>input_sequence_77507
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCAGCTCCA
AGAGGATCG-------TCGGCGACCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCGAAGCGCC
ACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGCGCCTGGCGAGGAGGGGCGGCGTGAAG
CGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCACGCCGGAAGACCGTCACCGCCATGGACGTCGTGTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGCCG--------CTGGCCCCCGCCAGACGGTCGTCAGTCTTCGTCGCCACCTGCAGATTCCGA
TGTGTTAGTCCGCCCGTTCCTAGTAGTGTTGCGCTCAAGAAATCTCAGATGGAAACCGCCTTGTTTCCCCATTTCCTCTG
TATGTTTAGCTGAATCATGGAATTA-----TGTAATGAAGATGTTTGCATCCA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1D_1_TraesCS1D01G286700
GGCCAAATGGGACGTGCCAACCAGGCCGGTCCGCGAGCACGCCCGGCACGGCCCGCCATGGGCCATGCATGGCACGCGCT
AAACGGGTCGGGCCCGGCATGCGGCATGCCCTAGGCCGTGCTTGGGCTGCTAGGCTGAGCACGCGGGCCGGCACGGCACA
ACCCGATTATCTTATTATTTTTTACTTTTTATGTACTCTCTATATGGCCCAACAGGTAAAAATAGGCTAAAAAACGCCCT
AGTGCGCCAAATAGCAGGCATACTAGTGGGCCTGGCCTGCCGGTGGGCCGTCCTGATTAGCAGCTTGGCTGTGCCTGGGC
TACAAGCTGCAGCATGCGAGCCGGCATGACACGACCCGTATAATAATCATGCCTTGGCGGGGTGGGCCATGCCAGACATG
ATTAGGATGGGCCGGGCCGGCCCGTTTGGCCAACTATGACTTGTTCTAGTCTATCAGGAATGCCTAACAAATTAAAGGCA
CATTTCAAAACATTCCACATCATACAAGCTACCGAACAAGTAAAAAGAAAAGATGATTAACGCAGTTTCATTCCGGAGAG
CTTAAGTTTGGGTGTTGATACTGTACGTGTACTTATATTGTACGCACGCTCACGCTTGGTGTCACAAAAACATTTTT--A
AAAAGTTCACAATCACGACAATTTTTTTTTTTTG-AAAAAATCACAACAGTGTTTGAATTCG-AAAAAAAGGAGAAAACG
CGTAACCCCCACGAGCTGCCGCCCAACAGCCCAAATATTTGGAGCTCGCGCCTGACCTGACGAAATTTGCGACCCACCGC
GCCACT-CACCGATCGGCACCGCCCGCCAGGTCATCGATCCGCGGCAACTCTCCCTC-GGATCGCCGTCCTGACCATCCG
ATCAATCCGCATCGAACGGCAGGCACATGCCTCCTCCCA----------CCCCTCGCCTCCTTTAAAATCCCCTTCCCCC
CTTCTCGCAAATCACAGCA---ACCCA----TCACCACCCCTCCCCCC---AATCCCACTCGCG-----CAGCAGCTCCA
AGAGGATCG-------TCGGCGACCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCGAAGCGCC
ACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGCGCCTGGCGAGGAGGGGCGGCGTGAAG
CGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCACGCCGGAAGACCGTCACCGCCATGGACGTCGTGTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGCCG--------CTGGCCCCCGCCAGACGGTCGTCAGTCTTCGTCGCCACCTGCAGATTCCGA
TGTGTTAGTCCGCCCGTTCCTAGTAGTGTTGCGCTCAAGAAATCTCAGATGGAAACCGCCTTGTTTCCCCATTTCCTCTG
TATGTTTAGCTGAATCATGGAATTA-----TGTAATGAAGATGTTTGCATCCAGAGTTCGAACTGAAACCTGCATCCCTT
GTCTTGAATTCTGTGCAAATGCTGCGTTCC-----TCTCCTTTTTTGTGAAAGTTCGTGCGAGATTGGTCTGAGGA--TG
TCGCATTTCAGATGAACAAATTGGCGGCGCAAATCAGGATATCGTTCAGTTAAATCCAGGAGCACCATTTCCTCTG-ATT
TATTTGCAGCACTCTGTTCCGTAACCAGCTTATCAGTAGAACGATCC-TTTTAGTTTTGCTAATTTTACAGTGCTTA---
GGAGTGACACA---ACATCTCGAATCATGGGAACATGAGGACCTCGTGTGCTTTACGGCAGTAT-GCTTAGATCCAATAG
TAACAGTAGGTGTCATGTCACTGTACGAATGCTTCTTTCACGACATTTCAGATAAAAAGGGGCGCATTGTAGCGACCTAC
TTATGATTTGTGAATCATATAATCCTAAAAACAAATAATCTTGAGGATTACTGATCTTTTGGCTCAAGGGTCCTGTGAAT
TGTTTACCAATTTCCAGAACAGCTCAAATAACAACTCGAATAAAGGAATAATAATATTCTCTTGAGAACACATAATACAG
ATTGCAAATTCATCATTCCGTCAGAACAGTAATGGGCTTTGAAAAACAATTTACGTAAGGAAGTCTGCTCCT--TACTGG
CATGTA-AACTTCAGGAACGCCTATTATGAAACTGAATAATTGACACGACTGAACAGAAACGTGGTGCAAACAGTCTGAA
GATAGGATACAAGCATACGCCAAAGTACACAACAAAAAGACCTGTTAAAAACTACTCCCTCCGTTTCAAAATAGATGACC
CGACTTTATACTAAATTTGTACTAAAGTTAGTACAAACTTGAGTCATCTATTTTGGAACGGAGGGAGCAT--GTGTACAC
CGGTGCAGAAAAGAAATGGAAAATCCCTAGTATCAAGTATGGGCAGCAGGATGGCTGAAGTAACATAGAGATAGATATGA
CAAGTTCCTCCCCAAAGCTTCTGGAAGTATGAAG
>chr1A_559
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
CTTAAGTTTGGGTGCTGTTATTGTACGAGTACTTGTATTGTAGGCACGCTGTGCTCC-GTGTCGCAAAAACATATTAAGA
AAAGGATCGCAATCACAACAAAAATCATATTAAATAATAAATCGCAACAATGTTTGAATTCGCAAAAATAGGAGAAAACG
CACAACCCCAACGACCAGTCGCCCAACAGCCCCAAAATTTGGAGCTGGCGCCTGATCTGACGAAATTTGCGACCCACCAC
GCCACA-CACCGATCGGCACCGCCTGCCAGGTCATCGATCCGCGGCAACTCTCCCCT-GGATCGCCGTCTTGACCGTCCG
ATCCATCCGAATCGAACGGCAGGCACATGCCTCCTCCCA----------CCCCTCGCCTTCTTTAAAATCCCCTTCCCCC
-TTCTCGCAAATCACAGC----ACCCA----TCACCACTCCT-CCCCC---AATCCAACTCGCG-----CAGCAGCTCCA
AGAGGATCG-------TCAGCGACCATGTCCGGGCGCGGCAAGGGCGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGAGGCTCGCTCGGAGGGGCGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGCCG--------CTGGCCCCCGCCAGATGGTCGTCAGTCTTCGTCGCCGCCTGCAGATTCCGA
TGTGTTAGTCCGCCCGTTCCTAGTAGTGTTGCGCTCAAGAAATCTCAGATGGAAACCGCCTTGTTTCCCCATTTCCTCTG
TATGGTTAACTGAATCATGAAATTA-----TGTAATGAAGATGTTGGCATCC---GTTCGAACTGAAACCTGCATCCCTT
GTCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1B_702
AAAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGAAAAAACG
CACAACCCCCACGAGCAGCCGCCCAACAGCCG--AAATATGTAGCTGGCGCCTGATCTGACGAAATTTGCGATACACCCC
GCCACT-CACCGATCGGCACCGCCCGCCAGGTCATCGATCCGCGGCAACTCTCCCTC-GGATCGCCGTATCGACCGTCCG
ATCCATCCGCATCGAACGGCAGGCACATGCCTCCTCCGGTCCTCCCACCCCTCTCGCCTCCTTTAAAATCCCCTTCCCCC
GTTCTCGCAAATCACAGC----ACCCA----TCACCACCGCT-CCCT---CAATCCCACTCGCG-----CAGCAGCTCC-
---------AAGAGGATCGTCAGCCATGTCTGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTTCTTCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGCGCCTGGCGAGGAGGGGCGGCGTGAAG
CGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGTGACGCCGTCAC
CTACACGGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGCCG--------C--------GCCAGATGGTCGTCAGTCCTCGTCGCCGCCTGCAGATTCCGC
TGTGTTAGTCCGCCCGTTCCTAGTAGTGTTGCGCTCAAGAAATCTCAGATGGAAACCGCCTTGTTTCCC-ATTTCCTCTG
TCTGTTTAGCTGGATCATGAAATTATGTACTGTAATGAAGATGTTTGCATCCAGAGTTCGAACTGAAACCCGCATCCCTT
GTCGTGAATTATGTGCAAATGCTGTGTTCCCCTCTTCTATTTTCTTGTGAAAGTTCGTGTGAGATTGATCTCACGATGTG
TCGCATTTCAGATGAACAAATTGGCAGCGCAAATCATGATATCGTTCAGTACAATCCAATAGCAGCATTTCCTCTGGATT
TATTTGCAGCACTCTGTTCCGTAACCTGCTTATCAGTAGAATGATCCTTTTTAGTTTTGCTAATTTTACAATGCTTATTA
GGAGTGACACAATGACATCTCGAATCATGGGAACATGAGCGCCTG--GTGCTTTAGGGAAGTATAGCTTAGATCCAATAG
TAACAGTAGGTGTCATGTCACTGTACGAATGCTTCTTTCACGACATTTCAGATAAAAAGGGGCGAATTGGAGCGACCTAC
TTATGATTTGTGAATCATCTAATCCTAAAAAAAAATAATCTTGACGATTACTGATCTTTTGGCTCAAGGGTCCTGTGAAT
TGTGTGCCAATTTCCAGAACAGCTCAAATAACAACTCGAATAAAGGAATAATTATATTCTCTTGAGAGCACATAATACAG
ATTGCAAAATCATCATTCCGTCAGAACAGTAATGGGCTTTGAAAAACAATTTACGTAAGGAAGTCTGCTCCTTTTACTGG
CATGTACAACTTCAGGAGCGCCTATTA--------------TGACACGACTGAACAGAAACGTGGTGCAAACAGTCTGAA
GGTAGGATACAAGCATATGCCGAAGTACACAACAAAAAGACCTGTTAAAAACTACTCCCTCCGTTCCGATTTACTCGTCG
TGGTTTTAGTTCAAAATGAACTAAAACCATGACAAGTAAA------------TCGGAACGGAGGGAGTATACGTGTACAC
CGATGAGGAAAAGAAATGGAAAATCACTAGTATCAAGTATGGGCAGCAAGATGACTGAAGTAACGTAGAGATAGAGATGA
CAAGTTCCTCCCCAAAGCTTC-------------
>chr1B_780
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AATTTCAGACGCGCCCC
GCCACTCCAGGAATCGGCGCCTCCCGCCAGATCATCGATCCGCGGCACCTCTCCCCC-GGATCCCCATCTTGACCGTCCA
CTGTATCCGCATCGAACGGCAGGAACACGCCTCCTCCCA----------CCTCTCGTCCCCGTTAAAATCCCCA--CCCC
CTTCCTGCAAATCACCAC----AGCAA----TCACCACCGCT-CCTCCACCTC-----CATCCACTC----GCAGCTCGA
ACCAAGGCTAGT----TCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGGC
ACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGCCTCGCCAGGCGGGGCGGCGTGAAG
CGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTTCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGACGCACCCTCT
ACGGCTTCGGCGGCTAGGCTCGT-----CCTCGCCCCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1A_787
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GACGCGCCCC
GCCACTCCAGCAATCGGTGCCTCCCGCCAGGTCATCAATCCGCGGCATCTCTCCCCC-GGATCGCGATCTCAACCGTACA
CTCCATCCACATCGAACGGCAGGAAAACGCCTCCTCCCA----------CCTCTCGCCCCCCTTAAAATCCCCTTCCCCC
-TCCCGGCAAATCGCACA----A--AA----CAACCACCACC-GCTCCTCCAATCCCACATTCGCTC----GCAGCTCGA
ACCAAGGAGA----GACCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGAGGCTCGCTCGGAGGGGCGGCGTCAAG
CGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTGAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCATGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr6B_787
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GACCCAGCCC
GCCACTCCAGCGACCGGCGCCTCGCGCCAGGTCATCGATCCGCGGCGTCTTTCCCCCCGGATCGCAATCTCAACCGTGCA
TTCCATCTGCATCGAACGGCAGCAACACGCCTCCTCCCA----------CCTCTCGCCCACCTTAAAATCCCCTCCCCAC
-CTC-CGCAAATCGCACA----ACCAA----CCACCACTGCT-CCTCCTCCAATCCCACATTCGGTC----GCAGCTCGA
ACCAAGGAG----GGATCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGGC
ACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGCCTGGCGAGGAGGGGCGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCCCGACGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1A_815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCTCCCGCCACGTCAGCGATCCGCGGCATCTCTCTCGC-GGATCCCCATCTCGACCGTCCA
CCGCATCCGCATCGAACGGCAGGCACACGCCTCCTCCAA----------CCTCTC-TCCCCTTTAAAACGCCCCTCGCCC
CTCCCCGCAAATCACAACACAAACCAC----CAACCACCACC-GCTACTCCAACCCCACATTCGCTTGCCAGCAGCTCGA
AGAGGATCG-------TCGGCGACCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGAGGCTCGCTCGGAGGGGTGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAAACCCGCGGCGTGCTGAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGCGCT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1B_819
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCGCCACGTCAGCGATCCGCGGCATCGCTCTCGC-GGATCCCCATCTCGACCGTCCA
CCGCATCCGCATCGAACGGCAGGCAGACGCCTCCTCCAA----------CCCCTC-TCCCCTTTAAAGCACCCCTCGCCC
CTGCCCGCAAATCACAACACCAACCAC----CAACCACCACC-GCTCCTCCAATCCCACATTCGCTCATCAGCAGCTCGA
AGCGGATCG-------TCGGCGACCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGAGGCTCGCTCGGAGGGGCGGCGTGAAG
CGCATCTCGGGCCTCATCTATGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCTCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1D_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCCACGTCACTGATCCGCGGCGTCCCTCCCCC-GGATCGCCATCTCGACCGTCCA
CTCCATCCGCATCGAACGGCAGGCACACGCCTCCGCCAA----------CCTCTCGCCCCCTTTAAAACGCCCCTCGCCC
CTCCCCGCAAATCACAGC----ACCAG----CAGCCACCACC-GTTCCCCCGATTCCACATCCGCTC----GCAGCTCG-
---------A----GATCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCGGCGGGGCGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAGCACGCCCGCCGCAAGACCGTCACGGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAGGGCCGT-----CC------------GACGGTCGTCGGTCTTTGTCGCCGCCTGCAGATTCC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1B_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCCACGTCACCGATCCGCGGCATCGCTCCCGC-GGATCGCCATCTAGACTGTCCA
CTCCATCCGCATCCAACGGCAGGCACACGCCTCCTCCAA----------CCTCTCGTCCCCTTTAAAACGCCCTTCGCCC
CTGTCCGCAAATCACAGC----ACCAG----CAGTCACCACT-GTTCCTCCGATTCCACATCTGCTC----GCAGCTCG-
---------AAGAGGATCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTCCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCGGAGGGGCGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCAC
CTACACCGAACACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGATTCGGCGGCTAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr3A_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCCACGTCACCGATCCGCGGCATCTCTCCCCC-GGATCGCCGTCTCGACCGTCCA
CTCCATCCGCATCCAACGGCAGCCACACGCCTCCTCCAA----------CCTCTCGACCCCTTTAAGACGCCCTTCGCCC
CACCCAGCAAATCACAGC----ACCAGACGCCACCCACCACC-GTTCCTCCCATCCCACACTCGCTC----GCAGCTCG-
---------A----GATCGTCGGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGCCTAGGCAAGGGCGGCGCCAAGCGCC
ACCGGAAGGTCCTCCGCGATAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCGGCGGGGCGGCGTGAAG
CGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCATCCGCGATGCCGTCAC
CTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCT
ACGGCTTCGGCGGCTAAGGGCCGGCCGGCC------------GACGGGAGTCACTCTTTGTCGCCGCCTGCAGATTCC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--------------S--S--S------S------S-------S-------SSSSSSSS-----S---------S--S---
---S-S--S-------S----SSS-SS-S--SSS---S-----S-----S------------------S-----------
-SS-------------S---------------S--S----------S--------S----------------------S-
---------------------------------------------------------------------S-----S----
---S----------------------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----S--------------------------S-------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------S-------------S-------------SS---S---------------S-------S---S-S------
-------------------------S----------S-------------SS------SS----S---------------
--------------------------S--------------S----------------------------S---------
---------------------------------------SS---SSS--------S--S---------------------
----------------------------------------------------------------S----S----------
------------------S------------S------------S-----------------------------------
---S-S----------------------------------------------S--------------S------------
--------S-----------------------------------------------------------------------
-----------------S---------SSSSSSSSSSSSSS---------------------------------------
-S---------------S---S-------------------------------------------S-S-SS--SSS-S-S
S-SS----SSSS---S-SSSSSS---SSSS-SSS-SSSSSSSSSSSSSSSSS-S-------------S------------
--S--SS------------------S----------------------S----S----------S----------S----
---------------------SSSSSSSSSSSSS
>forward_416
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CATG
ATTAGGATGGGCCGGG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CATGTGTACACCG
GTGCAGA-------------------------------------------------------------------------
----------------------------------
