 12.46 4.97 36.06 2.52
2340 5089 6.203145 GTCTTCTTCTAGGTTGACCAAGAAAC 59.797 42.308 12.46 10.43 36.06 2.78
2341 5090 5.623956 TCTTCTAGGTTGACCAAGAAACA 57.376 39.130 2.56 0.00 38.89 2.83
2342 5091 6.187727 TCTTCTAGGTTGACCAAGAAACAT 57.812 37.500 2.56 0.00 38.89 2.71
2343 5092 5.997746 TCTTCTAGGTTGACCAAGAAACATG 59.002 40.000 2.56 0.00 38.89 3.21
2344 5093 4.072131 TCTAGGTTGACCAAGAAACATGC 58.928 43.478 2.56 0.00 38.89 4.06
2345 5094 2.665165 AGGTTGACCAAGAAACATGCA 58.335 42.857 2.56 0.00 38.89 3.96
2346 5095 2.362077 AGGTTGACCAAGAAACATGCAC 59.638 45.455 2.56 0.00 38.89 4.57
2347 5096 2.100584 GGTTGACCAAGAAACATGCACA 59.899 45.455 0.00 0.00 35.64 4.57
2348 5097 3.430098 GGTTGACCAAGAAACATGCACAA 60.430 43.478 0.00 0.00 35.64 3.33
2349 5098 3.713858 TGACCAAGAAACATGCACAAG 57.286 42.857 0.00 0.00 0.00 3.16
2350 5099 2.361757 TGACCAAGAAACATGCACAAGG 59.638 45.455 0.00 0.00 0.00 3.61
2351 5100 1.688197 ACCAAGAAACATGCACAAGGG 59.312 47.619 0.00 0.00 0.00 3.95
2352 5101 1.606224 CCAAGAAACATGCACAAGGGC 60.606 52.381 0.00 0.00 0.00 5.19
2353 5102 1.342174 CAAGAAACATGCACAAGGGCT 59.658 47.619 0.00 0.00 34.04 5.19
2354 5103 2.557924 CAAGAAACATGCACAAGGGCTA 59.442 45.455 0.00 0.00 34.04 3.93
2355 5104 2.875296 AGAAACATGCACAAGGGCTAA 58.125 42.857 0.00 0.00 34.04 3.09
2356 5105 2.821969 AGAAACATGCACAAGGGCTAAG 59.178 45.455 0.00 0.00 34.04 2.18
2357 5106 2.292828 AACATGCACAAGGGCTAAGT 57.707 45.000 0.00 0.00 34.04 2.24
2358 5107 1.538047 ACATGCACAAGGGCTAAGTG 58.462 50.000 0.00 0.00 36.39 3.16
2359 5108 1.202927 ACATGCACAAGGGCTAAGTGT 60.203 47.619 0.00 0.00 35.75 3.55
2360 5109 2.039746 ACATGCACAAGGGCTAAGTGTA 59.960 45.455 0.00 0.00 35.75 2.90
2361 5110 3.282021 CATGCACAAGGGCTAAGTGTAT 58.718 45.455 0.00 0.00 38.78 2.29
2362 5111 3.433306 TGCACAAGGGCTAAGTGTATT 57.567 42.857 0.00 0.00 35.75 1.89
2363 5112 4.561500 TGCACAAGGGCTAAGTGTATTA 57.438 40.909 0.00 0.00 35.75 0.98
2364 5113 5.110814 TGCACAAGGGCTAAGTGTATTAT 57.889 39.130 0.00 0.00 35.75 1.28
2365 5114 5.505780 TGCACAAGGGCTAAGTGTATTATT 58.494 37.500 0.00 0.00 35.75 1.40
2366 5115 5.949354 TGCACAAGGGCTAAGTGTATTATTT 59.051 36.000 0.00 0.00 35.75 1.40
2367 5116 6.094881 TGCACAAGGGCTAAGTGTATTATTTC 59.905 38.462 0.00 0.00 35.75 2.17
2368 5117 6.318900 GCACAAGGGCTAAGTGTATTATTTCT 59.681 38.462 0.00 0.00 35.75 2.52
2369 5118 7.148069 GCACAAGGGCTAAGTGTATTATTTCTT 60.148 37.037 0.00 0.00 35.75 2.52
2370 5119 8.398665 CACAAGGGCTAAGTGTATTATTTCTTC 58.601 37.037 0.00 0.00 0.00 2.87
2371 5120 7.280205 ACAAGGGCTAAGTGTATTATTTCTTCG 59.720 37.037 0.00 0.00 0.00 3.79
2372 5121 7.120923 AGGGCTAAGTGTATTATTTCTTCGA 57.879 36.000 0.00 0.00 0.00 3.71
2373 5122 7.562135 AGGGCTAAGTGTATTATTTCTTCGAA 58.438 34.615 0.00 0.00 0.00 3.71
2374 5123 8.044908 AGGGCTAAGTGTATTATTTCTTCGAAA 58.955 33.333 0.00 0.00 0.00 3.46
2375 5124 8.671028 GGGCTAAGTGTATTATTTCTTCGAAAA 58.329 33.333 0.00 0.00 0.00 2.29
2382 5131 9.937577 GTGTATTATTTCTTCGAAAATGTTTGC 57.062 29.630 0.00 0.00 31.50 3.68
2383 5132 9.684448 TGTATTATTTCTTCGAAAATGTTTGCA 57.316 25.926 0.00 0.00 31.50 4.08
2386 5135 9.862585 ATTATTTCTTCGAAAATGTTTGCAAAC 57.137 25.926 30.95 30.95 39.33 2.93
2413 5162 8.943594 AAAAATAATGGTGGTCTAGGTGTTAA 57.056 30.769 0.00 0.00 0.00 2.01
2414 5163 8.943594 AAAATAATGGTGGTCTAGGTGTTAAA 57.056 30.769 0.00 0.00 0.00 1.52
2415 5164 8.943594 AAATAATGGTGGTCTAGGTGTTAAAA 57.056 30.769 0.00 0.00 0.00 1.52
2416 5165 7.933215 ATAATGGTGGTCTAGGTGTTAAAAC 57.067 36.000 0.00 0.00 0.00 2.43
2417 5166 4.089408 TGGTGGTCTAGGTGTTAAAACC 57.911 45.455 6.72 6.72 40.85 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.067071 ACAAGTAGAGCTACGCCCAAC 60.067 52.381 2.28 0.00 40.80 3.77
64 65 1.268899 CTCCCGTTTGTAGTGACGAGT 59.731 52.381 0.00 0.00 41.53 4.18
77 78 1.597461 GGTAAGCAGAGCTCCCGTT 59.403 57.895 10.93 3.65 38.25 4.44
294 300 2.468301 TCCCATCTCTCTCCTCCTTG 57.532 55.000 0.00 0.00 0.00 3.61
322 328 2.114670 GTGGCCCACATGTCATCCG 61.115 63.158 9.55 0.00 34.08 4.18
391 397 2.127758 GCGACGGAACACAAAGCG 60.128 61.111 0.00 0.00 0.00 4.68
405 411 0.674269 GGTTGTATTTGGGTCGGCGA 60.674 55.000 4.99 4.99 0.00 5.54
478 495 5.425630 GGACAAAATAGACTACCCAATCGT 58.574 41.667 0.00 0.00 0.00 3.73
481 498 4.196971 GCGGACAAAATAGACTACCCAAT 58.803 43.478 0.00 0.00 0.00 3.16
509 526 0.462225 TCCGCCTGTGTTCGTTTTGA 60.462 50.000 0.00 0.00 0.00 2.69
511 528 0.591170 CATCCGCCTGTGTTCGTTTT 59.409 50.000 0.00 0.00 0.00 2.43
517 534 1.176527 CCATTTCATCCGCCTGTGTT 58.823 50.000 0.00 0.00 0.00 3.32
520 537 0.394352 GACCCATTTCATCCGCCTGT 60.394 55.000 0.00 0.00 0.00 4.00
571 588 3.738791 TGCTACAGTGTGTCGTGTATTTG 59.261 43.478 5.88 0.00 0.00 2.32
612 631 0.035036 TCACCGGCCAAATCGTAACA 59.965 50.000 0.00 0.00 0.00 2.41
617 636 0.808125 TTCATTCACCGGCCAAATCG 59.192 50.000 0.00 0.00 0.00 3.34
624 643 1.609208 AGCCATATTCATTCACCGGC 58.391 50.000 0.00 0.00 38.36 6.13
652 671 1.159285 CACAGACGGAATGCACATGT 58.841 50.000 0.00 0.00 0.00 3.21
667 686 7.097192 TGTAGTAAATTAAGGAGTCAGCACAG 58.903 38.462 0.00 0.00 0.00 3.66
679 698 5.295787 TGCCCGCATCTTGTAGTAAATTAAG 59.704 40.000 0.00 0.00 0.00 1.85
756 775 8.773645 TCGATCGATGCATCTTGTAAATAAATT 58.226 29.630 23.73 0.00 0.00 1.82
757 776 8.223769 GTCGATCGATGCATCTTGTAAATAAAT 58.776 33.333 22.50 2.75 0.00 1.40
758 777 7.307160 GGTCGATCGATGCATCTTGTAAATAAA 60.307 37.037 22.50 0.00 0.00 1.40
792 815 1.290955 CTCGTTCCTTACCGTGCCA 59.709 57.895 0.00 0.00 0.00 4.92
853 877 3.701454 AGGTCTTCCTCGGTGCTC 58.299 61.111 0.00 0.00 40.58 4.26
864 888 0.984995 GCTTACCCTGTGGAGGTCTT 59.015 55.000 0.00 0.00 38.89 3.01
936 960 1.268743 GGTATATATACGCCGGGTCGC 60.269 57.143 15.15 0.00 34.11 5.19
961 985 1.300971 GCTTGGTCGCAGCATCTCAA 61.301 55.000 0.00 0.00 37.22 3.02
971 995 3.882025 CTGGAGAAGCTTGGTCGC 58.118 61.111 2.10 0.00 0.00 5.19
1020 1044 0.823460 CTGGAGCTGAGGTTCTCTCC 59.177 60.000 0.00 0.00 44.04 3.71
1023 1047 0.534873 GGTCTGGAGCTGAGGTTCTC 59.465 60.000 0.00 0.00 0.00 2.87
1024 1048 1.254284 CGGTCTGGAGCTGAGGTTCT 61.254 60.000 0.00 0.00 0.00 3.01
1060 1084 1.134159 CATTGAGCTGAAGGAGGAGGG 60.134 57.143 0.00 0.00 0.00 4.30
1074 1098 3.947834 GGTGGTGGTTATTCTCCATTGAG 59.052 47.826 0.00 0.00 40.17 3.02
1626 3004 7.429340 GCGTTGAATGAAGGATACAGTAAATTG 59.571 37.037 0.00 0.00 41.41 2.32
1656 3038 4.347876 TGGTCAGAGGAAGAAGATGAACAA 59.652 41.667 0.00 0.00 34.81 2.83
1691 3406 0.469144 GAGGAGAGGCAGAGTAGGGG 60.469 65.000 0.00 0.00 0.00 4.79
1693 3408 0.260230 TGGAGGAGAGGCAGAGTAGG 59.740 60.000 0.00 0.00 0.00 3.18
1748 3473 1.743252 GTGCAGCCCCGAAGAGAAG 60.743 63.158 0.00 0.00 0.00 2.85
1750 3475 2.293318 ATGTGCAGCCCCGAAGAGA 61.293 57.895 0.00 0.00 0.00 3.10
1769 4516 2.417936 GGCGGGAGTCGAATCCTC 59.582 66.667 29.13 20.59 42.43 3.71
1842 4589 0.036765 GTCTGGTCGCCATGTACCAA 60.037 55.000 11.61 3.08 44.92 3.67
1870 4617 3.507162 TTCTCAGCAATGGACCTTTCA 57.493 42.857 0.00 0.00 0.00 2.69
1885 4632 4.402474 TCCGCTGAGTAGATGAAATTCTCA 59.598 41.667 0.00 0.00 38.81 3.27
1901 4648 3.695830 ACAATTAAGAAGGTCCGCTGA 57.304 42.857 0.00 0.00 0.00 4.26
1903 4650 2.488153 GCAACAATTAAGAAGGTCCGCT 59.512 45.455 0.00 0.00 0.00 5.52
1975 4724 3.244596 GGGAATCCCAGCTAACATAGTCC 60.245 52.174 14.67 0.00 44.65 3.85
1991 4740 4.787135 AAAGAATGGAGAGGAGGGAATC 57.213 45.455 0.00 0.00 0.00 2.52
1992 4741 4.384647 CGAAAAGAATGGAGAGGAGGGAAT 60.385 45.833 0.00 0.00 0.00 3.01
1993 4742 3.055094 CGAAAAGAATGGAGAGGAGGGAA 60.055 47.826 0.00 0.00 0.00 3.97
1994 4743 2.501723 CGAAAAGAATGGAGAGGAGGGA 59.498 50.000 0.00 0.00 0.00 4.20
1995 4744 2.237392 ACGAAAAGAATGGAGAGGAGGG 59.763 50.000 0.00 0.00 0.00 4.30
1996 4745 3.618690 ACGAAAAGAATGGAGAGGAGG 57.381 47.619 0.00 0.00 0.00 4.30
1997 4746 3.614616 CGAACGAAAAGAATGGAGAGGAG 59.385 47.826 0.00 0.00 0.00 3.69
1998 4747 3.006537 ACGAACGAAAAGAATGGAGAGGA 59.993 43.478 0.14 0.00 0.00 3.71
1999 4748 3.123621 CACGAACGAAAAGAATGGAGAGG 59.876 47.826 0.14 0.00 0.00 3.69
2000 4749 3.123621 CCACGAACGAAAAGAATGGAGAG 59.876 47.826 0.14 0.00 0.00 3.20
2001 4750 3.064207 CCACGAACGAAAAGAATGGAGA 58.936 45.455 0.14 0.00 0.00 3.71
2002 4751 2.412847 GCCACGAACGAAAAGAATGGAG 60.413 50.000 0.14 0.00 0.00 3.86
2003 4752 1.533731 GCCACGAACGAAAAGAATGGA 59.466 47.619 0.14 0.00 0.00 3.41
2004 4753 1.535462 AGCCACGAACGAAAAGAATGG 59.465 47.619 0.14 0.00 0.00 3.16
2005 4754 2.969443 AGCCACGAACGAAAAGAATG 57.031 45.000 0.14 0.00 0.00 2.67
2006 4755 2.225727 GGAAGCCACGAACGAAAAGAAT 59.774 45.455 0.14 0.00 0.00 2.40
2007 4756 1.600485 GGAAGCCACGAACGAAAAGAA 59.400 47.619 0.14 0.00 0.00 2.52
2008 4757 1.223187 GGAAGCCACGAACGAAAAGA 58.777 50.000 0.14 0.00 0.00 2.52
2009 4758 0.237498 GGGAAGCCACGAACGAAAAG 59.763 55.000 0.14 0.00 0.00 2.27
2010 4759 0.179040 AGGGAAGCCACGAACGAAAA 60.179 50.000 0.14 0.00 0.00 2.29
2011 4760 0.601841 GAGGGAAGCCACGAACGAAA 60.602 55.000 0.14 0.00 0.00 3.46
2012 4761 1.005394 GAGGGAAGCCACGAACGAA 60.005 57.895 0.14 0.00 0.00 3.85
2013 4762 1.874345 GAGAGGGAAGCCACGAACGA 61.874 60.000 0.14 0.00 0.00 3.85
2014 4763 1.446272 GAGAGGGAAGCCACGAACG 60.446 63.158 0.00 0.00 0.00 3.95
2015 4764 1.446272 CGAGAGGGAAGCCACGAAC 60.446 63.158 0.00 0.00 0.00 3.95
2016 4765 2.970639 CGAGAGGGAAGCCACGAA 59.029 61.111 0.00 0.00 0.00 3.85
2017 4766 3.760035 GCGAGAGGGAAGCCACGA 61.760 66.667 0.00 0.00 0.00 4.35
2022 4771 2.470938 AAACCAGGCGAGAGGGAAGC 62.471 60.000 0.00 0.00 0.00 3.86
2023 4772 0.674895 CAAACCAGGCGAGAGGGAAG 60.675 60.000 0.00 0.00 0.00 3.46
2024 4773 1.374947 CAAACCAGGCGAGAGGGAA 59.625 57.895 0.00 0.00 0.00 3.97
2025 4774 1.415672 AACAAACCAGGCGAGAGGGA 61.416 55.000 0.00 0.00 0.00 4.20
2026 4775 0.537371 AAACAAACCAGGCGAGAGGG 60.537 55.000 0.00 0.00 0.00 4.30
2027 4776 0.875059 GAAACAAACCAGGCGAGAGG 59.125 55.000 0.00 0.00 0.00 3.69
2028 4777 1.801178 GAGAAACAAACCAGGCGAGAG 59.199 52.381 0.00 0.00 0.00 3.20
2029 4778 1.416401 AGAGAAACAAACCAGGCGAGA 59.584 47.619 0.00 0.00 0.00 4.04
2030 4779 1.801178 GAGAGAAACAAACCAGGCGAG 59.199 52.381 0.00 0.00 0.00 5.03
2031 4780 1.542547 GGAGAGAAACAAACCAGGCGA 60.543 52.381 0.00 0.00 0.00 5.54
2032 4781 0.875059 GGAGAGAAACAAACCAGGCG 59.125 55.000 0.00 0.00 0.00 5.52
2033 4782 1.609072 GTGGAGAGAAACAAACCAGGC 59.391 52.381 0.00 0.00 0.00 4.85
2034 4783 2.618709 GTGTGGAGAGAAACAAACCAGG 59.381 50.000 0.00 0.00 0.00 4.45
2035 4784 3.313526 CAGTGTGGAGAGAAACAAACCAG 59.686 47.826 0.00 0.00 0.00 4.00
2036 4785 3.054728 TCAGTGTGGAGAGAAACAAACCA 60.055 43.478 0.00 0.00 0.00 3.67
2037 4786 3.312697 GTCAGTGTGGAGAGAAACAAACC 59.687 47.826 0.00 0.00 0.00 3.27
2038 4787 3.938963 TGTCAGTGTGGAGAGAAACAAAC 59.061 43.478 0.00 0.00 0.00 2.93
2039 4788 4.191544 CTGTCAGTGTGGAGAGAAACAAA 58.808 43.478 0.00 0.00 30.13 2.83
2040 4789 3.797039 CTGTCAGTGTGGAGAGAAACAA 58.203 45.455 0.00 0.00 30.13 2.83
2041 4790 2.483714 GCTGTCAGTGTGGAGAGAAACA 60.484 50.000 0.93 0.00 30.13 2.83
2042 4791 2.139118 GCTGTCAGTGTGGAGAGAAAC 58.861 52.381 0.93 0.00 30.13 2.78
2043 4792 2.036475 GAGCTGTCAGTGTGGAGAGAAA 59.964 50.000 0.93 0.00 30.13 2.52
2044 4793 1.615883 GAGCTGTCAGTGTGGAGAGAA 59.384 52.381 0.93 0.00 30.13 2.87
2045 4794 1.202989 AGAGCTGTCAGTGTGGAGAGA 60.203 52.381 0.93 0.00 30.13 3.10
2046 4795 1.255882 AGAGCTGTCAGTGTGGAGAG 58.744 55.000 0.93 0.00 0.00 3.20
2047 4796 2.163509 GTAGAGCTGTCAGTGTGGAGA 58.836 52.381 0.93 0.00 0.00 3.71
2048 4797 1.203523 GGTAGAGCTGTCAGTGTGGAG 59.796 57.143 0.93 0.00 0.00 3.86
2049 4798 1.203063 AGGTAGAGCTGTCAGTGTGGA 60.203 52.381 0.93 0.00 0.00 4.02
2050 4799 1.261480 AGGTAGAGCTGTCAGTGTGG 58.739 55.000 0.93 0.00 0.00 4.17
2051 4800 2.669670 CGAAGGTAGAGCTGTCAGTGTG 60.670 54.545 0.93 0.00 0.00 3.82
2052 4801 1.542030 CGAAGGTAGAGCTGTCAGTGT 59.458 52.381 0.93 0.00 0.00 3.55
2053 4802 1.542030 ACGAAGGTAGAGCTGTCAGTG 59.458 52.381 0.93 0.00 0.00 3.66
2054 4803 1.912417 ACGAAGGTAGAGCTGTCAGT 58.088 50.000 0.93 0.00 0.00 3.41
2055 4804 2.600731 CAACGAAGGTAGAGCTGTCAG 58.399 52.381 0.00 0.00 0.00 3.51
2056 4805 1.336887 GCAACGAAGGTAGAGCTGTCA 60.337 52.381 0.00 0.00 0.00 3.58
2057 4806 1.351153 GCAACGAAGGTAGAGCTGTC 58.649 55.000 0.00 0.00 0.00 3.51
2058 4807 0.037232 GGCAACGAAGGTAGAGCTGT 60.037 55.000 0.00 0.00 0.00 4.40
2059 4808 0.741221 GGGCAACGAAGGTAGAGCTG 60.741 60.000 0.00 0.00 37.60 4.24
2060 4809 1.597461 GGGCAACGAAGGTAGAGCT 59.403 57.895 0.00 0.00 37.60 4.09
2061 4810 1.449778 GGGGCAACGAAGGTAGAGC 60.450 63.158 0.00 0.00 37.60 4.09
2062 4811 1.136500 GTAGGGGCAACGAAGGTAGAG 59.864 57.143 0.00 0.00 37.60 2.43
2063 4812 1.188863 GTAGGGGCAACGAAGGTAGA 58.811 55.000 0.00 0.00 37.60 2.59
2064 4813 0.179119 CGTAGGGGCAACGAAGGTAG 60.179 60.000 0.00 0.00 42.90 3.18
2065 4814 0.611618 TCGTAGGGGCAACGAAGGTA 60.612 55.000 6.52 0.00 45.62 3.08
2066 4815 1.909781 TCGTAGGGGCAACGAAGGT 60.910 57.895 6.52 0.00 45.62 3.50
2067 4816 2.975536 TCGTAGGGGCAACGAAGG 59.024 61.111 6.52 0.00 45.62 3.46
2070 4819 1.005867 GTTGTCGTAGGGGCAACGA 60.006 57.895 5.08 5.08 46.35 3.85
2071 4820 2.030958 GGTTGTCGTAGGGGCAACG 61.031 63.158 5.26 0.50 42.22 4.10
2072 4821 0.250597 AAGGTTGTCGTAGGGGCAAC 60.251 55.000 2.75 2.75 41.02 4.17
2073 4822 0.035739 GAAGGTTGTCGTAGGGGCAA 59.964 55.000 0.00 0.00 0.00 4.52
2074 4823 1.675219 GAAGGTTGTCGTAGGGGCA 59.325 57.895 0.00 0.00 0.00 5.36
2075 4824 1.447314 CGAAGGTTGTCGTAGGGGC 60.447 63.158 0.00 0.00 36.26 5.80
2076 4825 4.904466 CGAAGGTTGTCGTAGGGG 57.096 61.111 0.00 0.00 36.26 4.79
2082 4831 0.109226 GGGAGAGACGAAGGTTGTCG 60.109 60.000 0.00 0.00 46.54 4.35
2083 4832 0.109226 CGGGAGAGACGAAGGTTGTC 60.109 60.000 0.00 0.00 36.60 3.18
2084 4833 0.826672 ACGGGAGAGACGAAGGTTGT 60.827 55.000 0.00 0.00 34.93 3.32
2085 4834 0.109226 GACGGGAGAGACGAAGGTTG 60.109 60.000 0.00 0.00 34.93 3.77
2086 4835 0.251253 AGACGGGAGAGACGAAGGTT 60.251 55.000 0.00 0.00 34.93 3.50
2087 4836 0.251253 AAGACGGGAGAGACGAAGGT 60.251 55.000 0.00 0.00 34.93 3.50
2088 4837 0.452585 GAAGACGGGAGAGACGAAGG 59.547 60.000 0.00 0.00 34.93 3.46
2089 4838 1.135632 GTGAAGACGGGAGAGACGAAG 60.136 57.143 0.00 0.00 34.93 3.79
2090 4839 0.879765 GTGAAGACGGGAGAGACGAA 59.120 55.000 0.00 0.00 34.93 3.85
2091 4840 0.959372 GGTGAAGACGGGAGAGACGA 60.959 60.000 0.00 0.00 34.93 4.20
2092 4841 0.961358 AGGTGAAGACGGGAGAGACG 60.961 60.000 0.00 0.00 37.36 4.18
2093 4842 1.258676 AAGGTGAAGACGGGAGAGAC 58.741 55.000 0.00 0.00 0.00 3.36
2094 4843 1.893801 GAAAGGTGAAGACGGGAGAGA 59.106 52.381 0.00 0.00 0.00 3.10
2095 4844 1.066787 GGAAAGGTGAAGACGGGAGAG 60.067 57.143 0.00 0.00 0.00 3.20
2096 4845 0.974383 GGAAAGGTGAAGACGGGAGA 59.026 55.000 0.00 0.00 0.00 3.71
2097 4846 0.685097 TGGAAAGGTGAAGACGGGAG 59.315 55.000 0.00 0.00 0.00 4.30
2098 4847 0.395312 GTGGAAAGGTGAAGACGGGA 59.605 55.000 0.00 0.00 0.00 5.14
2099 4848 0.107831 TGTGGAAAGGTGAAGACGGG 59.892 55.000 0.00 0.00 0.00 5.28
2100 4849 1.806542 CATGTGGAAAGGTGAAGACGG 59.193 52.381 0.00 0.00 0.00 4.79
2101 4850 1.197721 GCATGTGGAAAGGTGAAGACG 59.802 52.381 0.00 0.00 0.00 4.18
2102 4851 2.229792 TGCATGTGGAAAGGTGAAGAC 58.770 47.619 0.00 0.00 0.00 3.01
2103 4852 2.655090 TGCATGTGGAAAGGTGAAGA 57.345 45.000 0.00 0.00 0.00 2.87
2104 4853 4.885907 AGATATGCATGTGGAAAGGTGAAG 59.114 41.667 10.16 0.00 0.00 3.02
2105 4854 4.858850 AGATATGCATGTGGAAAGGTGAA 58.141 39.130 10.16 0.00 0.00 3.18
2106 4855 4.508551 AGATATGCATGTGGAAAGGTGA 57.491 40.909 10.16 0.00 0.00 4.02
2107 4856 4.641541 TCAAGATATGCATGTGGAAAGGTG 59.358 41.667 10.16 0.00 0.00 4.00
2108 4857 4.858850 TCAAGATATGCATGTGGAAAGGT 58.141 39.130 10.16 0.00 0.00 3.50
2109 4858 4.261489 GCTCAAGATATGCATGTGGAAAGG 60.261 45.833 10.16 0.00 0.00 3.11
2110 4859 4.579340 AGCTCAAGATATGCATGTGGAAAG 59.421 41.667 10.16 1.65 0.00 2.62
2111 4860 4.529897 AGCTCAAGATATGCATGTGGAAA 58.470 39.130 10.16 0.00 0.00 3.13
2112 4861 4.132336 GAGCTCAAGATATGCATGTGGAA 58.868 43.478 10.16 0.00 0.00 3.53
2113 4862 3.495629 GGAGCTCAAGATATGCATGTGGA 60.496 47.826 17.19 0.00 0.00 4.02
2114 4863 2.812591 GGAGCTCAAGATATGCATGTGG 59.187 50.000 17.19 0.00 0.00 4.17
2115 4864 2.812591 GGGAGCTCAAGATATGCATGTG 59.187 50.000 17.19 2.35 0.00 3.21
2116 4865 2.709934 AGGGAGCTCAAGATATGCATGT 59.290 45.455 17.19 1.23 0.00 3.21
2117 4866 3.008157 AGAGGGAGCTCAAGATATGCATG 59.992 47.826 17.19 0.00 0.00 4.06
2118 4867 3.249752 AGAGGGAGCTCAAGATATGCAT 58.750 45.455 17.19 3.79 0.00 3.96
2119 4868 2.632028 GAGAGGGAGCTCAAGATATGCA 59.368 50.000 17.19 0.00 35.01 3.96
2120 4869 2.028203 GGAGAGGGAGCTCAAGATATGC 60.028 54.545 17.19 0.00 36.62 3.14
2121 4870 3.258872 CAGGAGAGGGAGCTCAAGATATG 59.741 52.174 17.19 1.91 36.62 1.78
2122 4871 3.116784 ACAGGAGAGGGAGCTCAAGATAT 60.117 47.826 17.19 0.00 36.62 1.63
2123 4872 2.246067 ACAGGAGAGGGAGCTCAAGATA 59.754 50.000 17.19 0.00 36.62 1.98
2124 4873 1.008206 ACAGGAGAGGGAGCTCAAGAT 59.992 52.381 17.19 0.00 36.62 2.40
2125 4874 0.411452 ACAGGAGAGGGAGCTCAAGA 59.589 55.000 17.19 0.00 36.62 3.02
2126 4875 0.823460 GACAGGAGAGGGAGCTCAAG 59.177 60.000 17.19 0.00 36.62 3.02
2127 4876 0.967887 CGACAGGAGAGGGAGCTCAA 60.968 60.000 17.19 0.00 36.62 3.02
2128 4877 1.379176 CGACAGGAGAGGGAGCTCA 60.379 63.158 17.19 0.00 36.62 4.26
2129 4878 0.467290 ATCGACAGGAGAGGGAGCTC 60.467 60.000 4.71 4.71 0.00 4.09
2130 4879 0.847373 TATCGACAGGAGAGGGAGCT 59.153 55.000 0.00 0.00 0.00 4.09
2131 4880 1.693627 TTATCGACAGGAGAGGGAGC 58.306 55.000 0.00 0.00 0.00 4.70
2132 4881 3.702045 AGTTTTATCGACAGGAGAGGGAG 59.298 47.826 0.00 0.00 0.00 4.30
2133 4882 3.709587 AGTTTTATCGACAGGAGAGGGA 58.290 45.455 0.00 0.00 0.00 4.20
2134 4883 4.434520 GAAGTTTTATCGACAGGAGAGGG 58.565 47.826 0.00 0.00 0.00 4.30
2135 4884 4.434520 GGAAGTTTTATCGACAGGAGAGG 58.565 47.826 0.00 0.00 0.00 3.69
2136 4885 4.160626 AGGGAAGTTTTATCGACAGGAGAG 59.839 45.833 0.00 0.00 0.00 3.20
2137 4886 4.094476 AGGGAAGTTTTATCGACAGGAGA 58.906 43.478 0.00 0.00 0.00 3.71
2138 4887 4.434520 GAGGGAAGTTTTATCGACAGGAG 58.565 47.826 0.00 0.00 0.00 3.69
2139 4888 3.197116 GGAGGGAAGTTTTATCGACAGGA 59.803 47.826 0.00 0.00 0.00 3.86
2140 4889 3.055385 TGGAGGGAAGTTTTATCGACAGG 60.055 47.826 0.00 0.00 0.00 4.00
2141 4890 3.933332 GTGGAGGGAAGTTTTATCGACAG 59.067 47.826 0.00 0.00 0.00 3.51
2142 4891 3.307199 GGTGGAGGGAAGTTTTATCGACA 60.307 47.826 0.00 0.00 0.00 4.35
2143 4892 3.268330 GGTGGAGGGAAGTTTTATCGAC 58.732 50.000 0.00 0.00 0.00 4.20
2144 4893 2.093869 CGGTGGAGGGAAGTTTTATCGA 60.094 50.000 0.00 0.00 0.00 3.59
2145 4894 2.277084 CGGTGGAGGGAAGTTTTATCG 58.723 52.381 0.00 0.00 0.00 2.92
2146 4895 2.014857 GCGGTGGAGGGAAGTTTTATC 58.985 52.381 0.00 0.00 0.00 1.75
2147 4896 1.340697 GGCGGTGGAGGGAAGTTTTAT 60.341 52.381 0.00 0.00 0.00 1.40
2148 4897 0.037160 GGCGGTGGAGGGAAGTTTTA 59.963 55.000 0.00 0.00 0.00 1.52
2149 4898 1.228459 GGCGGTGGAGGGAAGTTTT 60.228 57.895 0.00 0.00 0.00 2.43
2150 4899 1.716028 AAGGCGGTGGAGGGAAGTTT 61.716 55.000 0.00 0.00 0.00 2.66
2151 4900 2.125766 GAAGGCGGTGGAGGGAAGTT 62.126 60.000 0.00 0.00 0.00 2.66
2152 4901 2.529389 AAGGCGGTGGAGGGAAGT 60.529 61.111 0.00 0.00 0.00 3.01
2153 4902 2.269241 GAAGGCGGTGGAGGGAAG 59.731 66.667 0.00 0.00 0.00 3.46
2154 4903 3.327404 GGAAGGCGGTGGAGGGAA 61.327 66.667 0.00 0.00 0.00 3.97
2155 4904 4.649705 TGGAAGGCGGTGGAGGGA 62.650 66.667 0.00 0.00 0.00 4.20
2156 4905 3.646715 TTGGAAGGCGGTGGAGGG 61.647 66.667 0.00 0.00 0.00 4.30
2157 4906 2.359975 GTTGGAAGGCGGTGGAGG 60.360 66.667 0.00 0.00 0.00 4.30
2158 4907 2.359975 GGTTGGAAGGCGGTGGAG 60.360 66.667 0.00 0.00 0.00 3.86
2159 4908 3.961414 GGGTTGGAAGGCGGTGGA 61.961 66.667 0.00 0.00 0.00 4.02
2160 4909 4.278513 TGGGTTGGAAGGCGGTGG 62.279 66.667 0.00 0.00 0.00 4.61
2161 4910 2.983592 GTGGGTTGGAAGGCGGTG 60.984 66.667 0.00 0.00 0.00 4.94
2162 4911 4.280019 GGTGGGTTGGAAGGCGGT 62.280 66.667 0.00 0.00 0.00 5.68
2163 4912 3.920093 GAGGTGGGTTGGAAGGCGG 62.920 68.421 0.00 0.00 0.00 6.13
2164 4913 2.359975 GAGGTGGGTTGGAAGGCG 60.360 66.667 0.00 0.00 0.00 5.52
2165 4914 1.002011 GAGAGGTGGGTTGGAAGGC 60.002 63.158 0.00 0.00 0.00 4.35
2166 4915 1.685820 GGAGAGGTGGGTTGGAAGG 59.314 63.158 0.00 0.00 0.00 3.46
2167 4916 1.296715 CGGAGAGGTGGGTTGGAAG 59.703 63.158 0.00 0.00 0.00 3.46
2168 4917 2.221299 CCGGAGAGGTGGGTTGGAA 61.221 63.158 0.00 0.00 34.51 3.53
2169 4918 2.471084 ATCCGGAGAGGTGGGTTGGA 62.471 60.000 11.34 0.00 41.99 3.53
2170 4919 1.995626 ATCCGGAGAGGTGGGTTGG 60.996 63.158 11.34 0.00 41.99 3.77
2171 4920 1.221840 CATCCGGAGAGGTGGGTTG 59.778 63.158 11.34 0.00 41.99 3.77
2172 4921 1.995626 CCATCCGGAGAGGTGGGTT 60.996 63.158 11.34 0.00 41.99 4.11
2173 4922 2.365635 CCATCCGGAGAGGTGGGT 60.366 66.667 11.34 0.00 41.99 4.51
2175 4924 2.365635 ACCCATCCGGAGAGGTGG 60.366 66.667 23.79 19.07 41.99 4.61
2176 4925 2.903357 CACCCATCCGGAGAGGTG 59.097 66.667 30.76 30.76 43.50 4.00
2177 4926 2.365635 CCACCCATCCGGAGAGGT 60.366 66.667 19.97 19.97 41.99 3.85
2178 4927 2.365635 ACCACCCATCCGGAGAGG 60.366 66.667 18.73 18.73 42.97 3.69
2179 4928 1.680522 CTCACCACCCATCCGGAGAG 61.681 65.000 11.34 4.82 34.36 3.20
2180 4929 1.685765 CTCACCACCCATCCGGAGA 60.686 63.158 11.34 0.00 34.64 3.71
2181 4930 2.735772 CCTCACCACCCATCCGGAG 61.736 68.421 11.34 0.00 34.64 4.63
2182 4931 2.687200 CCTCACCACCCATCCGGA 60.687 66.667 6.61 6.61 34.64 5.14
2183 4932 4.489771 GCCTCACCACCCATCCGG 62.490 72.222 0.00 0.00 37.81 5.14
2184 4933 2.876368 GAAGCCTCACCACCCATCCG 62.876 65.000 0.00 0.00 0.00 4.18
2185 4934 1.077429 GAAGCCTCACCACCCATCC 60.077 63.158 0.00 0.00 0.00 3.51
2186 4935 0.107459 GAGAAGCCTCACCACCCATC 60.107 60.000 0.00 0.00 39.24 3.51
2187 4936 0.842030 TGAGAAGCCTCACCACCCAT 60.842 55.000 0.00 0.00 44.01 4.00
2188 4937 1.461268 TGAGAAGCCTCACCACCCA 60.461 57.895 0.00 0.00 44.01 4.51
2189 4938 1.298014 CTGAGAAGCCTCACCACCC 59.702 63.158 0.00 0.00 44.01 4.61
2190 4939 0.036858 GACTGAGAAGCCTCACCACC 60.037 60.000 0.00 0.00 44.01 4.61
2191 4940 0.681733 TGACTGAGAAGCCTCACCAC 59.318 55.000 0.00 0.00 44.01 4.16
2192 4941 1.277273 CATGACTGAGAAGCCTCACCA 59.723 52.381 0.00 0.00 44.01 4.17
2193 4942 1.552337 TCATGACTGAGAAGCCTCACC 59.448 52.381 0.00 0.00 44.01 4.02
2194 4943 3.196463 CATCATGACTGAGAAGCCTCAC 58.804 50.000 0.00 0.00 44.01 3.51
2195 4944 2.419713 GCATCATGACTGAGAAGCCTCA 60.420 50.000 0.00 0.00 46.48 3.86
2196 4945 2.158928 AGCATCATGACTGAGAAGCCTC 60.159 50.000 0.00 0.00 39.86 4.70
2197 4946 1.838715 AGCATCATGACTGAGAAGCCT 59.161 47.619 0.00 0.00 34.12 4.58
2198 4947 2.328819 AGCATCATGACTGAGAAGCC 57.671 50.000 0.00 0.00 34.12 4.35
2199 4948 4.050553 GTCTAGCATCATGACTGAGAAGC 58.949 47.826 0.00 0.00 34.12 3.86
2200 4949 5.067544 TGAGTCTAGCATCATGACTGAGAAG 59.932 44.000 0.00 0.00 40.63 2.85
2201 4950 4.952335 TGAGTCTAGCATCATGACTGAGAA 59.048 41.667 0.00 0.00 40.63 2.87
2202 4951 4.337836 GTGAGTCTAGCATCATGACTGAGA 59.662 45.833 0.00 0.00 40.63 3.27
2203 4952 4.338964 AGTGAGTCTAGCATCATGACTGAG 59.661 45.833 0.00 0.00 40.63 3.35
2204 4953 4.276642 AGTGAGTCTAGCATCATGACTGA 58.723 43.478 0.00 0.00 40.63 3.41
2205 4954 4.652421 AGTGAGTCTAGCATCATGACTG 57.348 45.455 0.00 0.00 40.63 3.51
2206 4955 5.417811 CAAAGTGAGTCTAGCATCATGACT 58.582 41.667 0.00 0.00 42.87 3.41
2207 4956 4.033817 GCAAAGTGAGTCTAGCATCATGAC 59.966 45.833 0.00 0.00 0.00 3.06
2208 4957 4.081254 AGCAAAGTGAGTCTAGCATCATGA 60.081 41.667 0.00 0.00 32.23 3.07
2209 4958 4.190001 AGCAAAGTGAGTCTAGCATCATG 58.810 43.478 0.78 0.00 32.23 3.07
2210 4959 4.161942 AGAGCAAAGTGAGTCTAGCATCAT 59.838 41.667 0.78 0.00 32.23 2.45
2211 4960 3.513119 AGAGCAAAGTGAGTCTAGCATCA 59.487 43.478 0.00 0.00 32.23 3.07
2212 4961 4.111916 GAGAGCAAAGTGAGTCTAGCATC 58.888 47.826 0.00 0.00 32.23 3.91
2213 4962 3.513119 TGAGAGCAAAGTGAGTCTAGCAT 59.487 43.478 0.00 0.00 32.23 3.79
2214 4963 2.893489 TGAGAGCAAAGTGAGTCTAGCA 59.107 45.455 0.00 0.00 32.23 3.49
2215 4964 3.584406 TGAGAGCAAAGTGAGTCTAGC 57.416 47.619 0.00 0.00 0.00 3.42
2216 4965 4.681744 GGATGAGAGCAAAGTGAGTCTAG 58.318 47.826 0.00 0.00 0.00 2.43
2217 4966 3.129462 CGGATGAGAGCAAAGTGAGTCTA 59.871 47.826 0.00 0.00 0.00 2.59
2218 4967 2.094286 CGGATGAGAGCAAAGTGAGTCT 60.094 50.000 0.00 0.00 0.00 3.24
2219 4968 2.266554 CGGATGAGAGCAAAGTGAGTC 58.733 52.381 0.00 0.00 0.00 3.36
2220 4969 1.066573 CCGGATGAGAGCAAAGTGAGT 60.067 52.381 0.00 0.00 0.00 3.41
2221 4970 1.649664 CCGGATGAGAGCAAAGTGAG 58.350 55.000 0.00 0.00 0.00 3.51
2222 4971 0.391661 GCCGGATGAGAGCAAAGTGA 60.392 55.000 5.05 0.00 0.00 3.41
2223 4972 1.372087 GGCCGGATGAGAGCAAAGTG 61.372 60.000 5.05 0.00 0.00 3.16
2224 4973 1.078143 GGCCGGATGAGAGCAAAGT 60.078 57.895 5.05 0.00 0.00 2.66
2225 4974 0.393537 AAGGCCGGATGAGAGCAAAG 60.394 55.000 5.05 0.00 0.00 2.77
2226 4975 0.392998 GAAGGCCGGATGAGAGCAAA 60.393 55.000 5.05 0.00 0.00 3.68
2227 4976 1.221840 GAAGGCCGGATGAGAGCAA 59.778 57.895 5.05 0.00 0.00 3.91
2228 4977 1.989508 TGAAGGCCGGATGAGAGCA 60.990 57.895 5.05 0.00 0.00 4.26
2229 4978 1.522580 GTGAAGGCCGGATGAGAGC 60.523 63.158 5.05 0.00 0.00 4.09
2230 4979 0.103937 GAGTGAAGGCCGGATGAGAG 59.896 60.000 5.05 0.00 0.00 3.20
2231 4980 0.614697 TGAGTGAAGGCCGGATGAGA 60.615 55.000 5.05 0.00 0.00 3.27
2232 4981 0.460987 GTGAGTGAAGGCCGGATGAG 60.461 60.000 5.05 0.00 0.00 2.90
2233 4982 0.904865 AGTGAGTGAAGGCCGGATGA 60.905 55.000 5.05 0.00 0.00 2.92
2234 4983 0.460987 GAGTGAGTGAAGGCCGGATG 60.461 60.000 5.05 0.00 0.00 3.51
2235 4984 0.904865 TGAGTGAGTGAAGGCCGGAT 60.905 55.000 5.05 0.00 0.00 4.18
2236 4985 1.533033 TGAGTGAGTGAAGGCCGGA 60.533 57.895 5.05 0.00 0.00 5.14
2237 4986 1.374758 GTGAGTGAGTGAAGGCCGG 60.375 63.158 0.00 0.00 0.00 6.13
2238 4987 0.034059 AAGTGAGTGAGTGAAGGCCG 59.966 55.000 0.00 0.00 0.00 6.13
2239 4988 1.070758 TGAAGTGAGTGAGTGAAGGCC 59.929 52.381 0.00 0.00 0.00 5.19
2240 4989 2.533266 TGAAGTGAGTGAGTGAAGGC 57.467 50.000 0.00 0.00 0.00 4.35
2241 4990 3.993081 GACATGAAGTGAGTGAGTGAAGG 59.007 47.826 0.00 0.00 0.00 3.46
2242 4991 4.685165 CAGACATGAAGTGAGTGAGTGAAG 59.315 45.833 0.00 0.00 0.00 3.02
2243 4992 4.100035 ACAGACATGAAGTGAGTGAGTGAA 59.900 41.667 0.00 0.00 0.00 3.18
2244 4993 3.638627 ACAGACATGAAGTGAGTGAGTGA 59.361 43.478 0.00 0.00 0.00 3.41
2245 4994 3.986572 GACAGACATGAAGTGAGTGAGTG 59.013 47.826 0.00 0.00 0.00 3.51
2246 4995 3.894427 AGACAGACATGAAGTGAGTGAGT 59.106 43.478 0.00 0.00 0.00 3.41
2247 4996 4.517952 AGACAGACATGAAGTGAGTGAG 57.482 45.455 0.00 0.00 0.00 3.51
2248 4997 4.944619 AAGACAGACATGAAGTGAGTGA 57.055 40.909 0.00 0.00 0.00 3.41
2249 4998 4.149571 CGAAAGACAGACATGAAGTGAGTG 59.850 45.833 0.00 0.00 0.00 3.51
2250 4999 4.302455 CGAAAGACAGACATGAAGTGAGT 58.698 43.478 0.00 0.00 0.00 3.41
2251 5000 3.122613 GCGAAAGACAGACATGAAGTGAG 59.877 47.826 0.00 0.00 0.00 3.51
2252 5001 3.059884 GCGAAAGACAGACATGAAGTGA 58.940 45.455 0.00 0.00 0.00 3.41
2253 5002 2.158449 GGCGAAAGACAGACATGAAGTG 59.842 50.000 0.00 0.00 40.66 3.16
2254 5003 2.037772 AGGCGAAAGACAGACATGAAGT 59.962 45.455 0.00 0.00 46.78 3.01
2255 5004 2.670414 GAGGCGAAAGACAGACATGAAG 59.330 50.000 0.00 0.00 46.78 3.02
2256 5005 2.612972 GGAGGCGAAAGACAGACATGAA 60.613 50.000 0.00 0.00 46.78 2.57
2257 5006 1.066858 GGAGGCGAAAGACAGACATGA 60.067 52.381 0.00 0.00 46.78 3.07
2258 5007 1.363744 GGAGGCGAAAGACAGACATG 58.636 55.000 0.00 0.00 46.78 3.21
2259 5008 0.250513 GGGAGGCGAAAGACAGACAT 59.749 55.000 0.00 0.00 46.78 3.06
2260 5009 1.671742 GGGAGGCGAAAGACAGACA 59.328 57.895 0.00 0.00 46.78 3.41
2261 5010 1.079057 GGGGAGGCGAAAGACAGAC 60.079 63.158 0.00 0.00 46.78 3.51
2262 5011 1.125093 TTGGGGAGGCGAAAGACAGA 61.125 55.000 0.00 0.00 46.78 3.41
2263 5012 0.250727 TTTGGGGAGGCGAAAGACAG 60.251 55.000 0.00 0.00 46.78 3.51
2264 5013 0.183971 TTTTGGGGAGGCGAAAGACA 59.816 50.000 0.00 0.00 46.78 3.41
2265 5014 1.324383 TTTTTGGGGAGGCGAAAGAC 58.676 50.000 0.00 0.00 42.06 3.01
2266 5015 3.831651 TTTTTGGGGAGGCGAAAGA 57.168 47.368 0.00 0.00 0.00 2.52
2281 5030 5.392380 CGCATCTAGCTGTTTCAGGATTTTT 60.392 40.000 0.00 0.00 42.61 1.94
2282 5031 4.095483 CGCATCTAGCTGTTTCAGGATTTT 59.905 41.667 0.00 0.00 42.61 1.82
2283 5032 3.624861 CGCATCTAGCTGTTTCAGGATTT 59.375 43.478 0.00 0.00 42.61 2.17
2284 5033 3.118629 TCGCATCTAGCTGTTTCAGGATT 60.119 43.478 0.00 0.00 42.61 3.01
2285 5034 2.432146 TCGCATCTAGCTGTTTCAGGAT 59.568 45.455 0.00 0.00 42.61 3.24
2286 5035 1.824852 TCGCATCTAGCTGTTTCAGGA 59.175 47.619 0.00 0.00 42.61 3.86
2287 5036 1.929836 GTCGCATCTAGCTGTTTCAGG 59.070 52.381 0.00 0.00 42.61 3.86
2288 5037 1.929836 GGTCGCATCTAGCTGTTTCAG 59.070 52.381 0.00 0.00 42.61 3.02
2289 5038 1.405526 GGGTCGCATCTAGCTGTTTCA 60.406 52.381 0.00 0.00 42.61 2.69
2290 5039 1.291132 GGGTCGCATCTAGCTGTTTC 58.709 55.000 0.00 0.00 42.61 2.78
2291 5040 0.460284 CGGGTCGCATCTAGCTGTTT 60.460 55.000 0.00 0.00 42.61 2.83
2292 5041 1.141881 CGGGTCGCATCTAGCTGTT 59.858 57.895 0.00 0.00 42.61 3.16
2293 5042 2.808315 CGGGTCGCATCTAGCTGT 59.192 61.111 0.00 0.00 42.61 4.40
2304 5053 0.456995 GAAGAAGACTCTGCGGGTCG 60.457 60.000 8.07 0.00 38.58 4.79
2305 5054 0.892063 AGAAGAAGACTCTGCGGGTC 59.108 55.000 6.15 6.15 31.55 4.46
2306 5055 2.096248 CTAGAAGAAGACTCTGCGGGT 58.904 52.381 0.00 0.00 31.55 5.28
2307 5056 1.407258 CCTAGAAGAAGACTCTGCGGG 59.593 57.143 0.00 0.00 31.55 6.13
2308 5057 2.096248 ACCTAGAAGAAGACTCTGCGG 58.904 52.381 0.00 0.00 31.55 5.69
2309 5058 3.191581 TCAACCTAGAAGAAGACTCTGCG 59.808 47.826 0.00 0.00 31.55 5.18
2310 5059 4.490743 GTCAACCTAGAAGAAGACTCTGC 58.509 47.826 0.00 0.00 30.03 4.26
2311 5060 4.524714 TGGTCAACCTAGAAGAAGACTCTG 59.475 45.833 0.10 0.00 36.82 3.35
2312 5061 4.742012 TGGTCAACCTAGAAGAAGACTCT 58.258 43.478 0.10 0.00 36.82 3.24
2313 5062 5.244178 TCTTGGTCAACCTAGAAGAAGACTC 59.756 44.000 10.35 0.00 43.16 3.36
2314 5063 5.148502 TCTTGGTCAACCTAGAAGAAGACT 58.851 41.667 10.35 0.00 43.16 3.24
2315 5064 5.470047 TCTTGGTCAACCTAGAAGAAGAC 57.530 43.478 10.35 0.00 43.16 3.01
2322 5071 4.072131 GCATGTTTCTTGGTCAACCTAGA 58.928 43.478 8.94 8.94 44.14 2.43
2323 5072 3.820467 TGCATGTTTCTTGGTCAACCTAG 59.180 43.478 4.48 4.48 39.70 3.02
2324 5073 3.568007 GTGCATGTTTCTTGGTCAACCTA 59.432 43.478 0.10 0.00 36.82 3.08
2325 5074 2.362077 GTGCATGTTTCTTGGTCAACCT 59.638 45.455 0.10 0.00 36.82 3.50
2326 5075 2.100584 TGTGCATGTTTCTTGGTCAACC 59.899 45.455 0.00 0.00 0.00 3.77
2327 5076 3.435105 TGTGCATGTTTCTTGGTCAAC 57.565 42.857 0.00 0.00 0.00 3.18
2328 5077 3.181477 CCTTGTGCATGTTTCTTGGTCAA 60.181 43.478 0.00 0.00 0.00 3.18
2329 5078 2.361757 CCTTGTGCATGTTTCTTGGTCA 59.638 45.455 0.00 0.00 0.00 4.02
2330 5079 2.288395 CCCTTGTGCATGTTTCTTGGTC 60.288 50.000 0.00 0.00 0.00 4.02
2331 5080 1.688197 CCCTTGTGCATGTTTCTTGGT 59.312 47.619 0.00 0.00 0.00 3.67
2332 5081 1.606224 GCCCTTGTGCATGTTTCTTGG 60.606 52.381 0.00 0.00 0.00 3.61
2333 5082 1.342174 AGCCCTTGTGCATGTTTCTTG 59.658 47.619 0.00 0.00 0.00 3.02
2334 5083 1.708341 AGCCCTTGTGCATGTTTCTT 58.292 45.000 0.00 0.00 0.00 2.52
2335 5084 2.584835 TAGCCCTTGTGCATGTTTCT 57.415 45.000 0.00 0.00 0.00 2.52
2336 5085 2.558359 ACTTAGCCCTTGTGCATGTTTC 59.442 45.455 0.00 0.00 0.00 2.78
2337 5086 2.297033 CACTTAGCCCTTGTGCATGTTT 59.703 45.455 0.00 0.00 0.00 2.83
2338 5087 1.888512 CACTTAGCCCTTGTGCATGTT 59.111 47.619 0.00 0.00 0.00 2.71
2339 5088 1.202927 ACACTTAGCCCTTGTGCATGT 60.203 47.619 0.00 0.00 35.33 3.21
2340 5089 1.538047 ACACTTAGCCCTTGTGCATG 58.462 50.000 0.00 0.00 35.33 4.06
2341 5090 3.652057 ATACACTTAGCCCTTGTGCAT 57.348 42.857 0.00 0.00 35.33 3.96
2342 5091 3.433306 AATACACTTAGCCCTTGTGCA 57.567 42.857 0.00 0.00 35.33 4.57
2343 5092 6.318900 AGAAATAATACACTTAGCCCTTGTGC 59.681 38.462 0.00 0.00 35.33 4.57
2344 5093 7.865706 AGAAATAATACACTTAGCCCTTGTG 57.134 36.000 0.00 0.00 37.67 3.33
2345 5094 7.280205 CGAAGAAATAATACACTTAGCCCTTGT 59.720 37.037 0.00 0.00 0.00 3.16
2346 5095 7.494625 TCGAAGAAATAATACACTTAGCCCTTG 59.505 37.037 0.00 0.00 0.00 3.61
2347 5096 7.562135 TCGAAGAAATAATACACTTAGCCCTT 58.438 34.615 0.00 0.00 0.00 3.95
2348 5097 7.120923 TCGAAGAAATAATACACTTAGCCCT 57.879 36.000 0.00 0.00 0.00 5.19
2349 5098 7.781548 TTCGAAGAAATAATACACTTAGCCC 57.218 36.000 0.00 0.00 45.90 5.19
2356 5105 9.937577 GCAAACATTTTCGAAGAAATAATACAC 57.062 29.630 0.00 0.00 45.90 2.90
2357 5106 9.684448 TGCAAACATTTTCGAAGAAATAATACA 57.316 25.926 0.00 0.00 45.90 2.29
2360 5109 9.862585 GTTTGCAAACATTTTCGAAGAAATAAT 57.137 25.926 32.21 0.00 39.39 1.28
2361 5110 8.873830 TGTTTGCAAACATTTTCGAAGAAATAA 58.126 25.926 35.10 11.25 42.59 1.40
2362 5111 8.412608 TGTTTGCAAACATTTTCGAAGAAATA 57.587 26.923 35.10 11.61 42.59 1.40
2363 5112 7.301068 TGTTTGCAAACATTTTCGAAGAAAT 57.699 28.000 35.10 0.00 42.59 2.17
2364 5113 6.712241 TGTTTGCAAACATTTTCGAAGAAA 57.288 29.167 35.10 12.63 42.59 2.52
2388 5137 8.943594 TTAACACCTAGACCACCATTATTTTT 57.056 30.769 0.00 0.00 0.00 1.94
2389 5138 8.943594 TTTAACACCTAGACCACCATTATTTT 57.056 30.769 0.00 0.00 0.00 1.82
2390 5139 8.799367 GTTTTAACACCTAGACCACCATTATTT 58.201 33.333 0.00 0.00 0.00 1.40
2391 5140 7.395206 GGTTTTAACACCTAGACCACCATTATT 59.605 37.037 3.41 0.00 33.50 1.40
2392 5141 6.888088 GGTTTTAACACCTAGACCACCATTAT 59.112 38.462 3.41 0.00 33.50 1.28
2393 5142 6.044637 AGGTTTTAACACCTAGACCACCATTA 59.955 38.462 11.70 0.00 46.14 1.90
2394 5143 5.074804 GGTTTTAACACCTAGACCACCATT 58.925 41.667 3.41 0.00 33.50 3.16
2395 5144 4.352893 AGGTTTTAACACCTAGACCACCAT 59.647 41.667 11.70 0.00 46.14 3.55
2396 5145 3.717913 AGGTTTTAACACCTAGACCACCA 59.282 43.478 11.70 0.00 46.14 4.17
2397 5146 4.070009 CAGGTTTTAACACCTAGACCACC 58.930 47.826 12.94 0.00 46.27 4.61
2398 5147 3.501062 GCAGGTTTTAACACCTAGACCAC 59.499 47.826 12.94 0.00 46.27 4.16
2399 5148 3.393278 AGCAGGTTTTAACACCTAGACCA 59.607 43.478 12.94 0.00 46.27 4.02
2400 5149 4.001652 GAGCAGGTTTTAACACCTAGACC 58.998 47.826 12.94 3.09 46.27 3.85
2401 5150 4.451435 GTGAGCAGGTTTTAACACCTAGAC 59.549 45.833 12.94 6.31 46.27 2.59
2402 5151 4.347000 AGTGAGCAGGTTTTAACACCTAGA 59.653 41.667 12.94 0.00 46.27 2.43
2403 5152 4.642429 AGTGAGCAGGTTTTAACACCTAG 58.358 43.478 12.94 8.92 46.27 3.02
2404 5153 4.699925 AGTGAGCAGGTTTTAACACCTA 57.300 40.909 12.94 0.00 46.27 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.