Multiple sequence alignment - TraesCS1D01G252500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G252500 chr1D 100.000 3921 0 0 1 3921 344621933 344618013 0.000000e+00 7241.0
1 TraesCS1D01G252500 chr1D 80.000 325 42 15 127 438 116010094 116009780 6.600000e-53 219.0
2 TraesCS1D01G252500 chr1D 90.385 104 8 1 325 428 344621533 344621432 6.830000e-28 135.0
3 TraesCS1D01G252500 chr1D 85.915 71 8 2 3440 3509 417993614 417993683 1.510000e-09 75.0
4 TraesCS1D01G252500 chr1B 93.456 3163 141 29 774 3921 465976974 465980085 0.000000e+00 4634.0
5 TraesCS1D01G252500 chr1B 87.931 174 17 4 1 172 585897605 585897776 6.640000e-48 202.0
6 TraesCS1D01G252500 chr1A 95.013 2667 82 20 774 3393 444257651 444254989 0.000000e+00 4141.0
7 TraesCS1D01G252500 chr1A 89.401 434 29 4 1 428 444258477 444258055 7.460000e-147 531.0
8 TraesCS1D01G252500 chr1A 90.250 400 33 5 3523 3921 444254501 444254107 5.810000e-143 518.0
9 TraesCS1D01G252500 chr1A 89.614 337 26 7 417 747 444258140 444257807 1.680000e-113 420.0
10 TraesCS1D01G252500 chr1A 88.288 111 13 0 3450 3560 444254611 444254501 2.460000e-27 134.0
11 TraesCS1D01G252500 chr4B 85.282 496 46 12 3440 3921 192694712 192694230 1.640000e-133 486.0
12 TraesCS1D01G252500 chr4B 85.051 495 49 11 3440 3921 192698364 192697882 7.620000e-132 481.0
13 TraesCS1D01G252500 chr5D 83.401 494 52 20 3439 3918 377132587 377133064 7.780000e-117 431.0
14 TraesCS1D01G252500 chr5D 84.564 149 18 4 400 544 226518764 226518911 4.080000e-30 143.0
15 TraesCS1D01G252500 chr6D 83.162 487 60 11 3446 3921 454210358 454209883 3.620000e-115 425.0
16 TraesCS1D01G252500 chr6D 85.326 368 39 8 5 360 89332519 89332155 2.230000e-97 366.0
17 TraesCS1D01G252500 chr4A 84.318 440 43 13 3488 3916 628933282 628933706 1.310000e-109 407.0
18 TraesCS1D01G252500 chr4A 84.000 375 43 11 1 360 604173822 604174194 1.040000e-90 344.0
19 TraesCS1D01G252500 chr7B 82.353 476 51 18 3460 3921 442407090 442406634 2.210000e-102 383.0
20 TraesCS1D01G252500 chr7B 83.385 325 38 10 46 360 124346045 124345727 1.780000e-73 287.0
21 TraesCS1D01G252500 chr4D 82.658 444 50 18 3490 3921 319112775 319113203 6.190000e-98 368.0
22 TraesCS1D01G252500 chr7D 84.718 373 36 14 1 360 65924402 65924766 1.730000e-93 353.0
23 TraesCS1D01G252500 chr7D 96.875 32 1 0 3435 3466 572438497 572438466 2.000000e-03 54.7
24 TraesCS1D01G252500 chr7A 83.871 372 38 15 1 360 70311144 70311505 6.280000e-88 335.0
25 TraesCS1D01G252500 chr5B 82.097 391 41 12 1 384 12336938 12336570 1.370000e-79 307.0
26 TraesCS1D01G252500 chr3D 82.530 332 39 13 40 360 33848642 33848319 1.390000e-69 274.0
27 TraesCS1D01G252500 chr3D 100.000 29 0 0 3451 3479 11566818 11566846 2.000000e-03 54.7
28 TraesCS1D01G252500 chr2B 77.581 339 49 20 127 453 551394844 551395167 3.110000e-41 180.0
29 TraesCS1D01G252500 chr3B 89.855 69 5 2 3442 3509 199545954 199546021 1.940000e-13 87.9
30 TraesCS1D01G252500 chr2A 86.765 68 7 2 243 308 93880521 93880588 1.510000e-09 75.0
31 TraesCS1D01G252500 chr2D 100.000 29 0 0 3451 3479 544581383 544581355 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G252500 chr1D 344618013 344621933 3920 True 3688.0 7241 95.1925 1 3921 2 chr1D.!!$R2 3920
1 TraesCS1D01G252500 chr1B 465976974 465980085 3111 False 4634.0 4634 93.4560 774 3921 1 chr1B.!!$F1 3147
2 TraesCS1D01G252500 chr1A 444254107 444258477 4370 True 1148.8 4141 90.5132 1 3921 5 chr1A.!!$R1 3920
3 TraesCS1D01G252500 chr4B 192694230 192698364 4134 True 483.5 486 85.1665 3440 3921 2 chr4B.!!$R1 481

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
239 246 0.179067 TTTTCAGGAACACGGCGACT 60.179 50.000 16.62 0.0 0.00 4.18 F
745 840 0.467384 CAGGCTGATCCATCCTTCGT 59.533 55.000 9.42 0.0 37.29 3.85 F
787 928 0.692476 TGGTCTGACATTGAGGGTGG 59.308 55.000 10.38 0.0 0.00 4.61 F
1082 1223 0.695924 TTTGATCTTCCCCGCCTTGA 59.304 50.000 0.00 0.0 0.00 3.02 F
1283 1424 1.133575 AGGGATGGCTGGATTGTGATG 60.134 52.381 0.00 0.0 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1710 0.179234 GAAGCTCCTAACCTCCCTGC 59.821 60.000 0.0 0.00 0.00 4.85 R
1888 2051 1.609208 ATACAGCAATTCGGCCCATC 58.391 50.000 0.0 0.00 0.00 3.51 R
1945 2128 5.058490 CCAAGACAATTGTTTTGCTGGATT 58.942 37.500 27.9 5.96 38.40 3.01 R
2800 2984 1.615107 GCGAAACGGTCTCCTCAACG 61.615 60.000 0.0 0.00 0.00 4.10 R
3001 3186 3.625764 AGTAACATCGCAGAGAGAGAGAC 59.374 47.826 0.0 0.00 43.63 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 4.284234 ACTTGAGTAGCCATGGCAATTTTT 59.716 37.500 37.18 18.83 44.88 1.94
138 139 5.168526 TGCCATCGCATACTTTTAATGAC 57.831 39.130 0.00 0.00 41.12 3.06
227 234 7.670009 TGATGCCAAATTTACATTTTTCAGG 57.330 32.000 7.17 0.00 29.41 3.86
230 237 7.489574 TGCCAAATTTACATTTTTCAGGAAC 57.510 32.000 0.00 0.00 29.41 3.62
231 238 7.050377 TGCCAAATTTACATTTTTCAGGAACA 58.950 30.769 0.00 0.00 29.41 3.18
232 239 7.011857 TGCCAAATTTACATTTTTCAGGAACAC 59.988 33.333 0.00 0.00 29.41 3.32
233 240 7.563270 CCAAATTTACATTTTTCAGGAACACG 58.437 34.615 0.00 0.00 29.41 4.49
234 241 7.307101 CCAAATTTACATTTTTCAGGAACACGG 60.307 37.037 0.00 0.00 29.41 4.94
235 242 2.793278 ACATTTTTCAGGAACACGGC 57.207 45.000 0.00 0.00 0.00 5.68
236 243 1.001815 ACATTTTTCAGGAACACGGCG 60.002 47.619 4.80 4.80 0.00 6.46
237 244 1.265635 CATTTTTCAGGAACACGGCGA 59.734 47.619 16.62 0.00 0.00 5.54
238 245 0.658897 TTTTTCAGGAACACGGCGAC 59.341 50.000 16.62 1.47 0.00 5.19
239 246 0.179067 TTTTCAGGAACACGGCGACT 60.179 50.000 16.62 0.00 0.00 4.18
279 286 7.189079 TGGTATATACTTGTGTTCACATGGA 57.811 36.000 12.54 12.86 0.00 3.41
282 289 8.952278 GGTATATACTTGTGTTCACATGGAAAA 58.048 33.333 12.54 7.47 37.23 2.29
317 324 5.637006 TTCCACGGAAAACTTAATCCATG 57.363 39.130 0.00 0.00 35.34 3.66
326 333 5.490139 AAACTTAATCCATGTCTGCGATG 57.510 39.130 0.00 0.00 0.00 3.84
332 339 3.003394 TCCATGTCTGCGATGGAAAAT 57.997 42.857 0.00 0.00 45.25 1.82
367 374 5.659440 TTTTCCATGGCAAAATCTACTCC 57.341 39.130 7.12 0.00 0.00 3.85
368 375 4.314522 TTCCATGGCAAAATCTACTCCA 57.685 40.909 6.96 0.00 0.00 3.86
369 376 4.524802 TCCATGGCAAAATCTACTCCAT 57.475 40.909 6.96 0.00 37.99 3.41
370 377 4.870636 TCCATGGCAAAATCTACTCCATT 58.129 39.130 6.96 0.00 35.51 3.16
371 378 5.271598 TCCATGGCAAAATCTACTCCATTT 58.728 37.500 6.96 0.00 35.51 2.32
372 379 5.721000 TCCATGGCAAAATCTACTCCATTTT 59.279 36.000 6.96 0.00 35.51 1.82
373 380 6.213195 TCCATGGCAAAATCTACTCCATTTTT 59.787 34.615 6.96 0.00 35.51 1.94
374 381 7.398618 TCCATGGCAAAATCTACTCCATTTTTA 59.601 33.333 6.96 0.00 35.51 1.52
375 382 7.492344 CCATGGCAAAATCTACTCCATTTTTAC 59.508 37.037 0.00 0.00 35.51 2.01
376 383 6.930731 TGGCAAAATCTACTCCATTTTTACC 58.069 36.000 0.00 0.00 32.25 2.85
377 384 6.495181 TGGCAAAATCTACTCCATTTTTACCA 59.505 34.615 0.00 0.00 35.95 3.25
378 385 7.180051 TGGCAAAATCTACTCCATTTTTACCAT 59.820 33.333 0.00 0.00 34.68 3.55
379 386 7.492344 GGCAAAATCTACTCCATTTTTACCATG 59.508 37.037 0.00 0.00 32.25 3.66
380 387 7.492344 GCAAAATCTACTCCATTTTTACCATGG 59.508 37.037 11.19 11.19 42.51 3.66
381 388 6.715347 AATCTACTCCATTTTTACCATGGC 57.285 37.500 13.04 0.00 41.10 4.40
382 389 5.186256 TCTACTCCATTTTTACCATGGCA 57.814 39.130 13.04 0.00 41.10 4.92
383 390 5.575157 TCTACTCCATTTTTACCATGGCAA 58.425 37.500 13.04 1.21 41.10 4.52
384 391 4.806640 ACTCCATTTTTACCATGGCAAG 57.193 40.909 13.04 0.00 41.10 4.01
385 392 4.415596 ACTCCATTTTTACCATGGCAAGA 58.584 39.130 13.04 0.00 41.10 3.02
386 393 4.837860 ACTCCATTTTTACCATGGCAAGAA 59.162 37.500 13.04 7.47 41.10 2.52
387 394 5.484998 ACTCCATTTTTACCATGGCAAGAAT 59.515 36.000 13.04 9.74 41.10 2.40
388 395 5.732633 TCCATTTTTACCATGGCAAGAATG 58.267 37.500 24.59 24.59 41.10 2.67
404 411 6.340537 CAAGAATGCTTTTATTCACATGGC 57.659 37.500 0.00 0.00 39.08 4.40
405 412 5.664294 AGAATGCTTTTATTCACATGGCA 57.336 34.783 0.00 0.00 39.08 4.92
406 413 6.040209 AGAATGCTTTTATTCACATGGCAA 57.960 33.333 0.00 0.00 39.08 4.52
407 414 6.465948 AGAATGCTTTTATTCACATGGCAAA 58.534 32.000 0.00 0.00 39.08 3.68
408 415 7.107542 AGAATGCTTTTATTCACATGGCAAAT 58.892 30.769 0.00 0.00 39.08 2.32
409 416 7.608761 AGAATGCTTTTATTCACATGGCAAATT 59.391 29.630 0.00 0.00 39.08 1.82
410 417 7.690952 ATGCTTTTATTCACATGGCAAATTT 57.309 28.000 0.00 0.00 0.00 1.82
411 418 7.507733 TGCTTTTATTCACATGGCAAATTTT 57.492 28.000 0.00 0.00 0.00 1.82
412 419 8.613060 TGCTTTTATTCACATGGCAAATTTTA 57.387 26.923 0.00 0.00 0.00 1.52
413 420 8.719648 TGCTTTTATTCACATGGCAAATTTTAG 58.280 29.630 0.00 0.00 0.00 1.85
414 421 8.720562 GCTTTTATTCACATGGCAAATTTTAGT 58.279 29.630 0.00 0.00 0.00 2.24
481 488 6.646267 AGAATGCTTTTATTCACATGGCAAT 58.354 32.000 0.00 0.00 39.08 3.56
487 494 6.737750 GCTTTTATTCACATGGCAATTTTTCG 59.262 34.615 0.00 0.00 0.00 3.46
503 510 8.012241 GCAATTTTTCGTTTATTTTGCCATGTA 58.988 29.630 0.00 0.00 33.64 2.29
565 572 1.992519 TTTCGGACGGGGGTTTTCCA 61.993 55.000 0.00 0.00 42.91 3.53
566 573 1.992519 TTCGGACGGGGGTTTTCCAA 61.993 55.000 0.00 0.00 42.91 3.53
579 586 4.147364 GGTTTTCCAAATCGAACGTTCGG 61.147 47.826 40.60 27.80 44.26 4.30
595 602 7.201427 CGAACGTTCGGTGAATATTAGGTTTTA 60.201 37.037 36.53 0.00 46.30 1.52
678 688 9.899661 TTTAGCTTCTTTACAAGGCATATAAGA 57.100 29.630 0.00 0.00 0.00 2.10
679 689 7.793927 AGCTTCTTTACAAGGCATATAAGAC 57.206 36.000 0.00 0.00 0.00 3.01
689 699 3.006967 AGGCATATAAGACGGTGATGGAC 59.993 47.826 0.00 0.00 0.00 4.02
690 700 3.244078 GGCATATAAGACGGTGATGGACA 60.244 47.826 0.00 0.00 0.00 4.02
698 708 1.227999 CGGTGATGGACAAGTTGCGT 61.228 55.000 1.81 0.00 0.00 5.24
700 710 2.147958 GGTGATGGACAAGTTGCGTTA 58.852 47.619 1.81 0.00 0.00 3.18
708 720 2.356695 GACAAGTTGCGTTAGGGTTGTT 59.643 45.455 1.81 0.00 0.00 2.83
743 755 3.505480 ATTCAGGCTGATCCATCCTTC 57.495 47.619 19.50 0.00 37.29 3.46
745 840 0.467384 CAGGCTGATCCATCCTTCGT 59.533 55.000 9.42 0.00 37.29 3.85
747 842 2.103094 CAGGCTGATCCATCCTTCGTAA 59.897 50.000 9.42 0.00 37.29 3.18
752 847 4.201822 GCTGATCCATCCTTCGTAACAAAC 60.202 45.833 0.00 0.00 0.00 2.93
757 852 6.642707 TCCATCCTTCGTAACAAACAAATT 57.357 33.333 0.00 0.00 0.00 1.82
772 867 2.169561 ACAAATTGTTTGGTGGGTGGTC 59.830 45.455 7.28 0.00 44.81 4.02
779 920 0.850100 TTGGTGGGTGGTCTGACATT 59.150 50.000 10.38 0.00 0.00 2.71
787 928 0.692476 TGGTCTGACATTGAGGGTGG 59.308 55.000 10.38 0.00 0.00 4.61
792 933 2.237143 TCTGACATTGAGGGTGGATCAC 59.763 50.000 0.00 0.00 0.00 3.06
1082 1223 0.695924 TTTGATCTTCCCCGCCTTGA 59.304 50.000 0.00 0.00 0.00 3.02
1112 1253 3.908213 TGTTTCCGCAGCTTTAATTTCC 58.092 40.909 0.00 0.00 0.00 3.13
1119 1260 2.428530 GCAGCTTTAATTTCCTCCCCTG 59.571 50.000 0.00 0.00 0.00 4.45
1137 1278 2.619849 CCTGTGCAATCTCCTTGGTGAT 60.620 50.000 0.00 0.00 35.25 3.06
1168 1309 6.493189 TGGTTATGTAATGCTATGAGGTCA 57.507 37.500 0.00 0.00 0.00 4.02
1224 1365 4.096732 AGGTTGATTTCGTTGCTATTGC 57.903 40.909 0.00 0.00 40.20 3.56
1271 1412 1.204704 GCTTTGTTTGGTAGGGATGGC 59.795 52.381 0.00 0.00 0.00 4.40
1283 1424 1.133575 AGGGATGGCTGGATTGTGATG 60.134 52.381 0.00 0.00 0.00 3.07
1368 1509 5.186603 TGTTGGCTGCATATTTGTTTGGATA 59.813 36.000 0.50 0.00 0.00 2.59
1470 1611 7.292356 TCCTTTATTCATCTGTTAGGCTGGATA 59.708 37.037 0.00 0.00 0.00 2.59
1471 1612 7.389053 CCTTTATTCATCTGTTAGGCTGGATAC 59.611 40.741 0.00 0.00 0.00 2.24
1491 1634 4.524316 ACATGCGTTACTGTTAGTACCA 57.476 40.909 0.00 0.00 28.93 3.25
1508 1651 9.310716 GTTAGTACCAAAGTTATAGACATGTCC 57.689 37.037 22.21 6.58 0.00 4.02
1510 1653 7.328737 AGTACCAAAGTTATAGACATGTCCAC 58.671 38.462 22.21 13.45 0.00 4.02
1537 1680 8.595362 TGGACTATTGTCTATATATGGTGAGG 57.405 38.462 7.24 0.00 42.54 3.86
1562 1705 5.106673 GCAGGTATGTGAAGACTGTTTAACC 60.107 44.000 0.00 0.00 0.00 2.85
1567 1710 5.811399 TGTGAAGACTGTTTAACCAGTTG 57.189 39.130 7.14 0.00 45.46 3.16
1592 1735 3.497942 GGGAGGTTAGGAGCTTCAAACAA 60.498 47.826 0.00 0.00 32.79 2.83
1598 1741 5.393678 GGTTAGGAGCTTCAAACAACAACAA 60.394 40.000 0.00 0.00 0.00 2.83
1603 1746 6.756542 AGGAGCTTCAAACAACAACAAATAAC 59.243 34.615 0.00 0.00 0.00 1.89
1607 1750 7.063308 AGCTTCAAACAACAACAAATAACTGTG 59.937 33.333 0.00 0.00 0.00 3.66
1630 1773 8.822805 TGTGGGTTATTCTCTAAAGTCATAGTT 58.177 33.333 0.00 0.00 0.00 2.24
1646 1789 5.710099 GTCATAGTTGGGAACTTGGAATCAA 59.290 40.000 0.00 0.00 42.81 2.57
1693 1836 9.161684 GAAGAAAAATGTGAAATTTGTGCAATC 57.838 29.630 0.00 0.00 0.00 2.67
1695 1838 8.842280 AGAAAAATGTGAAATTTGTGCAATCAT 58.158 25.926 0.00 0.00 0.00 2.45
1696 1839 9.453325 GAAAAATGTGAAATTTGTGCAATCATT 57.547 25.926 0.00 0.00 0.00 2.57
1707 1850 5.652994 TGTGCAATCATTAAAGGGGTTAC 57.347 39.130 0.00 0.00 0.00 2.50
1708 1851 5.080337 TGTGCAATCATTAAAGGGGTTACA 58.920 37.500 0.00 0.00 0.00 2.41
1710 1853 5.047660 GTGCAATCATTAAAGGGGTTACACA 60.048 40.000 0.00 0.00 0.00 3.72
1729 1872 2.304180 ACAGTTCCCATCTCCTGTCAAG 59.696 50.000 0.00 0.00 32.97 3.02
1789 1932 7.285401 AGCTTGTTATTGGTCGATATTTCCATT 59.715 33.333 0.00 0.00 0.00 3.16
1830 1993 5.048991 CAGTGTTAACCTATTTGCGGTTCTT 60.049 40.000 2.48 0.00 43.39 2.52
1831 1994 6.148150 CAGTGTTAACCTATTTGCGGTTCTTA 59.852 38.462 2.48 0.00 43.39 2.10
1832 1995 6.711645 AGTGTTAACCTATTTGCGGTTCTTAA 59.288 34.615 2.48 0.00 43.39 1.85
1833 1996 7.019418 GTGTTAACCTATTTGCGGTTCTTAAG 58.981 38.462 2.48 0.00 43.39 1.85
1834 1997 6.935771 TGTTAACCTATTTGCGGTTCTTAAGA 59.064 34.615 0.00 0.00 43.39 2.10
1835 1998 7.608761 TGTTAACCTATTTGCGGTTCTTAAGAT 59.391 33.333 5.89 0.00 43.39 2.40
1836 1999 8.456471 GTTAACCTATTTGCGGTTCTTAAGATT 58.544 33.333 5.89 0.00 43.39 2.40
1837 2000 7.462571 AACCTATTTGCGGTTCTTAAGATTT 57.537 32.000 5.89 0.00 40.63 2.17
1838 2001 7.085052 ACCTATTTGCGGTTCTTAAGATTTC 57.915 36.000 5.89 0.53 0.00 2.17
1839 2002 6.657541 ACCTATTTGCGGTTCTTAAGATTTCA 59.342 34.615 5.89 0.00 0.00 2.69
1840 2003 7.148239 ACCTATTTGCGGTTCTTAAGATTTCAG 60.148 37.037 5.89 2.85 0.00 3.02
1841 2004 6.817765 ATTTGCGGTTCTTAAGATTTCAGA 57.182 33.333 5.89 0.00 0.00 3.27
1842 2005 5.607119 TTGCGGTTCTTAAGATTTCAGAC 57.393 39.130 5.89 0.00 0.00 3.51
1843 2006 4.637276 TGCGGTTCTTAAGATTTCAGACA 58.363 39.130 5.89 0.00 0.00 3.41
1844 2007 5.060506 TGCGGTTCTTAAGATTTCAGACAA 58.939 37.500 5.89 0.00 0.00 3.18
1845 2008 5.705441 TGCGGTTCTTAAGATTTCAGACAAT 59.295 36.000 5.89 0.00 0.00 2.71
1846 2009 6.024049 GCGGTTCTTAAGATTTCAGACAATG 58.976 40.000 5.89 0.00 0.00 2.82
1847 2010 6.348540 GCGGTTCTTAAGATTTCAGACAATGT 60.349 38.462 5.89 0.00 0.00 2.71
1848 2011 7.017645 CGGTTCTTAAGATTTCAGACAATGTG 58.982 38.462 5.89 0.00 0.00 3.21
1849 2012 7.307989 CGGTTCTTAAGATTTCAGACAATGTGT 60.308 37.037 5.89 0.00 0.00 3.72
1850 2013 8.352942 GGTTCTTAAGATTTCAGACAATGTGTT 58.647 33.333 5.89 0.00 0.00 3.32
1896 2059 2.575532 ACAATAGTGATTGATGGGCCG 58.424 47.619 0.00 0.00 44.59 6.13
1945 2128 4.148079 TGGAACACAATTATGGCAACTCA 58.852 39.130 0.00 0.00 37.61 3.41
1994 2177 2.834549 TCTCCTCTTTAGGCTCTGTTGG 59.165 50.000 0.00 0.00 43.31 3.77
2800 2984 2.161609 CAGTTTTACGGTGCCCAAGATC 59.838 50.000 0.00 0.00 0.00 2.75
3001 3186 4.188247 TGAAGTTAGTCATCAAGTCGGG 57.812 45.455 0.00 0.00 0.00 5.14
3064 3255 6.521133 CACTGAATCTCTTCGTTTTTATGCAC 59.479 38.462 0.00 0.00 33.86 4.57
3186 3379 6.458206 CCGTGATACATTGTTTTACCAGATGG 60.458 42.308 0.00 0.00 42.17 3.51
3219 3412 5.874897 AGAGATCTCATTAGAAAGCAGCT 57.125 39.130 24.39 0.00 34.73 4.24
3420 3629 6.703165 GCAAGATTCTGTGTTTTGAAATCCTT 59.297 34.615 0.00 0.00 0.00 3.36
3421 3630 7.867403 GCAAGATTCTGTGTTTTGAAATCCTTA 59.133 33.333 0.00 0.00 0.00 2.69
3422 3631 9.403110 CAAGATTCTGTGTTTTGAAATCCTTAG 57.597 33.333 0.00 0.00 0.00 2.18
3423 3632 8.924511 AGATTCTGTGTTTTGAAATCCTTAGA 57.075 30.769 0.00 0.00 0.00 2.10
3424 3633 9.007901 AGATTCTGTGTTTTGAAATCCTTAGAG 57.992 33.333 0.00 0.00 0.00 2.43
3425 3634 6.560253 TCTGTGTTTTGAAATCCTTAGAGC 57.440 37.500 0.00 0.00 0.00 4.09
3426 3635 6.061441 TCTGTGTTTTGAAATCCTTAGAGCA 58.939 36.000 0.00 0.00 0.00 4.26
3427 3636 6.545666 TCTGTGTTTTGAAATCCTTAGAGCAA 59.454 34.615 0.00 0.00 0.00 3.91
3428 3637 6.503524 TGTGTTTTGAAATCCTTAGAGCAAC 58.496 36.000 0.00 0.00 0.00 4.17
3429 3638 6.321181 TGTGTTTTGAAATCCTTAGAGCAACT 59.679 34.615 0.00 0.00 0.00 3.16
3430 3639 6.858478 GTGTTTTGAAATCCTTAGAGCAACTC 59.142 38.462 0.00 0.00 0.00 3.01
3431 3640 6.016276 TGTTTTGAAATCCTTAGAGCAACTCC 60.016 38.462 0.00 0.00 0.00 3.85
3432 3641 3.861840 TGAAATCCTTAGAGCAACTCCG 58.138 45.455 0.00 0.00 0.00 4.63
3433 3642 3.513912 TGAAATCCTTAGAGCAACTCCGA 59.486 43.478 0.00 0.00 0.00 4.55
3457 4028 1.608025 CCTTAGAGCAACTCCAACGCA 60.608 52.381 0.00 0.00 0.00 5.24
3485 4056 1.085501 AACGGACGCGTGTTTGTTCT 61.086 50.000 20.70 0.00 0.00 3.01
3612 4229 7.035840 AGCTCTTTTTGTGGCATATCAATAG 57.964 36.000 0.00 0.00 0.00 1.73
3810 4431 6.839124 ACCAAATCATCTTGCAGTTGAATA 57.161 33.333 0.00 0.00 28.86 1.75
3816 4437 8.969260 AATCATCTTGCAGTTGAATATGAGTA 57.031 30.769 0.00 0.00 28.86 2.59
3820 4441 7.129457 TCTTGCAGTTGAATATGAGTATCCT 57.871 36.000 0.00 0.00 0.00 3.24
3896 8164 1.009675 GCTCAGGCACAACACAACG 60.010 57.895 0.00 0.00 38.54 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.072452 GCCATGGCTACTCAAGTATATTTTCC 60.072 42.308 29.98 0.00 38.26 3.13
119 120 5.626543 GCCATGTCATTAAAAGTATGCGATG 59.373 40.000 0.00 0.00 0.00 3.84
123 124 7.775397 ATTTGCCATGTCATTAAAAGTATGC 57.225 32.000 0.00 0.00 0.00 3.14
162 163 5.220835 GCCTTTACAATAAATTTGCCATGGC 60.221 40.000 30.54 30.54 42.35 4.40
212 219 5.227152 GCCGTGTTCCTGAAAAATGTAAAT 58.773 37.500 0.00 0.00 0.00 1.40
219 226 0.658897 GTCGCCGTGTTCCTGAAAAA 59.341 50.000 0.00 0.00 0.00 1.94
220 227 0.179067 AGTCGCCGTGTTCCTGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
221 228 0.179067 AAGTCGCCGTGTTCCTGAAA 60.179 50.000 0.00 0.00 0.00 2.69
222 229 0.179067 AAAGTCGCCGTGTTCCTGAA 60.179 50.000 0.00 0.00 0.00 3.02
224 231 0.661020 AAAAAGTCGCCGTGTTCCTG 59.339 50.000 0.00 0.00 0.00 3.86
225 232 1.869132 GTAAAAAGTCGCCGTGTTCCT 59.131 47.619 0.00 0.00 0.00 3.36
226 233 1.869132 AGTAAAAAGTCGCCGTGTTCC 59.131 47.619 0.00 0.00 0.00 3.62
227 234 4.151157 ACATAGTAAAAAGTCGCCGTGTTC 59.849 41.667 0.00 0.00 0.00 3.18
230 237 4.259690 GCTACATAGTAAAAAGTCGCCGTG 60.260 45.833 0.00 0.00 0.00 4.94
231 238 3.861689 GCTACATAGTAAAAAGTCGCCGT 59.138 43.478 0.00 0.00 0.00 5.68
232 239 3.861113 TGCTACATAGTAAAAAGTCGCCG 59.139 43.478 0.00 0.00 0.00 6.46
233 240 5.277345 CCATGCTACATAGTAAAAAGTCGCC 60.277 44.000 0.00 0.00 0.00 5.54
234 241 5.293569 ACCATGCTACATAGTAAAAAGTCGC 59.706 40.000 0.00 0.00 0.00 5.19
235 242 6.903883 ACCATGCTACATAGTAAAAAGTCG 57.096 37.500 0.00 0.00 0.00 4.18
300 307 4.662145 GCAGACATGGATTAAGTTTTCCG 58.338 43.478 0.00 0.00 34.58 4.30
312 319 2.488204 TTTTCCATCGCAGACATGGA 57.512 45.000 0.00 0.00 46.81 3.41
317 324 6.329496 TGGATTAAAATTTTCCATCGCAGAC 58.671 36.000 6.72 0.00 42.51 3.51
348 355 4.524802 ATGGAGTAGATTTTGCCATGGA 57.475 40.909 18.40 0.00 37.91 3.41
349 356 5.603170 AAATGGAGTAGATTTTGCCATGG 57.397 39.130 7.63 7.63 39.19 3.66
350 357 7.492344 GGTAAAAATGGAGTAGATTTTGCCATG 59.508 37.037 10.67 0.00 43.03 3.66
351 358 7.180051 TGGTAAAAATGGAGTAGATTTTGCCAT 59.820 33.333 13.25 0.00 45.90 4.40
352 359 6.930731 GGTAAAAATGGAGTAGATTTTGCCA 58.069 36.000 10.67 0.00 43.03 4.92
353 360 6.930731 TGGTAAAAATGGAGTAGATTTTGCC 58.069 36.000 9.18 9.18 43.49 4.52
354 361 7.492344 CCATGGTAAAAATGGAGTAGATTTTGC 59.508 37.037 2.57 0.00 46.44 3.68
355 362 7.492344 GCCATGGTAAAAATGGAGTAGATTTTG 59.508 37.037 14.67 0.00 46.44 2.44
356 363 7.180051 TGCCATGGTAAAAATGGAGTAGATTTT 59.820 33.333 14.67 0.00 46.44 1.82
357 364 6.667414 TGCCATGGTAAAAATGGAGTAGATTT 59.333 34.615 14.67 0.00 46.44 2.17
358 365 6.194235 TGCCATGGTAAAAATGGAGTAGATT 58.806 36.000 14.67 0.00 46.44 2.40
359 366 5.765510 TGCCATGGTAAAAATGGAGTAGAT 58.234 37.500 14.67 0.00 46.44 1.98
360 367 5.186256 TGCCATGGTAAAAATGGAGTAGA 57.814 39.130 14.67 0.00 46.44 2.59
361 368 5.652014 TCTTGCCATGGTAAAAATGGAGTAG 59.348 40.000 16.54 0.80 46.44 2.57
362 369 5.575157 TCTTGCCATGGTAAAAATGGAGTA 58.425 37.500 16.54 0.00 46.44 2.59
363 370 4.415596 TCTTGCCATGGTAAAAATGGAGT 58.584 39.130 16.54 0.00 46.44 3.85
364 371 5.404466 TTCTTGCCATGGTAAAAATGGAG 57.596 39.130 16.54 3.00 46.44 3.86
365 372 5.732633 CATTCTTGCCATGGTAAAAATGGA 58.267 37.500 25.73 13.62 46.44 3.41
366 373 4.333372 GCATTCTTGCCATGGTAAAAATGG 59.667 41.667 30.78 18.67 46.29 3.16
367 374 5.473796 GCATTCTTGCCATGGTAAAAATG 57.526 39.130 27.87 27.87 43.38 2.32
381 388 5.870433 TGCCATGTGAATAAAAGCATTCTTG 59.130 36.000 0.00 0.00 36.16 3.02
382 389 6.040209 TGCCATGTGAATAAAAGCATTCTT 57.960 33.333 0.00 0.00 36.16 2.52
383 390 5.664294 TGCCATGTGAATAAAAGCATTCT 57.336 34.783 0.00 0.00 36.16 2.40
384 391 6.724694 TTTGCCATGTGAATAAAAGCATTC 57.275 33.333 0.00 0.00 35.80 2.67
385 392 7.690952 AATTTGCCATGTGAATAAAAGCATT 57.309 28.000 0.00 0.00 0.00 3.56
386 393 7.690952 AAATTTGCCATGTGAATAAAAGCAT 57.309 28.000 0.00 0.00 0.00 3.79
387 394 7.507733 AAAATTTGCCATGTGAATAAAAGCA 57.492 28.000 0.00 0.00 0.00 3.91
388 395 8.720562 ACTAAAATTTGCCATGTGAATAAAAGC 58.279 29.630 0.00 0.00 0.00 3.51
527 534 8.956014 GTCCGAAAACGTTATGACAAATAAAAA 58.044 29.630 0.00 0.00 0.00 1.94
540 547 1.005156 CCCCCGTCCGAAAACGTTA 60.005 57.895 0.00 0.00 41.01 3.18
546 553 1.228215 GGAAAACCCCCGTCCGAAA 60.228 57.895 0.00 0.00 0.00 3.46
551 558 0.524414 CGATTTGGAAAACCCCCGTC 59.476 55.000 0.00 0.00 0.00 4.79
553 560 1.068125 GTTCGATTTGGAAAACCCCCG 60.068 52.381 0.00 0.00 0.00 5.73
660 670 6.046593 TCACCGTCTTATATGCCTTGTAAAG 58.953 40.000 0.00 0.00 45.69 1.85
673 683 4.253685 CAACTTGTCCATCACCGTCTTAT 58.746 43.478 0.00 0.00 0.00 1.73
678 688 1.227999 CGCAACTTGTCCATCACCGT 61.228 55.000 0.00 0.00 0.00 4.83
679 689 1.227999 ACGCAACTTGTCCATCACCG 61.228 55.000 0.00 0.00 0.00 4.94
689 699 3.430333 AAACAACCCTAACGCAACTTG 57.570 42.857 0.00 0.00 0.00 3.16
690 700 4.459390 AAAAACAACCCTAACGCAACTT 57.541 36.364 0.00 0.00 0.00 2.66
718 730 4.077822 GGATGGATCAGCCTGAATAAAGG 58.922 47.826 0.00 0.00 36.92 3.11
752 847 2.433970 AGACCACCCACCAAACAATTTG 59.566 45.455 0.00 0.00 40.32 2.32
757 852 0.106918 GTCAGACCACCCACCAAACA 60.107 55.000 0.00 0.00 0.00 2.83
760 855 0.850100 AATGTCAGACCACCCACCAA 59.150 50.000 0.00 0.00 0.00 3.67
761 856 0.110295 CAATGTCAGACCACCCACCA 59.890 55.000 0.00 0.00 0.00 4.17
765 860 0.035056 CCCTCAATGTCAGACCACCC 60.035 60.000 0.00 0.00 0.00 4.61
767 862 1.611673 CCACCCTCAATGTCAGACCAC 60.612 57.143 0.00 0.00 0.00 4.16
768 863 0.692476 CCACCCTCAATGTCAGACCA 59.308 55.000 0.00 0.00 0.00 4.02
772 867 2.238144 AGTGATCCACCCTCAATGTCAG 59.762 50.000 0.00 0.00 34.49 3.51
779 920 0.613260 CCGAAAGTGATCCACCCTCA 59.387 55.000 0.00 0.00 34.49 3.86
897 1038 2.725008 GGATGCGAGAGGACGGAG 59.275 66.667 0.00 0.00 37.01 4.63
1082 1223 4.989279 AGCTGCGGAAACATTAATCAAT 57.011 36.364 0.00 0.00 0.00 2.57
1112 1253 0.622665 AAGGAGATTGCACAGGGGAG 59.377 55.000 0.00 0.00 0.00 4.30
1119 1260 1.747355 CCATCACCAAGGAGATTGCAC 59.253 52.381 0.00 0.00 37.60 4.57
1137 1278 5.372343 AGCATTACATAACCATCAGTCCA 57.628 39.130 0.00 0.00 0.00 4.02
1168 1309 3.370231 GCCCACCACGCCGAAATT 61.370 61.111 0.00 0.00 0.00 1.82
1224 1365 1.974875 GCAACCAAACCTACCCCCG 60.975 63.158 0.00 0.00 0.00 5.73
1271 1412 6.368243 GCATGTAGATACTCATCACAATCCAG 59.632 42.308 0.00 0.00 33.21 3.86
1283 1424 2.166664 GGGATCCGGCATGTAGATACTC 59.833 54.545 5.45 0.00 0.00 2.59
1368 1509 3.782523 TCACCAAATCCTATTCTGAGGCT 59.217 43.478 0.00 0.00 36.45 4.58
1470 1611 4.524316 TGGTACTAACAGTAACGCATGT 57.476 40.909 0.00 0.00 41.22 3.21
1471 1612 5.407387 ACTTTGGTACTAACAGTAACGCATG 59.593 40.000 0.00 0.00 41.22 4.06
1491 1634 7.016153 TCCAAGTGGACATGTCTATAACTTT 57.984 36.000 24.50 7.68 39.78 2.66
1508 1651 9.645059 CACCATATATAGACAATAGTCCAAGTG 57.355 37.037 0.00 0.00 46.15 3.16
1537 1680 2.770164 ACAGTCTTCACATACCTGCC 57.230 50.000 0.00 0.00 0.00 4.85
1562 1705 0.984230 TCCTAACCTCCCTGCAACTG 59.016 55.000 0.00 0.00 0.00 3.16
1567 1710 0.179234 GAAGCTCCTAACCTCCCTGC 59.821 60.000 0.00 0.00 0.00 4.85
1603 1746 8.478877 ACTATGACTTTAGAGAATAACCCACAG 58.521 37.037 0.00 0.00 0.00 3.66
1607 1750 7.715686 CCCAACTATGACTTTAGAGAATAACCC 59.284 40.741 0.00 0.00 0.00 4.11
1616 1759 6.271391 TCCAAGTTCCCAACTATGACTTTAGA 59.729 38.462 0.00 0.00 41.91 2.10
1663 1806 9.161684 GCACAAATTTCACATTTTTCTTCATTC 57.838 29.630 0.00 0.00 0.00 2.67
1679 1822 6.654582 ACCCCTTTAATGATTGCACAAATTTC 59.345 34.615 0.00 0.00 0.00 2.17
1686 1829 5.047660 TGTGTAACCCCTTTAATGATTGCAC 60.048 40.000 0.00 0.00 34.36 4.57
1688 1831 5.185056 ACTGTGTAACCCCTTTAATGATTGC 59.815 40.000 0.00 0.00 34.36 3.56
1693 1836 4.461431 GGGAACTGTGTAACCCCTTTAATG 59.539 45.833 0.00 0.00 36.65 1.90
1695 1838 3.462579 TGGGAACTGTGTAACCCCTTTAA 59.537 43.478 0.00 0.00 41.44 1.52
1696 1839 3.054576 TGGGAACTGTGTAACCCCTTTA 58.945 45.455 0.00 0.00 41.44 1.85
1697 1840 1.854280 TGGGAACTGTGTAACCCCTTT 59.146 47.619 0.00 0.00 41.44 3.11
1707 1850 1.625315 TGACAGGAGATGGGAACTGTG 59.375 52.381 0.40 0.00 43.61 3.66
1708 1851 2.030027 TGACAGGAGATGGGAACTGT 57.970 50.000 0.00 0.00 45.99 3.55
1710 1853 2.625639 ACTTGACAGGAGATGGGAACT 58.374 47.619 0.00 0.00 0.00 3.01
1751 1894 6.372659 ACCAATAACAAGCTTACACTGATCTG 59.627 38.462 0.00 0.00 0.00 2.90
1830 1993 8.675705 TTGAGAACACATTGTCTGAAATCTTA 57.324 30.769 0.00 0.00 0.00 2.10
1831 1994 7.572523 TTGAGAACACATTGTCTGAAATCTT 57.427 32.000 0.00 0.00 0.00 2.40
1832 1995 7.664731 AGATTGAGAACACATTGTCTGAAATCT 59.335 33.333 0.00 0.00 0.00 2.40
1833 1996 7.814642 AGATTGAGAACACATTGTCTGAAATC 58.185 34.615 0.00 0.00 0.00 2.17
1834 1997 7.756395 AGATTGAGAACACATTGTCTGAAAT 57.244 32.000 0.00 0.00 0.00 2.17
1835 1998 7.714813 TGTAGATTGAGAACACATTGTCTGAAA 59.285 33.333 0.00 0.00 0.00 2.69
1836 1999 7.171508 GTGTAGATTGAGAACACATTGTCTGAA 59.828 37.037 0.00 0.00 42.40 3.02
1837 2000 6.646653 GTGTAGATTGAGAACACATTGTCTGA 59.353 38.462 0.00 0.00 42.40 3.27
1838 2001 6.648310 AGTGTAGATTGAGAACACATTGTCTG 59.352 38.462 7.49 0.00 44.68 3.51
1839 2002 6.648310 CAGTGTAGATTGAGAACACATTGTCT 59.352 38.462 7.49 0.00 44.68 3.41
1840 2003 6.425114 ACAGTGTAGATTGAGAACACATTGTC 59.575 38.462 0.00 0.00 44.68 3.18
1841 2004 6.291377 ACAGTGTAGATTGAGAACACATTGT 58.709 36.000 0.00 0.00 44.68 2.71
1842 2005 6.791887 ACAGTGTAGATTGAGAACACATTG 57.208 37.500 0.00 0.00 44.68 2.82
1843 2006 7.931407 TGTAACAGTGTAGATTGAGAACACATT 59.069 33.333 0.00 4.25 44.68 2.71
1844 2007 7.441836 TGTAACAGTGTAGATTGAGAACACAT 58.558 34.615 0.00 0.00 44.68 3.21
1845 2008 6.811954 TGTAACAGTGTAGATTGAGAACACA 58.188 36.000 0.00 0.00 44.68 3.72
1846 2009 7.891183 ATGTAACAGTGTAGATTGAGAACAC 57.109 36.000 0.00 0.00 43.02 3.32
1847 2010 9.419297 GTTATGTAACAGTGTAGATTGAGAACA 57.581 33.333 0.00 0.00 36.25 3.18
1848 2011 9.640963 AGTTATGTAACAGTGTAGATTGAGAAC 57.359 33.333 0.00 0.00 38.62 3.01
1888 2051 1.609208 ATACAGCAATTCGGCCCATC 58.391 50.000 0.00 0.00 0.00 3.51
1945 2128 5.058490 CCAAGACAATTGTTTTGCTGGATT 58.942 37.500 27.90 5.96 38.40 3.01
1994 2177 7.011482 CACAGCTATTTCTTATACTGTTGTCCC 59.989 40.741 0.00 0.00 36.28 4.46
2800 2984 1.615107 GCGAAACGGTCTCCTCAACG 61.615 60.000 0.00 0.00 0.00 4.10
3001 3186 3.625764 AGTAACATCGCAGAGAGAGAGAC 59.374 47.826 0.00 0.00 43.63 3.36
3064 3255 7.459486 CATCTCAGAATTTTACCAGAAACTCG 58.541 38.462 0.00 0.00 0.00 4.18
3186 3379 3.857549 TGAGATCTCTACGCATATGGC 57.142 47.619 22.95 0.00 39.90 4.40
3219 3412 5.880332 GCTTAGGACAGTATTGACCAATTCA 59.120 40.000 9.23 0.00 40.94 2.57
3420 3629 4.954202 TCTAAGGATTTCGGAGTTGCTCTA 59.046 41.667 0.00 0.00 0.00 2.43
3421 3630 3.769844 TCTAAGGATTTCGGAGTTGCTCT 59.230 43.478 0.00 0.00 0.00 4.09
3422 3631 4.116238 CTCTAAGGATTTCGGAGTTGCTC 58.884 47.826 0.00 0.00 0.00 4.26
3423 3632 3.680196 GCTCTAAGGATTTCGGAGTTGCT 60.680 47.826 0.00 0.00 0.00 3.91
3424 3633 2.609916 GCTCTAAGGATTTCGGAGTTGC 59.390 50.000 0.00 0.00 0.00 4.17
3425 3634 3.861840 TGCTCTAAGGATTTCGGAGTTG 58.138 45.455 0.00 0.00 0.00 3.16
3426 3635 4.020128 AGTTGCTCTAAGGATTTCGGAGTT 60.020 41.667 0.00 0.00 0.00 3.01
3427 3636 3.515901 AGTTGCTCTAAGGATTTCGGAGT 59.484 43.478 0.00 0.00 0.00 3.85
3428 3637 4.116238 GAGTTGCTCTAAGGATTTCGGAG 58.884 47.826 0.00 0.00 0.00 4.63
3429 3638 3.118738 GGAGTTGCTCTAAGGATTTCGGA 60.119 47.826 0.00 0.00 0.00 4.55
3430 3639 3.198872 GGAGTTGCTCTAAGGATTTCGG 58.801 50.000 0.00 0.00 0.00 4.30
3431 3640 3.861840 TGGAGTTGCTCTAAGGATTTCG 58.138 45.455 0.00 0.00 0.00 3.46
3432 3641 4.093556 CGTTGGAGTTGCTCTAAGGATTTC 59.906 45.833 8.55 0.00 38.48 2.17
3433 3642 4.003648 CGTTGGAGTTGCTCTAAGGATTT 58.996 43.478 8.55 0.00 38.48 2.17
3546 4163 1.203052 CGCCAGGACAAAAATGCATCT 59.797 47.619 0.00 0.00 0.00 2.90
3599 4216 4.527816 GGGCCAAAATCTATTGATATGCCA 59.472 41.667 4.39 0.00 31.84 4.92
3601 4218 5.726980 TGGGCCAAAATCTATTGATATGC 57.273 39.130 2.13 0.00 31.84 3.14
3612 4229 3.683365 ATGTGAACTTGGGCCAAAATC 57.317 42.857 21.28 19.97 0.00 2.17
3742 4361 6.014584 TGGCAACCAATAGATGTATCGTCTAT 60.015 38.462 5.88 5.88 42.42 1.98
3746 4365 4.415881 TGGCAACCAATAGATGTATCGT 57.584 40.909 0.00 0.00 0.00 3.73
3810 4431 7.118825 CATCAAATGCGTGATTAGGATACTCAT 59.881 37.037 0.00 0.00 40.83 2.90
3816 4437 5.999600 TCATCATCAAATGCGTGATTAGGAT 59.000 36.000 0.00 0.00 36.04 3.24
3820 4441 7.376601 CGAATTTCATCATCAAATGCGTGATTA 59.623 33.333 0.00 0.00 37.46 1.75
3896 8164 3.181490 GGTTTCAGTTTCAGGGTGACAAC 60.181 47.826 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.