Multiple sequence alignment - TraesCS1D01G286700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G286700 chr1D 100.000 2522 0 0 1 2522 384848100 384845579 0.000000e+00 4658.0
1 TraesCS1D01G286700 chr1D 87.543 578 46 16 821 1392 445367016 445366459 0.000000e+00 645.0
2 TraesCS1D01G286700 chr1D 84.855 449 53 9 1 438 103741211 103741655 2.980000e-119 438.0
3 TraesCS1D01G286700 chr1D 83.250 400 54 10 1 395 459832780 459833171 3.090000e-94 355.0
4 TraesCS1D01G286700 chr1D 82.334 317 44 9 67 381 28485238 28485544 5.350000e-67 265.0
5 TraesCS1D01G286700 chr1D 85.774 239 20 8 2 238 472903851 472903625 9.010000e-60 241.0
6 TraesCS1D01G286700 chr1D 80.000 260 38 10 102 358 2462710 2462958 1.990000e-41 180.0
7 TraesCS1D01G286700 chr1D 76.224 286 28 16 90 374 7904580 7904826 5.700000e-22 115.0
8 TraesCS1D01G286700 chr1D 78.289 152 23 8 2 153 898377 898236 3.460000e-14 89.8
9 TraesCS1D01G286700 chr1B 89.810 1845 106 37 702 2509 516971987 516970188 0.000000e+00 2290.0
10 TraesCS1D01G286700 chr1B 89.326 534 44 10 819 1341 521860792 521861323 0.000000e+00 658.0
11 TraesCS1D01G286700 chr1B 87.136 583 57 15 780 1352 521352192 521352766 0.000000e+00 645.0
12 TraesCS1D01G286700 chr1B 89.143 525 46 10 821 1340 608335832 608335314 0.000000e+00 643.0
13 TraesCS1D01G286700 chr1B 82.143 448 59 14 1 442 670973443 670973875 5.130000e-97 364.0
14 TraesCS1D01G286700 chr1B 81.886 403 60 12 24 422 277964966 277964573 6.730000e-86 327.0
15 TraesCS1D01G286700 chr1A 91.600 1000 71 10 559 1553 485013374 485012383 0.000000e+00 1369.0
16 TraesCS1D01G286700 chr1A 88.561 542 48 11 815 1345 487604341 487604879 0.000000e+00 645.0
17 TraesCS1D01G286700 chr1A 87.034 563 60 10 787 1341 487568486 487569043 7.660000e-175 623.0
18 TraesCS1D01G286700 chr1A 79.458 443 80 8 1 437 448931662 448931225 1.130000e-78 303.0
19 TraesCS1D01G286700 chr1A 81.030 369 56 14 59 422 533264054 533263695 5.310000e-72 281.0
20 TraesCS1D01G286700 chr6B 88.163 566 50 15 787 1341 679983661 679983102 0.000000e+00 658.0
21 TraesCS1D01G286700 chr6B 83.287 359 49 10 67 422 107879466 107879816 1.130000e-83 320.0
22 TraesCS1D01G286700 chr6B 81.390 403 62 12 24 422 393639796 393640189 1.460000e-82 316.0
23 TraesCS1D01G286700 chr3A 86.552 580 57 17 821 1392 111104331 111103765 9.910000e-174 619.0
24 TraesCS1D01G286700 chr3B 85.169 445 52 11 1 439 578758301 578758737 6.400000e-121 444.0
25 TraesCS1D01G286700 chr3B 82.701 422 57 13 24 437 53570743 53570330 6.630000e-96 361.0
26 TraesCS1D01G286700 chr3B 82.673 404 56 14 24 422 124780264 124779870 1.860000e-91 346.0
27 TraesCS1D01G286700 chr3B 82.382 403 59 11 24 422 222147412 222147018 8.640000e-90 340.0
28 TraesCS1D01G286700 chr3B 93.269 104 7 0 2294 2397 714106395 714106498 1.210000e-33 154.0
29 TraesCS1D01G286700 chr7D 83.929 448 56 7 1 438 457215727 457216168 5.020000e-112 414.0
30 TraesCS1D01G286700 chr6D 83.375 403 55 12 24 422 56208449 56208055 1.840000e-96 363.0
31 TraesCS1D01G286700 chr6D 77.898 371 59 15 1 359 344369939 344369580 2.540000e-50 209.0
32 TraesCS1D01G286700 chr6D 93.333 105 7 0 2292 2396 425085950 425086054 3.360000e-34 156.0
33 TraesCS1D01G286700 chr6D 93.846 65 4 0 1 65 414451604 414451540 5.740000e-17 99.0
34 TraesCS1D01G286700 chr5B 82.734 417 62 9 24 437 684768084 684768493 1.840000e-96 363.0
35 TraesCS1D01G286700 chr5B 82.134 403 60 11 24 422 72093196 72093590 4.020000e-88 335.0
36 TraesCS1D01G286700 chr5B 81.638 403 62 11 24 422 604719221 604719615 8.700000e-85 324.0
37 TraesCS1D01G286700 chr5B 81.436 404 64 10 24 424 457448610 457449005 1.130000e-83 320.0
38 TraesCS1D01G286700 chr4B 81.840 413 50 20 43 443 78033895 78034294 8.700000e-85 324.0
39 TraesCS1D01G286700 chr4B 82.749 371 55 8 67 435 671837280 671836917 3.130000e-84 322.0
40 TraesCS1D01G286700 chr4B 80.941 404 63 13 24 422 633294406 633294012 8.760000e-80 307.0
41 TraesCS1D01G286700 chr4B 80.191 419 60 19 24 437 237947834 237948234 2.450000e-75 292.0
42 TraesCS1D01G286700 chr4B 87.037 216 18 9 81 295 522698398 522698192 4.190000e-58 235.0
43 TraesCS1D01G286700 chr4A 81.638 403 62 12 24 422 674355858 674355464 8.700000e-85 324.0
44 TraesCS1D01G286700 chr7B 83.668 349 41 8 1 346 732636734 732637069 5.240000e-82 315.0
45 TraesCS1D01G286700 chr7B 91.892 111 8 1 2303 2412 642496140 642496250 1.210000e-33 154.0
46 TraesCS1D01G286700 chr4D 82.111 341 53 6 78 418 222934715 222935047 4.110000e-73 285.0
47 TraesCS1D01G286700 chr4D 80.159 378 55 10 67 437 48722910 48722546 5.350000e-67 265.0
48 TraesCS1D01G286700 chr4D 80.726 358 54 11 1 358 327427471 327427813 5.350000e-67 265.0
49 TraesCS1D01G286700 chr4D 81.092 238 30 11 85 321 509439134 509439357 2.580000e-40 176.0
50 TraesCS1D01G286700 chr2D 95.050 101 5 0 2303 2403 593274339 593274239 2.600000e-35 159.0
51 TraesCS1D01G286700 chr2B 95.050 101 5 0 2300 2400 440223866 440223766 2.600000e-35 159.0
52 TraesCS1D01G286700 chr7A 93.333 105 7 0 2300 2404 629780018 629780122 3.360000e-34 156.0
53 TraesCS1D01G286700 chr5A 92.661 109 7 1 2292 2399 339737764 339737872 3.360000e-34 156.0
54 TraesCS1D01G286700 chr2A 92.661 109 6 1 2295 2401 186408266 186408158 3.360000e-34 156.0
55 TraesCS1D01G286700 chr2A 90.435 115 10 1 2286 2400 672771899 672771786 1.560000e-32 150.0
56 TraesCS1D01G286700 chr5D 87.736 106 13 0 1 106 551463932 551463827 9.470000e-25 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G286700 chr1D 384845579 384848100 2521 True 4658 4658 100.000 1 2522 1 chr1D.!!$R2 2521
1 TraesCS1D01G286700 chr1D 445366459 445367016 557 True 645 645 87.543 821 1392 1 chr1D.!!$R3 571
2 TraesCS1D01G286700 chr1B 516970188 516971987 1799 True 2290 2290 89.810 702 2509 1 chr1B.!!$R2 1807
3 TraesCS1D01G286700 chr1B 521860792 521861323 531 False 658 658 89.326 819 1341 1 chr1B.!!$F2 522
4 TraesCS1D01G286700 chr1B 521352192 521352766 574 False 645 645 87.136 780 1352 1 chr1B.!!$F1 572
5 TraesCS1D01G286700 chr1B 608335314 608335832 518 True 643 643 89.143 821 1340 1 chr1B.!!$R3 519
6 TraesCS1D01G286700 chr1A 485012383 485013374 991 True 1369 1369 91.600 559 1553 1 chr1A.!!$R2 994
7 TraesCS1D01G286700 chr1A 487604341 487604879 538 False 645 645 88.561 815 1345 1 chr1A.!!$F2 530
8 TraesCS1D01G286700 chr1A 487568486 487569043 557 False 623 623 87.034 787 1341 1 chr1A.!!$F1 554
9 TraesCS1D01G286700 chr6B 679983102 679983661 559 True 658 658 88.163 787 1341 1 chr6B.!!$R1 554
10 TraesCS1D01G286700 chr3A 111103765 111104331 566 True 619 619 86.552 821 1392 1 chr3A.!!$R1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 416 0.322816 CATGATTAGGATGGGCCGGG 60.323 60.0 2.18 0.0 43.43 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2397 2468 0.320334 TCTGCACCGGTGTACACATG 60.32 55.0 33.92 20.56 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.758931 GGCCAAATGGGACGTGCC 61.759 66.667 20.69 20.69 40.01 5.01
18 19 2.988684 GCCAAATGGGACGTGCCA 60.989 61.111 31.81 31.81 40.01 4.92
19 20 2.569354 GCCAAATGGGACGTGCCAA 61.569 57.895 33.22 16.42 40.01 4.52
20 21 1.288752 CCAAATGGGACGTGCCAAC 59.711 57.895 33.22 3.56 40.01 3.77
21 22 1.288752 CAAATGGGACGTGCCAACC 59.711 57.895 33.22 7.37 38.95 3.77
22 23 1.152652 AAATGGGACGTGCCAACCA 60.153 52.632 33.22 9.93 38.95 3.67
23 24 1.178534 AAATGGGACGTGCCAACCAG 61.179 55.000 33.22 0.00 38.95 4.00
24 25 3.567579 ATGGGACGTGCCAACCAGG 62.568 63.158 33.22 0.00 38.95 4.45
80 81 3.575400 CATGCATGGCACGCGCTA 61.575 61.111 19.40 0.00 43.04 4.26
81 82 2.823593 ATGCATGGCACGCGCTAA 60.824 55.556 5.73 0.00 43.04 3.09
82 83 2.405805 ATGCATGGCACGCGCTAAA 61.406 52.632 5.73 0.00 43.04 1.85
83 84 2.576847 GCATGGCACGCGCTAAAC 60.577 61.111 5.73 0.00 38.60 2.01
85 86 3.496131 ATGGCACGCGCTAAACGG 61.496 61.111 5.73 0.00 43.93 4.44
114 115 2.981909 CATGCGGCATGCCCTAGG 60.982 66.667 30.79 17.64 45.60 3.02
125 126 4.489771 CCCTAGGCCGTGCTTGGG 62.490 72.222 2.05 0.00 36.13 4.12
132 133 2.821366 CCGTGCTTGGGCTGCTAG 60.821 66.667 0.00 0.00 39.59 3.42
133 134 2.821366 CGTGCTTGGGCTGCTAGG 60.821 66.667 0.00 0.00 39.59 3.02
134 135 3.136791 GTGCTTGGGCTGCTAGGC 61.137 66.667 0.00 2.14 40.51 3.93
135 136 3.333219 TGCTTGGGCTGCTAGGCT 61.333 61.111 0.00 0.00 41.09 4.58
136 137 2.827642 GCTTGGGCTGCTAGGCTG 60.828 66.667 0.00 0.00 41.09 4.85
137 138 2.993008 CTTGGGCTGCTAGGCTGA 59.007 61.111 0.00 0.00 41.09 4.26
138 139 1.153208 CTTGGGCTGCTAGGCTGAG 60.153 63.158 0.00 0.00 41.09 3.35
139 140 3.335356 TTGGGCTGCTAGGCTGAGC 62.335 63.158 0.00 0.00 41.09 4.26
146 147 4.880537 CTAGGCTGAGCACGCGGG 62.881 72.222 12.47 7.92 0.00 6.13
178 179 7.448748 GGCACAACCCGATTATCTTATTATT 57.551 36.000 0.00 0.00 0.00 1.40
179 180 7.882179 GGCACAACCCGATTATCTTATTATTT 58.118 34.615 0.00 0.00 0.00 1.40
180 181 8.357402 GGCACAACCCGATTATCTTATTATTTT 58.643 33.333 0.00 0.00 0.00 1.82
181 182 9.744468 GCACAACCCGATTATCTTATTATTTTT 57.256 29.630 0.00 0.00 0.00 1.94
209 210 8.376270 ACTTTTTATGTACTCTCTATATGGCCC 58.624 37.037 0.00 0.00 0.00 5.80
210 211 7.865530 TTTTATGTACTCTCTATATGGCCCA 57.134 36.000 0.00 0.00 0.00 5.36
211 212 7.865530 TTTATGTACTCTCTATATGGCCCAA 57.134 36.000 0.00 0.00 0.00 4.12
212 213 5.746990 ATGTACTCTCTATATGGCCCAAC 57.253 43.478 0.00 0.00 0.00 3.77
213 214 4.552674 TGTACTCTCTATATGGCCCAACA 58.447 43.478 0.00 0.00 0.00 3.33
214 215 4.588951 TGTACTCTCTATATGGCCCAACAG 59.411 45.833 0.00 0.00 0.00 3.16
215 216 2.975489 ACTCTCTATATGGCCCAACAGG 59.025 50.000 0.00 0.00 39.47 4.00
216 217 2.975489 CTCTCTATATGGCCCAACAGGT 59.025 50.000 0.00 0.00 38.26 4.00
217 218 4.160329 CTCTCTATATGGCCCAACAGGTA 58.840 47.826 0.00 0.00 38.26 3.08
218 219 4.562767 TCTCTATATGGCCCAACAGGTAA 58.437 43.478 0.00 0.00 38.26 2.85
219 220 4.972568 TCTCTATATGGCCCAACAGGTAAA 59.027 41.667 0.00 0.00 38.26 2.01
220 221 5.430417 TCTCTATATGGCCCAACAGGTAAAA 59.570 40.000 0.00 0.00 38.26 1.52
221 222 6.069323 TCTCTATATGGCCCAACAGGTAAAAA 60.069 38.462 0.00 0.00 38.26 1.94
222 223 6.678547 TCTATATGGCCCAACAGGTAAAAAT 58.321 36.000 0.00 0.00 38.26 1.82
223 224 7.817440 TCTATATGGCCCAACAGGTAAAAATA 58.183 34.615 0.00 0.00 38.26 1.40
224 225 6.976934 ATATGGCCCAACAGGTAAAAATAG 57.023 37.500 0.00 0.00 38.26 1.73
225 226 3.436243 TGGCCCAACAGGTAAAAATAGG 58.564 45.455 0.00 0.00 38.26 2.57
226 227 2.167693 GGCCCAACAGGTAAAAATAGGC 59.832 50.000 0.00 0.00 38.26 3.93
227 228 3.096852 GCCCAACAGGTAAAAATAGGCT 58.903 45.455 0.00 0.00 38.26 4.58
228 229 4.274978 GCCCAACAGGTAAAAATAGGCTA 58.725 43.478 0.00 0.00 38.26 3.93
229 230 4.707934 GCCCAACAGGTAAAAATAGGCTAA 59.292 41.667 0.00 0.00 38.26 3.09
230 231 5.186215 GCCCAACAGGTAAAAATAGGCTAAA 59.814 40.000 0.00 0.00 38.26 1.85
231 232 6.295405 GCCCAACAGGTAAAAATAGGCTAAAA 60.295 38.462 0.00 0.00 38.26 1.52
232 233 7.672240 CCCAACAGGTAAAAATAGGCTAAAAA 58.328 34.615 0.00 0.00 0.00 1.94
252 253 4.551729 GCCCTAGTGCGCCAAATA 57.448 55.556 4.18 0.00 0.00 1.40
253 254 2.321213 GCCCTAGTGCGCCAAATAG 58.679 57.895 4.18 0.00 0.00 1.73
254 255 1.786049 GCCCTAGTGCGCCAAATAGC 61.786 60.000 4.18 0.00 0.00 2.97
255 256 0.463654 CCCTAGTGCGCCAAATAGCA 60.464 55.000 4.18 0.00 41.55 3.49
256 257 0.940126 CCTAGTGCGCCAAATAGCAG 59.060 55.000 4.18 0.00 44.70 4.24
257 258 0.940126 CTAGTGCGCCAAATAGCAGG 59.060 55.000 4.18 0.00 44.70 4.85
258 259 1.095228 TAGTGCGCCAAATAGCAGGC 61.095 55.000 4.18 0.00 44.70 4.85
268 269 4.067896 CCAAATAGCAGGCATACTAGTGG 58.932 47.826 5.39 0.00 0.00 4.00
269 270 4.067896 CAAATAGCAGGCATACTAGTGGG 58.932 47.826 5.39 0.00 0.00 4.61
270 271 1.048601 TAGCAGGCATACTAGTGGGC 58.951 55.000 5.39 10.11 0.00 5.36
271 272 1.227973 GCAGGCATACTAGTGGGCC 60.228 63.158 24.47 24.47 46.77 5.80
274 275 1.451936 GGCATACTAGTGGGCCTGG 59.548 63.158 24.54 0.00 43.09 4.45
275 276 1.227973 GCATACTAGTGGGCCTGGC 60.228 63.158 11.05 11.05 0.00 4.85
298 299 3.316029 GGTGGGCCGTCCTGATTA 58.684 61.111 9.84 0.00 36.20 1.75
299 300 1.146263 GGTGGGCCGTCCTGATTAG 59.854 63.158 9.84 0.00 36.20 1.73
300 301 1.523938 GTGGGCCGTCCTGATTAGC 60.524 63.158 0.00 0.00 36.20 3.09
301 302 1.992834 TGGGCCGTCCTGATTAGCA 60.993 57.895 0.00 0.00 36.20 3.49
302 303 1.227674 GGGCCGTCCTGATTAGCAG 60.228 63.158 0.00 0.00 44.49 4.24
303 304 1.889573 GGCCGTCCTGATTAGCAGC 60.890 63.158 0.00 0.00 43.50 5.25
304 305 1.144936 GCCGTCCTGATTAGCAGCT 59.855 57.895 0.00 0.00 43.50 4.24
305 306 0.462759 GCCGTCCTGATTAGCAGCTT 60.463 55.000 0.00 0.00 43.50 3.74
306 307 1.293924 CCGTCCTGATTAGCAGCTTG 58.706 55.000 0.00 0.00 43.50 4.01
307 308 1.293924 CGTCCTGATTAGCAGCTTGG 58.706 55.000 0.00 0.00 43.50 3.61
308 309 1.020437 GTCCTGATTAGCAGCTTGGC 58.980 55.000 0.00 0.00 43.50 4.52
323 324 4.033776 GGCTGTGCCTGGGCTACA 62.034 66.667 13.05 13.16 46.69 2.74
324 325 2.034066 GCTGTGCCTGGGCTACAA 59.966 61.111 13.05 0.00 42.51 2.41
325 326 2.042831 GCTGTGCCTGGGCTACAAG 61.043 63.158 13.05 6.20 42.51 3.16
326 327 2.034066 TGTGCCTGGGCTACAAGC 59.966 61.111 13.05 0.00 42.51 4.01
327 328 2.352805 GTGCCTGGGCTACAAGCT 59.647 61.111 13.05 0.00 41.99 3.74
328 329 2.042831 GTGCCTGGGCTACAAGCTG 61.043 63.158 13.05 0.00 41.99 4.24
329 330 3.136791 GCCTGGGCTACAAGCTGC 61.137 66.667 4.12 0.00 41.99 5.25
330 331 2.352422 CCTGGGCTACAAGCTGCA 59.648 61.111 1.02 0.00 41.99 4.41
331 332 1.748122 CCTGGGCTACAAGCTGCAG 60.748 63.158 10.11 10.11 41.99 4.41
332 333 2.360350 TGGGCTACAAGCTGCAGC 60.360 61.111 31.53 31.53 41.99 5.25
333 334 2.360350 GGGCTACAAGCTGCAGCA 60.360 61.111 38.24 18.49 38.49 4.41
334 335 1.751927 GGGCTACAAGCTGCAGCAT 60.752 57.895 38.24 26.56 38.49 3.79
335 336 1.432251 GGCTACAAGCTGCAGCATG 59.568 57.895 38.24 36.68 38.49 4.06
353 354 4.794439 CGAGCCGGCATGACACGA 62.794 66.667 31.54 0.00 0.00 4.35
354 355 3.188786 GAGCCGGCATGACACGAC 61.189 66.667 31.54 4.12 0.00 4.34
355 356 4.760047 AGCCGGCATGACACGACC 62.760 66.667 31.54 0.00 0.00 4.79
358 359 4.735132 CGGCATGACACGACCCGT 62.735 66.667 0.00 0.00 42.36 5.28
359 360 2.574929 GGCATGACACGACCCGTA 59.425 61.111 0.00 0.00 38.32 4.02
360 361 1.143183 GGCATGACACGACCCGTAT 59.857 57.895 0.00 0.00 38.32 3.06
361 362 0.386476 GGCATGACACGACCCGTATA 59.614 55.000 0.00 0.00 38.32 1.47
362 363 1.202440 GGCATGACACGACCCGTATAA 60.202 52.381 0.00 0.00 38.32 0.98
363 364 2.547218 GGCATGACACGACCCGTATAAT 60.547 50.000 0.00 0.00 38.32 1.28
364 365 3.305539 GGCATGACACGACCCGTATAATA 60.306 47.826 0.00 0.00 38.32 0.98
365 366 4.300803 GCATGACACGACCCGTATAATAA 58.699 43.478 0.00 0.00 38.32 1.40
366 367 4.927425 GCATGACACGACCCGTATAATAAT 59.073 41.667 0.00 0.00 38.32 1.28
367 368 5.061808 GCATGACACGACCCGTATAATAATC 59.938 44.000 0.00 0.00 38.32 1.75
368 369 5.771153 TGACACGACCCGTATAATAATCA 57.229 39.130 0.00 0.00 38.32 2.57
369 370 6.335471 TGACACGACCCGTATAATAATCAT 57.665 37.500 0.00 0.00 38.32 2.45
370 371 6.153756 TGACACGACCCGTATAATAATCATG 58.846 40.000 0.00 0.00 38.32 3.07
371 372 4.927425 ACACGACCCGTATAATAATCATGC 59.073 41.667 0.00 0.00 38.32 4.06
372 373 4.328983 CACGACCCGTATAATAATCATGCC 59.671 45.833 0.00 0.00 38.32 4.40
373 374 4.222145 ACGACCCGTATAATAATCATGCCT 59.778 41.667 0.00 0.00 38.73 4.75
374 375 5.175859 CGACCCGTATAATAATCATGCCTT 58.824 41.667 0.00 0.00 0.00 4.35
375 376 5.063438 CGACCCGTATAATAATCATGCCTTG 59.937 44.000 0.00 0.00 0.00 3.61
376 377 5.253330 ACCCGTATAATAATCATGCCTTGG 58.747 41.667 0.00 0.00 0.00 3.61
377 378 4.096382 CCCGTATAATAATCATGCCTTGGC 59.904 45.833 4.43 4.43 0.00 4.52
378 379 4.201812 CCGTATAATAATCATGCCTTGGCG 60.202 45.833 7.18 0.00 0.00 5.69
379 380 4.201812 CGTATAATAATCATGCCTTGGCGG 60.202 45.833 7.18 2.14 0.00 6.13
380 381 1.331214 AATAATCATGCCTTGGCGGG 58.669 50.000 7.18 1.78 0.00 6.13
381 382 0.540365 ATAATCATGCCTTGGCGGGG 60.540 55.000 7.18 0.00 0.00 5.73
382 383 1.932156 TAATCATGCCTTGGCGGGGT 61.932 55.000 7.18 0.00 0.00 4.95
383 384 4.738998 TCATGCCTTGGCGGGGTG 62.739 66.667 7.18 3.90 0.00 4.61
409 410 3.497103 TGCCAGACATGATTAGGATGG 57.503 47.619 0.00 0.00 0.00 3.51
410 411 2.107031 TGCCAGACATGATTAGGATGGG 59.893 50.000 0.00 0.00 0.00 4.00
411 412 2.787994 CCAGACATGATTAGGATGGGC 58.212 52.381 0.00 0.00 0.00 5.36
412 413 2.553904 CCAGACATGATTAGGATGGGCC 60.554 54.545 0.00 0.00 0.00 5.80
413 414 1.349026 AGACATGATTAGGATGGGCCG 59.651 52.381 0.00 0.00 43.43 6.13
414 415 0.401738 ACATGATTAGGATGGGCCGG 59.598 55.000 0.00 0.00 43.43 6.13
415 416 0.322816 CATGATTAGGATGGGCCGGG 60.323 60.000 2.18 0.00 43.43 5.73
416 417 2.034221 GATTAGGATGGGCCGGGC 59.966 66.667 22.00 22.00 43.43 6.13
438 439 3.257935 CCCGTTTGGCCAACTATGA 57.742 52.632 20.35 0.00 32.53 2.15
439 440 0.808755 CCCGTTTGGCCAACTATGAC 59.191 55.000 20.35 12.64 32.53 3.06
440 441 1.613255 CCCGTTTGGCCAACTATGACT 60.613 52.381 20.35 0.00 32.53 3.41
441 442 2.159382 CCGTTTGGCCAACTATGACTT 58.841 47.619 20.35 0.00 32.53 3.01
442 443 2.095263 CCGTTTGGCCAACTATGACTTG 60.095 50.000 20.35 3.60 32.53 3.16
443 444 2.552315 CGTTTGGCCAACTATGACTTGT 59.448 45.455 20.35 0.00 32.53 3.16
444 445 3.004315 CGTTTGGCCAACTATGACTTGTT 59.996 43.478 20.35 0.00 32.53 2.83
445 446 4.546570 GTTTGGCCAACTATGACTTGTTC 58.453 43.478 20.35 0.00 31.92 3.18
446 447 3.788227 TGGCCAACTATGACTTGTTCT 57.212 42.857 0.61 0.00 0.00 3.01
447 448 4.901197 TGGCCAACTATGACTTGTTCTA 57.099 40.909 0.61 0.00 0.00 2.10
448 449 4.832248 TGGCCAACTATGACTTGTTCTAG 58.168 43.478 0.61 0.00 0.00 2.43
449 450 4.286032 TGGCCAACTATGACTTGTTCTAGT 59.714 41.667 0.61 0.00 0.00 2.57
450 451 4.870991 GGCCAACTATGACTTGTTCTAGTC 59.129 45.833 0.00 7.29 43.86 2.59
451 452 5.337652 GGCCAACTATGACTTGTTCTAGTCT 60.338 44.000 0.00 4.67 43.92 3.24
452 453 6.127423 GGCCAACTATGACTTGTTCTAGTCTA 60.127 42.308 0.00 3.69 43.92 2.59
453 454 7.418025 GGCCAACTATGACTTGTTCTAGTCTAT 60.418 40.741 0.00 8.96 43.92 1.98
454 455 7.650104 GCCAACTATGACTTGTTCTAGTCTATC 59.350 40.741 13.40 0.00 43.92 2.08
455 456 8.687242 CCAACTATGACTTGTTCTAGTCTATCA 58.313 37.037 13.40 0.00 43.92 2.15
456 457 9.729023 CAACTATGACTTGTTCTAGTCTATCAG 57.271 37.037 13.40 8.60 43.92 2.90
457 458 8.458573 ACTATGACTTGTTCTAGTCTATCAGG 57.541 38.462 13.40 3.91 43.92 3.86
458 459 8.275758 ACTATGACTTGTTCTAGTCTATCAGGA 58.724 37.037 13.40 0.00 43.92 3.86
459 460 7.962995 ATGACTTGTTCTAGTCTATCAGGAA 57.037 36.000 13.40 0.00 43.92 3.36
460 461 7.962995 TGACTTGTTCTAGTCTATCAGGAAT 57.037 36.000 13.40 0.00 43.92 3.01
461 462 7.776107 TGACTTGTTCTAGTCTATCAGGAATG 58.224 38.462 13.40 0.00 43.92 2.67
462 463 6.578023 ACTTGTTCTAGTCTATCAGGAATGC 58.422 40.000 0.00 0.00 0.00 3.56
463 464 5.537300 TGTTCTAGTCTATCAGGAATGCC 57.463 43.478 0.00 0.00 0.00 4.40
465 466 6.373759 TGTTCTAGTCTATCAGGAATGCCTA 58.626 40.000 0.00 0.00 44.80 3.93
466 467 6.839134 TGTTCTAGTCTATCAGGAATGCCTAA 59.161 38.462 0.00 0.00 44.80 2.69
467 468 6.902771 TCTAGTCTATCAGGAATGCCTAAC 57.097 41.667 0.00 0.00 44.80 2.34
468 469 6.373759 TCTAGTCTATCAGGAATGCCTAACA 58.626 40.000 0.00 0.00 44.80 2.41
469 470 5.957771 AGTCTATCAGGAATGCCTAACAA 57.042 39.130 0.00 0.00 44.80 2.83
470 471 6.313519 AGTCTATCAGGAATGCCTAACAAA 57.686 37.500 0.00 0.00 44.80 2.83
471 472 6.904626 AGTCTATCAGGAATGCCTAACAAAT 58.095 36.000 0.00 0.00 44.80 2.32
472 473 7.349598 AGTCTATCAGGAATGCCTAACAAATT 58.650 34.615 0.00 0.00 44.80 1.82
473 474 8.494433 AGTCTATCAGGAATGCCTAACAAATTA 58.506 33.333 0.00 0.00 44.80 1.40
474 475 9.120538 GTCTATCAGGAATGCCTAACAAATTAA 57.879 33.333 0.00 0.00 44.80 1.40
475 476 9.693739 TCTATCAGGAATGCCTAACAAATTAAA 57.306 29.630 0.00 0.00 44.80 1.52
476 477 9.956720 CTATCAGGAATGCCTAACAAATTAAAG 57.043 33.333 0.00 0.00 44.80 1.85
477 478 7.169158 TCAGGAATGCCTAACAAATTAAAGG 57.831 36.000 0.00 0.00 44.80 3.11
487 488 8.600449 CCTAACAAATTAAAGGCACATTTCAA 57.400 30.769 0.00 0.00 0.00 2.69
488 489 9.050601 CCTAACAAATTAAAGGCACATTTCAAA 57.949 29.630 0.00 0.00 0.00 2.69
491 492 8.273780 ACAAATTAAAGGCACATTTCAAAACA 57.726 26.923 0.00 0.00 0.00 2.83
492 493 8.901793 ACAAATTAAAGGCACATTTCAAAACAT 58.098 25.926 0.00 0.00 0.00 2.71
493 494 9.733219 CAAATTAAAGGCACATTTCAAAACATT 57.267 25.926 0.00 0.00 0.00 2.71
494 495 9.949174 AAATTAAAGGCACATTTCAAAACATTC 57.051 25.926 0.00 0.00 0.00 2.67
495 496 7.489574 TTAAAGGCACATTTCAAAACATTCC 57.510 32.000 0.00 0.00 0.00 3.01
496 497 4.686191 AGGCACATTTCAAAACATTCCA 57.314 36.364 0.00 0.00 0.00 3.53
497 498 4.379652 AGGCACATTTCAAAACATTCCAC 58.620 39.130 0.00 0.00 0.00 4.02
498 499 4.125703 GGCACATTTCAAAACATTCCACA 58.874 39.130 0.00 0.00 0.00 4.17
499 500 4.756135 GGCACATTTCAAAACATTCCACAT 59.244 37.500 0.00 0.00 0.00 3.21
500 501 5.106987 GGCACATTTCAAAACATTCCACATC 60.107 40.000 0.00 0.00 0.00 3.06
501 502 5.466058 GCACATTTCAAAACATTCCACATCA 59.534 36.000 0.00 0.00 0.00 3.07
502 503 6.148150 GCACATTTCAAAACATTCCACATCAT 59.852 34.615 0.00 0.00 0.00 2.45
503 504 7.331440 GCACATTTCAAAACATTCCACATCATA 59.669 33.333 0.00 0.00 0.00 2.15
504 505 8.649841 CACATTTCAAAACATTCCACATCATAC 58.350 33.333 0.00 0.00 0.00 2.39
505 506 8.366401 ACATTTCAAAACATTCCACATCATACA 58.634 29.630 0.00 0.00 0.00 2.29
506 507 9.205719 CATTTCAAAACATTCCACATCATACAA 57.794 29.630 0.00 0.00 0.00 2.41
507 508 8.815141 TTTCAAAACATTCCACATCATACAAG 57.185 30.769 0.00 0.00 0.00 3.16
508 509 6.389091 TCAAAACATTCCACATCATACAAGC 58.611 36.000 0.00 0.00 0.00 4.01
509 510 6.209192 TCAAAACATTCCACATCATACAAGCT 59.791 34.615 0.00 0.00 0.00 3.74
510 511 7.392953 TCAAAACATTCCACATCATACAAGCTA 59.607 33.333 0.00 0.00 0.00 3.32
511 512 6.683974 AACATTCCACATCATACAAGCTAC 57.316 37.500 0.00 0.00 0.00 3.58
512 513 5.126067 ACATTCCACATCATACAAGCTACC 58.874 41.667 0.00 0.00 0.00 3.18
513 514 3.452755 TCCACATCATACAAGCTACCG 57.547 47.619 0.00 0.00 0.00 4.02
514 515 3.028130 TCCACATCATACAAGCTACCGA 58.972 45.455 0.00 0.00 0.00 4.69
515 516 3.449377 TCCACATCATACAAGCTACCGAA 59.551 43.478 0.00 0.00 0.00 4.30
516 517 3.555956 CCACATCATACAAGCTACCGAAC 59.444 47.826 0.00 0.00 0.00 3.95
517 518 4.180817 CACATCATACAAGCTACCGAACA 58.819 43.478 0.00 0.00 0.00 3.18
518 519 4.629634 CACATCATACAAGCTACCGAACAA 59.370 41.667 0.00 0.00 0.00 2.83
519 520 4.870426 ACATCATACAAGCTACCGAACAAG 59.130 41.667 0.00 0.00 0.00 3.16
520 521 4.530710 TCATACAAGCTACCGAACAAGT 57.469 40.909 0.00 0.00 0.00 3.16
521 522 5.648178 TCATACAAGCTACCGAACAAGTA 57.352 39.130 0.00 0.00 0.00 2.24
522 523 6.028146 TCATACAAGCTACCGAACAAGTAA 57.972 37.500 0.00 0.00 0.00 2.24
523 524 6.457355 TCATACAAGCTACCGAACAAGTAAA 58.543 36.000 0.00 0.00 0.00 2.01
524 525 6.930164 TCATACAAGCTACCGAACAAGTAAAA 59.070 34.615 0.00 0.00 0.00 1.52
525 526 7.441760 TCATACAAGCTACCGAACAAGTAAAAA 59.558 33.333 0.00 0.00 0.00 1.94
526 527 6.056428 ACAAGCTACCGAACAAGTAAAAAG 57.944 37.500 0.00 0.00 0.00 2.27
527 528 5.818857 ACAAGCTACCGAACAAGTAAAAAGA 59.181 36.000 0.00 0.00 0.00 2.52
528 529 6.316890 ACAAGCTACCGAACAAGTAAAAAGAA 59.683 34.615 0.00 0.00 0.00 2.52
529 530 6.930667 AGCTACCGAACAAGTAAAAAGAAA 57.069 33.333 0.00 0.00 0.00 2.52
530 531 7.324354 AGCTACCGAACAAGTAAAAAGAAAA 57.676 32.000 0.00 0.00 0.00 2.29
531 532 7.415229 AGCTACCGAACAAGTAAAAAGAAAAG 58.585 34.615 0.00 0.00 0.00 2.27
532 533 7.281549 AGCTACCGAACAAGTAAAAAGAAAAGA 59.718 33.333 0.00 0.00 0.00 2.52
533 534 8.074370 GCTACCGAACAAGTAAAAAGAAAAGAT 58.926 33.333 0.00 0.00 0.00 2.40
534 535 9.382244 CTACCGAACAAGTAAAAAGAAAAGATG 57.618 33.333 0.00 0.00 0.00 2.90
535 536 7.992008 ACCGAACAAGTAAAAAGAAAAGATGA 58.008 30.769 0.00 0.00 0.00 2.92
536 537 8.630037 ACCGAACAAGTAAAAAGAAAAGATGAT 58.370 29.630 0.00 0.00 0.00 2.45
537 538 9.463443 CCGAACAAGTAAAAAGAAAAGATGATT 57.537 29.630 0.00 0.00 0.00 2.57
543 544 9.959749 AAGTAAAAAGAAAAGATGATTAACGCA 57.040 25.926 0.00 0.00 0.00 5.24
544 545 9.612620 AGTAAAAAGAAAAGATGATTAACGCAG 57.387 29.630 0.00 0.00 0.00 5.18
557 558 2.840974 ACGCAGTTTCATTCCGGAG 58.159 52.632 3.34 0.00 37.78 4.63
574 575 2.550208 CGGAGAGCTTAAGTTTGGGTGT 60.550 50.000 4.02 0.00 0.00 4.16
577 578 4.134563 GAGAGCTTAAGTTTGGGTGTTGA 58.865 43.478 4.02 0.00 0.00 3.18
580 581 5.705905 AGAGCTTAAGTTTGGGTGTTGATAC 59.294 40.000 4.02 0.00 0.00 2.24
587 588 4.060205 GTTTGGGTGTTGATACTGTACGT 58.940 43.478 0.00 0.00 0.00 3.57
594 595 6.349280 GGGTGTTGATACTGTACGTGTACTTA 60.349 42.308 11.14 3.78 37.00 2.24
610 611 4.971830 TGTACTTATATTGTACGCACGCTC 59.028 41.667 11.52 0.00 42.09 5.03
611 612 4.036567 ACTTATATTGTACGCACGCTCA 57.963 40.909 0.00 0.00 0.00 4.26
612 613 3.795101 ACTTATATTGTACGCACGCTCAC 59.205 43.478 0.00 0.00 0.00 3.51
613 614 8.207112 GTACTTATATTGTACGCACGCTCACG 62.207 46.154 0.00 0.00 36.95 4.35
614 615 1.407721 TATTGTACGCACGCTCACGC 61.408 55.000 0.00 0.00 45.53 5.34
615 616 3.719471 TATTGTACGCACGCTCACGCT 62.719 52.381 0.00 0.00 45.53 5.07
616 617 3.103911 GTACGCACGCTCACGCTT 61.104 61.111 0.00 0.00 45.53 4.68
617 618 3.103289 TACGCACGCTCACGCTTG 61.103 61.111 0.00 0.00 45.53 4.01
633 634 3.186119 CGCTTGGTGTCACAAAAACATT 58.814 40.909 5.12 0.00 0.00 2.71
636 637 5.390356 CGCTTGGTGTCACAAAAACATTTTT 60.390 36.000 5.12 0.00 40.75 1.94
643 646 9.885934 GGTGTCACAAAAACATTTTTAAAAAGT 57.114 25.926 17.72 12.77 38.23 2.66
654 657 9.965748 AACATTTTTAAAAAGTTCACAATCACG 57.034 25.926 17.72 0.00 0.00 4.35
659 662 8.918961 TTTAAAAAGTTCACAATCACGACAAT 57.081 26.923 0.00 0.00 0.00 2.71
660 663 8.918961 TTAAAAAGTTCACAATCACGACAATT 57.081 26.923 0.00 0.00 0.00 2.32
661 664 7.826260 AAAAAGTTCACAATCACGACAATTT 57.174 28.000 0.00 0.00 0.00 1.82
663 666 7.826260 AAAGTTCACAATCACGACAATTTTT 57.174 28.000 0.00 0.00 0.00 1.94
732 737 4.078516 GCGTAACCCCCACGAGCT 62.079 66.667 0.00 0.00 41.91 4.09
751 756 2.996734 CCGCCCAACAGCCCAAAT 60.997 61.111 0.00 0.00 0.00 2.32
771 776 4.742201 TTGGAGCTCGCGCCTGAC 62.742 66.667 12.76 0.00 36.82 3.51
794 799 1.154301 CGAAATTTGCGACCCACCG 60.154 57.895 0.00 0.00 0.00 4.94
869 876 3.458163 GGATCGCCGTCCTGACCA 61.458 66.667 0.00 0.00 35.32 4.02
877 884 1.391933 CCGTCCTGACCATCCGATCA 61.392 60.000 0.00 0.00 0.00 2.92
979 1003 1.000896 CAACCCATCACCACCCCTC 60.001 63.158 0.00 0.00 0.00 4.30
1257 1296 3.299977 ACCTACACCGAGCACGCA 61.300 61.111 0.00 0.00 38.29 5.24
1290 1329 4.735132 ACCGCCATGGACGTCGTG 62.735 66.667 18.40 10.79 42.00 4.35
1379 1426 2.254350 CGTCAGTCTTCGTCGCCA 59.746 61.111 0.00 0.00 0.00 5.69
1493 1540 6.204301 CCTCTGTATGTTTAGCTGAATCATGG 59.796 42.308 13.04 5.37 31.34 3.66
1559 1611 3.129988 CCTGCATCCCTTGTCTTGAATTC 59.870 47.826 0.00 0.00 0.00 2.17
1582 1639 0.179179 GCAAATGCTGCGTTCCTCTC 60.179 55.000 7.67 0.00 42.37 3.20
1583 1640 0.449388 CAAATGCTGCGTTCCTCTCC 59.551 55.000 7.67 0.00 0.00 3.71
1587 1644 0.108585 TGCTGCGTTCCTCTCCTTTT 59.891 50.000 0.00 0.00 0.00 2.27
1611 1668 1.798223 TGAAAGTTCGTGCGAGATTGG 59.202 47.619 0.00 0.00 0.00 3.16
1615 1672 0.716108 GTTCGTGCGAGATTGGTCTG 59.284 55.000 0.00 0.00 33.97 3.51
1617 1674 0.171231 TCGTGCGAGATTGGTCTGAG 59.829 55.000 0.00 0.00 33.97 3.35
1647 1706 4.201647 GCATTTCAGATGAACAAATTGGCG 60.202 41.667 0.00 0.00 33.13 5.69
1658 1717 0.737019 AAATTGGCGGCGCAAATCAG 60.737 50.000 32.42 0.00 29.96 2.90
1672 1731 4.271049 CGCAAATCAGGATATCGTTCAGTT 59.729 41.667 0.00 0.00 0.00 3.16
1673 1732 5.462068 CGCAAATCAGGATATCGTTCAGTTA 59.538 40.000 0.00 0.00 0.00 2.24
1680 1739 7.210174 TCAGGATATCGTTCAGTTAAATCCAG 58.790 38.462 0.00 0.00 35.02 3.86
1681 1740 6.425114 CAGGATATCGTTCAGTTAAATCCAGG 59.575 42.308 0.00 0.00 35.02 4.45
1686 1745 3.125316 CGTTCAGTTAAATCCAGGAGCAC 59.875 47.826 0.00 0.00 0.00 4.40
1727 1787 1.045407 AGCACTCTGTTCCGTAACCA 58.955 50.000 0.00 0.00 34.49 3.67
1742 1802 5.041940 CCGTAACCAGCTTATCAGTAGAAC 58.958 45.833 0.00 0.00 0.00 3.01
1819 1886 2.286826 TGGGAACATGAGGACCTCG 58.713 57.895 16.81 5.95 30.80 4.63
1820 1887 0.544357 TGGGAACATGAGGACCTCGT 60.544 55.000 16.81 13.88 30.80 4.18
1829 1896 1.000506 TGAGGACCTCGTGTGCTTTAC 59.999 52.381 16.81 0.00 46.85 2.01
1832 1899 1.623973 GACCTCGTGTGCTTTACGGC 61.624 60.000 7.81 0.00 41.58 5.68
1917 1985 3.119137 ACATTTCAGATAAAAAGGGGCGC 60.119 43.478 0.00 0.00 0.00 6.53
1922 1990 2.166254 CAGATAAAAAGGGGCGCATTGT 59.834 45.455 10.83 0.00 0.00 2.71
2016 2084 3.490348 CTCAAGGGTCCTGTGAATTGTT 58.510 45.455 0.00 0.00 0.00 2.83
2018 2086 5.055265 TCAAGGGTCCTGTGAATTGTTTA 57.945 39.130 0.00 0.00 0.00 2.01
2101 2169 8.959548 TGAGAACACATAATACAGATTGCAAAT 58.040 29.630 1.71 0.00 0.00 2.32
2187 2258 4.098914 ACTGGCATGTAAACTTCAGGAA 57.901 40.909 0.00 0.00 0.00 3.36
2197 2268 6.646267 TGTAAACTTCAGGAACGCCTATTAT 58.354 36.000 0.00 0.00 44.80 1.28
2198 2269 6.537301 TGTAAACTTCAGGAACGCCTATTATG 59.463 38.462 0.00 0.00 44.80 1.90
2199 2270 5.353394 AACTTCAGGAACGCCTATTATGA 57.647 39.130 0.00 0.00 44.80 2.15
2200 2271 5.353394 ACTTCAGGAACGCCTATTATGAA 57.647 39.130 0.00 0.00 44.80 2.57
2201 2272 5.741011 ACTTCAGGAACGCCTATTATGAAA 58.259 37.500 0.00 0.00 44.80 2.69
2202 2273 5.585047 ACTTCAGGAACGCCTATTATGAAAC 59.415 40.000 0.00 0.00 44.80 2.78
2203 2274 5.353394 TCAGGAACGCCTATTATGAAACT 57.647 39.130 0.00 0.00 44.80 2.66
2204 2275 5.116180 TCAGGAACGCCTATTATGAAACTG 58.884 41.667 0.00 0.00 44.80 3.16
2205 2276 5.105106 TCAGGAACGCCTATTATGAAACTGA 60.105 40.000 0.00 0.00 44.80 3.41
2206 2277 5.584649 CAGGAACGCCTATTATGAAACTGAA 59.415 40.000 0.00 0.00 44.80 3.02
2207 2278 6.260936 CAGGAACGCCTATTATGAAACTGAAT 59.739 38.462 0.00 0.00 44.80 2.57
2208 2279 7.441157 CAGGAACGCCTATTATGAAACTGAATA 59.559 37.037 0.00 0.00 44.80 1.75
2209 2280 7.990886 AGGAACGCCTATTATGAAACTGAATAA 59.009 33.333 0.00 0.00 44.74 1.40
2210 2281 8.784043 GGAACGCCTATTATGAAACTGAATAAT 58.216 33.333 0.00 0.00 34.27 1.28
2251 2322 2.288666 GTGGTGCAAACAGTCTGAAGA 58.711 47.619 6.91 0.00 0.00 2.87
2267 2338 7.812191 CAGTCTGAAGATAGGATACAAGCATAC 59.188 40.741 0.00 0.00 41.41 2.39
2271 2342 3.832490 AGATAGGATACAAGCATACGCCA 59.168 43.478 0.00 0.00 37.94 5.69
2315 2386 5.683681 TGTTAAAAACTACTCCCTCCGTTT 58.316 37.500 0.00 0.00 0.00 3.60
2317 2388 4.426736 AAAAACTACTCCCTCCGTTTCA 57.573 40.909 0.00 0.00 0.00 2.69
2319 2390 4.426736 AAACTACTCCCTCCGTTTCAAA 57.573 40.909 0.00 0.00 0.00 2.69
2320 2391 4.426736 AACTACTCCCTCCGTTTCAAAA 57.573 40.909 0.00 0.00 0.00 2.44
2323 2394 5.731591 ACTACTCCCTCCGTTTCAAAATAG 58.268 41.667 0.00 0.00 0.00 1.73
2324 2395 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
2325 2396 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
2327 2398 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
2329 2400 4.335594 CCCTCCGTTTCAAAATAGATGACC 59.664 45.833 0.00 0.00 0.00 4.02
2330 2401 4.335594 CCTCCGTTTCAAAATAGATGACCC 59.664 45.833 0.00 0.00 0.00 4.46
2332 2403 3.936453 CCGTTTCAAAATAGATGACCCGA 59.064 43.478 0.00 0.00 0.00 5.14
2333 2404 4.201783 CCGTTTCAAAATAGATGACCCGAC 60.202 45.833 0.00 0.00 0.00 4.79
2338 2409 8.674607 GTTTCAAAATAGATGACCCGACTTTAT 58.325 33.333 0.00 0.00 0.00 1.40
2339 2410 9.893634 TTTCAAAATAGATGACCCGACTTTATA 57.106 29.630 0.00 0.00 0.00 0.98
2340 2411 8.882415 TCAAAATAGATGACCCGACTTTATAC 57.118 34.615 0.00 0.00 0.00 1.47
2341 2412 8.701895 TCAAAATAGATGACCCGACTTTATACT 58.298 33.333 0.00 0.00 0.00 2.12
2348 2419 9.326413 AGATGACCCGACTTTATACTAAATTTG 57.674 33.333 0.00 0.00 0.00 2.32
2349 2420 9.106070 GATGACCCGACTTTATACTAAATTTGT 57.894 33.333 0.00 0.00 0.00 2.83
2351 2422 9.369904 TGACCCGACTTTATACTAAATTTGTAC 57.630 33.333 0.00 0.00 0.00 2.90
2352 2423 9.591792 GACCCGACTTTATACTAAATTTGTACT 57.408 33.333 0.00 0.00 0.00 2.73
2397 2468 2.093128 TCTATTTTGGAACGGAGGGAGC 60.093 50.000 0.00 0.00 0.00 4.70
2410 2483 1.449601 GGGAGCATGTGTACACCGG 60.450 63.158 22.91 15.40 0.00 5.28
2413 2486 1.635663 GAGCATGTGTACACCGGTGC 61.636 60.000 34.26 27.20 35.12 5.01
2414 2487 1.963855 GCATGTGTACACCGGTGCA 60.964 57.895 34.26 23.38 37.29 4.57
2433 2506 5.409520 GGTGCAGAAAAGAAATGGAAAATCC 59.590 40.000 0.00 0.00 36.96 3.01
2456 2529 3.482156 AGTATCAAGTATGGGCAGCAG 57.518 47.619 0.00 0.00 0.00 4.24
2461 2534 0.184451 AAGTATGGGCAGCAGGATGG 59.816 55.000 0.00 0.00 35.86 3.51
2472 2545 1.630369 AGCAGGATGGCTGAAGTAACA 59.370 47.619 0.00 0.00 43.89 2.41
2483 2556 8.663209 ATGGCTGAAGTAACATAGAGATAGAT 57.337 34.615 0.00 0.00 0.00 1.98
2509 2582 1.450360 AGTTCCTCCCCAAAGCTTCT 58.550 50.000 0.00 0.00 0.00 2.85
2510 2583 1.074566 AGTTCCTCCCCAAAGCTTCTG 59.925 52.381 0.00 0.32 0.00 3.02
2511 2584 0.405585 TTCCTCCCCAAAGCTTCTGG 59.594 55.000 16.37 16.37 0.00 3.86
2512 2585 0.475632 TCCTCCCCAAAGCTTCTGGA 60.476 55.000 21.94 16.38 35.85 3.86
2513 2586 0.405585 CCTCCCCAAAGCTTCTGGAA 59.594 55.000 21.94 12.52 35.85 3.53
2514 2587 1.615384 CCTCCCCAAAGCTTCTGGAAG 60.615 57.143 21.94 18.17 41.24 3.46
2515 2588 1.074566 CTCCCCAAAGCTTCTGGAAGT 59.925 52.381 21.94 0.00 40.45 3.01
2516 2589 2.305927 CTCCCCAAAGCTTCTGGAAGTA 59.694 50.000 21.94 8.83 40.45 2.24
2517 2590 2.919602 TCCCCAAAGCTTCTGGAAGTAT 59.080 45.455 21.94 0.00 40.45 2.12
2518 2591 3.019564 CCCCAAAGCTTCTGGAAGTATG 58.980 50.000 21.94 5.80 40.45 2.39
2519 2592 3.308402 CCCCAAAGCTTCTGGAAGTATGA 60.308 47.826 21.94 0.00 40.45 2.15
2520 2593 4.335416 CCCAAAGCTTCTGGAAGTATGAA 58.665 43.478 21.94 0.00 40.45 2.57
2521 2594 4.397417 CCCAAAGCTTCTGGAAGTATGAAG 59.603 45.833 21.94 0.00 40.45 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.758931 GGCACGTCCCATTTGGCC 61.759 66.667 0.00 0.00 0.00 5.36
1 2 2.569354 TTGGCACGTCCCATTTGGC 61.569 57.895 0.00 0.00 34.21 4.52
2 3 1.288752 GTTGGCACGTCCCATTTGG 59.711 57.895 0.00 0.00 34.21 3.28
3 4 1.288752 GGTTGGCACGTCCCATTTG 59.711 57.895 0.00 0.00 34.21 2.32
4 5 1.152652 TGGTTGGCACGTCCCATTT 60.153 52.632 0.00 0.00 34.21 2.32
5 6 1.603455 CTGGTTGGCACGTCCCATT 60.603 57.895 0.00 0.00 34.21 3.16
6 7 2.034066 CTGGTTGGCACGTCCCAT 59.966 61.111 0.00 0.00 34.21 4.00
7 8 4.263572 CCTGGTTGGCACGTCCCA 62.264 66.667 0.00 0.00 0.00 4.37
63 64 2.595617 TTTAGCGCGTGCCATGCATG 62.596 55.000 20.19 20.19 46.98 4.06
64 65 2.405805 TTTAGCGCGTGCCATGCAT 61.406 52.632 19.02 0.00 41.91 3.96
65 66 3.052686 TTTAGCGCGTGCCATGCA 61.053 55.556 19.02 0.00 44.31 3.96
66 67 2.576847 GTTTAGCGCGTGCCATGC 60.577 61.111 19.02 0.00 44.31 4.06
67 68 2.276617 CGTTTAGCGCGTGCCATG 60.277 61.111 19.02 3.68 44.31 3.66
68 69 3.496131 CCGTTTAGCGCGTGCCAT 61.496 61.111 19.02 1.99 44.31 4.40
71 72 4.143363 GACCCGTTTAGCGCGTGC 62.143 66.667 14.39 14.39 43.24 5.34
72 73 3.834373 CGACCCGTTTAGCGCGTG 61.834 66.667 8.43 0.00 39.71 5.34
97 98 2.981909 CCTAGGGCATGCCGCATG 60.982 66.667 29.90 26.13 45.17 4.06
108 109 4.489771 CCCAAGCACGGCCTAGGG 62.490 72.222 11.72 0.00 0.00 3.53
115 116 2.821366 CTAGCAGCCCAAGCACGG 60.821 66.667 0.00 0.00 43.56 4.94
116 117 2.821366 CCTAGCAGCCCAAGCACG 60.821 66.667 0.00 0.00 43.56 5.34
117 118 3.136791 GCCTAGCAGCCCAAGCAC 61.137 66.667 0.00 0.00 43.56 4.40
118 119 3.333219 AGCCTAGCAGCCCAAGCA 61.333 61.111 0.00 0.00 43.56 3.91
119 120 2.827642 CAGCCTAGCAGCCCAAGC 60.828 66.667 0.00 0.00 40.32 4.01
120 121 1.153208 CTCAGCCTAGCAGCCCAAG 60.153 63.158 0.00 0.00 0.00 3.61
121 122 2.993008 CTCAGCCTAGCAGCCCAA 59.007 61.111 0.00 0.00 0.00 4.12
122 123 3.790437 GCTCAGCCTAGCAGCCCA 61.790 66.667 3.11 0.00 42.30 5.36
129 130 4.880537 CCCGCGTGCTCAGCCTAG 62.881 72.222 4.92 0.00 0.00 3.02
150 151 1.373590 ATAATCGGGTTGTGCCGTGC 61.374 55.000 0.00 0.00 38.44 5.34
151 152 0.655733 GATAATCGGGTTGTGCCGTG 59.344 55.000 0.00 0.00 38.44 4.94
152 153 0.539986 AGATAATCGGGTTGTGCCGT 59.460 50.000 0.00 0.00 38.44 5.68
153 154 1.663695 AAGATAATCGGGTTGTGCCG 58.336 50.000 0.00 0.00 38.44 5.69
154 155 7.448748 AATAATAAGATAATCGGGTTGTGCC 57.551 36.000 0.00 0.00 0.00 5.01
155 156 9.744468 AAAAATAATAAGATAATCGGGTTGTGC 57.256 29.630 0.00 0.00 0.00 4.57
183 184 8.376270 GGGCCATATAGAGAGTACATAAAAAGT 58.624 37.037 4.39 0.00 0.00 2.66
184 185 8.375506 TGGGCCATATAGAGAGTACATAAAAAG 58.624 37.037 0.00 0.00 0.00 2.27
185 186 8.270137 TGGGCCATATAGAGAGTACATAAAAA 57.730 34.615 0.00 0.00 0.00 1.94
186 187 7.865530 TGGGCCATATAGAGAGTACATAAAA 57.134 36.000 0.00 0.00 0.00 1.52
187 188 7.291416 TGTTGGGCCATATAGAGAGTACATAAA 59.709 37.037 7.26 0.00 0.00 1.40
188 189 6.785466 TGTTGGGCCATATAGAGAGTACATAA 59.215 38.462 7.26 0.00 0.00 1.90
189 190 6.319715 TGTTGGGCCATATAGAGAGTACATA 58.680 40.000 7.26 0.00 0.00 2.29
190 191 5.155161 TGTTGGGCCATATAGAGAGTACAT 58.845 41.667 7.26 0.00 0.00 2.29
191 192 4.552674 TGTTGGGCCATATAGAGAGTACA 58.447 43.478 7.26 0.82 0.00 2.90
192 193 4.021016 CCTGTTGGGCCATATAGAGAGTAC 60.021 50.000 7.26 0.00 0.00 2.73
193 194 4.160329 CCTGTTGGGCCATATAGAGAGTA 58.840 47.826 7.26 0.00 0.00 2.59
194 195 2.975489 CCTGTTGGGCCATATAGAGAGT 59.025 50.000 7.26 0.00 0.00 3.24
195 196 2.975489 ACCTGTTGGGCCATATAGAGAG 59.025 50.000 7.26 0.00 39.10 3.20
196 197 3.060479 ACCTGTTGGGCCATATAGAGA 57.940 47.619 7.26 0.00 39.10 3.10
197 198 4.974645 TTACCTGTTGGGCCATATAGAG 57.025 45.455 7.26 0.00 39.10 2.43
198 199 5.718801 TTTTACCTGTTGGGCCATATAGA 57.281 39.130 7.26 0.00 39.10 1.98
199 200 6.976934 ATTTTTACCTGTTGGGCCATATAG 57.023 37.500 7.26 6.12 39.10 1.31
200 201 7.007723 CCTATTTTTACCTGTTGGGCCATATA 58.992 38.462 7.26 0.00 39.10 0.86
201 202 5.838521 CCTATTTTTACCTGTTGGGCCATAT 59.161 40.000 7.26 0.00 39.10 1.78
202 203 5.205056 CCTATTTTTACCTGTTGGGCCATA 58.795 41.667 7.26 0.00 39.10 2.74
203 204 4.030216 CCTATTTTTACCTGTTGGGCCAT 58.970 43.478 7.26 0.00 39.10 4.40
204 205 3.436243 CCTATTTTTACCTGTTGGGCCA 58.564 45.455 0.00 0.00 39.10 5.36
205 206 2.167693 GCCTATTTTTACCTGTTGGGCC 59.832 50.000 0.00 0.00 39.10 5.80
206 207 3.096852 AGCCTATTTTTACCTGTTGGGC 58.903 45.455 0.00 0.00 39.10 5.36
207 208 6.844097 TTTAGCCTATTTTTACCTGTTGGG 57.156 37.500 0.00 0.00 41.89 4.12
236 237 0.463654 TGCTATTTGGCGCACTAGGG 60.464 55.000 10.83 0.00 34.52 3.53
237 238 0.940126 CTGCTATTTGGCGCACTAGG 59.060 55.000 10.83 0.00 34.52 3.02
238 239 0.940126 CCTGCTATTTGGCGCACTAG 59.060 55.000 10.83 5.08 34.52 2.57
239 240 1.095228 GCCTGCTATTTGGCGCACTA 61.095 55.000 10.83 0.00 39.71 2.74
240 241 2.409870 GCCTGCTATTTGGCGCACT 61.410 57.895 10.83 0.00 39.71 4.40
241 242 2.102946 GCCTGCTATTTGGCGCAC 59.897 61.111 10.83 0.00 39.71 5.34
246 247 4.067896 CCACTAGTATGCCTGCTATTTGG 58.932 47.826 0.00 2.30 0.00 3.28
247 248 4.067896 CCCACTAGTATGCCTGCTATTTG 58.932 47.826 0.00 0.00 0.00 2.32
248 249 3.496870 GCCCACTAGTATGCCTGCTATTT 60.497 47.826 0.00 0.00 0.00 1.40
249 250 2.039084 GCCCACTAGTATGCCTGCTATT 59.961 50.000 0.00 0.00 0.00 1.73
250 251 1.625818 GCCCACTAGTATGCCTGCTAT 59.374 52.381 0.00 0.00 0.00 2.97
251 252 1.048601 GCCCACTAGTATGCCTGCTA 58.951 55.000 0.00 0.00 0.00 3.49
252 253 1.700042 GGCCCACTAGTATGCCTGCT 61.700 60.000 21.76 0.00 40.77 4.24
253 254 1.227973 GGCCCACTAGTATGCCTGC 60.228 63.158 21.76 7.86 40.77 4.85
256 257 1.451936 CCAGGCCCACTAGTATGCC 59.548 63.158 21.59 21.59 44.35 4.40
257 258 1.227973 GCCAGGCCCACTAGTATGC 60.228 63.158 0.00 0.61 0.00 3.14
258 259 1.451936 GGCCAGGCCCACTAGTATG 59.548 63.158 21.62 0.00 44.06 2.39
259 260 3.987638 GGCCAGGCCCACTAGTAT 58.012 61.111 21.62 0.00 44.06 2.12
281 282 1.146263 CTAATCAGGACGGCCCACC 59.854 63.158 1.76 0.00 37.41 4.61
282 283 1.523938 GCTAATCAGGACGGCCCAC 60.524 63.158 1.76 0.00 37.41 4.61
283 284 1.971505 CTGCTAATCAGGACGGCCCA 61.972 60.000 1.76 0.00 39.15 5.36
284 285 1.227674 CTGCTAATCAGGACGGCCC 60.228 63.158 1.76 0.00 39.15 5.80
285 286 1.889573 GCTGCTAATCAGGACGGCC 60.890 63.158 0.00 0.00 43.06 6.13
286 287 0.462759 AAGCTGCTAATCAGGACGGC 60.463 55.000 0.90 0.00 43.06 5.68
287 288 1.293924 CAAGCTGCTAATCAGGACGG 58.706 55.000 0.90 0.00 43.06 4.79
288 289 1.293924 CCAAGCTGCTAATCAGGACG 58.706 55.000 0.90 0.00 43.06 4.79
289 290 1.020437 GCCAAGCTGCTAATCAGGAC 58.980 55.000 0.90 0.00 43.06 3.85
290 291 0.914644 AGCCAAGCTGCTAATCAGGA 59.085 50.000 0.90 0.00 43.06 3.86
291 292 3.491208 AGCCAAGCTGCTAATCAGG 57.509 52.632 0.90 1.64 43.06 3.86
307 308 2.034066 TTGTAGCCCAGGCACAGC 59.966 61.111 12.03 0.00 44.88 4.40
308 309 2.042831 GCTTGTAGCCCAGGCACAG 61.043 63.158 12.03 8.32 45.05 3.66
309 310 2.034066 GCTTGTAGCCCAGGCACA 59.966 61.111 12.03 10.28 45.05 4.57
312 313 3.136791 GCAGCTTGTAGCCCAGGC 61.137 66.667 0.00 0.00 43.77 4.85
313 314 1.748122 CTGCAGCTTGTAGCCCAGG 60.748 63.158 0.00 0.00 43.77 4.45
314 315 3.900855 CTGCAGCTTGTAGCCCAG 58.099 61.111 0.00 0.00 43.77 4.45
319 320 1.062047 CGCATGCTGCAGCTTGTAG 59.938 57.895 39.05 31.84 45.36 2.74
320 321 1.363885 CTCGCATGCTGCAGCTTGTA 61.364 55.000 39.05 30.10 45.36 2.41
321 322 2.670592 TCGCATGCTGCAGCTTGT 60.671 55.556 39.05 24.85 45.36 3.16
322 323 2.100410 CTCGCATGCTGCAGCTTG 59.900 61.111 37.21 37.21 45.36 4.01
323 324 3.812019 GCTCGCATGCTGCAGCTT 61.812 61.111 36.61 28.85 45.36 3.74
336 337 4.794439 TCGTGTCATGCCGGCTCG 62.794 66.667 29.70 18.68 0.00 5.03
337 338 3.188786 GTCGTGTCATGCCGGCTC 61.189 66.667 29.70 15.44 0.00 4.70
338 339 4.760047 GGTCGTGTCATGCCGGCT 62.760 66.667 29.70 10.60 0.00 5.52
341 342 2.622903 ATACGGGTCGTGTCATGCCG 62.623 60.000 8.94 8.94 41.39 5.69
342 343 0.386476 TATACGGGTCGTGTCATGCC 59.614 55.000 3.03 0.00 41.39 4.40
343 344 2.212869 TTATACGGGTCGTGTCATGC 57.787 50.000 3.03 0.00 41.39 4.06
344 345 6.153756 TGATTATTATACGGGTCGTGTCATG 58.846 40.000 3.03 0.00 41.39 3.07
345 346 6.335471 TGATTATTATACGGGTCGTGTCAT 57.665 37.500 3.03 0.00 41.39 3.06
346 347 5.771153 TGATTATTATACGGGTCGTGTCA 57.229 39.130 3.03 0.00 41.39 3.58
347 348 5.061808 GCATGATTATTATACGGGTCGTGTC 59.938 44.000 0.00 0.00 41.39 3.67
348 349 4.927425 GCATGATTATTATACGGGTCGTGT 59.073 41.667 0.00 0.00 41.39 4.49
349 350 4.328983 GGCATGATTATTATACGGGTCGTG 59.671 45.833 0.00 0.00 41.39 4.35
350 351 4.222145 AGGCATGATTATTATACGGGTCGT 59.778 41.667 0.00 0.00 44.35 4.34
351 352 4.755411 AGGCATGATTATTATACGGGTCG 58.245 43.478 0.00 0.00 0.00 4.79
352 353 5.354234 CCAAGGCATGATTATTATACGGGTC 59.646 44.000 0.00 0.00 0.00 4.46
353 354 5.253330 CCAAGGCATGATTATTATACGGGT 58.747 41.667 0.00 0.00 0.00 5.28
354 355 4.096382 GCCAAGGCATGATTATTATACGGG 59.904 45.833 6.14 0.00 41.49 5.28
355 356 4.201812 CGCCAAGGCATGATTATTATACGG 60.202 45.833 12.19 0.00 42.06 4.02
356 357 4.201812 CCGCCAAGGCATGATTATTATACG 60.202 45.833 12.19 0.00 42.06 3.06
357 358 4.096382 CCCGCCAAGGCATGATTATTATAC 59.904 45.833 12.19 0.00 42.06 1.47
358 359 4.269183 CCCGCCAAGGCATGATTATTATA 58.731 43.478 12.19 0.00 42.06 0.98
359 360 3.091545 CCCGCCAAGGCATGATTATTAT 58.908 45.455 12.19 0.00 42.06 1.28
360 361 2.513753 CCCGCCAAGGCATGATTATTA 58.486 47.619 12.19 0.00 42.06 0.98
361 362 1.331214 CCCGCCAAGGCATGATTATT 58.669 50.000 12.19 0.00 42.06 1.40
362 363 0.540365 CCCCGCCAAGGCATGATTAT 60.540 55.000 12.19 0.00 42.06 1.28
363 364 1.152777 CCCCGCCAAGGCATGATTA 60.153 57.895 12.19 0.00 42.06 1.75
364 365 2.442643 CCCCGCCAAGGCATGATT 60.443 61.111 12.19 0.00 42.06 2.57
365 366 3.743017 ACCCCGCCAAGGCATGAT 61.743 61.111 12.19 0.00 42.06 2.45
366 367 4.738998 CACCCCGCCAAGGCATGA 62.739 66.667 12.19 0.00 42.06 3.07
388 389 3.245158 CCCATCCTAATCATGTCTGGCAT 60.245 47.826 0.00 0.00 38.60 4.40
389 390 2.107031 CCCATCCTAATCATGTCTGGCA 59.893 50.000 0.00 0.00 0.00 4.92
390 391 2.787994 CCCATCCTAATCATGTCTGGC 58.212 52.381 0.00 0.00 0.00 4.85
391 392 2.553904 GGCCCATCCTAATCATGTCTGG 60.554 54.545 0.00 0.00 0.00 3.86
392 393 2.787994 GGCCCATCCTAATCATGTCTG 58.212 52.381 0.00 0.00 0.00 3.51
393 394 1.349026 CGGCCCATCCTAATCATGTCT 59.651 52.381 0.00 0.00 0.00 3.41
394 395 1.611673 CCGGCCCATCCTAATCATGTC 60.612 57.143 0.00 0.00 0.00 3.06
395 396 0.401738 CCGGCCCATCCTAATCATGT 59.598 55.000 0.00 0.00 0.00 3.21
396 397 0.322816 CCCGGCCCATCCTAATCATG 60.323 60.000 0.00 0.00 0.00 3.07
397 398 2.078452 CCCGGCCCATCCTAATCAT 58.922 57.895 0.00 0.00 0.00 2.45
398 399 2.829384 GCCCGGCCCATCCTAATCA 61.829 63.158 0.00 0.00 0.00 2.57
399 400 2.034221 GCCCGGCCCATCCTAATC 59.966 66.667 0.00 0.00 0.00 1.75
400 401 3.580319 GGCCCGGCCCATCCTAAT 61.580 66.667 18.83 0.00 44.06 1.73
420 421 0.808755 GTCATAGTTGGCCAAACGGG 59.191 55.000 22.47 10.88 44.04 5.28
421 422 1.821216 AGTCATAGTTGGCCAAACGG 58.179 50.000 22.47 10.49 44.04 4.44
422 423 2.552315 ACAAGTCATAGTTGGCCAAACG 59.448 45.455 22.47 9.05 44.04 3.60
423 424 4.278419 AGAACAAGTCATAGTTGGCCAAAC 59.722 41.667 22.47 14.70 39.24 2.93
424 425 4.469657 AGAACAAGTCATAGTTGGCCAAA 58.530 39.130 22.47 5.91 32.93 3.28
425 426 4.098914 AGAACAAGTCATAGTTGGCCAA 57.901 40.909 16.05 16.05 32.93 4.52
426 427 3.788227 AGAACAAGTCATAGTTGGCCA 57.212 42.857 0.00 0.00 32.93 5.36
427 428 4.833390 ACTAGAACAAGTCATAGTTGGCC 58.167 43.478 0.00 0.00 32.93 5.36
428 429 5.725362 AGACTAGAACAAGTCATAGTTGGC 58.275 41.667 0.00 0.00 46.89 4.52
429 430 8.687242 TGATAGACTAGAACAAGTCATAGTTGG 58.313 37.037 0.00 0.00 46.89 3.77
430 431 9.729023 CTGATAGACTAGAACAAGTCATAGTTG 57.271 37.037 0.00 0.00 46.89 3.16
431 432 8.908903 CCTGATAGACTAGAACAAGTCATAGTT 58.091 37.037 0.00 0.00 46.89 2.24
432 433 8.275758 TCCTGATAGACTAGAACAAGTCATAGT 58.724 37.037 0.00 0.00 46.89 2.12
433 434 8.684386 TCCTGATAGACTAGAACAAGTCATAG 57.316 38.462 0.00 0.21 46.89 2.23
434 435 9.647918 ATTCCTGATAGACTAGAACAAGTCATA 57.352 33.333 0.00 0.00 46.89 2.15
435 436 7.962995 TTCCTGATAGACTAGAACAAGTCAT 57.037 36.000 0.00 0.00 46.89 3.06
436 437 7.631594 GCATTCCTGATAGACTAGAACAAGTCA 60.632 40.741 0.00 0.00 46.89 3.41
437 438 6.699642 GCATTCCTGATAGACTAGAACAAGTC 59.300 42.308 0.00 0.00 45.20 3.01
438 439 6.407525 GGCATTCCTGATAGACTAGAACAAGT 60.408 42.308 0.00 0.00 0.00 3.16
439 440 5.988561 GGCATTCCTGATAGACTAGAACAAG 59.011 44.000 0.00 0.00 0.00 3.16
440 441 5.663106 AGGCATTCCTGATAGACTAGAACAA 59.337 40.000 0.00 0.00 42.34 2.83
441 442 5.211973 AGGCATTCCTGATAGACTAGAACA 58.788 41.667 0.00 0.00 42.34 3.18
442 443 5.799827 AGGCATTCCTGATAGACTAGAAC 57.200 43.478 0.00 0.00 42.34 3.01
443 444 6.839134 TGTTAGGCATTCCTGATAGACTAGAA 59.161 38.462 0.00 0.00 44.08 2.10
444 445 6.373759 TGTTAGGCATTCCTGATAGACTAGA 58.626 40.000 0.00 0.00 44.08 2.43
445 446 6.656632 TGTTAGGCATTCCTGATAGACTAG 57.343 41.667 0.00 0.00 44.08 2.57
446 447 7.432148 TTTGTTAGGCATTCCTGATAGACTA 57.568 36.000 0.00 0.00 44.08 2.59
447 448 5.957771 TTGTTAGGCATTCCTGATAGACT 57.042 39.130 0.00 0.00 44.08 3.24
448 449 7.573968 AATTTGTTAGGCATTCCTGATAGAC 57.426 36.000 0.00 0.00 44.08 2.59
449 450 9.693739 TTTAATTTGTTAGGCATTCCTGATAGA 57.306 29.630 0.00 0.00 44.08 1.98
450 451 9.956720 CTTTAATTTGTTAGGCATTCCTGATAG 57.043 33.333 0.00 0.00 44.08 2.08
451 452 8.912988 CCTTTAATTTGTTAGGCATTCCTGATA 58.087 33.333 0.00 0.00 44.08 2.15
452 453 7.785033 CCTTTAATTTGTTAGGCATTCCTGAT 58.215 34.615 0.00 0.00 44.08 2.90
453 454 7.169158 CCTTTAATTTGTTAGGCATTCCTGA 57.831 36.000 0.00 0.00 44.08 3.86
462 463 8.600449 TTGAAATGTGCCTTTAATTTGTTAGG 57.400 30.769 0.00 0.00 0.00 2.69
465 466 8.734386 TGTTTTGAAATGTGCCTTTAATTTGTT 58.266 25.926 0.00 0.00 0.00 2.83
466 467 8.273780 TGTTTTGAAATGTGCCTTTAATTTGT 57.726 26.923 0.00 0.00 0.00 2.83
467 468 9.733219 AATGTTTTGAAATGTGCCTTTAATTTG 57.267 25.926 0.00 0.00 0.00 2.32
468 469 9.949174 GAATGTTTTGAAATGTGCCTTTAATTT 57.051 25.926 0.00 0.00 0.00 1.82
469 470 8.567104 GGAATGTTTTGAAATGTGCCTTTAATT 58.433 29.630 0.00 0.00 0.00 1.40
470 471 7.718753 TGGAATGTTTTGAAATGTGCCTTTAAT 59.281 29.630 0.00 0.00 0.00 1.40
471 472 7.011857 GTGGAATGTTTTGAAATGTGCCTTTAA 59.988 33.333 0.00 0.00 0.00 1.52
472 473 6.481644 GTGGAATGTTTTGAAATGTGCCTTTA 59.518 34.615 0.00 0.00 0.00 1.85
473 474 5.296531 GTGGAATGTTTTGAAATGTGCCTTT 59.703 36.000 0.00 0.00 0.00 3.11
474 475 4.815846 GTGGAATGTTTTGAAATGTGCCTT 59.184 37.500 0.00 0.00 0.00 4.35
475 476 4.141756 TGTGGAATGTTTTGAAATGTGCCT 60.142 37.500 0.00 0.00 0.00 4.75
476 477 4.125703 TGTGGAATGTTTTGAAATGTGCC 58.874 39.130 0.00 0.00 0.00 5.01
477 478 5.466058 TGATGTGGAATGTTTTGAAATGTGC 59.534 36.000 0.00 0.00 0.00 4.57
478 479 7.661127 ATGATGTGGAATGTTTTGAAATGTG 57.339 32.000 0.00 0.00 0.00 3.21
479 480 8.366401 TGTATGATGTGGAATGTTTTGAAATGT 58.634 29.630 0.00 0.00 0.00 2.71
480 481 8.760103 TGTATGATGTGGAATGTTTTGAAATG 57.240 30.769 0.00 0.00 0.00 2.32
481 482 9.426837 CTTGTATGATGTGGAATGTTTTGAAAT 57.573 29.630 0.00 0.00 0.00 2.17
482 483 7.384660 GCTTGTATGATGTGGAATGTTTTGAAA 59.615 33.333 0.00 0.00 0.00 2.69
483 484 6.867816 GCTTGTATGATGTGGAATGTTTTGAA 59.132 34.615 0.00 0.00 0.00 2.69
484 485 6.209192 AGCTTGTATGATGTGGAATGTTTTGA 59.791 34.615 0.00 0.00 0.00 2.69
485 486 6.392354 AGCTTGTATGATGTGGAATGTTTTG 58.608 36.000 0.00 0.00 0.00 2.44
486 487 6.594788 AGCTTGTATGATGTGGAATGTTTT 57.405 33.333 0.00 0.00 0.00 2.43
487 488 6.095440 GGTAGCTTGTATGATGTGGAATGTTT 59.905 38.462 0.00 0.00 0.00 2.83
488 489 5.590259 GGTAGCTTGTATGATGTGGAATGTT 59.410 40.000 0.00 0.00 0.00 2.71
489 490 5.126067 GGTAGCTTGTATGATGTGGAATGT 58.874 41.667 0.00 0.00 0.00 2.71
490 491 4.212004 CGGTAGCTTGTATGATGTGGAATG 59.788 45.833 0.00 0.00 0.00 2.67
491 492 4.100963 TCGGTAGCTTGTATGATGTGGAAT 59.899 41.667 0.00 0.00 0.00 3.01
492 493 3.449377 TCGGTAGCTTGTATGATGTGGAA 59.551 43.478 0.00 0.00 0.00 3.53
493 494 3.028130 TCGGTAGCTTGTATGATGTGGA 58.972 45.455 0.00 0.00 0.00 4.02
494 495 3.452755 TCGGTAGCTTGTATGATGTGG 57.547 47.619 0.00 0.00 0.00 4.17
495 496 4.180817 TGTTCGGTAGCTTGTATGATGTG 58.819 43.478 0.00 0.00 0.00 3.21
496 497 4.465632 TGTTCGGTAGCTTGTATGATGT 57.534 40.909 0.00 0.00 0.00 3.06
497 498 4.870426 ACTTGTTCGGTAGCTTGTATGATG 59.130 41.667 0.00 0.00 0.00 3.07
498 499 5.086104 ACTTGTTCGGTAGCTTGTATGAT 57.914 39.130 0.00 0.00 0.00 2.45
499 500 4.530710 ACTTGTTCGGTAGCTTGTATGA 57.469 40.909 0.00 0.00 0.00 2.15
500 501 6.715344 TTTACTTGTTCGGTAGCTTGTATG 57.285 37.500 0.00 0.00 0.00 2.39
501 502 7.658575 TCTTTTTACTTGTTCGGTAGCTTGTAT 59.341 33.333 0.00 0.00 0.00 2.29
502 503 6.985645 TCTTTTTACTTGTTCGGTAGCTTGTA 59.014 34.615 0.00 0.00 0.00 2.41
503 504 5.818857 TCTTTTTACTTGTTCGGTAGCTTGT 59.181 36.000 0.00 0.00 0.00 3.16
504 505 6.295039 TCTTTTTACTTGTTCGGTAGCTTG 57.705 37.500 0.00 0.00 0.00 4.01
505 506 6.930667 TTCTTTTTACTTGTTCGGTAGCTT 57.069 33.333 0.00 0.00 0.00 3.74
506 507 6.930667 TTTCTTTTTACTTGTTCGGTAGCT 57.069 33.333 0.00 0.00 0.00 3.32
507 508 7.412063 TCTTTTCTTTTTACTTGTTCGGTAGC 58.588 34.615 0.00 0.00 0.00 3.58
508 509 9.382244 CATCTTTTCTTTTTACTTGTTCGGTAG 57.618 33.333 0.00 0.00 0.00 3.18
509 510 9.111613 TCATCTTTTCTTTTTACTTGTTCGGTA 57.888 29.630 0.00 0.00 0.00 4.02
510 511 7.992008 TCATCTTTTCTTTTTACTTGTTCGGT 58.008 30.769 0.00 0.00 0.00 4.69
511 512 9.463443 AATCATCTTTTCTTTTTACTTGTTCGG 57.537 29.630 0.00 0.00 0.00 4.30
517 518 9.959749 TGCGTTAATCATCTTTTCTTTTTACTT 57.040 25.926 0.00 0.00 0.00 2.24
518 519 9.612620 CTGCGTTAATCATCTTTTCTTTTTACT 57.387 29.630 0.00 0.00 0.00 2.24
519 520 9.394477 ACTGCGTTAATCATCTTTTCTTTTTAC 57.606 29.630 0.00 0.00 0.00 2.01
520 521 9.959749 AACTGCGTTAATCATCTTTTCTTTTTA 57.040 25.926 0.00 0.00 0.00 1.52
521 522 8.871686 AACTGCGTTAATCATCTTTTCTTTTT 57.128 26.923 0.00 0.00 0.00 1.94
522 523 8.871686 AAACTGCGTTAATCATCTTTTCTTTT 57.128 26.923 0.00 0.00 0.00 2.27
523 524 8.134895 TGAAACTGCGTTAATCATCTTTTCTTT 58.865 29.630 0.00 0.00 0.00 2.52
524 525 7.648142 TGAAACTGCGTTAATCATCTTTTCTT 58.352 30.769 0.00 0.00 0.00 2.52
525 526 7.202016 TGAAACTGCGTTAATCATCTTTTCT 57.798 32.000 0.00 0.00 0.00 2.52
526 527 8.452989 AATGAAACTGCGTTAATCATCTTTTC 57.547 30.769 8.19 0.00 27.29 2.29
527 528 7.542130 GGAATGAAACTGCGTTAATCATCTTTT 59.458 33.333 8.19 0.00 27.29 2.27
528 529 7.029563 GGAATGAAACTGCGTTAATCATCTTT 58.970 34.615 8.19 2.37 27.29 2.52
529 530 6.555315 GGAATGAAACTGCGTTAATCATCTT 58.445 36.000 8.19 0.00 27.29 2.40
530 531 5.220662 CGGAATGAAACTGCGTTAATCATCT 60.221 40.000 8.19 2.56 27.29 2.90
531 532 4.963953 CGGAATGAAACTGCGTTAATCATC 59.036 41.667 8.19 0.00 27.29 2.92
532 533 4.201910 CCGGAATGAAACTGCGTTAATCAT 60.202 41.667 0.00 4.06 28.14 2.45
533 534 3.126171 CCGGAATGAAACTGCGTTAATCA 59.874 43.478 0.00 0.00 0.00 2.57
534 535 3.372822 TCCGGAATGAAACTGCGTTAATC 59.627 43.478 0.00 0.00 0.00 1.75
535 536 3.340034 TCCGGAATGAAACTGCGTTAAT 58.660 40.909 0.00 0.00 0.00 1.40
536 537 2.739913 CTCCGGAATGAAACTGCGTTAA 59.260 45.455 5.23 0.00 0.00 2.01
537 538 2.028839 TCTCCGGAATGAAACTGCGTTA 60.029 45.455 5.23 0.00 0.00 3.18
538 539 1.156736 CTCCGGAATGAAACTGCGTT 58.843 50.000 5.23 0.00 0.00 4.84
539 540 0.320374 TCTCCGGAATGAAACTGCGT 59.680 50.000 5.23 0.00 0.00 5.24
540 541 1.002366 CTCTCCGGAATGAAACTGCG 58.998 55.000 5.23 0.00 0.00 5.18
541 542 0.729690 GCTCTCCGGAATGAAACTGC 59.270 55.000 5.23 0.00 0.00 4.40
542 543 2.393271 AGCTCTCCGGAATGAAACTG 57.607 50.000 5.23 0.00 0.00 3.16
543 544 4.020128 ACTTAAGCTCTCCGGAATGAAACT 60.020 41.667 5.23 0.00 0.00 2.66
544 545 4.254492 ACTTAAGCTCTCCGGAATGAAAC 58.746 43.478 5.23 0.00 0.00 2.78
545 546 4.553330 ACTTAAGCTCTCCGGAATGAAA 57.447 40.909 5.23 0.00 0.00 2.69
546 547 4.553330 AACTTAAGCTCTCCGGAATGAA 57.447 40.909 5.23 0.00 0.00 2.57
547 548 4.253685 CAAACTTAAGCTCTCCGGAATGA 58.746 43.478 5.23 0.00 0.00 2.57
548 549 3.375299 CCAAACTTAAGCTCTCCGGAATG 59.625 47.826 5.23 1.79 0.00 2.67
549 550 3.610911 CCAAACTTAAGCTCTCCGGAAT 58.389 45.455 5.23 0.00 0.00 3.01
550 551 2.290071 CCCAAACTTAAGCTCTCCGGAA 60.290 50.000 5.23 0.00 0.00 4.30
551 552 1.278127 CCCAAACTTAAGCTCTCCGGA 59.722 52.381 2.93 2.93 0.00 5.14
552 553 1.003233 ACCCAAACTTAAGCTCTCCGG 59.997 52.381 1.29 0.00 0.00 5.14
553 554 2.076863 CACCCAAACTTAAGCTCTCCG 58.923 52.381 1.29 0.00 0.00 4.63
554 555 3.141767 ACACCCAAACTTAAGCTCTCC 57.858 47.619 1.29 0.00 0.00 3.71
555 556 4.134563 TCAACACCCAAACTTAAGCTCTC 58.865 43.478 1.29 0.00 0.00 3.20
556 557 4.164843 TCAACACCCAAACTTAAGCTCT 57.835 40.909 1.29 0.00 0.00 4.09
557 558 5.705905 AGTATCAACACCCAAACTTAAGCTC 59.294 40.000 1.29 0.00 0.00 4.09
580 581 6.906678 TGCGTACAATATAAGTACACGTACAG 59.093 38.462 9.85 0.00 41.40 2.74
587 588 4.923893 AGCGTGCGTACAATATAAGTACA 58.076 39.130 14.94 0.00 41.40 2.90
594 595 1.197055 CGTGAGCGTGCGTACAATAT 58.803 50.000 4.09 0.00 0.00 1.28
610 611 9.615067 AAAAATGTTTTTGTGACACCAAGCGTG 62.615 37.037 2.45 0.00 42.18 5.34
611 612 1.542030 TGTTTTTGTGACACCAAGCGT 59.458 42.857 2.45 0.00 0.00 5.07
612 613 2.270275 TGTTTTTGTGACACCAAGCG 57.730 45.000 2.45 0.00 0.00 4.68
613 614 5.544136 AAAATGTTTTTGTGACACCAAGC 57.456 34.783 2.45 0.00 0.00 4.01
614 615 9.884465 TTTTAAAAATGTTTTTGTGACACCAAG 57.116 25.926 12.41 0.00 40.33 3.61
616 617 9.884465 CTTTTTAAAAATGTTTTTGTGACACCA 57.116 25.926 13.55 0.00 40.33 4.17
617 618 9.885934 ACTTTTTAAAAATGTTTTTGTGACACC 57.114 25.926 13.55 0.00 40.33 4.16
633 634 8.744008 TTGTCGTGATTGTGAACTTTTTAAAA 57.256 26.923 0.00 0.00 0.00 1.52
636 637 8.918961 AAATTGTCGTGATTGTGAACTTTTTA 57.081 26.923 0.00 0.00 0.00 1.52
674 678 7.032580 TCGAATTCAAACACTGTTGTGATTTT 58.967 30.769 6.22 0.76 46.55 1.82
704 709 1.516161 GGGTTACGCGTTTTCTCCTT 58.484 50.000 20.78 0.00 0.00 3.36
717 722 2.436115 GCAGCTCGTGGGGGTTAC 60.436 66.667 0.00 0.00 0.00 2.50
718 723 3.712907 GGCAGCTCGTGGGGGTTA 61.713 66.667 0.00 0.00 0.00 2.85
762 767 4.717629 TTCGTCAGGTCAGGCGCG 62.718 66.667 0.00 0.00 0.00 6.86
771 776 0.168128 GGGTCGCAAATTTCGTCAGG 59.832 55.000 8.98 0.00 0.00 3.86
863 870 1.788258 CGGATTGATCGGATGGTCAG 58.212 55.000 0.00 0.00 0.00 3.51
869 876 0.603065 TCGATGCGGATTGATCGGAT 59.397 50.000 2.17 0.00 41.46 4.18
1074 1113 2.032681 ACCTTCCTGTGGCGCTTC 59.967 61.111 7.64 0.79 0.00 3.86
1379 1426 0.615331 ACACATCGGAATCTGCAGGT 59.385 50.000 15.13 2.68 0.00 4.00
1587 1644 2.272678 TCTCGCACGAACTTTCACAAA 58.727 42.857 0.00 0.00 0.00 2.83
1603 1660 2.542618 CGACATCCTCAGACCAATCTCG 60.543 54.545 0.00 0.00 30.42 4.04
1611 1668 2.606725 CTGAAATGCGACATCCTCAGAC 59.393 50.000 17.43 0.00 33.65 3.51
1615 1672 3.461061 TCATCTGAAATGCGACATCCTC 58.539 45.455 0.00 0.00 0.00 3.71
1617 1674 3.374988 TGTTCATCTGAAATGCGACATCC 59.625 43.478 0.00 0.00 35.58 3.51
1647 1706 1.512926 ACGATATCCTGATTTGCGCC 58.487 50.000 4.18 0.00 0.00 6.53
1658 1717 6.522054 TCCTGGATTTAACTGAACGATATCC 58.478 40.000 0.00 0.00 0.00 2.59
1672 1731 3.269381 AGGAAATGGTGCTCCTGGATTTA 59.731 43.478 6.34 0.00 40.70 1.40
1673 1732 2.043526 AGGAAATGGTGCTCCTGGATTT 59.956 45.455 6.34 4.01 40.70 2.17
1680 1739 2.725221 ATCAGAGGAAATGGTGCTCC 57.275 50.000 0.00 0.00 45.58 4.70
1681 1740 6.705863 AATAAATCAGAGGAAATGGTGCTC 57.294 37.500 0.00 0.00 44.81 4.26
1686 1745 5.751990 GCTGCAAATAAATCAGAGGAAATGG 59.248 40.000 0.00 0.00 0.00 3.16
1727 1787 6.472686 AAAGGATCGTTCTACTGATAAGCT 57.527 37.500 0.30 0.00 0.00 3.74
1770 1831 2.833794 TGTTGTGTCACTCCTAAGCAC 58.166 47.619 4.27 0.00 0.00 4.40
1813 1880 1.623973 GCCGTAAAGCACACGAGGTC 61.624 60.000 6.36 0.00 41.91 3.85
1814 1881 1.666872 GCCGTAAAGCACACGAGGT 60.667 57.895 6.36 0.00 41.91 3.85
1818 1885 1.060553 CATACTGCCGTAAAGCACACG 59.939 52.381 0.00 0.00 38.00 4.49
1819 1886 1.202031 GCATACTGCCGTAAAGCACAC 60.202 52.381 9.97 0.00 38.00 3.82
1820 1887 1.083489 GCATACTGCCGTAAAGCACA 58.917 50.000 9.97 0.00 38.00 4.57
1829 1896 2.820059 TGGATCTAAGCATACTGCCG 57.180 50.000 0.00 0.00 46.52 5.69
1832 1899 9.416794 CTGTTACTATTGGATCTAAGCATACTG 57.583 37.037 0.00 0.00 0.00 2.74
1917 1985 7.224753 ACAAATCATAAGTAGGTCGCTACAATG 59.775 37.037 0.00 0.00 32.56 2.82
1922 1990 6.459670 TCACAAATCATAAGTAGGTCGCTA 57.540 37.500 0.00 0.00 0.00 4.26
1977 2045 5.067023 CCTTGAGCCAAAAGATCAGTAATCC 59.933 44.000 0.00 0.00 43.01 3.01
2016 2084 4.724399 TGAGCTGTTCTGGAAATTGGTAA 58.276 39.130 0.00 0.00 0.00 2.85
2018 2086 3.228188 TGAGCTGTTCTGGAAATTGGT 57.772 42.857 0.00 0.00 0.00 3.67
2080 2148 9.740239 GATGAATTTGCAATCTGTATTATGTGT 57.260 29.630 0.00 0.00 0.00 3.72
2101 2169 4.271696 ACTGTTCTGACGGAATGATGAA 57.728 40.909 0.00 0.00 36.24 2.57
2187 2258 9.337396 TCAATTATTCAGTTTCATAATAGGCGT 57.663 29.630 0.00 0.00 0.00 5.68
2197 2268 6.704050 TCAGTCGTGTCAATTATTCAGTTTCA 59.296 34.615 0.00 0.00 0.00 2.69
2198 2269 7.117241 TCAGTCGTGTCAATTATTCAGTTTC 57.883 36.000 0.00 0.00 0.00 2.78
2199 2270 7.011950 TGTTCAGTCGTGTCAATTATTCAGTTT 59.988 33.333 0.00 0.00 0.00 2.66
2200 2271 6.481976 TGTTCAGTCGTGTCAATTATTCAGTT 59.518 34.615 0.00 0.00 0.00 3.16
2201 2272 5.989168 TGTTCAGTCGTGTCAATTATTCAGT 59.011 36.000 0.00 0.00 0.00 3.41
2202 2273 6.366061 TCTGTTCAGTCGTGTCAATTATTCAG 59.634 38.462 0.00 0.00 0.00 3.02
2203 2274 6.220201 TCTGTTCAGTCGTGTCAATTATTCA 58.780 36.000 0.00 0.00 0.00 2.57
2204 2275 6.706055 TCTGTTCAGTCGTGTCAATTATTC 57.294 37.500 0.00 0.00 0.00 1.75
2205 2276 7.352739 GTTTCTGTTCAGTCGTGTCAATTATT 58.647 34.615 0.00 0.00 0.00 1.40
2206 2277 6.346598 CGTTTCTGTTCAGTCGTGTCAATTAT 60.347 38.462 0.00 0.00 0.00 1.28
2207 2278 5.051307 CGTTTCTGTTCAGTCGTGTCAATTA 60.051 40.000 0.00 0.00 0.00 1.40
2208 2279 4.260212 CGTTTCTGTTCAGTCGTGTCAATT 60.260 41.667 0.00 0.00 0.00 2.32
2209 2280 3.245284 CGTTTCTGTTCAGTCGTGTCAAT 59.755 43.478 0.00 0.00 0.00 2.57
2210 2281 2.601314 CGTTTCTGTTCAGTCGTGTCAA 59.399 45.455 0.00 0.00 0.00 3.18
2251 2322 4.617253 TTGGCGTATGCTTGTATCCTAT 57.383 40.909 6.92 0.00 42.25 2.57
2267 2338 4.264380 GTCTTTTTGTTGTGTACTTTGGCG 59.736 41.667 0.00 0.00 0.00 5.69
2271 2342 6.584185 ACAGGTCTTTTTGTTGTGTACTTT 57.416 33.333 0.00 0.00 0.00 2.66
2315 2386 8.701895 AGTATAAAGTCGGGTCATCTATTTTGA 58.298 33.333 0.00 0.00 0.00 2.69
2323 2394 9.106070 ACAAATTTAGTATAAAGTCGGGTCATC 57.894 33.333 0.00 0.00 0.00 2.92
2325 2396 9.369904 GTACAAATTTAGTATAAAGTCGGGTCA 57.630 33.333 0.00 0.00 0.00 4.02
2359 2430 9.003658 CCAAAATAGATGACTCAAGTTTGTACT 57.996 33.333 0.00 0.00 35.68 2.73
2361 2432 9.567776 TTCCAAAATAGATGACTCAAGTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2362 2433 8.352942 GTTCCAAAATAGATGACTCAAGTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2363 2434 7.535258 CGTTCCAAAATAGATGACTCAAGTTTG 59.465 37.037 0.00 0.00 0.00 2.93
2365 2436 6.149474 CCGTTCCAAAATAGATGACTCAAGTT 59.851 38.462 0.00 0.00 0.00 2.66
2366 2437 5.643777 CCGTTCCAAAATAGATGACTCAAGT 59.356 40.000 0.00 0.00 0.00 3.16
2367 2438 5.874810 TCCGTTCCAAAATAGATGACTCAAG 59.125 40.000 0.00 0.00 0.00 3.02
2368 2439 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2369 2440 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2370 2441 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2371 2442 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2372 2443 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2373 2444 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2374 2445 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2375 2446 3.433740 GCTCCCTCCGTTCCAAAATAGAT 60.434 47.826 0.00 0.00 0.00 1.98
2376 2447 2.093128 GCTCCCTCCGTTCCAAAATAGA 60.093 50.000 0.00 0.00 0.00 1.98
2377 2448 2.289565 GCTCCCTCCGTTCCAAAATAG 58.710 52.381 0.00 0.00 0.00 1.73
2378 2449 1.631388 TGCTCCCTCCGTTCCAAAATA 59.369 47.619 0.00 0.00 0.00 1.40
2379 2450 0.404040 TGCTCCCTCCGTTCCAAAAT 59.596 50.000 0.00 0.00 0.00 1.82
2380 2451 0.404040 ATGCTCCCTCCGTTCCAAAA 59.596 50.000 0.00 0.00 0.00 2.44
2381 2452 0.322456 CATGCTCCCTCCGTTCCAAA 60.322 55.000 0.00 0.00 0.00 3.28
2383 2454 1.918293 ACATGCTCCCTCCGTTCCA 60.918 57.895 0.00 0.00 0.00 3.53
2397 2468 0.320334 TCTGCACCGGTGTACACATG 60.320 55.000 33.92 20.56 0.00 3.21
2410 2483 5.409520 GGGATTTTCCATTTCTTTTCTGCAC 59.590 40.000 0.00 0.00 38.64 4.57
2413 2486 8.127150 ACTAGGGATTTTCCATTTCTTTTCTG 57.873 34.615 0.00 0.00 38.64 3.02
2414 2487 9.997172 ATACTAGGGATTTTCCATTTCTTTTCT 57.003 29.630 0.00 0.00 38.64 2.52
2433 2506 3.324846 TGCTGCCCATACTTGATACTAGG 59.675 47.826 0.00 0.00 0.00 3.02
2456 2529 5.537300 TCTCTATGTTACTTCAGCCATCC 57.463 43.478 0.00 0.00 0.00 3.51
2472 2545 9.474313 GGAGGAACTTGTCATATCTATCTCTAT 57.526 37.037 0.00 0.00 41.55 1.98
2483 2556 3.561313 GCTTTGGGGAGGAACTTGTCATA 60.561 47.826 0.00 0.00 41.55 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.