Multiple sequence alignment - TraesCS1D01G270300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G270300 chr1D 100.000 2487 0 0 1 2487 365297086 365299572 0.000000e+00 4593.0
1 TraesCS1D01G270300 chr1D 86.349 945 63 35 823 1738 365244884 365245791 0.000000e+00 970.0
2 TraesCS1D01G270300 chr1B 90.497 1126 53 24 692 1806 488749680 488750762 0.000000e+00 1437.0
3 TraesCS1D01G270300 chr1B 81.974 932 78 46 823 1700 488658768 488659663 0.000000e+00 708.0
4 TraesCS1D01G270300 chr1B 84.694 196 6 2 442 613 488745609 488745804 9.140000e-40 174.0
5 TraesCS1D01G270300 chr1B 100.000 82 0 0 613 694 488749567 488749648 4.280000e-33 152.0
6 TraesCS1D01G270300 chr1A 88.651 934 55 25 862 1775 464121643 464122545 0.000000e+00 1090.0
7 TraesCS1D01G270300 chr1A 82.784 970 81 40 823 1753 464115537 464116459 0.000000e+00 787.0
8 TraesCS1D01G270300 chr1A 91.626 203 15 2 245 445 543056777 543056575 1.880000e-71 279.0
9 TraesCS1D01G270300 chr1A 83.401 247 20 6 579 804 464121389 464121635 2.510000e-50 209.0
10 TraesCS1D01G270300 chr1A 95.349 43 2 0 537 579 464121313 464121355 4.440000e-08 69.4
11 TraesCS1D01G270300 chrUn 86.908 359 41 6 2132 2487 277307409 277307054 4.980000e-107 398.0
12 TraesCS1D01G270300 chr3A 86.740 362 42 6 2129 2487 727187287 727187645 4.980000e-107 398.0
13 TraesCS1D01G270300 chr3A 86.957 345 39 6 2119 2462 575316269 575315930 1.400000e-102 383.0
14 TraesCS1D01G270300 chr5B 86.872 358 40 7 2134 2486 665997038 665997393 6.450000e-106 394.0
15 TraesCS1D01G270300 chr4D 87.006 354 41 4 2132 2482 378497251 378496900 6.450000e-106 394.0
16 TraesCS1D01G270300 chr7D 86.630 359 41 6 2132 2486 69644694 69644339 8.340000e-105 390.0
17 TraesCS1D01G270300 chr7D 85.994 357 42 7 2132 2482 565217824 565217470 2.340000e-100 375.0
18 TraesCS1D01G270300 chr7D 85.674 356 45 6 2130 2482 138413324 138412972 1.090000e-98 370.0
19 TraesCS1D01G270300 chr7D 94.472 199 11 0 245 443 592230370 592230172 8.640000e-80 307.0
20 TraesCS1D01G270300 chr3D 86.364 352 46 2 2132 2482 383592040 383591690 1.400000e-102 383.0
21 TraesCS1D01G270300 chr4A 94.048 252 5 2 1 242 583726081 583725830 8.400000e-100 374.0
22 TraesCS1D01G270300 chr4A 95.000 200 8 2 245 443 583724995 583724797 1.860000e-81 313.0
23 TraesCS1D01G270300 chr2A 93.651 252 6 2 1 242 751946728 751946477 3.910000e-98 368.0
24 TraesCS1D01G270300 chr2A 96.020 201 6 1 245 443 751945641 751945441 2.390000e-85 326.0
25 TraesCS1D01G270300 chr2A 94.975 199 8 2 245 442 691538131 691538328 6.680000e-81 311.0
26 TraesCS1D01G270300 chr6A 92.857 252 8 2 1 242 573401985 573401734 8.460000e-95 357.0
27 TraesCS1D01G270300 chr6A 92.032 251 10 2 1 241 32254326 32254076 6.590000e-91 344.0
28 TraesCS1D01G270300 chr6A 95.500 200 8 1 245 443 573400903 573400704 3.990000e-83 318.0
29 TraesCS1D01G270300 chr6A 93.035 201 9 2 248 443 124264160 124264360 3.130000e-74 289.0
30 TraesCS1D01G270300 chr3B 90.000 250 15 2 1 240 578287860 578287611 5.160000e-82 315.0
31 TraesCS1D01G270300 chr3B 91.919 198 12 2 247 443 578286771 578286577 8.760000e-70 274.0
32 TraesCS1D01G270300 chr2D 95.000 200 9 1 245 443 26457691 26457890 1.860000e-81 313.0
33 TraesCS1D01G270300 chr5D 88.618 246 18 2 1 236 505915947 505915702 8.700000e-75 291.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G270300 chr1D 365297086 365299572 2486 False 4593.000000 4593 100.000000 1 2487 1 chr1D.!!$F2 2486
1 TraesCS1D01G270300 chr1D 365244884 365245791 907 False 970.000000 970 86.349000 823 1738 1 chr1D.!!$F1 915
2 TraesCS1D01G270300 chr1B 488658768 488659663 895 False 708.000000 708 81.974000 823 1700 1 chr1B.!!$F1 877
3 TraesCS1D01G270300 chr1B 488745609 488750762 5153 False 587.666667 1437 91.730333 442 1806 3 chr1B.!!$F2 1364
4 TraesCS1D01G270300 chr1A 464115537 464116459 922 False 787.000000 787 82.784000 823 1753 1 chr1A.!!$F1 930
5 TraesCS1D01G270300 chr1A 464121313 464122545 1232 False 456.133333 1090 89.133667 537 1775 3 chr1A.!!$F2 1238
6 TraesCS1D01G270300 chr4A 583724797 583726081 1284 True 343.500000 374 94.524000 1 443 2 chr4A.!!$R1 442
7 TraesCS1D01G270300 chr2A 751945441 751946728 1287 True 347.000000 368 94.835500 1 443 2 chr2A.!!$R1 442
8 TraesCS1D01G270300 chr6A 573400704 573401985 1281 True 337.500000 357 94.178500 1 443 2 chr6A.!!$R2 442
9 TraesCS1D01G270300 chr3B 578286577 578287860 1283 True 294.500000 315 90.959500 1 443 2 chr3B.!!$R1 442

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
480 1339 0.029167 CGCATGCACACAAGACACAA 59.971 50.0 19.57 0.0 0.0 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2081 6879 0.032615 CACCTAGCAGGAGTCTCCCT 60.033 60.0 15.72 8.93 37.67 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 5.357878 ACGATATTCTTGCCATGTGATGTTT 59.642 36.000 0.00 0.00 0.00 2.83
66 67 4.933505 TTCTTGCCATGTGATGTTTTGA 57.066 36.364 0.00 0.00 0.00 2.69
71 72 7.440198 TCTTGCCATGTGATGTTTTGAAAATA 58.560 30.769 0.00 0.00 0.00 1.40
72 73 7.930325 TCTTGCCATGTGATGTTTTGAAAATAA 59.070 29.630 0.00 0.00 0.00 1.40
125 136 1.383803 TTGGGGCCAGGCAAACTTT 60.384 52.632 15.19 0.00 0.00 2.66
201 212 3.985877 TGCCCAAGCATCGAGTTG 58.014 55.556 0.00 0.00 46.52 3.16
349 1208 6.472686 AGAACTGAGAGTAGAACTGTTGTT 57.527 37.500 0.00 0.00 39.42 2.83
405 1264 6.897259 TTTATGTAAGCAGGATTGTACGTC 57.103 37.500 0.00 0.00 0.00 4.34
480 1339 0.029167 CGCATGCACACAAGACACAA 59.971 50.000 19.57 0.00 0.00 3.33
506 1365 0.597118 GTACGTACACACACCCGCAA 60.597 55.000 20.67 0.00 0.00 4.85
507 1366 0.317799 TACGTACACACACCCGCAAT 59.682 50.000 0.00 0.00 0.00 3.56
508 1367 1.225376 ACGTACACACACCCGCAATG 61.225 55.000 0.00 0.00 0.00 2.82
572 1455 2.711922 CGTGGAGTAGCTTCGGCCT 61.712 63.158 0.00 0.00 43.01 5.19
704 5418 7.040340 ACCTTCCTATTATCACGAGATGTACAG 60.040 40.741 5.53 0.00 35.67 2.74
705 5419 6.819397 TCCTATTATCACGAGATGTACAGG 57.181 41.667 5.53 6.88 35.67 4.00
856 5570 1.475034 GCCCAATGCCAGTCTCGAATA 60.475 52.381 0.00 0.00 0.00 1.75
883 5606 1.153127 CGGGCCGGCCTATAAAACA 60.153 57.895 42.70 0.00 36.10 2.83
892 5615 0.958822 CCTATAAAACATGGCCCGGC 59.041 55.000 0.00 0.00 0.00 6.13
946 5670 0.698238 TCCACATTTCCCCTGGTGAG 59.302 55.000 0.00 0.00 33.16 3.51
1015 5743 3.880846 CGATGGCCGGCAAAGCTC 61.881 66.667 30.85 11.20 33.91 4.09
1212 5948 3.707700 CGGTAAGCACACGCGCAA 61.708 61.111 5.73 0.00 45.49 4.85
1280 6031 4.331443 CCAGACGACTCATATATCTCTCCG 59.669 50.000 0.00 0.00 0.00 4.63
1494 6245 2.750237 GTGCCCGTGATCCAACCC 60.750 66.667 0.00 0.00 0.00 4.11
1495 6246 3.253061 TGCCCGTGATCCAACCCA 61.253 61.111 0.00 0.00 0.00 4.51
1496 6247 2.275418 GCCCGTGATCCAACCCAT 59.725 61.111 0.00 0.00 0.00 4.00
1504 6255 3.474600 GTGATCCAACCCATCTCATCTG 58.525 50.000 0.00 0.00 0.00 2.90
1562 6347 4.634184 AGCTACGATCAACGACAACTAT 57.366 40.909 0.00 0.00 45.77 2.12
1570 6356 5.839753 CGATCAACGACAACTATAGACTACG 59.160 44.000 6.78 9.22 45.77 3.51
1621 6410 4.158764 ACTCAAACTAGTGCTGCTACCTAG 59.841 45.833 15.25 15.25 0.00 3.02
1622 6411 4.087182 TCAAACTAGTGCTGCTACCTAGT 58.913 43.478 16.18 16.18 32.90 2.57
1623 6412 5.258841 TCAAACTAGTGCTGCTACCTAGTA 58.741 41.667 19.76 8.54 31.51 1.82
1624 6413 5.125097 TCAAACTAGTGCTGCTACCTAGTAC 59.875 44.000 19.76 2.06 31.51 2.73
1625 6414 4.506937 ACTAGTGCTGCTACCTAGTACT 57.493 45.455 18.73 0.00 42.50 2.73
1626 6415 5.627182 ACTAGTGCTGCTACCTAGTACTA 57.373 43.478 18.73 1.89 40.72 1.82
1700 6494 4.077300 TGTTTGCTGTCTCATTCTCACT 57.923 40.909 0.00 0.00 0.00 3.41
1701 6495 4.060900 TGTTTGCTGTCTCATTCTCACTC 58.939 43.478 0.00 0.00 0.00 3.51
1702 6496 4.060900 GTTTGCTGTCTCATTCTCACTCA 58.939 43.478 0.00 0.00 0.00 3.41
1703 6497 3.309961 TGCTGTCTCATTCTCACTCAC 57.690 47.619 0.00 0.00 0.00 3.51
1727 6521 4.657055 CATTCGTAATTGCCGTGAATTGA 58.343 39.130 0.00 0.00 0.00 2.57
1728 6522 4.335082 TTCGTAATTGCCGTGAATTGAG 57.665 40.909 0.00 0.00 0.00 3.02
1738 6536 4.941263 TGCCGTGAATTGAGCTACTAAAAT 59.059 37.500 0.00 0.00 0.00 1.82
1739 6537 5.414454 TGCCGTGAATTGAGCTACTAAAATT 59.586 36.000 0.00 0.00 0.00 1.82
1741 6539 6.905609 GCCGTGAATTGAGCTACTAAAATTAC 59.094 38.462 0.00 0.00 0.00 1.89
1756 6554 5.950758 AAAATTACTGGTGCGTATGTTCA 57.049 34.783 0.00 0.00 0.00 3.18
1760 6558 6.785488 ATTACTGGTGCGTATGTTCATATG 57.215 37.500 0.00 0.00 0.00 1.78
1775 6573 3.855858 TCATATGTGCACGTGTGTATGT 58.144 40.909 28.25 5.95 0.00 2.29
1780 6578 2.093799 CACGTGTGTATGTGCGCG 59.906 61.111 7.58 0.00 43.25 6.86
1781 6579 2.049894 ACGTGTGTATGTGCGCGA 60.050 55.556 12.10 0.00 40.54 5.87
1782 6580 1.445410 ACGTGTGTATGTGCGCGAT 60.445 52.632 12.10 0.00 40.54 4.58
1783 6581 1.011968 ACGTGTGTATGTGCGCGATT 61.012 50.000 12.10 0.00 40.54 3.34
1784 6582 0.917939 CGTGTGTATGTGCGCGATTA 59.082 50.000 12.10 0.00 40.54 1.75
1785 6583 1.521006 CGTGTGTATGTGCGCGATTAT 59.479 47.619 12.10 1.98 40.54 1.28
1786 6584 2.656368 CGTGTGTATGTGCGCGATTATG 60.656 50.000 12.10 0.00 40.54 1.90
1791 6589 2.880822 ATGTGCGCGATTATGTATGC 57.119 45.000 12.10 0.00 0.00 3.14
1806 6604 7.749539 TTATGTATGCGATCAACCGTATATG 57.250 36.000 0.00 0.00 38.83 1.78
1807 6605 4.490743 TGTATGCGATCAACCGTATATGG 58.509 43.478 9.60 9.60 38.83 2.74
1808 6606 3.953712 ATGCGATCAACCGTATATGGA 57.046 42.857 18.22 0.00 33.31 3.41
1809 6607 3.297830 TGCGATCAACCGTATATGGAG 57.702 47.619 18.22 9.55 0.00 3.86
1810 6608 2.029380 TGCGATCAACCGTATATGGAGG 60.029 50.000 18.22 8.87 0.00 4.30
1811 6609 2.230508 GCGATCAACCGTATATGGAGGA 59.769 50.000 18.22 13.64 0.00 3.71
1812 6610 3.834610 CGATCAACCGTATATGGAGGAC 58.165 50.000 18.22 8.03 0.00 3.85
1813 6611 3.367087 CGATCAACCGTATATGGAGGACC 60.367 52.174 18.22 4.67 0.00 4.46
1814 6612 2.322658 TCAACCGTATATGGAGGACCC 58.677 52.381 18.22 0.00 34.81 4.46
1815 6613 2.090943 TCAACCGTATATGGAGGACCCT 60.091 50.000 18.22 0.00 35.38 4.34
1816 6614 2.011122 ACCGTATATGGAGGACCCTG 57.989 55.000 18.22 0.00 35.38 4.45
1817 6615 1.502039 ACCGTATATGGAGGACCCTGA 59.498 52.381 18.22 0.00 35.38 3.86
1818 6616 2.111972 ACCGTATATGGAGGACCCTGAT 59.888 50.000 18.22 0.00 35.38 2.90
1819 6617 2.497675 CCGTATATGGAGGACCCTGATG 59.502 54.545 4.85 0.00 35.38 3.07
1820 6618 2.497675 CGTATATGGAGGACCCTGATGG 59.502 54.545 0.00 0.00 41.37 3.51
1831 6629 0.548031 CCCTGATGGGTGCTACACAT 59.452 55.000 4.03 4.03 46.60 3.21
1832 6630 1.671979 CCTGATGGGTGCTACACATG 58.328 55.000 8.48 0.00 43.39 3.21
1833 6631 1.210234 CCTGATGGGTGCTACACATGA 59.790 52.381 8.48 0.55 43.39 3.07
1834 6632 2.158711 CCTGATGGGTGCTACACATGAT 60.159 50.000 8.48 0.00 43.39 2.45
1835 6633 3.071457 CCTGATGGGTGCTACACATGATA 59.929 47.826 8.48 0.00 43.39 2.15
1836 6634 4.444733 CCTGATGGGTGCTACACATGATAA 60.445 45.833 8.48 0.00 43.39 1.75
1837 6635 4.450976 TGATGGGTGCTACACATGATAAC 58.549 43.478 8.48 0.00 43.39 1.89
1838 6636 4.164030 TGATGGGTGCTACACATGATAACT 59.836 41.667 8.48 0.00 43.39 2.24
1839 6637 4.137116 TGGGTGCTACACATGATAACTC 57.863 45.455 0.00 0.00 35.86 3.01
1840 6638 3.118408 TGGGTGCTACACATGATAACTCC 60.118 47.826 0.00 0.00 35.86 3.85
1841 6639 3.123804 GGTGCTACACATGATAACTCCG 58.876 50.000 0.00 0.00 35.86 4.63
1842 6640 3.181479 GGTGCTACACATGATAACTCCGA 60.181 47.826 0.00 0.00 35.86 4.55
1843 6641 4.430007 GTGCTACACATGATAACTCCGAA 58.570 43.478 0.00 0.00 34.08 4.30
1844 6642 4.267928 GTGCTACACATGATAACTCCGAAC 59.732 45.833 0.00 0.00 34.08 3.95
1845 6643 3.486108 GCTACACATGATAACTCCGAACG 59.514 47.826 0.00 0.00 0.00 3.95
1846 6644 3.587797 ACACATGATAACTCCGAACGT 57.412 42.857 0.00 0.00 0.00 3.99
1847 6645 4.707030 ACACATGATAACTCCGAACGTA 57.293 40.909 0.00 0.00 0.00 3.57
1848 6646 5.258456 ACACATGATAACTCCGAACGTAT 57.742 39.130 0.00 0.00 0.00 3.06
1849 6647 5.657474 ACACATGATAACTCCGAACGTATT 58.343 37.500 0.00 0.00 0.00 1.89
1850 6648 6.103997 ACACATGATAACTCCGAACGTATTT 58.896 36.000 0.00 0.00 0.00 1.40
1851 6649 6.592607 ACACATGATAACTCCGAACGTATTTT 59.407 34.615 0.00 0.00 0.00 1.82
1852 6650 7.760794 ACACATGATAACTCCGAACGTATTTTA 59.239 33.333 0.00 0.00 0.00 1.52
1853 6651 8.761497 CACATGATAACTCCGAACGTATTTTAT 58.239 33.333 0.00 0.00 0.00 1.40
1854 6652 9.970395 ACATGATAACTCCGAACGTATTTTATA 57.030 29.630 0.00 0.00 0.00 0.98
1861 6659 9.860898 AACTCCGAACGTATTTTATAGTAAGTT 57.139 29.630 0.00 0.00 0.00 2.66
1862 6660 9.860898 ACTCCGAACGTATTTTATAGTAAGTTT 57.139 29.630 0.00 0.00 0.00 2.66
1872 6670 8.915871 ATTTTATAGTAAGTTTAGTGACGCGA 57.084 30.769 15.93 0.00 0.00 5.87
1873 6671 7.959718 TTTATAGTAAGTTTAGTGACGCGAG 57.040 36.000 15.93 0.00 0.00 5.03
1874 6672 2.593257 AGTAAGTTTAGTGACGCGAGC 58.407 47.619 15.93 4.68 0.00 5.03
1875 6673 2.030540 AGTAAGTTTAGTGACGCGAGCA 60.031 45.455 15.93 7.89 0.00 4.26
1876 6674 2.080286 AAGTTTAGTGACGCGAGCAT 57.920 45.000 15.93 0.00 0.00 3.79
1877 6675 1.350193 AGTTTAGTGACGCGAGCATG 58.650 50.000 15.93 0.00 0.00 4.06
1878 6676 1.067846 AGTTTAGTGACGCGAGCATGA 60.068 47.619 15.93 0.00 0.00 3.07
1879 6677 1.059264 GTTTAGTGACGCGAGCATGAC 59.941 52.381 15.93 0.00 0.00 3.06
1880 6678 0.242555 TTAGTGACGCGAGCATGACA 59.757 50.000 15.93 0.00 0.00 3.58
1881 6679 0.242555 TAGTGACGCGAGCATGACAA 59.757 50.000 15.93 0.00 0.00 3.18
1882 6680 1.130613 GTGACGCGAGCATGACAAC 59.869 57.895 15.93 0.00 0.00 3.32
1883 6681 1.006220 TGACGCGAGCATGACAACT 60.006 52.632 15.93 0.00 0.00 3.16
1884 6682 0.599991 TGACGCGAGCATGACAACTT 60.600 50.000 15.93 0.00 0.00 2.66
1885 6683 0.512952 GACGCGAGCATGACAACTTT 59.487 50.000 15.93 0.00 0.00 2.66
1886 6684 1.724623 GACGCGAGCATGACAACTTTA 59.275 47.619 15.93 0.00 0.00 1.85
1887 6685 1.459592 ACGCGAGCATGACAACTTTAC 59.540 47.619 15.93 0.00 0.00 2.01
1888 6686 1.726791 CGCGAGCATGACAACTTTACT 59.273 47.619 0.00 0.00 0.00 2.24
1889 6687 2.157668 CGCGAGCATGACAACTTTACTT 59.842 45.455 0.00 0.00 0.00 2.24
1890 6688 3.482786 GCGAGCATGACAACTTTACTTG 58.517 45.455 0.00 0.00 0.00 3.16
1891 6689 3.058914 GCGAGCATGACAACTTTACTTGT 60.059 43.478 0.00 0.00 37.06 3.16
1899 6697 4.848757 GACAACTTTACTTGTCAAGCCTG 58.151 43.478 12.66 3.63 46.38 4.85
1900 6698 4.523083 ACAACTTTACTTGTCAAGCCTGA 58.477 39.130 12.66 0.00 27.41 3.86
1913 6711 5.659440 TCAAGCCTGACAACTTTCTTTTT 57.341 34.783 0.00 0.00 0.00 1.94
1914 6712 5.650543 TCAAGCCTGACAACTTTCTTTTTC 58.349 37.500 0.00 0.00 0.00 2.29
1915 6713 5.184864 TCAAGCCTGACAACTTTCTTTTTCA 59.815 36.000 0.00 0.00 0.00 2.69
1916 6714 5.659440 AGCCTGACAACTTTCTTTTTCAA 57.341 34.783 0.00 0.00 0.00 2.69
1917 6715 6.225981 AGCCTGACAACTTTCTTTTTCAAT 57.774 33.333 0.00 0.00 0.00 2.57
1918 6716 6.044682 AGCCTGACAACTTTCTTTTTCAATG 58.955 36.000 0.00 0.00 0.00 2.82
1919 6717 5.812127 GCCTGACAACTTTCTTTTTCAATGT 59.188 36.000 0.00 0.00 0.00 2.71
1920 6718 6.019559 GCCTGACAACTTTCTTTTTCAATGTC 60.020 38.462 0.00 0.00 37.15 3.06
1921 6719 7.035004 CCTGACAACTTTCTTTTTCAATGTCA 58.965 34.615 0.00 0.00 42.39 3.58
1922 6720 7.545265 CCTGACAACTTTCTTTTTCAATGTCAA 59.455 33.333 6.71 0.00 43.51 3.18
1923 6721 8.464770 TGACAACTTTCTTTTTCAATGTCAAG 57.535 30.769 3.05 0.00 41.87 3.02
1924 6722 8.087750 TGACAACTTTCTTTTTCAATGTCAAGT 58.912 29.630 3.05 0.00 41.87 3.16
1925 6723 8.831715 ACAACTTTCTTTTTCAATGTCAAGTT 57.168 26.923 0.00 0.00 34.35 2.66
1926 6724 9.271828 ACAACTTTCTTTTTCAATGTCAAGTTT 57.728 25.926 0.00 0.00 32.26 2.66
1927 6725 9.745323 CAACTTTCTTTTTCAATGTCAAGTTTC 57.255 29.630 0.00 0.00 32.26 2.78
1928 6726 9.487790 AACTTTCTTTTTCAATGTCAAGTTTCA 57.512 25.926 0.00 0.00 30.81 2.69
1929 6727 9.657419 ACTTTCTTTTTCAATGTCAAGTTTCAT 57.343 25.926 0.00 0.00 0.00 2.57
1995 6793 7.596248 AGTTGTAGAAAATGTCATTGTCAATGC 59.404 33.333 19.02 14.52 38.77 3.56
1996 6794 7.218228 TGTAGAAAATGTCATTGTCAATGCT 57.782 32.000 19.02 11.42 38.77 3.79
1997 6795 7.660112 TGTAGAAAATGTCATTGTCAATGCTT 58.340 30.769 19.02 10.29 38.77 3.91
1998 6796 8.143193 TGTAGAAAATGTCATTGTCAATGCTTT 58.857 29.630 19.02 14.63 38.77 3.51
1999 6797 7.416154 AGAAAATGTCATTGTCAATGCTTTG 57.584 32.000 19.02 5.99 38.77 2.77
2000 6798 6.987992 AGAAAATGTCATTGTCAATGCTTTGT 59.012 30.769 19.02 13.16 38.77 2.83
2001 6799 6.533819 AAATGTCATTGTCAATGCTTTGTG 57.466 33.333 19.02 3.76 38.77 3.33
2002 6800 4.652421 TGTCATTGTCAATGCTTTGTGT 57.348 36.364 19.02 0.00 38.77 3.72
2003 6801 4.609947 TGTCATTGTCAATGCTTTGTGTC 58.390 39.130 19.02 5.45 38.77 3.67
2004 6802 4.097589 TGTCATTGTCAATGCTTTGTGTCA 59.902 37.500 19.02 7.57 38.77 3.58
2005 6803 4.442073 GTCATTGTCAATGCTTTGTGTCAC 59.558 41.667 19.02 6.59 38.77 3.67
2006 6804 4.097589 TCATTGTCAATGCTTTGTGTCACA 59.902 37.500 19.02 0.18 38.77 3.58
2007 6805 3.419264 TGTCAATGCTTTGTGTCACAC 57.581 42.857 4.80 0.00 34.32 3.82
2008 6806 2.223226 TGTCAATGCTTTGTGTCACACG 60.223 45.455 4.80 1.03 37.14 4.49
2009 6807 2.013400 TCAATGCTTTGTGTCACACGT 58.987 42.857 4.80 0.00 37.14 4.49
2010 6808 2.110990 CAATGCTTTGTGTCACACGTG 58.889 47.619 15.48 15.48 37.14 4.49
2011 6809 1.662517 ATGCTTTGTGTCACACGTGA 58.337 45.000 25.01 0.00 37.14 4.35
2012 6810 1.662517 TGCTTTGTGTCACACGTGAT 58.337 45.000 25.01 3.37 42.18 3.06
2013 6811 2.827652 TGCTTTGTGTCACACGTGATA 58.172 42.857 25.01 6.52 42.18 2.15
2022 6820 6.887376 GTGTCACACGTGATACTTATCATT 57.113 37.500 25.01 0.00 44.81 2.57
2023 6821 7.290857 GTGTCACACGTGATACTTATCATTT 57.709 36.000 25.01 0.00 44.81 2.32
2024 6822 7.173419 GTGTCACACGTGATACTTATCATTTG 58.827 38.462 25.01 5.02 44.81 2.32
2025 6823 6.312672 TGTCACACGTGATACTTATCATTTGG 59.687 38.462 25.01 0.00 43.82 3.28
2026 6824 5.815222 TCACACGTGATACTTATCATTTGGG 59.185 40.000 25.01 4.60 43.82 4.12
2027 6825 5.584649 CACACGTGATACTTATCATTTGGGT 59.415 40.000 25.01 1.33 43.82 4.51
2028 6826 6.759356 CACACGTGATACTTATCATTTGGGTA 59.241 38.462 25.01 0.00 43.82 3.69
2029 6827 7.441157 CACACGTGATACTTATCATTTGGGTAT 59.559 37.037 25.01 0.00 43.82 2.73
2030 6828 8.644216 ACACGTGATACTTATCATTTGGGTATA 58.356 33.333 25.01 0.00 43.82 1.47
2031 6829 9.653287 CACGTGATACTTATCATTTGGGTATAT 57.347 33.333 10.90 0.00 43.82 0.86
2038 6836 8.857694 ACTTATCATTTGGGTATATTAACCGG 57.142 34.615 0.00 0.00 38.82 5.28
2039 6837 8.442374 ACTTATCATTTGGGTATATTAACCGGT 58.558 33.333 0.00 0.00 38.82 5.28
2040 6838 8.624367 TTATCATTTGGGTATATTAACCGGTG 57.376 34.615 8.52 0.00 38.82 4.94
2041 6839 6.003859 TCATTTGGGTATATTAACCGGTGT 57.996 37.500 8.52 0.36 38.82 4.16
2042 6840 6.424883 TCATTTGGGTATATTAACCGGTGTT 58.575 36.000 8.52 0.00 38.82 3.32
2043 6841 6.319152 TCATTTGGGTATATTAACCGGTGTTG 59.681 38.462 8.52 0.00 38.82 3.33
2044 6842 3.543665 TGGGTATATTAACCGGTGTTGC 58.456 45.455 8.52 0.00 38.82 4.17
2045 6843 3.200385 TGGGTATATTAACCGGTGTTGCT 59.800 43.478 8.52 0.00 38.82 3.91
2046 6844 4.201657 GGGTATATTAACCGGTGTTGCTT 58.798 43.478 8.52 0.00 40.73 3.91
2047 6845 4.274214 GGGTATATTAACCGGTGTTGCTTC 59.726 45.833 8.52 0.00 40.73 3.86
2048 6846 5.121105 GGTATATTAACCGGTGTTGCTTCT 58.879 41.667 8.52 0.00 35.87 2.85
2049 6847 5.007332 GGTATATTAACCGGTGTTGCTTCTG 59.993 44.000 8.52 0.00 35.87 3.02
2050 6848 2.335316 TTAACCGGTGTTGCTTCTGT 57.665 45.000 8.52 0.00 35.87 3.41
2051 6849 1.588674 TAACCGGTGTTGCTTCTGTG 58.411 50.000 8.52 0.00 35.87 3.66
2052 6850 1.101049 AACCGGTGTTGCTTCTGTGG 61.101 55.000 8.52 0.00 32.13 4.17
2053 6851 1.525995 CCGGTGTTGCTTCTGTGGT 60.526 57.895 0.00 0.00 0.00 4.16
2054 6852 1.507141 CCGGTGTTGCTTCTGTGGTC 61.507 60.000 0.00 0.00 0.00 4.02
2055 6853 0.532862 CGGTGTTGCTTCTGTGGTCT 60.533 55.000 0.00 0.00 0.00 3.85
2056 6854 1.680338 GGTGTTGCTTCTGTGGTCTT 58.320 50.000 0.00 0.00 0.00 3.01
2057 6855 2.024414 GGTGTTGCTTCTGTGGTCTTT 58.976 47.619 0.00 0.00 0.00 2.52
2058 6856 2.427095 GGTGTTGCTTCTGTGGTCTTTT 59.573 45.455 0.00 0.00 0.00 2.27
2059 6857 3.119137 GGTGTTGCTTCTGTGGTCTTTTT 60.119 43.478 0.00 0.00 0.00 1.94
2090 6888 2.267324 GCAGGTGCAGGGAGACTC 59.733 66.667 0.00 0.00 41.59 3.36
2091 6889 2.985456 CAGGTGCAGGGAGACTCC 59.015 66.667 13.60 13.60 35.23 3.85
2092 6890 1.611851 CAGGTGCAGGGAGACTCCT 60.612 63.158 20.97 4.63 36.57 3.69
2098 6896 2.819477 CAGGGAGACTCCTGCTAGG 58.181 63.158 20.97 1.49 46.47 3.02
2099 6897 0.032615 CAGGGAGACTCCTGCTAGGT 60.033 60.000 20.97 0.00 46.47 3.08
2100 6898 0.032615 AGGGAGACTCCTGCTAGGTG 60.033 60.000 20.97 3.18 36.57 4.00
2101 6899 1.045911 GGGAGACTCCTGCTAGGTGG 61.046 65.000 20.97 4.01 36.57 4.61
2102 6900 1.681486 GGAGACTCCTGCTAGGTGGC 61.681 65.000 14.72 5.85 37.15 5.01
2103 6901 0.972983 GAGACTCCTGCTAGGTGGCA 60.973 60.000 11.18 0.00 39.34 4.92
2104 6902 0.545309 AGACTCCTGCTAGGTGGCAA 60.545 55.000 11.18 0.00 39.34 4.52
2105 6903 0.324943 GACTCCTGCTAGGTGGCAAA 59.675 55.000 0.00 0.00 41.94 3.68
2106 6904 0.326264 ACTCCTGCTAGGTGGCAAAG 59.674 55.000 0.00 0.00 41.94 2.77
2107 6905 0.326264 CTCCTGCTAGGTGGCAAAGT 59.674 55.000 0.00 0.00 41.94 2.66
2108 6906 1.555075 CTCCTGCTAGGTGGCAAAGTA 59.445 52.381 0.00 0.00 41.94 2.24
2109 6907 1.555075 TCCTGCTAGGTGGCAAAGTAG 59.445 52.381 0.00 0.00 41.94 2.57
2110 6908 1.373570 CTGCTAGGTGGCAAAGTAGC 58.626 55.000 14.13 14.13 41.94 3.58
2111 6909 0.690192 TGCTAGGTGGCAAAGTAGCA 59.310 50.000 17.94 17.94 44.32 3.49
2112 6910 1.073125 TGCTAGGTGGCAAAGTAGCAA 59.927 47.619 19.01 7.65 43.73 3.91
2113 6911 2.290896 TGCTAGGTGGCAAAGTAGCAAT 60.291 45.455 19.01 0.00 43.73 3.56
2114 6912 3.054728 TGCTAGGTGGCAAAGTAGCAATA 60.055 43.478 19.01 2.65 43.73 1.90
2115 6913 4.137543 GCTAGGTGGCAAAGTAGCAATAT 58.862 43.478 15.48 0.00 38.23 1.28
2116 6914 5.163248 TGCTAGGTGGCAAAGTAGCAATATA 60.163 40.000 19.01 2.08 43.73 0.86
2117 6915 5.409826 GCTAGGTGGCAAAGTAGCAATATAG 59.590 44.000 15.48 0.00 38.23 1.31
2118 6916 4.137543 AGGTGGCAAAGTAGCAATATAGC 58.862 43.478 0.00 0.00 35.83 2.97
2120 6918 5.071788 AGGTGGCAAAGTAGCAATATAGCTA 59.928 40.000 0.00 0.00 44.50 3.32
2128 6926 3.961480 AGCAATATAGCTATGGCACGA 57.039 42.857 16.77 0.00 44.50 4.35
2129 6927 3.589988 AGCAATATAGCTATGGCACGAC 58.410 45.455 16.77 0.00 44.50 4.34
2130 6928 3.259374 AGCAATATAGCTATGGCACGACT 59.741 43.478 16.77 2.10 44.50 4.18
2131 6929 3.369147 GCAATATAGCTATGGCACGACTG 59.631 47.826 16.77 0.00 41.70 3.51
2132 6930 4.809673 CAATATAGCTATGGCACGACTGA 58.190 43.478 16.77 0.00 41.70 3.41
2133 6931 5.230182 CAATATAGCTATGGCACGACTGAA 58.770 41.667 16.77 0.00 41.70 3.02
2134 6932 3.819564 ATAGCTATGGCACGACTGAAA 57.180 42.857 5.15 0.00 41.70 2.69
2135 6933 2.472695 AGCTATGGCACGACTGAAAA 57.527 45.000 3.10 0.00 41.70 2.29
2136 6934 2.991250 AGCTATGGCACGACTGAAAAT 58.009 42.857 3.10 0.00 41.70 1.82
2137 6935 2.939103 AGCTATGGCACGACTGAAAATC 59.061 45.455 3.10 0.00 41.70 2.17
2138 6936 2.032178 GCTATGGCACGACTGAAAATCC 59.968 50.000 0.00 0.00 38.54 3.01
2139 6937 2.198827 ATGGCACGACTGAAAATCCA 57.801 45.000 0.00 0.00 0.00 3.41
2140 6938 2.198827 TGGCACGACTGAAAATCCAT 57.801 45.000 0.00 0.00 0.00 3.41
2141 6939 2.083774 TGGCACGACTGAAAATCCATC 58.916 47.619 0.00 0.00 0.00 3.51
2142 6940 2.290260 TGGCACGACTGAAAATCCATCT 60.290 45.455 0.00 0.00 0.00 2.90
2143 6941 2.352960 GGCACGACTGAAAATCCATCTC 59.647 50.000 0.00 0.00 0.00 2.75
2144 6942 3.265791 GCACGACTGAAAATCCATCTCT 58.734 45.455 0.00 0.00 0.00 3.10
2145 6943 3.063180 GCACGACTGAAAATCCATCTCTG 59.937 47.826 0.00 0.00 0.00 3.35
2146 6944 3.063180 CACGACTGAAAATCCATCTCTGC 59.937 47.826 0.00 0.00 0.00 4.26
2147 6945 3.264947 CGACTGAAAATCCATCTCTGCA 58.735 45.455 0.00 0.00 0.00 4.41
2148 6946 3.063180 CGACTGAAAATCCATCTCTGCAC 59.937 47.826 0.00 0.00 0.00 4.57
2149 6947 3.350833 ACTGAAAATCCATCTCTGCACC 58.649 45.455 0.00 0.00 0.00 5.01
2150 6948 2.686915 CTGAAAATCCATCTCTGCACCC 59.313 50.000 0.00 0.00 0.00 4.61
2151 6949 1.672881 GAAAATCCATCTCTGCACCCG 59.327 52.381 0.00 0.00 0.00 5.28
2152 6950 0.911769 AAATCCATCTCTGCACCCGA 59.088 50.000 0.00 0.00 0.00 5.14
2153 6951 0.467384 AATCCATCTCTGCACCCGAG 59.533 55.000 0.00 0.00 0.00 4.63
2154 6952 2.037620 ATCCATCTCTGCACCCGAGC 62.038 60.000 0.00 0.00 0.00 5.03
2155 6953 2.729479 CCATCTCTGCACCCGAGCT 61.729 63.158 0.00 0.00 34.99 4.09
2156 6954 1.227205 CATCTCTGCACCCGAGCTC 60.227 63.158 2.73 2.73 34.99 4.09
2157 6955 1.683707 ATCTCTGCACCCGAGCTCA 60.684 57.895 15.40 0.00 34.99 4.26
2158 6956 1.047596 ATCTCTGCACCCGAGCTCAT 61.048 55.000 15.40 0.00 34.99 2.90
2159 6957 1.227205 CTCTGCACCCGAGCTCATC 60.227 63.158 15.40 0.00 34.99 2.92
2160 6958 1.674764 CTCTGCACCCGAGCTCATCT 61.675 60.000 15.40 0.00 34.99 2.90
2161 6959 1.521010 CTGCACCCGAGCTCATCTG 60.521 63.158 15.40 5.86 34.99 2.90
2162 6960 2.894387 GCACCCGAGCTCATCTGC 60.894 66.667 15.40 12.21 0.00 4.26
2163 6961 2.580815 CACCCGAGCTCATCTGCA 59.419 61.111 15.40 0.00 34.99 4.41
2164 6962 1.812922 CACCCGAGCTCATCTGCAC 60.813 63.158 15.40 0.00 34.99 4.57
2165 6963 2.202987 CCCGAGCTCATCTGCACC 60.203 66.667 15.40 0.00 34.99 5.01
2166 6964 2.729479 CCCGAGCTCATCTGCACCT 61.729 63.158 15.40 0.00 34.99 4.00
2167 6965 1.521010 CCGAGCTCATCTGCACCTG 60.521 63.158 15.40 0.00 34.99 4.00
2168 6966 2.172372 CGAGCTCATCTGCACCTGC 61.172 63.158 15.40 0.00 42.50 4.85
2169 6967 1.818785 GAGCTCATCTGCACCTGCC 60.819 63.158 9.40 0.00 41.18 4.85
2170 6968 2.827642 GCTCATCTGCACCTGCCC 60.828 66.667 0.00 0.00 41.18 5.36
2171 6969 2.996395 CTCATCTGCACCTGCCCT 59.004 61.111 0.00 0.00 41.18 5.19
2172 6970 1.451567 CTCATCTGCACCTGCCCTG 60.452 63.158 0.00 0.00 41.18 4.45
2173 6971 1.907222 CTCATCTGCACCTGCCCTGA 61.907 60.000 0.00 0.00 41.18 3.86
2174 6972 1.226542 CATCTGCACCTGCCCTGAT 59.773 57.895 0.00 0.00 41.18 2.90
2175 6973 1.101635 CATCTGCACCTGCCCTGATG 61.102 60.000 9.21 9.21 41.18 3.07
2176 6974 1.276859 ATCTGCACCTGCCCTGATGA 61.277 55.000 0.00 0.00 41.18 2.92
2177 6975 1.001764 CTGCACCTGCCCTGATGAA 60.002 57.895 0.00 0.00 41.18 2.57
2178 6976 0.609957 CTGCACCTGCCCTGATGAAA 60.610 55.000 0.00 0.00 41.18 2.69
2179 6977 0.178967 TGCACCTGCCCTGATGAAAA 60.179 50.000 0.00 0.00 41.18 2.29
2180 6978 0.968405 GCACCTGCCCTGATGAAAAA 59.032 50.000 0.00 0.00 34.31 1.94
2245 7043 6.956299 AATGTGCTTTAGACAATTTGATGC 57.044 33.333 2.79 0.00 0.00 3.91
2246 7044 4.475028 TGTGCTTTAGACAATTTGATGCG 58.525 39.130 2.79 0.00 0.00 4.73
2247 7045 4.023279 TGTGCTTTAGACAATTTGATGCGT 60.023 37.500 2.79 0.00 0.00 5.24
2248 7046 4.321745 GTGCTTTAGACAATTTGATGCGTG 59.678 41.667 2.79 0.00 0.00 5.34
2249 7047 4.215185 TGCTTTAGACAATTTGATGCGTGA 59.785 37.500 2.79 0.00 0.00 4.35
2250 7048 4.790140 GCTTTAGACAATTTGATGCGTGAG 59.210 41.667 2.79 0.00 0.00 3.51
2251 7049 4.944962 TTAGACAATTTGATGCGTGAGG 57.055 40.909 2.79 0.00 0.00 3.86
2252 7050 2.783135 AGACAATTTGATGCGTGAGGT 58.217 42.857 2.79 0.00 0.00 3.85
2253 7051 2.744202 AGACAATTTGATGCGTGAGGTC 59.256 45.455 2.79 0.00 0.00 3.85
2254 7052 1.812571 ACAATTTGATGCGTGAGGTCC 59.187 47.619 2.79 0.00 0.00 4.46
2255 7053 1.086696 AATTTGATGCGTGAGGTCCG 58.913 50.000 0.00 0.00 0.00 4.79
2256 7054 0.036388 ATTTGATGCGTGAGGTCCGT 60.036 50.000 0.00 0.00 0.00 4.69
2257 7055 0.250124 TTTGATGCGTGAGGTCCGTT 60.250 50.000 0.00 0.00 0.00 4.44
2258 7056 0.250124 TTGATGCGTGAGGTCCGTTT 60.250 50.000 0.00 0.00 0.00 3.60
2259 7057 0.669318 TGATGCGTGAGGTCCGTTTC 60.669 55.000 0.00 0.00 0.00 2.78
2260 7058 0.669318 GATGCGTGAGGTCCGTTTCA 60.669 55.000 0.00 0.00 0.00 2.69
2261 7059 0.250124 ATGCGTGAGGTCCGTTTCAA 60.250 50.000 0.00 0.00 0.00 2.69
2262 7060 0.250124 TGCGTGAGGTCCGTTTCAAT 60.250 50.000 0.00 0.00 0.00 2.57
2263 7061 0.872388 GCGTGAGGTCCGTTTCAATT 59.128 50.000 0.00 0.00 0.00 2.32
2264 7062 1.265905 GCGTGAGGTCCGTTTCAATTT 59.734 47.619 0.00 0.00 0.00 1.82
2265 7063 2.287368 GCGTGAGGTCCGTTTCAATTTT 60.287 45.455 0.00 0.00 0.00 1.82
2266 7064 3.551551 CGTGAGGTCCGTTTCAATTTTC 58.448 45.455 0.00 0.00 0.00 2.29
2267 7065 3.002862 CGTGAGGTCCGTTTCAATTTTCA 59.997 43.478 0.00 0.00 0.00 2.69
2268 7066 4.496673 CGTGAGGTCCGTTTCAATTTTCAA 60.497 41.667 0.00 0.00 0.00 2.69
2269 7067 5.344884 GTGAGGTCCGTTTCAATTTTCAAA 58.655 37.500 0.00 0.00 0.00 2.69
2270 7068 5.983118 GTGAGGTCCGTTTCAATTTTCAAAT 59.017 36.000 0.00 0.00 0.00 2.32
2271 7069 6.143919 GTGAGGTCCGTTTCAATTTTCAAATC 59.856 38.462 0.00 0.00 0.00 2.17
2272 7070 6.155475 AGGTCCGTTTCAATTTTCAAATCA 57.845 33.333 0.00 0.00 0.00 2.57
2273 7071 6.758254 AGGTCCGTTTCAATTTTCAAATCAT 58.242 32.000 0.00 0.00 0.00 2.45
2274 7072 7.216494 AGGTCCGTTTCAATTTTCAAATCATT 58.784 30.769 0.00 0.00 0.00 2.57
2275 7073 7.714813 AGGTCCGTTTCAATTTTCAAATCATTT 59.285 29.630 0.00 0.00 0.00 2.32
2276 7074 7.798052 GGTCCGTTTCAATTTTCAAATCATTTG 59.202 33.333 3.46 3.46 41.96 2.32
2277 7075 7.798052 GTCCGTTTCAATTTTCAAATCATTTGG 59.202 33.333 10.30 0.00 40.98 3.28
2278 7076 7.712639 TCCGTTTCAATTTTCAAATCATTTGGA 59.287 29.630 10.30 0.00 40.98 3.53
2279 7077 7.798052 CCGTTTCAATTTTCAAATCATTTGGAC 59.202 33.333 10.30 0.00 40.98 4.02
2280 7078 8.333908 CGTTTCAATTTTCAAATCATTTGGACA 58.666 29.630 10.30 0.00 40.98 4.02
2283 7081 9.781633 TTCAATTTTCAAATCATTTGGACATCT 57.218 25.926 10.30 0.00 40.98 2.90
2287 7085 9.880157 ATTTTCAAATCATTTGGACATCTAAGG 57.120 29.630 10.30 0.00 40.98 2.69
2288 7086 8.648698 TTTCAAATCATTTGGACATCTAAGGA 57.351 30.769 10.30 0.00 40.98 3.36
2289 7087 8.827832 TTCAAATCATTTGGACATCTAAGGAT 57.172 30.769 10.30 0.00 40.98 3.24
2290 7088 8.455903 TCAAATCATTTGGACATCTAAGGATC 57.544 34.615 10.30 0.00 40.98 3.36
2291 7089 8.277197 TCAAATCATTTGGACATCTAAGGATCT 58.723 33.333 10.30 0.00 40.98 2.75
2292 7090 8.566260 CAAATCATTTGGACATCTAAGGATCTC 58.434 37.037 1.73 0.00 37.01 2.75
2293 7091 7.630005 ATCATTTGGACATCTAAGGATCTCT 57.370 36.000 0.00 0.00 28.64 3.10
2294 7092 7.060383 TCATTTGGACATCTAAGGATCTCTC 57.940 40.000 0.00 0.00 0.00 3.20
2295 7093 6.612863 TCATTTGGACATCTAAGGATCTCTCA 59.387 38.462 0.00 0.00 0.00 3.27
2296 7094 6.477053 TTTGGACATCTAAGGATCTCTCAG 57.523 41.667 0.00 0.00 0.00 3.35
2297 7095 3.894427 TGGACATCTAAGGATCTCTCAGC 59.106 47.826 0.00 0.00 0.00 4.26
2298 7096 3.894427 GGACATCTAAGGATCTCTCAGCA 59.106 47.826 0.00 0.00 0.00 4.41
2299 7097 4.343526 GGACATCTAAGGATCTCTCAGCAA 59.656 45.833 0.00 0.00 0.00 3.91
2300 7098 5.163364 GGACATCTAAGGATCTCTCAGCAAA 60.163 44.000 0.00 0.00 0.00 3.68
2301 7099 6.305272 ACATCTAAGGATCTCTCAGCAAAA 57.695 37.500 0.00 0.00 0.00 2.44
2302 7100 6.715280 ACATCTAAGGATCTCTCAGCAAAAA 58.285 36.000 0.00 0.00 0.00 1.94
2324 7122 8.499288 AAAAAGATAAATTGGGGGTCTGTAAA 57.501 30.769 0.00 0.00 0.00 2.01
2325 7123 8.499288 AAAAGATAAATTGGGGGTCTGTAAAA 57.501 30.769 0.00 0.00 0.00 1.52
2326 7124 8.499288 AAAGATAAATTGGGGGTCTGTAAAAA 57.501 30.769 0.00 0.00 0.00 1.94
2327 7125 8.679344 AAGATAAATTGGGGGTCTGTAAAAAT 57.321 30.769 0.00 0.00 0.00 1.82
2328 7126 9.777008 AAGATAAATTGGGGGTCTGTAAAAATA 57.223 29.630 0.00 0.00 0.00 1.40
2329 7127 9.951866 AGATAAATTGGGGGTCTGTAAAAATAT 57.048 29.630 0.00 0.00 0.00 1.28
2353 7151 4.584327 ACTGGTCATTTACTGTTTTGGC 57.416 40.909 0.00 0.00 0.00 4.52
2354 7152 3.320826 ACTGGTCATTTACTGTTTTGGCC 59.679 43.478 0.00 0.00 34.40 5.36
2355 7153 3.571590 TGGTCATTTACTGTTTTGGCCT 58.428 40.909 3.32 0.00 34.90 5.19
2356 7154 3.320541 TGGTCATTTACTGTTTTGGCCTG 59.679 43.478 3.32 0.00 34.90 4.85
2357 7155 3.572255 GGTCATTTACTGTTTTGGCCTGA 59.428 43.478 3.32 0.00 31.10 3.86
2358 7156 4.220602 GGTCATTTACTGTTTTGGCCTGAT 59.779 41.667 3.32 0.00 31.10 2.90
2359 7157 5.279456 GGTCATTTACTGTTTTGGCCTGATT 60.279 40.000 3.32 0.00 31.10 2.57
2360 7158 6.223120 GTCATTTACTGTTTTGGCCTGATTT 58.777 36.000 3.32 0.00 0.00 2.17
2361 7159 6.146021 GTCATTTACTGTTTTGGCCTGATTTG 59.854 38.462 3.32 0.00 0.00 2.32
2362 7160 5.606348 TTTACTGTTTTGGCCTGATTTGT 57.394 34.783 3.32 0.00 0.00 2.83
2363 7161 5.606348 TTACTGTTTTGGCCTGATTTGTT 57.394 34.783 3.32 0.00 0.00 2.83
2364 7162 4.486125 ACTGTTTTGGCCTGATTTGTTT 57.514 36.364 3.32 0.00 0.00 2.83
2365 7163 4.842574 ACTGTTTTGGCCTGATTTGTTTT 58.157 34.783 3.32 0.00 0.00 2.43
2366 7164 5.252547 ACTGTTTTGGCCTGATTTGTTTTT 58.747 33.333 3.32 0.00 0.00 1.94
2395 7193 4.383850 GAGAGCTGCTCAGATGTCTAAA 57.616 45.455 29.49 0.00 43.38 1.85
2396 7194 4.947645 GAGAGCTGCTCAGATGTCTAAAT 58.052 43.478 29.49 5.90 43.38 1.40
2397 7195 4.695396 AGAGCTGCTCAGATGTCTAAATG 58.305 43.478 29.49 0.00 32.06 2.32
2398 7196 4.405036 AGAGCTGCTCAGATGTCTAAATGA 59.595 41.667 29.49 0.00 32.06 2.57
2399 7197 4.440880 AGCTGCTCAGATGTCTAAATGAC 58.559 43.478 0.00 0.00 45.54 3.06
2400 7198 4.161942 AGCTGCTCAGATGTCTAAATGACT 59.838 41.667 0.00 0.00 45.54 3.41
2401 7199 4.874966 GCTGCTCAGATGTCTAAATGACTT 59.125 41.667 0.29 0.00 45.54 3.01
2402 7200 5.220624 GCTGCTCAGATGTCTAAATGACTTG 60.221 44.000 0.29 0.00 45.54 3.16
2403 7201 6.041423 TGCTCAGATGTCTAAATGACTTGA 57.959 37.500 0.00 0.00 45.54 3.02
2404 7202 6.466812 TGCTCAGATGTCTAAATGACTTGAA 58.533 36.000 0.00 0.00 45.54 2.69
2405 7203 6.936335 TGCTCAGATGTCTAAATGACTTGAAA 59.064 34.615 0.00 0.00 45.54 2.69
2406 7204 7.609146 TGCTCAGATGTCTAAATGACTTGAAAT 59.391 33.333 0.00 0.00 45.54 2.17
2407 7205 8.457261 GCTCAGATGTCTAAATGACTTGAAATT 58.543 33.333 0.00 0.00 45.54 1.82
2413 7211 8.801715 TGTCTAAATGACTTGAAATTTGAAGC 57.198 30.769 16.14 10.14 45.54 3.86
2414 7212 7.591057 TGTCTAAATGACTTGAAATTTGAAGCG 59.409 33.333 16.14 0.00 45.54 4.68
2415 7213 7.061094 GTCTAAATGACTTGAAATTTGAAGCGG 59.939 37.037 16.14 0.00 42.21 5.52
2416 7214 3.641437 TGACTTGAAATTTGAAGCGGG 57.359 42.857 16.14 0.00 0.00 6.13
2417 7215 2.288152 TGACTTGAAATTTGAAGCGGGC 60.288 45.455 16.14 5.53 0.00 6.13
2418 7216 1.000843 ACTTGAAATTTGAAGCGGGCC 59.999 47.619 16.14 0.00 0.00 5.80
2419 7217 1.273327 CTTGAAATTTGAAGCGGGCCT 59.727 47.619 0.84 0.00 0.00 5.19
2420 7218 0.887933 TGAAATTTGAAGCGGGCCTC 59.112 50.000 0.84 0.00 0.00 4.70
2421 7219 0.887933 GAAATTTGAAGCGGGCCTCA 59.112 50.000 0.84 0.00 0.00 3.86
2422 7220 0.603065 AAATTTGAAGCGGGCCTCAC 59.397 50.000 0.84 0.00 0.00 3.51
2423 7221 1.250840 AATTTGAAGCGGGCCTCACC 61.251 55.000 0.84 0.00 37.93 4.02
2434 7232 1.560505 GGCCTCACCCATCAAATTGT 58.439 50.000 0.00 0.00 0.00 2.71
2435 7233 1.478105 GGCCTCACCCATCAAATTGTC 59.522 52.381 0.00 0.00 0.00 3.18
2436 7234 2.450476 GCCTCACCCATCAAATTGTCT 58.550 47.619 0.00 0.00 0.00 3.41
2437 7235 3.620488 GCCTCACCCATCAAATTGTCTA 58.380 45.455 0.00 0.00 0.00 2.59
2438 7236 4.210331 GCCTCACCCATCAAATTGTCTAT 58.790 43.478 0.00 0.00 0.00 1.98
2439 7237 4.276926 GCCTCACCCATCAAATTGTCTATC 59.723 45.833 0.00 0.00 0.00 2.08
2440 7238 4.512944 CCTCACCCATCAAATTGTCTATCG 59.487 45.833 0.00 0.00 0.00 2.92
2441 7239 3.876914 TCACCCATCAAATTGTCTATCGC 59.123 43.478 0.00 0.00 0.00 4.58
2442 7240 3.627123 CACCCATCAAATTGTCTATCGCA 59.373 43.478 0.00 0.00 0.00 5.10
2443 7241 4.276678 CACCCATCAAATTGTCTATCGCAT 59.723 41.667 0.00 0.00 0.00 4.73
2444 7242 5.469760 CACCCATCAAATTGTCTATCGCATA 59.530 40.000 0.00 0.00 0.00 3.14
2445 7243 6.017192 CACCCATCAAATTGTCTATCGCATAA 60.017 38.462 0.00 0.00 0.00 1.90
2446 7244 6.545666 ACCCATCAAATTGTCTATCGCATAAA 59.454 34.615 0.00 0.00 0.00 1.40
2447 7245 7.068103 ACCCATCAAATTGTCTATCGCATAAAA 59.932 33.333 0.00 0.00 0.00 1.52
2448 7246 7.920151 CCCATCAAATTGTCTATCGCATAAAAA 59.080 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 2.744741 TCGGCGATGCACTTATTTTCAA 59.255 40.909 4.99 0.00 0.00 2.69
66 67 1.670811 CCTCGGCGATGCACTTATTTT 59.329 47.619 11.27 0.00 0.00 1.82
71 72 4.393155 TGCCTCGGCGATGCACTT 62.393 61.111 31.06 0.00 45.51 3.16
72 73 4.827087 CTGCCTCGGCGATGCACT 62.827 66.667 31.06 0.00 45.51 4.40
125 136 7.744087 ATGCAGACTTAACTGAAAATGTACA 57.256 32.000 0.00 0.00 39.94 2.90
242 253 3.066342 TCGTTCGAAGAGACTTCAAGTGT 59.934 43.478 0.00 0.00 38.43 3.55
243 254 3.422546 GTCGTTCGAAGAGACTTCAAGTG 59.577 47.826 20.30 0.28 38.43 3.16
349 1208 2.083715 GGGTCCTGATCCCAACCAA 58.916 57.895 9.05 0.00 44.05 3.67
480 1339 3.555586 GGGTGTGTGTACGTACCTGATTT 60.556 47.826 22.43 0.00 33.71 2.17
518 1401 6.761099 ATATCGATCAATTAGCGGAGTACT 57.239 37.500 0.00 0.00 37.65 2.73
892 5615 0.390860 CCTTGTAGCGAGGGGATGAG 59.609 60.000 0.00 0.00 31.55 2.90
946 5670 1.012841 CTCTGCCGATTTGCTTCTCC 58.987 55.000 0.00 0.00 0.00 3.71
1107 5837 5.762179 AGCTAGGCAACCATATATAGCAA 57.238 39.130 4.98 0.00 38.43 3.91
1212 5948 3.870538 TTAGCAGATGAATCCCATGCT 57.129 42.857 9.60 9.60 37.94 3.79
1267 6016 9.438228 TGTAAGAGTTAGACGGAGAGATATATG 57.562 37.037 0.00 0.00 0.00 1.78
1280 6031 6.365247 TCTGCAAATCGTTGTAAGAGTTAGAC 59.635 38.462 0.00 0.00 37.06 2.59
1494 6245 0.101219 TCGACCGTGCAGATGAGATG 59.899 55.000 0.00 0.00 0.00 2.90
1495 6246 1.000827 GATCGACCGTGCAGATGAGAT 60.001 52.381 0.00 0.00 0.00 2.75
1496 6247 0.382158 GATCGACCGTGCAGATGAGA 59.618 55.000 0.00 0.00 0.00 3.27
1520 6276 7.025520 AGCTAGCTTGATGGGATATTATTGT 57.974 36.000 12.68 0.00 0.00 2.71
1562 6347 2.481854 GATCGTGCCTCTCGTAGTCTA 58.518 52.381 0.00 0.00 0.00 2.59
1570 6356 3.773860 ATCATATCGATCGTGCCTCTC 57.226 47.619 15.94 0.00 0.00 3.20
1621 6410 9.790389 GATGAGCACAAGGTACATATATAGTAC 57.210 37.037 13.02 13.02 40.78 2.73
1622 6411 8.967918 GGATGAGCACAAGGTACATATATAGTA 58.032 37.037 0.00 0.00 0.00 1.82
1623 6412 7.454694 TGGATGAGCACAAGGTACATATATAGT 59.545 37.037 0.00 0.00 0.00 2.12
1624 6413 7.840931 TGGATGAGCACAAGGTACATATATAG 58.159 38.462 0.00 0.00 0.00 1.31
1625 6414 7.790782 TGGATGAGCACAAGGTACATATATA 57.209 36.000 0.00 0.00 0.00 0.86
1626 6415 6.686484 TGGATGAGCACAAGGTACATATAT 57.314 37.500 0.00 0.00 0.00 0.86
1661 6455 6.668323 GCAAACATATGCTTTATACGATGGT 58.332 36.000 1.58 0.00 43.06 3.55
1674 6468 5.065602 TGAGAATGAGACAGCAAACATATGC 59.934 40.000 1.58 0.00 46.78 3.14
1687 6481 2.354109 TGCGTGAGTGAGAATGAGAC 57.646 50.000 0.00 0.00 0.00 3.36
1703 6497 0.371989 TCACGGCAATTACGAATGCG 59.628 50.000 8.49 0.00 43.47 4.73
1727 6521 4.828829 ACGCACCAGTAATTTTAGTAGCT 58.171 39.130 0.00 0.00 0.00 3.32
1728 6522 6.257193 ACATACGCACCAGTAATTTTAGTAGC 59.743 38.462 0.00 0.00 0.00 3.58
1738 6536 5.522097 CACATATGAACATACGCACCAGTAA 59.478 40.000 10.38 0.00 0.00 2.24
1739 6537 5.047188 CACATATGAACATACGCACCAGTA 58.953 41.667 10.38 0.00 0.00 2.74
1741 6539 3.303329 GCACATATGAACATACGCACCAG 60.303 47.826 10.38 0.00 0.00 4.00
1775 6573 1.653609 GATCGCATACATAATCGCGCA 59.346 47.619 8.75 0.00 46.95 6.09
1778 6576 3.481951 CGGTTGATCGCATACATAATCGC 60.482 47.826 0.00 0.00 0.00 4.58
1779 6577 3.673338 ACGGTTGATCGCATACATAATCG 59.327 43.478 0.00 0.00 0.00 3.34
1780 6578 6.887376 ATACGGTTGATCGCATACATAATC 57.113 37.500 0.00 0.00 0.00 1.75
1781 6579 7.438160 CCATATACGGTTGATCGCATACATAAT 59.562 37.037 0.00 0.00 0.00 1.28
1782 6580 6.754675 CCATATACGGTTGATCGCATACATAA 59.245 38.462 0.00 0.00 0.00 1.90
1783 6581 6.095720 TCCATATACGGTTGATCGCATACATA 59.904 38.462 0.00 0.00 0.00 2.29
1784 6582 5.105513 TCCATATACGGTTGATCGCATACAT 60.106 40.000 0.00 0.00 0.00 2.29
1785 6583 4.218852 TCCATATACGGTTGATCGCATACA 59.781 41.667 0.00 0.00 0.00 2.29
1786 6584 4.740268 TCCATATACGGTTGATCGCATAC 58.260 43.478 0.00 0.00 0.00 2.39
1791 6589 3.367087 GGTCCTCCATATACGGTTGATCG 60.367 52.174 0.00 0.00 0.00 3.69
1793 6591 2.904434 GGGTCCTCCATATACGGTTGAT 59.096 50.000 0.00 0.00 35.00 2.57
1798 6596 2.304221 TCAGGGTCCTCCATATACGG 57.696 55.000 0.00 0.00 38.24 4.02
1813 6611 1.210234 TCATGTGTAGCACCCATCAGG 59.790 52.381 0.00 0.00 43.78 3.86
1814 6612 2.696989 TCATGTGTAGCACCCATCAG 57.303 50.000 0.00 0.00 32.73 2.90
1815 6613 4.164030 AGTTATCATGTGTAGCACCCATCA 59.836 41.667 0.00 0.00 32.73 3.07
1816 6614 4.708177 AGTTATCATGTGTAGCACCCATC 58.292 43.478 0.00 0.00 32.73 3.51
1817 6615 4.444876 GGAGTTATCATGTGTAGCACCCAT 60.445 45.833 0.00 0.00 32.73 4.00
1818 6616 3.118408 GGAGTTATCATGTGTAGCACCCA 60.118 47.826 0.00 0.00 32.73 4.51
1819 6617 3.467803 GGAGTTATCATGTGTAGCACCC 58.532 50.000 0.00 0.00 32.73 4.61
1820 6618 3.123804 CGGAGTTATCATGTGTAGCACC 58.876 50.000 0.00 0.00 32.73 5.01
1821 6619 4.041740 TCGGAGTTATCATGTGTAGCAC 57.958 45.455 0.00 0.00 34.56 4.40
1822 6620 4.430007 GTTCGGAGTTATCATGTGTAGCA 58.570 43.478 0.00 0.00 0.00 3.49
1823 6621 3.486108 CGTTCGGAGTTATCATGTGTAGC 59.514 47.826 0.00 0.00 0.00 3.58
1824 6622 4.669318 ACGTTCGGAGTTATCATGTGTAG 58.331 43.478 0.00 0.00 0.00 2.74
1825 6623 4.707030 ACGTTCGGAGTTATCATGTGTA 57.293 40.909 0.00 0.00 0.00 2.90
1826 6624 3.587797 ACGTTCGGAGTTATCATGTGT 57.412 42.857 0.00 0.00 0.00 3.72
1827 6625 6.583912 AAATACGTTCGGAGTTATCATGTG 57.416 37.500 0.00 0.00 0.00 3.21
1828 6626 8.882415 ATAAAATACGTTCGGAGTTATCATGT 57.118 30.769 0.00 0.00 0.00 3.21
1835 6633 9.860898 AACTTACTATAAAATACGTTCGGAGTT 57.139 29.630 0.00 0.00 0.00 3.01
1836 6634 9.860898 AAACTTACTATAAAATACGTTCGGAGT 57.139 29.630 0.00 0.00 0.00 3.85
1847 6645 8.915871 TCGCGTCACTAAACTTACTATAAAAT 57.084 30.769 5.77 0.00 0.00 1.82
1848 6646 7.008628 GCTCGCGTCACTAAACTTACTATAAAA 59.991 37.037 5.77 0.00 0.00 1.52
1849 6647 6.470235 GCTCGCGTCACTAAACTTACTATAAA 59.530 38.462 5.77 0.00 0.00 1.40
1850 6648 5.967674 GCTCGCGTCACTAAACTTACTATAA 59.032 40.000 5.77 0.00 0.00 0.98
1851 6649 5.065090 TGCTCGCGTCACTAAACTTACTATA 59.935 40.000 5.77 0.00 0.00 1.31
1852 6650 4.142534 TGCTCGCGTCACTAAACTTACTAT 60.143 41.667 5.77 0.00 0.00 2.12
1853 6651 3.189080 TGCTCGCGTCACTAAACTTACTA 59.811 43.478 5.77 0.00 0.00 1.82
1854 6652 2.030540 TGCTCGCGTCACTAAACTTACT 60.031 45.455 5.77 0.00 0.00 2.24
1855 6653 2.322161 TGCTCGCGTCACTAAACTTAC 58.678 47.619 5.77 0.00 0.00 2.34
1856 6654 2.710220 TGCTCGCGTCACTAAACTTA 57.290 45.000 5.77 0.00 0.00 2.24
1857 6655 1.726791 CATGCTCGCGTCACTAAACTT 59.273 47.619 5.77 0.00 0.00 2.66
1858 6656 1.067846 TCATGCTCGCGTCACTAAACT 60.068 47.619 5.77 0.00 0.00 2.66
1859 6657 1.059264 GTCATGCTCGCGTCACTAAAC 59.941 52.381 5.77 0.00 0.00 2.01
1860 6658 1.336424 TGTCATGCTCGCGTCACTAAA 60.336 47.619 5.77 0.00 0.00 1.85
1861 6659 0.242555 TGTCATGCTCGCGTCACTAA 59.757 50.000 5.77 0.00 0.00 2.24
1862 6660 0.242555 TTGTCATGCTCGCGTCACTA 59.757 50.000 5.77 0.00 0.00 2.74
1863 6661 1.006220 TTGTCATGCTCGCGTCACT 60.006 52.632 5.77 0.00 0.00 3.41
1864 6662 1.130613 GTTGTCATGCTCGCGTCAC 59.869 57.895 5.77 0.00 0.00 3.67
1865 6663 0.599991 AAGTTGTCATGCTCGCGTCA 60.600 50.000 5.77 6.10 0.00 4.35
1866 6664 0.512952 AAAGTTGTCATGCTCGCGTC 59.487 50.000 5.77 0.00 0.00 5.19
1867 6665 1.459592 GTAAAGTTGTCATGCTCGCGT 59.540 47.619 5.77 0.00 0.00 6.01
1868 6666 1.726791 AGTAAAGTTGTCATGCTCGCG 59.273 47.619 0.00 0.00 0.00 5.87
1869 6667 3.058914 ACAAGTAAAGTTGTCATGCTCGC 60.059 43.478 0.00 0.00 35.71 5.03
1870 6668 4.732285 ACAAGTAAAGTTGTCATGCTCG 57.268 40.909 0.00 0.00 35.71 5.03
1878 6676 4.523083 TCAGGCTTGACAAGTAAAGTTGT 58.477 39.130 16.39 2.86 43.49 3.32
1891 6689 5.184864 TGAAAAAGAAAGTTGTCAGGCTTGA 59.815 36.000 0.00 0.00 0.00 3.02
1892 6690 5.410067 TGAAAAAGAAAGTTGTCAGGCTTG 58.590 37.500 0.00 0.00 0.00 4.01
1893 6691 5.659440 TGAAAAAGAAAGTTGTCAGGCTT 57.341 34.783 0.00 0.00 0.00 4.35
1894 6692 5.659440 TTGAAAAAGAAAGTTGTCAGGCT 57.341 34.783 0.00 0.00 0.00 4.58
1895 6693 5.812127 ACATTGAAAAAGAAAGTTGTCAGGC 59.188 36.000 0.00 0.00 0.00 4.85
1896 6694 7.035004 TGACATTGAAAAAGAAAGTTGTCAGG 58.965 34.615 0.00 0.00 37.79 3.86
1897 6695 8.464770 TTGACATTGAAAAAGAAAGTTGTCAG 57.535 30.769 0.00 0.00 42.00 3.51
1898 6696 8.087750 ACTTGACATTGAAAAAGAAAGTTGTCA 58.912 29.630 0.00 0.00 40.11 3.58
1899 6697 8.466086 ACTTGACATTGAAAAAGAAAGTTGTC 57.534 30.769 0.00 0.00 34.33 3.18
1900 6698 8.831715 AACTTGACATTGAAAAAGAAAGTTGT 57.168 26.923 0.00 0.00 35.44 3.32
1901 6699 9.745323 GAAACTTGACATTGAAAAAGAAAGTTG 57.255 29.630 0.00 0.00 36.19 3.16
1902 6700 9.487790 TGAAACTTGACATTGAAAAAGAAAGTT 57.512 25.926 0.00 0.00 36.93 2.66
1903 6701 9.657419 ATGAAACTTGACATTGAAAAAGAAAGT 57.343 25.926 0.00 0.00 30.62 2.66
1969 6767 7.596248 GCATTGACAATGACATTTTCTACAACT 59.404 33.333 28.37 0.00 41.46 3.16
1970 6768 7.596248 AGCATTGACAATGACATTTTCTACAAC 59.404 33.333 28.37 8.12 41.46 3.32
1971 6769 7.660112 AGCATTGACAATGACATTTTCTACAA 58.340 30.769 28.37 9.19 41.46 2.41
1972 6770 7.218228 AGCATTGACAATGACATTTTCTACA 57.782 32.000 28.37 1.39 41.46 2.74
1973 6771 8.430063 CAAAGCATTGACAATGACATTTTCTAC 58.570 33.333 28.37 9.14 41.46 2.59
1974 6772 8.143193 ACAAAGCATTGACAATGACATTTTCTA 58.857 29.630 28.37 8.07 41.46 2.10
1975 6773 6.987992 ACAAAGCATTGACAATGACATTTTCT 59.012 30.769 28.37 12.96 41.46 2.52
1976 6774 7.067116 CACAAAGCATTGACAATGACATTTTC 58.933 34.615 28.37 11.07 41.46 2.29
1977 6775 6.539464 ACACAAAGCATTGACAATGACATTTT 59.461 30.769 28.37 18.43 41.46 1.82
1978 6776 6.050432 ACACAAAGCATTGACAATGACATTT 58.950 32.000 28.37 20.77 41.46 2.32
1979 6777 5.603596 ACACAAAGCATTGACAATGACATT 58.396 33.333 28.37 16.95 41.46 2.71
1980 6778 5.204409 ACACAAAGCATTGACAATGACAT 57.796 34.783 28.37 12.51 41.46 3.06
1981 6779 4.097589 TGACACAAAGCATTGACAATGACA 59.902 37.500 28.37 7.85 41.46 3.58
1982 6780 4.442073 GTGACACAAAGCATTGACAATGAC 59.558 41.667 28.37 19.44 41.46 3.06
1983 6781 4.097589 TGTGACACAAAGCATTGACAATGA 59.902 37.500 28.37 4.55 41.46 2.57
1984 6782 4.207635 GTGTGACACAAAGCATTGACAATG 59.792 41.667 21.56 21.56 38.94 2.82
1985 6783 4.362279 GTGTGACACAAAGCATTGACAAT 58.638 39.130 10.50 0.00 38.94 2.71
1986 6784 3.730362 CGTGTGACACAAAGCATTGACAA 60.730 43.478 16.74 0.00 38.94 3.18
1987 6785 2.223226 CGTGTGACACAAAGCATTGACA 60.223 45.455 16.74 0.00 38.94 3.58
1988 6786 2.223249 ACGTGTGACACAAAGCATTGAC 60.223 45.455 16.74 0.00 38.94 3.18
1989 6787 2.013400 ACGTGTGACACAAAGCATTGA 58.987 42.857 16.74 0.00 38.94 2.57
1990 6788 2.110990 CACGTGTGACACAAAGCATTG 58.889 47.619 16.74 0.00 42.46 2.82
1991 6789 2.013400 TCACGTGTGACACAAAGCATT 58.987 42.857 16.74 0.00 34.14 3.56
1992 6790 1.662517 TCACGTGTGACACAAAGCAT 58.337 45.000 16.74 0.00 34.14 3.79
1993 6791 1.662517 ATCACGTGTGACACAAAGCA 58.337 45.000 16.74 0.00 43.11 3.91
1994 6792 2.800544 AGTATCACGTGTGACACAAAGC 59.199 45.455 16.74 0.00 39.34 3.51
1995 6793 6.364976 TGATAAGTATCACGTGTGACACAAAG 59.635 38.462 16.74 10.13 39.34 2.77
1996 6794 6.217294 TGATAAGTATCACGTGTGACACAAA 58.783 36.000 16.74 0.19 39.34 2.83
1997 6795 5.774630 TGATAAGTATCACGTGTGACACAA 58.225 37.500 16.74 0.58 39.34 3.33
1998 6796 5.379732 TGATAAGTATCACGTGTGACACA 57.620 39.130 16.74 3.56 39.34 3.72
1999 6797 6.887376 AATGATAAGTATCACGTGTGACAC 57.113 37.500 16.51 5.47 44.66 3.67
2000 6798 6.312672 CCAAATGATAAGTATCACGTGTGACA 59.687 38.462 16.51 6.44 44.66 3.58
2001 6799 6.238103 CCCAAATGATAAGTATCACGTGTGAC 60.238 42.308 16.51 14.26 44.66 3.67
2002 6800 5.815222 CCCAAATGATAAGTATCACGTGTGA 59.185 40.000 16.51 4.99 44.66 3.58
2003 6801 5.584649 ACCCAAATGATAAGTATCACGTGTG 59.415 40.000 16.51 1.09 44.66 3.82
2004 6802 5.741011 ACCCAAATGATAAGTATCACGTGT 58.259 37.500 16.51 5.66 44.66 4.49
2005 6803 7.962964 ATACCCAAATGATAAGTATCACGTG 57.037 36.000 9.94 9.94 44.66 4.49
2012 6810 9.947433 CCGGTTAATATACCCAAATGATAAGTA 57.053 33.333 0.00 0.00 34.56 2.24
2013 6811 8.442374 ACCGGTTAATATACCCAAATGATAAGT 58.558 33.333 0.00 0.00 34.56 2.24
2014 6812 8.726988 CACCGGTTAATATACCCAAATGATAAG 58.273 37.037 2.97 0.00 34.56 1.73
2015 6813 8.219178 ACACCGGTTAATATACCCAAATGATAA 58.781 33.333 2.97 0.00 34.56 1.75
2016 6814 7.747690 ACACCGGTTAATATACCCAAATGATA 58.252 34.615 2.97 0.00 34.56 2.15
2017 6815 6.607019 ACACCGGTTAATATACCCAAATGAT 58.393 36.000 2.97 0.00 34.56 2.45
2018 6816 6.003859 ACACCGGTTAATATACCCAAATGA 57.996 37.500 2.97 0.00 34.56 2.57
2019 6817 6.500041 CAACACCGGTTAATATACCCAAATG 58.500 40.000 2.97 0.00 34.87 2.32
2020 6818 5.068067 GCAACACCGGTTAATATACCCAAAT 59.932 40.000 2.97 0.00 34.87 2.32
2021 6819 4.398673 GCAACACCGGTTAATATACCCAAA 59.601 41.667 2.97 0.00 34.87 3.28
2022 6820 3.946558 GCAACACCGGTTAATATACCCAA 59.053 43.478 2.97 0.00 34.87 4.12
2023 6821 3.200385 AGCAACACCGGTTAATATACCCA 59.800 43.478 2.97 0.00 34.87 4.51
2024 6822 3.812262 AGCAACACCGGTTAATATACCC 58.188 45.455 2.97 0.00 34.87 3.69
2025 6823 5.007332 CAGAAGCAACACCGGTTAATATACC 59.993 44.000 2.97 0.00 34.87 2.73
2026 6824 5.583457 ACAGAAGCAACACCGGTTAATATAC 59.417 40.000 2.97 0.00 34.87 1.47
2027 6825 5.583061 CACAGAAGCAACACCGGTTAATATA 59.417 40.000 2.97 0.00 34.87 0.86
2028 6826 4.394920 CACAGAAGCAACACCGGTTAATAT 59.605 41.667 2.97 0.00 34.87 1.28
2029 6827 3.749088 CACAGAAGCAACACCGGTTAATA 59.251 43.478 2.97 0.00 34.87 0.98
2030 6828 2.552315 CACAGAAGCAACACCGGTTAAT 59.448 45.455 2.97 0.00 34.87 1.40
2031 6829 1.944024 CACAGAAGCAACACCGGTTAA 59.056 47.619 2.97 0.00 34.87 2.01
2032 6830 1.588674 CACAGAAGCAACACCGGTTA 58.411 50.000 2.97 0.00 34.87 2.85
2033 6831 1.101049 CCACAGAAGCAACACCGGTT 61.101 55.000 2.97 0.00 37.87 4.44
2034 6832 1.525995 CCACAGAAGCAACACCGGT 60.526 57.895 0.00 0.00 0.00 5.28
2035 6833 1.507141 GACCACAGAAGCAACACCGG 61.507 60.000 0.00 0.00 0.00 5.28
2036 6834 0.532862 AGACCACAGAAGCAACACCG 60.533 55.000 0.00 0.00 0.00 4.94
2037 6835 1.680338 AAGACCACAGAAGCAACACC 58.320 50.000 0.00 0.00 0.00 4.16
2038 6836 3.782889 AAAAGACCACAGAAGCAACAC 57.217 42.857 0.00 0.00 0.00 3.32
2073 6871 2.267324 GAGTCTCCCTGCACCTGC 59.733 66.667 0.00 0.00 42.50 4.85
2074 6872 1.611851 AGGAGTCTCCCTGCACCTG 60.612 63.158 15.72 0.00 37.19 4.00
2075 6873 1.611851 CAGGAGTCTCCCTGCACCT 60.612 63.158 15.72 0.00 46.16 4.00
2076 6874 2.985456 CAGGAGTCTCCCTGCACC 59.015 66.667 15.72 0.00 46.16 5.01
2081 6879 0.032615 CACCTAGCAGGAGTCTCCCT 60.033 60.000 15.72 8.93 37.67 4.20
2082 6880 1.045911 CCACCTAGCAGGAGTCTCCC 61.046 65.000 15.72 0.93 37.67 4.30
2083 6881 1.681486 GCCACCTAGCAGGAGTCTCC 61.681 65.000 11.31 11.31 37.67 3.71
2084 6882 0.972983 TGCCACCTAGCAGGAGTCTC 60.973 60.000 8.91 0.00 37.67 3.36
2085 6883 0.545309 TTGCCACCTAGCAGGAGTCT 60.545 55.000 8.91 0.00 45.13 3.24
2086 6884 0.324943 TTTGCCACCTAGCAGGAGTC 59.675 55.000 8.91 0.00 45.13 3.36
2087 6885 0.326264 CTTTGCCACCTAGCAGGAGT 59.674 55.000 8.91 0.00 45.13 3.85
2088 6886 0.326264 ACTTTGCCACCTAGCAGGAG 59.674 55.000 8.91 1.68 45.13 3.69
2089 6887 1.555075 CTACTTTGCCACCTAGCAGGA 59.445 52.381 8.91 0.00 45.13 3.86
2090 6888 2.014068 GCTACTTTGCCACCTAGCAGG 61.014 57.143 1.16 1.16 45.13 4.85
2091 6889 1.339055 TGCTACTTTGCCACCTAGCAG 60.339 52.381 0.00 0.00 45.13 4.24
2092 6890 0.690192 TGCTACTTTGCCACCTAGCA 59.310 50.000 0.00 0.00 39.39 3.49
2093 6891 1.821216 TTGCTACTTTGCCACCTAGC 58.179 50.000 0.00 0.00 33.56 3.42
2094 6892 5.409826 GCTATATTGCTACTTTGCCACCTAG 59.590 44.000 1.60 0.00 0.00 3.02
2095 6893 5.071788 AGCTATATTGCTACTTTGCCACCTA 59.928 40.000 10.06 0.00 42.10 3.08
2096 6894 4.137543 GCTATATTGCTACTTTGCCACCT 58.862 43.478 1.60 0.00 0.00 4.00
2097 6895 4.137543 AGCTATATTGCTACTTTGCCACC 58.862 43.478 10.06 0.00 42.10 4.61
2098 6896 6.128172 CCATAGCTATATTGCTACTTTGCCAC 60.128 42.308 19.07 0.00 46.60 5.01
2099 6897 5.939883 CCATAGCTATATTGCTACTTTGCCA 59.060 40.000 19.07 0.00 46.60 4.92
2100 6898 5.163713 GCCATAGCTATATTGCTACTTTGCC 60.164 44.000 19.07 2.93 46.60 4.52
2101 6899 5.412594 TGCCATAGCTATATTGCTACTTTGC 59.587 40.000 19.07 17.57 46.60 3.68
2102 6900 6.401474 CGTGCCATAGCTATATTGCTACTTTG 60.401 42.308 19.07 13.90 46.60 2.77
2103 6901 5.639506 CGTGCCATAGCTATATTGCTACTTT 59.360 40.000 19.07 3.40 46.60 2.66
2104 6902 5.047306 TCGTGCCATAGCTATATTGCTACTT 60.047 40.000 19.07 4.06 46.60 2.24
2105 6903 4.462834 TCGTGCCATAGCTATATTGCTACT 59.537 41.667 19.07 7.82 46.60 2.57
2106 6904 4.563184 GTCGTGCCATAGCTATATTGCTAC 59.437 45.833 19.07 9.39 46.60 3.58
2108 6906 3.259374 AGTCGTGCCATAGCTATATTGCT 59.741 43.478 15.89 15.89 46.11 3.91
2109 6907 3.369147 CAGTCGTGCCATAGCTATATTGC 59.631 47.826 5.77 10.13 40.80 3.56
2110 6908 4.809673 TCAGTCGTGCCATAGCTATATTG 58.190 43.478 5.77 0.00 40.80 1.90
2111 6909 5.468540 TTCAGTCGTGCCATAGCTATATT 57.531 39.130 5.77 0.00 40.80 1.28
2112 6910 5.468540 TTTCAGTCGTGCCATAGCTATAT 57.531 39.130 5.77 0.00 40.80 0.86
2113 6911 4.929819 TTTCAGTCGTGCCATAGCTATA 57.070 40.909 5.77 0.00 40.80 1.31
2114 6912 3.819564 TTTCAGTCGTGCCATAGCTAT 57.180 42.857 0.00 0.00 40.80 2.97
2115 6913 3.603158 TTTTCAGTCGTGCCATAGCTA 57.397 42.857 0.00 0.00 40.80 3.32
2116 6914 2.472695 TTTTCAGTCGTGCCATAGCT 57.527 45.000 0.00 0.00 40.80 3.32
2117 6915 2.032178 GGATTTTCAGTCGTGCCATAGC 59.968 50.000 0.00 0.00 40.48 2.97
2118 6916 3.270027 TGGATTTTCAGTCGTGCCATAG 58.730 45.455 0.00 0.00 0.00 2.23
2119 6917 3.342377 TGGATTTTCAGTCGTGCCATA 57.658 42.857 0.00 0.00 0.00 2.74
2120 6918 2.198827 TGGATTTTCAGTCGTGCCAT 57.801 45.000 0.00 0.00 0.00 4.40
2121 6919 2.083774 GATGGATTTTCAGTCGTGCCA 58.916 47.619 0.00 0.00 0.00 4.92
2122 6920 2.352960 GAGATGGATTTTCAGTCGTGCC 59.647 50.000 0.00 0.00 0.00 5.01
2123 6921 3.063180 CAGAGATGGATTTTCAGTCGTGC 59.937 47.826 0.00 0.00 0.00 5.34
2124 6922 3.063180 GCAGAGATGGATTTTCAGTCGTG 59.937 47.826 0.00 0.00 0.00 4.35
2125 6923 3.265791 GCAGAGATGGATTTTCAGTCGT 58.734 45.455 0.00 0.00 0.00 4.34
2126 6924 3.063180 GTGCAGAGATGGATTTTCAGTCG 59.937 47.826 0.00 0.00 0.00 4.18
2127 6925 3.376546 GGTGCAGAGATGGATTTTCAGTC 59.623 47.826 0.00 0.00 0.00 3.51
2128 6926 3.350833 GGTGCAGAGATGGATTTTCAGT 58.649 45.455 0.00 0.00 0.00 3.41
2129 6927 2.686915 GGGTGCAGAGATGGATTTTCAG 59.313 50.000 0.00 0.00 0.00 3.02
2130 6928 2.726821 GGGTGCAGAGATGGATTTTCA 58.273 47.619 0.00 0.00 0.00 2.69
2131 6929 1.672881 CGGGTGCAGAGATGGATTTTC 59.327 52.381 0.00 0.00 0.00 2.29
2132 6930 1.281867 TCGGGTGCAGAGATGGATTTT 59.718 47.619 0.00 0.00 0.00 1.82
2133 6931 0.911769 TCGGGTGCAGAGATGGATTT 59.088 50.000 0.00 0.00 0.00 2.17
2134 6932 0.467384 CTCGGGTGCAGAGATGGATT 59.533 55.000 0.00 0.00 37.93 3.01
2135 6933 2.037620 GCTCGGGTGCAGAGATGGAT 62.038 60.000 5.67 0.00 37.93 3.41
2136 6934 2.725312 GCTCGGGTGCAGAGATGGA 61.725 63.158 5.67 0.00 37.93 3.41
2137 6935 2.202987 GCTCGGGTGCAGAGATGG 60.203 66.667 5.67 0.00 37.93 3.51
2138 6936 1.227205 GAGCTCGGGTGCAGAGATG 60.227 63.158 0.00 0.00 37.93 2.90
2139 6937 1.047596 ATGAGCTCGGGTGCAGAGAT 61.048 55.000 9.64 0.00 37.93 2.75
2140 6938 1.670949 GATGAGCTCGGGTGCAGAGA 61.671 60.000 9.64 0.00 37.93 3.10
2141 6939 1.227205 GATGAGCTCGGGTGCAGAG 60.227 63.158 9.64 0.00 38.68 3.35
2142 6940 1.683707 AGATGAGCTCGGGTGCAGA 60.684 57.895 9.64 0.00 34.99 4.26
2143 6941 1.521010 CAGATGAGCTCGGGTGCAG 60.521 63.158 9.64 0.00 34.99 4.41
2144 6942 2.580815 CAGATGAGCTCGGGTGCA 59.419 61.111 9.64 0.00 34.99 4.57
2145 6943 2.894387 GCAGATGAGCTCGGGTGC 60.894 66.667 15.62 15.62 0.00 5.01
2146 6944 1.812922 GTGCAGATGAGCTCGGGTG 60.813 63.158 9.64 6.93 34.99 4.61
2147 6945 2.581354 GTGCAGATGAGCTCGGGT 59.419 61.111 9.64 0.00 34.99 5.28
2148 6946 2.202987 GGTGCAGATGAGCTCGGG 60.203 66.667 9.64 0.00 34.99 5.14
2149 6947 1.521010 CAGGTGCAGATGAGCTCGG 60.521 63.158 9.64 0.00 34.99 4.63
2150 6948 2.172372 GCAGGTGCAGATGAGCTCG 61.172 63.158 9.64 0.00 41.59 5.03
2151 6949 1.818785 GGCAGGTGCAGATGAGCTC 60.819 63.158 6.82 6.82 44.36 4.09
2152 6950 2.271497 GGCAGGTGCAGATGAGCT 59.729 61.111 4.01 0.00 44.36 4.09
2153 6951 2.827642 GGGCAGGTGCAGATGAGC 60.828 66.667 4.01 0.00 44.36 4.26
2154 6952 1.451567 CAGGGCAGGTGCAGATGAG 60.452 63.158 4.01 0.00 44.36 2.90
2155 6953 1.276859 ATCAGGGCAGGTGCAGATGA 61.277 55.000 4.01 5.03 44.36 2.92
2156 6954 1.101635 CATCAGGGCAGGTGCAGATG 61.102 60.000 13.37 13.37 44.36 2.90
2157 6955 1.226542 CATCAGGGCAGGTGCAGAT 59.773 57.895 4.01 1.52 44.36 2.90
2158 6956 1.491274 TTCATCAGGGCAGGTGCAGA 61.491 55.000 4.01 0.00 44.36 4.26
2159 6957 0.609957 TTTCATCAGGGCAGGTGCAG 60.610 55.000 4.01 0.00 44.36 4.41
2160 6958 0.178967 TTTTCATCAGGGCAGGTGCA 60.179 50.000 4.01 0.00 44.36 4.57
2161 6959 0.968405 TTTTTCATCAGGGCAGGTGC 59.032 50.000 0.00 0.00 41.14 5.01
2219 7017 8.284693 GCATCAAATTGTCTAAAGCACATTTTT 58.715 29.630 0.00 0.00 29.20 1.94
2220 7018 7.359431 CGCATCAAATTGTCTAAAGCACATTTT 60.359 33.333 0.00 0.00 30.90 1.82
2221 7019 6.089820 CGCATCAAATTGTCTAAAGCACATTT 59.910 34.615 0.00 0.00 34.72 2.32
2222 7020 5.574055 CGCATCAAATTGTCTAAAGCACATT 59.426 36.000 0.00 0.00 0.00 2.71
2223 7021 5.097529 CGCATCAAATTGTCTAAAGCACAT 58.902 37.500 0.00 0.00 0.00 3.21
2224 7022 4.023279 ACGCATCAAATTGTCTAAAGCACA 60.023 37.500 0.00 0.00 0.00 4.57
2225 7023 4.321745 CACGCATCAAATTGTCTAAAGCAC 59.678 41.667 0.00 0.00 0.00 4.40
2226 7024 4.215185 TCACGCATCAAATTGTCTAAAGCA 59.785 37.500 0.00 0.00 0.00 3.91
2227 7025 4.722194 TCACGCATCAAATTGTCTAAAGC 58.278 39.130 0.00 0.00 0.00 3.51
2228 7026 5.106555 ACCTCACGCATCAAATTGTCTAAAG 60.107 40.000 0.00 0.00 0.00 1.85
2229 7027 4.759693 ACCTCACGCATCAAATTGTCTAAA 59.240 37.500 0.00 0.00 0.00 1.85
2230 7028 4.323417 ACCTCACGCATCAAATTGTCTAA 58.677 39.130 0.00 0.00 0.00 2.10
2231 7029 3.932710 GACCTCACGCATCAAATTGTCTA 59.067 43.478 0.00 0.00 0.00 2.59
2232 7030 2.744202 GACCTCACGCATCAAATTGTCT 59.256 45.455 0.00 0.00 0.00 3.41
2233 7031 2.159517 GGACCTCACGCATCAAATTGTC 60.160 50.000 0.00 0.00 0.00 3.18
2234 7032 1.812571 GGACCTCACGCATCAAATTGT 59.187 47.619 0.00 0.00 0.00 2.71
2235 7033 1.202065 CGGACCTCACGCATCAAATTG 60.202 52.381 0.00 0.00 0.00 2.32
2236 7034 1.086696 CGGACCTCACGCATCAAATT 58.913 50.000 0.00 0.00 0.00 1.82
2237 7035 0.036388 ACGGACCTCACGCATCAAAT 60.036 50.000 0.00 0.00 34.00 2.32
2238 7036 0.250124 AACGGACCTCACGCATCAAA 60.250 50.000 0.00 0.00 34.00 2.69
2239 7037 0.250124 AAACGGACCTCACGCATCAA 60.250 50.000 0.00 0.00 34.00 2.57
2240 7038 0.669318 GAAACGGACCTCACGCATCA 60.669 55.000 0.00 0.00 34.00 3.07
2241 7039 0.669318 TGAAACGGACCTCACGCATC 60.669 55.000 0.00 0.00 34.00 3.91
2242 7040 0.250124 TTGAAACGGACCTCACGCAT 60.250 50.000 0.00 0.00 34.00 4.73
2243 7041 0.250124 ATTGAAACGGACCTCACGCA 60.250 50.000 0.00 0.00 34.00 5.24
2244 7042 0.872388 AATTGAAACGGACCTCACGC 59.128 50.000 0.00 0.00 34.00 5.34
2245 7043 3.002862 TGAAAATTGAAACGGACCTCACG 59.997 43.478 0.00 0.00 37.36 4.35
2246 7044 4.561735 TGAAAATTGAAACGGACCTCAC 57.438 40.909 0.00 0.00 0.00 3.51
2247 7045 5.584253 TTTGAAAATTGAAACGGACCTCA 57.416 34.783 0.00 0.00 0.00 3.86
2248 7046 6.212955 TGATTTGAAAATTGAAACGGACCTC 58.787 36.000 0.00 0.00 0.00 3.85
2249 7047 6.155475 TGATTTGAAAATTGAAACGGACCT 57.845 33.333 0.00 0.00 0.00 3.85
2250 7048 7.420184 AATGATTTGAAAATTGAAACGGACC 57.580 32.000 0.00 0.00 0.00 4.46
2251 7049 7.798052 CCAAATGATTTGAAAATTGAAACGGAC 59.202 33.333 18.82 0.00 43.26 4.79
2252 7050 7.712639 TCCAAATGATTTGAAAATTGAAACGGA 59.287 29.630 18.82 0.53 43.26 4.69
2253 7051 7.798052 GTCCAAATGATTTGAAAATTGAAACGG 59.202 33.333 18.82 0.00 43.26 4.44
2254 7052 8.333908 TGTCCAAATGATTTGAAAATTGAAACG 58.666 29.630 18.82 0.00 43.26 3.60
2257 7055 9.781633 AGATGTCCAAATGATTTGAAAATTGAA 57.218 25.926 18.82 0.07 43.26 2.69
2261 7059 9.880157 CCTTAGATGTCCAAATGATTTGAAAAT 57.120 29.630 18.82 0.00 43.26 1.82
2262 7060 9.087871 TCCTTAGATGTCCAAATGATTTGAAAA 57.912 29.630 18.82 0.00 43.26 2.29
2263 7061 8.648698 TCCTTAGATGTCCAAATGATTTGAAA 57.351 30.769 18.82 4.37 43.26 2.69
2264 7062 8.827832 ATCCTTAGATGTCCAAATGATTTGAA 57.172 30.769 18.82 0.00 43.26 2.69
2265 7063 8.277197 AGATCCTTAGATGTCCAAATGATTTGA 58.723 33.333 18.82 0.00 36.37 2.69
2266 7064 8.461249 AGATCCTTAGATGTCCAAATGATTTG 57.539 34.615 10.84 10.84 35.02 2.32
2267 7065 8.501070 AGAGATCCTTAGATGTCCAAATGATTT 58.499 33.333 0.00 0.00 42.45 2.17
2268 7066 8.043429 AGAGATCCTTAGATGTCCAAATGATT 57.957 34.615 0.00 0.00 42.45 2.57
2269 7067 7.291885 TGAGAGATCCTTAGATGTCCAAATGAT 59.708 37.037 0.00 0.00 42.45 2.45
2270 7068 6.612863 TGAGAGATCCTTAGATGTCCAAATGA 59.387 38.462 0.00 0.00 42.45 2.57
2271 7069 6.824553 TGAGAGATCCTTAGATGTCCAAATG 58.175 40.000 0.00 0.00 42.45 2.32
2272 7070 6.464180 GCTGAGAGATCCTTAGATGTCCAAAT 60.464 42.308 7.04 0.00 42.45 2.32
2273 7071 5.163364 GCTGAGAGATCCTTAGATGTCCAAA 60.163 44.000 7.04 0.00 42.45 3.28
2274 7072 4.343526 GCTGAGAGATCCTTAGATGTCCAA 59.656 45.833 7.04 0.00 42.45 3.53
2275 7073 3.894427 GCTGAGAGATCCTTAGATGTCCA 59.106 47.826 7.04 0.00 42.45 4.02
2276 7074 3.894427 TGCTGAGAGATCCTTAGATGTCC 59.106 47.826 7.04 0.00 42.45 4.02
2277 7075 5.528043 TTGCTGAGAGATCCTTAGATGTC 57.472 43.478 7.04 0.00 41.92 3.06
2278 7076 5.946942 TTTGCTGAGAGATCCTTAGATGT 57.053 39.130 7.04 0.00 30.62 3.06
2299 7097 8.499288 TTTACAGACCCCCAATTTATCTTTTT 57.501 30.769 0.00 0.00 0.00 1.94
2300 7098 8.499288 TTTTACAGACCCCCAATTTATCTTTT 57.501 30.769 0.00 0.00 0.00 2.27
2301 7099 8.499288 TTTTTACAGACCCCCAATTTATCTTT 57.501 30.769 0.00 0.00 0.00 2.52
2302 7100 8.679344 ATTTTTACAGACCCCCAATTTATCTT 57.321 30.769 0.00 0.00 0.00 2.40
2303 7101 9.951866 ATATTTTTACAGACCCCCAATTTATCT 57.048 29.630 0.00 0.00 0.00 1.98
2308 7106 9.555411 AGTAAATATTTTTACAGACCCCCAATT 57.445 29.630 17.53 0.00 46.37 2.32
2309 7107 8.977412 CAGTAAATATTTTTACAGACCCCCAAT 58.023 33.333 17.53 0.00 46.37 3.16
2310 7108 7.397761 CCAGTAAATATTTTTACAGACCCCCAA 59.602 37.037 17.53 0.00 46.37 4.12
2311 7109 6.893005 CCAGTAAATATTTTTACAGACCCCCA 59.107 38.462 17.53 0.00 46.37 4.96
2312 7110 6.893554 ACCAGTAAATATTTTTACAGACCCCC 59.106 38.462 17.53 0.00 46.37 5.40
2313 7111 7.612633 TGACCAGTAAATATTTTTACAGACCCC 59.387 37.037 17.53 5.72 46.37 4.95
2314 7112 8.570068 TGACCAGTAAATATTTTTACAGACCC 57.430 34.615 17.53 6.48 46.37 4.46
2327 7125 8.301002 GCCAAAACAGTAAATGACCAGTAAATA 58.699 33.333 0.00 0.00 0.00 1.40
2328 7126 7.151976 GCCAAAACAGTAAATGACCAGTAAAT 58.848 34.615 0.00 0.00 0.00 1.40
2329 7127 6.461788 GGCCAAAACAGTAAATGACCAGTAAA 60.462 38.462 0.00 0.00 0.00 2.01
2330 7128 5.010213 GGCCAAAACAGTAAATGACCAGTAA 59.990 40.000 0.00 0.00 0.00 2.24
2331 7129 4.521256 GGCCAAAACAGTAAATGACCAGTA 59.479 41.667 0.00 0.00 0.00 2.74
2332 7130 3.320826 GGCCAAAACAGTAAATGACCAGT 59.679 43.478 0.00 0.00 0.00 4.00
2333 7131 3.573967 AGGCCAAAACAGTAAATGACCAG 59.426 43.478 5.01 0.00 0.00 4.00
2334 7132 3.320541 CAGGCCAAAACAGTAAATGACCA 59.679 43.478 5.01 0.00 0.00 4.02
2335 7133 3.572255 TCAGGCCAAAACAGTAAATGACC 59.428 43.478 5.01 0.00 0.00 4.02
2336 7134 4.846779 TCAGGCCAAAACAGTAAATGAC 57.153 40.909 5.01 0.00 0.00 3.06
2337 7135 6.183360 ACAAATCAGGCCAAAACAGTAAATGA 60.183 34.615 5.01 0.00 0.00 2.57
2338 7136 5.990996 ACAAATCAGGCCAAAACAGTAAATG 59.009 36.000 5.01 0.00 0.00 2.32
2339 7137 6.173427 ACAAATCAGGCCAAAACAGTAAAT 57.827 33.333 5.01 0.00 0.00 1.40
2340 7138 5.606348 ACAAATCAGGCCAAAACAGTAAA 57.394 34.783 5.01 0.00 0.00 2.01
2341 7139 5.606348 AACAAATCAGGCCAAAACAGTAA 57.394 34.783 5.01 0.00 0.00 2.24
2342 7140 5.606348 AAACAAATCAGGCCAAAACAGTA 57.394 34.783 5.01 0.00 0.00 2.74
2343 7141 4.486125 AAACAAATCAGGCCAAAACAGT 57.514 36.364 5.01 0.00 0.00 3.55
2344 7142 5.816449 AAAAACAAATCAGGCCAAAACAG 57.184 34.783 5.01 0.00 0.00 3.16
2367 7165 3.198409 TCTGAGCAGCTCTCACAAAAA 57.802 42.857 23.15 0.00 46.34 1.94
2368 7166 2.916702 TCTGAGCAGCTCTCACAAAA 57.083 45.000 23.15 0.00 46.34 2.44
2369 7167 2.038164 ACATCTGAGCAGCTCTCACAAA 59.962 45.455 23.15 0.68 46.34 2.83
2370 7168 1.622312 ACATCTGAGCAGCTCTCACAA 59.378 47.619 23.15 1.45 46.34 3.33
2371 7169 1.204231 GACATCTGAGCAGCTCTCACA 59.796 52.381 23.15 2.55 46.34 3.58
2372 7170 1.477700 AGACATCTGAGCAGCTCTCAC 59.522 52.381 23.15 8.76 46.34 3.51
2373 7171 9.708481 GTCATTTAGACATCTGAGCAGCTCTCA 62.708 44.444 23.15 9.95 46.55 3.27
2374 7172 4.383850 TTTAGACATCTGAGCAGCTCTC 57.616 45.455 23.15 11.79 42.23 3.20
2375 7173 4.405036 TCATTTAGACATCTGAGCAGCTCT 59.595 41.667 23.15 2.04 0.00 4.09
2376 7174 4.507388 GTCATTTAGACATCTGAGCAGCTC 59.493 45.833 16.21 16.21 46.77 4.09
2377 7175 4.440880 GTCATTTAGACATCTGAGCAGCT 58.559 43.478 0.00 0.00 46.77 4.24
2378 7176 4.792528 GTCATTTAGACATCTGAGCAGC 57.207 45.455 0.00 0.00 46.77 5.25
2390 7188 7.083858 CCGCTTCAAATTTCAAGTCATTTAGA 58.916 34.615 3.65 0.00 0.00 2.10
2391 7189 6.308766 CCCGCTTCAAATTTCAAGTCATTTAG 59.691 38.462 3.65 0.00 0.00 1.85
2392 7190 6.155827 CCCGCTTCAAATTTCAAGTCATTTA 58.844 36.000 3.65 0.00 0.00 1.40
2393 7191 4.990426 CCCGCTTCAAATTTCAAGTCATTT 59.010 37.500 3.65 0.00 0.00 2.32
2394 7192 4.559153 CCCGCTTCAAATTTCAAGTCATT 58.441 39.130 3.65 0.00 0.00 2.57
2395 7193 3.614870 GCCCGCTTCAAATTTCAAGTCAT 60.615 43.478 3.65 0.00 0.00 3.06
2396 7194 2.288152 GCCCGCTTCAAATTTCAAGTCA 60.288 45.455 3.65 0.00 0.00 3.41
2397 7195 2.328473 GCCCGCTTCAAATTTCAAGTC 58.672 47.619 3.65 0.00 0.00 3.01
2398 7196 1.000843 GGCCCGCTTCAAATTTCAAGT 59.999 47.619 3.65 0.00 0.00 3.16
2399 7197 1.273327 AGGCCCGCTTCAAATTTCAAG 59.727 47.619 0.00 0.00 0.00 3.02
2400 7198 1.272212 GAGGCCCGCTTCAAATTTCAA 59.728 47.619 0.00 0.00 0.00 2.69
2401 7199 0.887933 GAGGCCCGCTTCAAATTTCA 59.112 50.000 0.00 0.00 0.00 2.69
2402 7200 0.887933 TGAGGCCCGCTTCAAATTTC 59.112 50.000 0.00 0.00 0.00 2.17
2403 7201 0.603065 GTGAGGCCCGCTTCAAATTT 59.397 50.000 0.00 0.00 33.88 1.82
2404 7202 1.250840 GGTGAGGCCCGCTTCAAATT 61.251 55.000 0.00 0.00 33.88 1.82
2405 7203 1.678970 GGTGAGGCCCGCTTCAAAT 60.679 57.895 0.00 0.00 33.88 2.32
2406 7204 2.282180 GGTGAGGCCCGCTTCAAA 60.282 61.111 0.00 0.00 33.88 2.69
2415 7213 1.478105 GACAATTTGATGGGTGAGGCC 59.522 52.381 2.79 0.00 0.00 5.19
2416 7214 2.450476 AGACAATTTGATGGGTGAGGC 58.550 47.619 2.79 0.00 0.00 4.70
2417 7215 4.512944 CGATAGACAATTTGATGGGTGAGG 59.487 45.833 2.79 0.00 39.76 3.86
2418 7216 4.024556 GCGATAGACAATTTGATGGGTGAG 60.025 45.833 2.79 0.00 39.76 3.51
2419 7217 3.876914 GCGATAGACAATTTGATGGGTGA 59.123 43.478 2.79 0.00 39.76 4.02
2420 7218 3.627123 TGCGATAGACAATTTGATGGGTG 59.373 43.478 2.79 0.00 39.76 4.61
2421 7219 3.884895 TGCGATAGACAATTTGATGGGT 58.115 40.909 2.79 0.00 39.76 4.51
2422 7220 6.558771 TTATGCGATAGACAATTTGATGGG 57.441 37.500 2.79 0.00 39.76 4.00
2423 7221 8.854979 TTTTTATGCGATAGACAATTTGATGG 57.145 30.769 2.79 0.00 39.76 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.