Multiple sequence alignment - TraesCS1D01G248800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G248800 chr1D 100.000 2800 0 0 1 2800 341495935 341493136 0.000000e+00 5171.0
1 TraesCS1D01G248800 chr1D 84.727 550 56 21 1224 1764 341478285 341477755 2.470000e-145 525.0
2 TraesCS1D01G248800 chr1D 96.000 50 2 0 564 613 10183740 10183789 6.430000e-12 82.4
3 TraesCS1D01G248800 chr1D 92.982 57 3 1 564 620 88315308 88315253 6.430000e-12 82.4
4 TraesCS1D01G248800 chr1A 90.941 1126 65 13 961 2061 441184743 441183630 0.000000e+00 1480.0
5 TraesCS1D01G248800 chr1A 89.413 699 52 11 1007 1683 589867237 589866539 0.000000e+00 861.0
6 TraesCS1D01G248800 chr1A 88.995 418 16 10 2367 2756 441183333 441182918 9.010000e-135 490.0
7 TraesCS1D01G248800 chr1A 85.451 488 35 22 20 490 441185547 441185079 2.520000e-130 475.0
8 TraesCS1D01G248800 chr1A 82.143 560 69 22 1224 1772 441112904 441112365 4.250000e-123 451.0
9 TraesCS1D01G248800 chr1A 86.713 286 24 5 2047 2331 441183606 441183334 3.500000e-79 305.0
10 TraesCS1D01G248800 chr1A 87.640 178 22 0 998 1175 441113082 441112905 1.020000e-49 207.0
11 TraesCS1D01G248800 chr1A 95.312 64 3 0 2737 2800 441182909 441182846 4.930000e-18 102.0
12 TraesCS1D01G248800 chr1B 92.386 985 50 11 977 1936 457379660 457378676 0.000000e+00 1380.0
13 TraesCS1D01G248800 chr1B 89.474 893 64 11 1936 2800 457378620 457377730 0.000000e+00 1101.0
14 TraesCS1D01G248800 chr1B 87.561 410 29 11 1 403 457380504 457380110 3.290000e-124 455.0
15 TraesCS1D01G248800 chr1B 83.333 114 10 7 2076 2189 457321994 457321890 2.300000e-16 97.1
16 TraesCS1D01G248800 chr1B 96.078 51 2 0 564 614 429603078 429603128 1.790000e-12 84.2
17 TraesCS1D01G248800 chr3A 89.078 412 33 4 1326 1725 31808744 31808333 4.160000e-138 501.0
18 TraesCS1D01G248800 chr3A 93.284 268 18 0 1007 1274 31809343 31809076 2.020000e-106 396.0
19 TraesCS1D01G248800 chr3A 100.000 29 0 0 2603 2631 61433214 61433186 1.000000e-03 54.7
20 TraesCS1D01G248800 chr4B 97.959 49 1 0 564 612 670190874 670190826 4.970000e-13 86.1
21 TraesCS1D01G248800 chr7B 96.000 50 2 0 564 613 433174814 433174863 6.430000e-12 82.4
22 TraesCS1D01G248800 chr7A 96.000 50 2 0 564 613 14373514 14373465 6.430000e-12 82.4
23 TraesCS1D01G248800 chr4D 94.340 53 2 1 564 615 486767982 486767930 2.310000e-11 80.5
24 TraesCS1D01G248800 chr6D 91.379 58 4 1 564 620 400063709 400063766 8.320000e-11 78.7
25 TraesCS1D01G248800 chr6D 89.831 59 5 1 564 622 68334434 68334377 1.080000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G248800 chr1D 341493136 341495935 2799 True 5171.000000 5171 100.0000 1 2800 1 chr1D.!!$R3 2799
1 TraesCS1D01G248800 chr1D 341477755 341478285 530 True 525.000000 525 84.7270 1224 1764 1 chr1D.!!$R2 540
2 TraesCS1D01G248800 chr1A 589866539 589867237 698 True 861.000000 861 89.4130 1007 1683 1 chr1A.!!$R1 676
3 TraesCS1D01G248800 chr1A 441182846 441185547 2701 True 570.400000 1480 89.4824 20 2800 5 chr1A.!!$R3 2780
4 TraesCS1D01G248800 chr1A 441112365 441113082 717 True 329.000000 451 84.8915 998 1772 2 chr1A.!!$R2 774
5 TraesCS1D01G248800 chr1B 457377730 457380504 2774 True 978.666667 1380 89.8070 1 2800 3 chr1B.!!$R2 2799
6 TraesCS1D01G248800 chr3A 31808333 31809343 1010 True 448.500000 501 91.1810 1007 1725 2 chr3A.!!$R2 718


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
883 932 0.10741 TTTCTGCGTGGTTGACTGGT 60.107 50.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2279 2767 0.179004 TTTGCATCCGAGGTGTTGGT 60.179 50.0 0.0 0.0 0.0 3.67 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 71 4.318332 CTGGTAGATCTCAAGTTGCACAA 58.682 43.478 0.00 0.00 0.00 3.33
66 73 4.065088 GGTAGATCTCAAGTTGCACAACA 58.935 43.478 15.40 0.00 43.47 3.33
67 74 4.697352 GGTAGATCTCAAGTTGCACAACAT 59.303 41.667 15.40 0.70 43.47 2.71
89 96 9.562226 AACATATAATGCTATCCTACCTACCTT 57.438 33.333 0.00 0.00 0.00 3.50
90 97 9.562226 ACATATAATGCTATCCTACCTACCTTT 57.438 33.333 0.00 0.00 0.00 3.11
94 101 7.685849 AATGCTATCCTACCTACCTTTGTAA 57.314 36.000 0.00 0.00 0.00 2.41
95 102 6.726490 TGCTATCCTACCTACCTTTGTAAG 57.274 41.667 0.00 0.00 0.00 2.34
96 103 6.200114 TGCTATCCTACCTACCTTTGTAAGT 58.800 40.000 0.00 0.00 0.00 2.24
121 128 1.376609 GGTGCGGCATTTGGGTCTAG 61.377 60.000 5.72 0.00 0.00 2.43
134 142 1.896465 GGGTCTAGAGATGGGATTCCG 59.104 57.143 0.00 0.00 35.24 4.30
135 143 1.896465 GGTCTAGAGATGGGATTCCGG 59.104 57.143 0.00 0.00 35.24 5.14
163 171 2.451167 CCGCGCTCTTCTTGCTCTG 61.451 63.158 5.56 0.00 0.00 3.35
164 172 1.445066 CGCGCTCTTCTTGCTCTGA 60.445 57.895 5.56 0.00 0.00 3.27
165 173 0.805322 CGCGCTCTTCTTGCTCTGAT 60.805 55.000 5.56 0.00 0.00 2.90
166 174 0.929615 GCGCTCTTCTTGCTCTGATC 59.070 55.000 0.00 0.00 0.00 2.92
167 175 1.471327 GCGCTCTTCTTGCTCTGATCT 60.471 52.381 0.00 0.00 0.00 2.75
196 204 1.248785 TTCGAGCGAGCTAGGGTTGT 61.249 55.000 0.00 0.00 0.00 3.32
197 205 1.517257 CGAGCGAGCTAGGGTTGTG 60.517 63.158 0.00 0.00 0.00 3.33
198 206 1.890894 GAGCGAGCTAGGGTTGTGA 59.109 57.895 0.00 0.00 0.00 3.58
262 270 4.082523 CGCGTGGTCTGATGGGGT 62.083 66.667 0.00 0.00 0.00 4.95
263 271 2.125106 GCGTGGTCTGATGGGGTC 60.125 66.667 0.00 0.00 0.00 4.46
279 287 1.735559 GTCGTGTGCCGGGTACTTC 60.736 63.158 16.35 8.53 37.11 3.01
294 310 2.143876 ACTTCGGAATGGATTTGGGG 57.856 50.000 0.00 0.00 0.00 4.96
333 350 2.550180 GAGTGTTTCTTGCCACCTCTTC 59.450 50.000 0.00 0.00 31.88 2.87
399 417 6.605594 TCCCTTTACAAATGAGGCGAAATATT 59.394 34.615 0.00 0.00 0.00 1.28
400 418 7.776030 TCCCTTTACAAATGAGGCGAAATATTA 59.224 33.333 0.00 0.00 0.00 0.98
402 420 7.860872 CCTTTACAAATGAGGCGAAATATTACC 59.139 37.037 0.00 0.00 0.00 2.85
403 421 8.514330 TTTACAAATGAGGCGAAATATTACCT 57.486 30.769 4.67 4.67 34.43 3.08
431 473 7.615757 ACCAAAAATAGAAGAGGAATAACCCTG 59.384 37.037 0.00 0.00 40.05 4.45
467 509 1.538876 AGCAACACCCAGCTCCCTA 60.539 57.895 0.00 0.00 36.00 3.53
468 510 1.377333 GCAACACCCAGCTCCCTAC 60.377 63.158 0.00 0.00 0.00 3.18
472 514 0.693049 ACACCCAGCTCCCTACTTTG 59.307 55.000 0.00 0.00 0.00 2.77
474 516 1.906574 CACCCAGCTCCCTACTTTGTA 59.093 52.381 0.00 0.00 0.00 2.41
475 517 1.907255 ACCCAGCTCCCTACTTTGTAC 59.093 52.381 0.00 0.00 0.00 2.90
477 519 3.245875 ACCCAGCTCCCTACTTTGTACTA 60.246 47.826 0.00 0.00 0.00 1.82
478 520 3.132467 CCCAGCTCCCTACTTTGTACTAC 59.868 52.174 0.00 0.00 0.00 2.73
482 524 3.447944 GCTCCCTACTTTGTACTACTGCT 59.552 47.826 0.00 0.00 0.00 4.24
493 539 8.585881 ACTTTGTACTACTGCTTATCTTCTGAA 58.414 33.333 0.00 0.00 0.00 3.02
494 540 8.988064 TTTGTACTACTGCTTATCTTCTGAAG 57.012 34.615 11.18 11.18 0.00 3.02
495 541 6.565234 TGTACTACTGCTTATCTTCTGAAGC 58.435 40.000 12.54 1.93 46.72 3.86
501 547 4.275838 GCTTATCTTCTGAAGCAGCTTG 57.724 45.455 13.91 0.00 45.99 4.01
502 548 3.937706 GCTTATCTTCTGAAGCAGCTTGA 59.062 43.478 13.91 2.40 45.99 3.02
503 549 4.575645 GCTTATCTTCTGAAGCAGCTTGAT 59.424 41.667 13.91 11.01 45.99 2.57
504 550 5.504337 GCTTATCTTCTGAAGCAGCTTGATG 60.504 44.000 13.91 7.17 45.99 3.07
505 551 2.708051 TCTTCTGAAGCAGCTTGATGG 58.292 47.619 13.91 0.00 0.00 3.51
506 552 2.039480 TCTTCTGAAGCAGCTTGATGGT 59.961 45.455 13.91 0.00 0.00 3.55
507 553 2.105006 TCTGAAGCAGCTTGATGGTC 57.895 50.000 13.91 0.00 0.00 4.02
508 554 0.725686 CTGAAGCAGCTTGATGGTCG 59.274 55.000 13.91 0.00 0.00 4.79
509 555 1.300971 TGAAGCAGCTTGATGGTCGC 61.301 55.000 13.91 0.00 0.00 5.19
510 556 1.300971 GAAGCAGCTTGATGGTCGCA 61.301 55.000 13.91 0.00 0.00 5.10
511 557 1.303799 AAGCAGCTTGATGGTCGCAG 61.304 55.000 6.93 0.00 0.00 5.18
514 560 1.159285 CAGCTTGATGGTCGCAGAAA 58.841 50.000 0.00 0.00 39.69 2.52
515 561 1.536766 CAGCTTGATGGTCGCAGAAAA 59.463 47.619 0.00 0.00 39.69 2.29
517 563 1.135575 GCTTGATGGTCGCAGAAAAGG 60.136 52.381 0.00 0.00 39.69 3.11
521 567 3.218453 TGATGGTCGCAGAAAAGGAAAA 58.782 40.909 0.00 0.00 39.69 2.29
527 573 4.262036 GGTCGCAGAAAAGGAAAAGGAAAT 60.262 41.667 0.00 0.00 39.69 2.17
530 576 6.582672 GTCGCAGAAAAGGAAAAGGAAATAAG 59.417 38.462 0.00 0.00 39.69 1.73
531 577 5.346011 CGCAGAAAAGGAAAAGGAAATAAGC 59.654 40.000 0.00 0.00 0.00 3.09
536 582 8.526978 AGAAAAGGAAAAGGAAATAAGCAGATC 58.473 33.333 0.00 0.00 0.00 2.75
541 587 6.097412 GGAAAAGGAAATAAGCAGATCCATGT 59.903 38.462 0.00 0.00 34.30 3.21
547 593 6.040166 GGAAATAAGCAGATCCATGTTGATGT 59.960 38.462 0.00 0.00 32.08 3.06
548 594 6.630444 AATAAGCAGATCCATGTTGATGTC 57.370 37.500 0.00 0.00 0.00 3.06
552 598 3.064958 GCAGATCCATGTTGATGTCTGTG 59.935 47.826 0.00 0.00 36.08 3.66
553 599 3.626217 CAGATCCATGTTGATGTCTGTGG 59.374 47.826 0.00 0.00 32.06 4.17
554 600 2.495155 TCCATGTTGATGTCTGTGGG 57.505 50.000 0.00 0.00 0.00 4.61
555 601 1.704628 TCCATGTTGATGTCTGTGGGT 59.295 47.619 0.00 0.00 0.00 4.51
556 602 2.909662 TCCATGTTGATGTCTGTGGGTA 59.090 45.455 0.00 0.00 0.00 3.69
557 603 3.055167 TCCATGTTGATGTCTGTGGGTAG 60.055 47.826 0.00 0.00 0.00 3.18
558 604 3.307691 CCATGTTGATGTCTGTGGGTAGT 60.308 47.826 0.00 0.00 0.00 2.73
559 605 4.081142 CCATGTTGATGTCTGTGGGTAGTA 60.081 45.833 0.00 0.00 0.00 1.82
560 606 4.530710 TGTTGATGTCTGTGGGTAGTAC 57.469 45.455 0.00 0.00 0.00 2.73
561 607 4.157246 TGTTGATGTCTGTGGGTAGTACT 58.843 43.478 0.00 0.00 0.00 2.73
562 608 4.219944 TGTTGATGTCTGTGGGTAGTACTC 59.780 45.833 0.00 0.00 0.00 2.59
563 609 4.317530 TGATGTCTGTGGGTAGTACTCT 57.682 45.455 0.00 0.00 0.00 3.24
564 610 5.446260 TGATGTCTGTGGGTAGTACTCTA 57.554 43.478 0.00 0.00 0.00 2.43
565 611 5.191426 TGATGTCTGTGGGTAGTACTCTAC 58.809 45.833 0.00 0.00 44.00 2.59
566 612 4.645863 TGTCTGTGGGTAGTACTCTACA 57.354 45.455 0.00 0.00 45.85 2.74
567 613 4.989277 TGTCTGTGGGTAGTACTCTACAA 58.011 43.478 0.00 0.00 45.85 2.41
568 614 4.763793 TGTCTGTGGGTAGTACTCTACAAC 59.236 45.833 0.00 3.23 45.85 3.32
569 615 5.008980 GTCTGTGGGTAGTACTCTACAACT 58.991 45.833 0.00 0.00 45.85 3.16
570 616 5.476254 GTCTGTGGGTAGTACTCTACAACTT 59.524 44.000 0.00 0.00 45.85 2.66
571 617 6.015603 GTCTGTGGGTAGTACTCTACAACTTT 60.016 42.308 0.00 0.00 45.85 2.66
572 618 6.015688 TCTGTGGGTAGTACTCTACAACTTTG 60.016 42.308 0.00 0.00 45.85 2.77
573 619 5.599656 TGTGGGTAGTACTCTACAACTTTGT 59.400 40.000 0.00 0.00 45.85 2.83
574 620 6.777091 TGTGGGTAGTACTCTACAACTTTGTA 59.223 38.462 0.00 1.97 45.85 2.41
575 621 7.087007 GTGGGTAGTACTCTACAACTTTGTAC 58.913 42.308 0.00 0.00 45.85 2.90
576 622 7.006509 TGGGTAGTACTCTACAACTTTGTACT 58.993 38.462 0.00 0.00 45.85 2.73
577 623 8.163408 TGGGTAGTACTCTACAACTTTGTACTA 58.837 37.037 0.00 0.00 45.85 1.82
578 624 9.014297 GGGTAGTACTCTACAACTTTGTACTAA 57.986 37.037 0.00 0.00 45.85 2.24
584 630 8.535690 ACTCTACAACTTTGTACTAAATCAGC 57.464 34.615 0.00 0.00 42.35 4.26
585 631 7.328737 ACTCTACAACTTTGTACTAAATCAGCG 59.671 37.037 0.00 0.00 42.35 5.18
586 632 7.372714 TCTACAACTTTGTACTAAATCAGCGA 58.627 34.615 0.00 0.00 42.35 4.93
587 633 6.224420 ACAACTTTGTACTAAATCAGCGAC 57.776 37.500 0.00 0.00 40.16 5.19
588 634 5.107607 ACAACTTTGTACTAAATCAGCGACG 60.108 40.000 0.00 0.00 40.16 5.12
589 635 4.801891 ACTTTGTACTAAATCAGCGACGA 58.198 39.130 0.00 0.00 0.00 4.20
590 636 4.857588 ACTTTGTACTAAATCAGCGACGAG 59.142 41.667 0.00 0.00 0.00 4.18
591 637 4.430137 TTGTACTAAATCAGCGACGAGT 57.570 40.909 0.00 0.00 0.00 4.18
592 638 5.550232 TTGTACTAAATCAGCGACGAGTA 57.450 39.130 0.00 0.00 0.00 2.59
593 639 5.550232 TGTACTAAATCAGCGACGAGTAA 57.450 39.130 0.00 0.00 0.00 2.24
594 640 6.127810 TGTACTAAATCAGCGACGAGTAAT 57.872 37.500 0.00 0.00 0.00 1.89
595 641 7.250445 TGTACTAAATCAGCGACGAGTAATA 57.750 36.000 0.00 0.00 0.00 0.98
596 642 7.868775 TGTACTAAATCAGCGACGAGTAATAT 58.131 34.615 0.00 0.00 0.00 1.28
597 643 7.801783 TGTACTAAATCAGCGACGAGTAATATG 59.198 37.037 0.00 0.00 0.00 1.78
598 644 6.150318 ACTAAATCAGCGACGAGTAATATGG 58.850 40.000 0.00 0.00 0.00 2.74
599 645 4.848562 AATCAGCGACGAGTAATATGGA 57.151 40.909 0.00 0.00 0.00 3.41
600 646 3.898517 TCAGCGACGAGTAATATGGAG 57.101 47.619 0.00 0.00 0.00 3.86
601 647 2.031069 TCAGCGACGAGTAATATGGAGC 60.031 50.000 0.00 0.00 0.00 4.70
602 648 1.069159 AGCGACGAGTAATATGGAGCG 60.069 52.381 0.00 0.00 0.00 5.03
603 649 1.965083 CGACGAGTAATATGGAGCGG 58.035 55.000 0.00 0.00 0.00 5.52
604 650 1.534163 CGACGAGTAATATGGAGCGGA 59.466 52.381 0.00 0.00 0.00 5.54
605 651 2.031420 CGACGAGTAATATGGAGCGGAA 60.031 50.000 0.00 0.00 0.00 4.30
606 652 3.566523 GACGAGTAATATGGAGCGGAAG 58.433 50.000 0.00 0.00 0.00 3.46
607 653 2.296471 ACGAGTAATATGGAGCGGAAGG 59.704 50.000 0.00 0.00 0.00 3.46
608 654 2.557056 CGAGTAATATGGAGCGGAAGGA 59.443 50.000 0.00 0.00 0.00 3.36
609 655 3.366476 CGAGTAATATGGAGCGGAAGGAG 60.366 52.174 0.00 0.00 0.00 3.69
612 658 5.334421 AGTAATATGGAGCGGAAGGAGTAT 58.666 41.667 0.00 0.00 0.00 2.12
620 666 3.991121 GAGCGGAAGGAGTATATTCTTGC 59.009 47.826 0.00 0.00 0.00 4.01
625 671 5.506815 CGGAAGGAGTATATTCTTGCGTGTA 60.507 44.000 13.88 0.00 43.71 2.90
627 673 6.929606 GGAAGGAGTATATTCTTGCGTGTATT 59.070 38.462 0.00 0.00 0.00 1.89
630 676 7.497595 AGGAGTATATTCTTGCGTGTATTTGA 58.502 34.615 0.00 0.00 0.00 2.69
631 677 7.438459 AGGAGTATATTCTTGCGTGTATTTGAC 59.562 37.037 0.00 0.00 0.00 3.18
632 678 7.223971 GGAGTATATTCTTGCGTGTATTTGACA 59.776 37.037 0.00 0.00 34.94 3.58
645 691 6.911250 TGTATTTGACACACTCCTTAGAGA 57.089 37.500 0.00 0.00 37.01 3.10
646 692 7.297936 TGTATTTGACACACTCCTTAGAGAA 57.702 36.000 0.00 0.00 37.01 2.87
656 702 4.081198 CACTCCTTAGAGAATGCCAAGACT 60.081 45.833 0.00 0.00 43.39 3.24
657 703 4.534103 ACTCCTTAGAGAATGCCAAGACTT 59.466 41.667 0.00 0.00 43.39 3.01
677 723 7.584987 AGACTTGGAAACTGTATTTTCGATTG 58.415 34.615 0.00 0.00 36.49 2.67
678 724 6.149633 ACTTGGAAACTGTATTTTCGATTGC 58.850 36.000 0.00 0.00 36.49 3.56
697 743 3.011818 TGCTATGTTGTGCAATGAGAGG 58.988 45.455 0.00 0.00 36.15 3.69
699 745 1.843368 ATGTTGTGCAATGAGAGGGG 58.157 50.000 0.00 0.00 0.00 4.79
701 747 1.168714 GTTGTGCAATGAGAGGGGTC 58.831 55.000 0.00 0.00 0.00 4.46
706 752 2.424956 GTGCAATGAGAGGGGTCAATTC 59.575 50.000 0.00 0.00 0.00 2.17
711 757 1.556911 TGAGAGGGGTCAATTCAGAGC 59.443 52.381 0.00 0.00 35.36 4.09
712 758 1.556911 GAGAGGGGTCAATTCAGAGCA 59.443 52.381 0.00 0.00 37.74 4.26
714 760 2.087646 GAGGGGTCAATTCAGAGCAAC 58.912 52.381 0.00 0.00 37.74 4.17
726 772 0.603569 AGAGCAACGTGTGGAGGTAG 59.396 55.000 0.00 0.00 0.00 3.18
728 774 1.004918 GCAACGTGTGGAGGTAGCT 60.005 57.895 0.00 0.00 0.00 3.32
729 775 0.602905 GCAACGTGTGGAGGTAGCTT 60.603 55.000 0.00 0.00 0.00 3.74
730 776 1.429463 CAACGTGTGGAGGTAGCTTC 58.571 55.000 0.00 0.00 0.00 3.86
731 777 1.000955 CAACGTGTGGAGGTAGCTTCT 59.999 52.381 1.12 0.00 0.00 2.85
734 780 2.895404 ACGTGTGGAGGTAGCTTCTAAA 59.105 45.455 1.12 0.00 0.00 1.85
735 781 3.514309 ACGTGTGGAGGTAGCTTCTAAAT 59.486 43.478 1.12 0.00 0.00 1.40
736 782 4.020485 ACGTGTGGAGGTAGCTTCTAAATT 60.020 41.667 1.12 0.00 0.00 1.82
737 783 4.935808 CGTGTGGAGGTAGCTTCTAAATTT 59.064 41.667 1.12 0.00 0.00 1.82
738 784 6.103997 CGTGTGGAGGTAGCTTCTAAATTTA 58.896 40.000 1.12 0.00 0.00 1.40
739 785 6.255887 CGTGTGGAGGTAGCTTCTAAATTTAG 59.744 42.308 17.60 17.60 0.00 1.85
740 786 7.104290 GTGTGGAGGTAGCTTCTAAATTTAGT 58.896 38.462 21.69 7.94 32.61 2.24
741 787 8.255905 GTGTGGAGGTAGCTTCTAAATTTAGTA 58.744 37.037 21.69 13.41 32.61 1.82
742 788 8.989131 TGTGGAGGTAGCTTCTAAATTTAGTAT 58.011 33.333 21.69 10.76 32.61 2.12
763 809 1.452145 TTCTTGGTTTGGCTCCGCAC 61.452 55.000 0.00 0.00 0.00 5.34
788 836 2.030717 ACGAGAATAGACGCAGCTATGG 60.031 50.000 0.00 0.00 31.69 2.74
805 853 1.709578 TGGGTTTTGGTGCAATGCTA 58.290 45.000 6.82 0.00 0.00 3.49
809 857 4.469227 TGGGTTTTGGTGCAATGCTATAAT 59.531 37.500 6.82 0.00 0.00 1.28
820 869 4.774200 GCAATGCTATAATCCTGGGGAAAT 59.226 41.667 0.00 0.00 34.34 2.17
823 872 7.363268 GCAATGCTATAATCCTGGGGAAATTAG 60.363 40.741 0.00 0.00 34.34 1.73
826 875 6.183361 TGCTATAATCCTGGGGAAATTAGCTT 60.183 38.462 17.46 1.41 37.26 3.74
835 884 2.690497 GGGAAATTAGCTTCAGCCTTCC 59.310 50.000 0.00 9.53 43.38 3.46
837 886 3.629855 GGAAATTAGCTTCAGCCTTCCTC 59.370 47.826 0.00 0.00 43.38 3.71
838 887 4.522114 GAAATTAGCTTCAGCCTTCCTCT 58.478 43.478 0.00 0.00 43.38 3.69
839 888 4.582973 AATTAGCTTCAGCCTTCCTCTT 57.417 40.909 0.00 0.00 43.38 2.85
840 889 3.618690 TTAGCTTCAGCCTTCCTCTTC 57.381 47.619 0.00 0.00 43.38 2.87
841 890 1.356124 AGCTTCAGCCTTCCTCTTCA 58.644 50.000 0.00 0.00 43.38 3.02
842 891 1.914798 AGCTTCAGCCTTCCTCTTCAT 59.085 47.619 0.00 0.00 43.38 2.57
843 892 2.093021 AGCTTCAGCCTTCCTCTTCATC 60.093 50.000 0.00 0.00 43.38 2.92
844 893 2.548875 CTTCAGCCTTCCTCTTCATCG 58.451 52.381 0.00 0.00 0.00 3.84
845 894 1.561643 TCAGCCTTCCTCTTCATCGT 58.438 50.000 0.00 0.00 0.00 3.73
846 895 1.478510 TCAGCCTTCCTCTTCATCGTC 59.521 52.381 0.00 0.00 0.00 4.20
847 896 1.480137 CAGCCTTCCTCTTCATCGTCT 59.520 52.381 0.00 0.00 0.00 4.18
849 898 1.478510 GCCTTCCTCTTCATCGTCTGA 59.521 52.381 0.00 0.00 0.00 3.27
850 899 2.102252 GCCTTCCTCTTCATCGTCTGAT 59.898 50.000 0.00 0.00 32.72 2.90
863 912 6.908870 CATCGTCTGATGTCCATCTTTAAA 57.091 37.500 8.61 0.00 45.69 1.52
864 913 7.488187 CATCGTCTGATGTCCATCTTTAAAT 57.512 36.000 8.61 0.00 45.69 1.40
865 914 7.923888 CATCGTCTGATGTCCATCTTTAAATT 58.076 34.615 8.61 0.00 45.69 1.82
866 915 7.921786 TCGTCTGATGTCCATCTTTAAATTT 57.078 32.000 8.61 0.00 38.60 1.82
867 916 7.974675 TCGTCTGATGTCCATCTTTAAATTTC 58.025 34.615 8.61 0.00 38.60 2.17
868 917 7.824289 TCGTCTGATGTCCATCTTTAAATTTCT 59.176 33.333 8.61 0.00 38.60 2.52
869 918 7.907045 CGTCTGATGTCCATCTTTAAATTTCTG 59.093 37.037 8.61 0.00 38.60 3.02
870 919 7.699812 GTCTGATGTCCATCTTTAAATTTCTGC 59.300 37.037 8.61 0.00 38.60 4.26
871 920 6.554419 TGATGTCCATCTTTAAATTTCTGCG 58.446 36.000 8.61 0.00 38.60 5.18
872 921 5.957842 TGTCCATCTTTAAATTTCTGCGT 57.042 34.783 0.00 0.00 0.00 5.24
873 922 5.698832 TGTCCATCTTTAAATTTCTGCGTG 58.301 37.500 0.00 0.00 0.00 5.34
874 923 5.095490 GTCCATCTTTAAATTTCTGCGTGG 58.905 41.667 0.00 0.00 0.00 4.94
875 924 4.764823 TCCATCTTTAAATTTCTGCGTGGT 59.235 37.500 0.00 0.00 0.00 4.16
876 925 5.242838 TCCATCTTTAAATTTCTGCGTGGTT 59.757 36.000 0.00 0.00 0.00 3.67
877 926 5.345741 CCATCTTTAAATTTCTGCGTGGTTG 59.654 40.000 0.00 0.00 0.00 3.77
878 927 5.759506 TCTTTAAATTTCTGCGTGGTTGA 57.240 34.783 0.00 0.00 0.00 3.18
879 928 5.516090 TCTTTAAATTTCTGCGTGGTTGAC 58.484 37.500 0.00 0.00 0.00 3.18
880 929 5.298276 TCTTTAAATTTCTGCGTGGTTGACT 59.702 36.000 0.00 0.00 0.00 3.41
881 930 3.354089 AAATTTCTGCGTGGTTGACTG 57.646 42.857 0.00 0.00 0.00 3.51
882 931 1.238439 ATTTCTGCGTGGTTGACTGG 58.762 50.000 0.00 0.00 0.00 4.00
883 932 0.107410 TTTCTGCGTGGTTGACTGGT 60.107 50.000 0.00 0.00 0.00 4.00
884 933 0.107410 TTCTGCGTGGTTGACTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
885 934 0.813610 TCTGCGTGGTTGACTGGTTG 60.814 55.000 0.00 0.00 0.00 3.77
886 935 1.078072 TGCGTGGTTGACTGGTTGT 60.078 52.632 0.00 0.00 0.00 3.32
887 936 0.178301 TGCGTGGTTGACTGGTTGTA 59.822 50.000 0.00 0.00 0.00 2.41
888 937 0.584876 GCGTGGTTGACTGGTTGTAC 59.415 55.000 0.00 0.00 0.00 2.90
889 938 1.942677 CGTGGTTGACTGGTTGTACA 58.057 50.000 0.00 0.00 0.00 2.90
890 939 2.489971 CGTGGTTGACTGGTTGTACAT 58.510 47.619 0.00 0.00 0.00 2.29
891 940 3.655486 CGTGGTTGACTGGTTGTACATA 58.345 45.455 0.00 0.00 0.00 2.29
892 941 4.059511 CGTGGTTGACTGGTTGTACATAA 58.940 43.478 0.00 0.00 0.00 1.90
893 942 4.512198 CGTGGTTGACTGGTTGTACATAAA 59.488 41.667 0.00 0.00 0.00 1.40
894 943 5.559417 CGTGGTTGACTGGTTGTACATAAAC 60.559 44.000 0.00 0.00 0.00 2.01
895 944 5.529800 GTGGTTGACTGGTTGTACATAAACT 59.470 40.000 0.00 0.00 0.00 2.66
896 945 5.529430 TGGTTGACTGGTTGTACATAAACTG 59.471 40.000 0.00 0.00 0.00 3.16
897 946 5.529800 GGTTGACTGGTTGTACATAAACTGT 59.470 40.000 0.00 0.00 42.13 3.55
898 947 6.293244 GGTTGACTGGTTGTACATAAACTGTC 60.293 42.308 13.04 13.04 42.83 3.51
899 948 5.919755 TGACTGGTTGTACATAAACTGTCA 58.080 37.500 16.81 16.81 46.81 3.58
900 949 6.530120 TGACTGGTTGTACATAAACTGTCAT 58.470 36.000 16.81 0.00 45.29 3.06
901 950 6.649141 TGACTGGTTGTACATAAACTGTCATC 59.351 38.462 16.81 0.00 45.29 2.92
902 951 6.530120 ACTGGTTGTACATAAACTGTCATCA 58.470 36.000 0.00 0.00 39.39 3.07
903 952 6.995686 ACTGGTTGTACATAAACTGTCATCAA 59.004 34.615 0.00 0.00 39.39 2.57
904 953 7.041372 ACTGGTTGTACATAAACTGTCATCAAC 60.041 37.037 0.00 0.00 39.95 3.18
905 954 6.995686 TGGTTGTACATAAACTGTCATCAACT 59.004 34.615 0.00 0.00 40.21 3.16
926 975 3.799281 TTTTTCCACACCTTCAGCTTG 57.201 42.857 0.00 0.00 0.00 4.01
935 984 3.134804 ACACCTTCAGCTTGTCTACTGTT 59.865 43.478 0.00 0.00 35.37 3.16
937 986 4.576463 CACCTTCAGCTTGTCTACTGTTTT 59.424 41.667 0.00 0.00 35.37 2.43
944 993 6.040504 TCAGCTTGTCTACTGTTTTCTCTACA 59.959 38.462 0.00 0.00 35.37 2.74
945 994 6.364706 CAGCTTGTCTACTGTTTTCTCTACAG 59.635 42.308 0.00 0.00 46.56 2.74
947 996 6.924060 GCTTGTCTACTGTTTTCTCTACAGAA 59.076 38.462 9.74 0.00 44.52 3.02
948 997 7.438459 GCTTGTCTACTGTTTTCTCTACAGAAA 59.562 37.037 9.74 0.00 45.30 2.52
975 1024 9.846248 ATCTTGTTGATTAATAACTTGCTTCAC 57.154 29.630 0.00 0.00 29.59 3.18
979 1030 8.637986 TGTTGATTAATAACTTGCTTCACCTTT 58.362 29.630 0.00 0.00 0.00 3.11
985 1036 3.990318 ACTTGCTTCACCTTTTACAGC 57.010 42.857 0.00 0.00 0.00 4.40
1170 1221 9.658799 CAGAAGAATGAAGAATTACTAGGTTCA 57.341 33.333 0.00 0.00 0.00 3.18
1186 1237 7.119387 ACTAGGTTCAAATGGAATAAAGGAGG 58.881 38.462 0.00 0.00 37.93 4.30
1188 1239 4.466015 GGTTCAAATGGAATAAAGGAGGCA 59.534 41.667 0.00 0.00 37.93 4.75
1189 1240 5.394553 GGTTCAAATGGAATAAAGGAGGCAG 60.395 44.000 0.00 0.00 37.93 4.85
1404 1736 2.229543 TGCTGCCAAATTCACAGATGAC 59.770 45.455 0.00 0.00 33.38 3.06
1423 1767 1.349259 CGCGTAAGTACCCACTGCAC 61.349 60.000 0.00 0.00 41.68 4.57
1424 1768 1.349259 GCGTAAGTACCCACTGCACG 61.349 60.000 7.46 7.46 42.56 5.34
1453 1807 9.586150 GAATTCAGCTGTATTTTGTGTATATCG 57.414 33.333 18.26 0.00 0.00 2.92
1523 1892 6.346838 GCAGGTTTTTCAACAATGCATTCTAC 60.347 38.462 9.53 0.00 42.53 2.59
1542 1915 0.676736 CGCTAGAGTGGGAGGAATCC 59.323 60.000 0.00 0.00 0.00 3.01
1580 1953 3.745799 TCGGCTTGAACTGGATTTGTTA 58.254 40.909 0.00 0.00 0.00 2.41
1619 1992 3.246619 GCTGAAAGTGAACCTAGAGACG 58.753 50.000 0.00 0.00 35.30 4.18
1692 2067 0.321653 ACTGCCGGTTCAGGTTCATC 60.322 55.000 12.92 0.00 38.36 2.92
1726 2107 8.432013 TGGATCTAAAGATTTGAGCTATAGCAA 58.568 33.333 26.07 12.52 38.04 3.91
1730 2111 5.747951 AAGATTTGAGCTATAGCAACAGC 57.252 39.130 26.07 16.24 45.16 4.40
1877 2267 8.976986 AATTCTTTTAGATCTGACATTTGTGC 57.023 30.769 5.18 0.00 0.00 4.57
1903 2293 7.509141 TTCAGATTGCATTAAGTTGTTCTGA 57.491 32.000 0.00 0.00 37.25 3.27
1934 2380 5.784177 TGATTAGTAGGGATTCGATTCTGC 58.216 41.667 7.21 0.00 0.00 4.26
1942 2388 4.878397 AGGGATTCGATTCTGCTTTACTTG 59.122 41.667 7.21 0.00 0.00 3.16
2016 2462 1.780309 TGGGAAACACCAGGTCTGAAT 59.220 47.619 0.00 0.00 41.20 2.57
2051 2537 0.108851 GATTCCAATGCCGCGGTTTT 60.109 50.000 28.70 17.68 0.00 2.43
2119 2606 1.918262 TCCAAGATCTGTGAATGGCCT 59.082 47.619 3.32 0.00 0.00 5.19
2120 2607 2.022195 CCAAGATCTGTGAATGGCCTG 58.978 52.381 3.32 0.00 0.00 4.85
2126 2613 0.518636 CTGTGAATGGCCTGTGTTCG 59.481 55.000 3.32 0.00 0.00 3.95
2149 2636 4.813750 TCTCTGTGCATCTTCTGATTCA 57.186 40.909 0.00 0.00 0.00 2.57
2170 2658 3.308053 CAGTTGAGTCGCATAACAGGATG 59.692 47.826 0.00 0.00 46.00 3.51
2244 2732 7.692460 TTACTTTCCTGAACACGAGACTATA 57.308 36.000 0.00 0.00 0.00 1.31
2247 2735 4.978083 TCCTGAACACGAGACTATAACC 57.022 45.455 0.00 0.00 0.00 2.85
2253 2741 2.681848 ACACGAGACTATAACCACGAGG 59.318 50.000 0.00 0.00 42.21 4.63
2263 2751 4.873129 CCACGAGGGACATCGCCG 62.873 72.222 6.27 0.00 46.60 6.46
2279 2767 1.069296 CGCCGAAGCATGAAAACAGAA 60.069 47.619 0.00 0.00 39.83 3.02
2285 2773 4.681744 GAAGCATGAAAACAGAACCAACA 58.318 39.130 0.00 0.00 0.00 3.33
2290 2778 2.680841 TGAAAACAGAACCAACACCTCG 59.319 45.455 0.00 0.00 0.00 4.63
2297 2785 0.179004 AACCAACACCTCGGATGCAA 60.179 50.000 0.00 0.00 0.00 4.08
2302 2790 2.198827 ACACCTCGGATGCAAATTCA 57.801 45.000 0.00 0.00 0.00 2.57
2355 2843 7.558161 TCATTCGAAACAGATGCTATGAAAT 57.442 32.000 0.00 0.00 0.00 2.17
2357 2845 6.983474 TTCGAAACAGATGCTATGAAATGA 57.017 33.333 0.00 0.00 0.00 2.57
2363 2851 5.748402 ACAGATGCTATGAAATGACTGGAA 58.252 37.500 0.00 0.00 0.00 3.53
2488 2994 9.651913 TGTTTTTCTGTCAGCTTTAAATTTCTT 57.348 25.926 0.00 0.00 0.00 2.52
2560 3066 1.202580 AGTTGATATCTGGGCAGTCGC 60.203 52.381 3.98 0.00 37.44 5.19
2638 3144 5.303078 CGATCCATATTAATCGAGAGGGGAT 59.697 44.000 9.80 0.00 45.83 3.85
2689 3208 3.454858 TCCTATGCTTCTCCTCCACTTT 58.545 45.455 0.00 0.00 0.00 2.66
2697 3216 4.775236 CTTCTCCTCCACTTTTCCTATGG 58.225 47.826 0.00 0.00 34.58 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.568956 TGCAACTTGAGATCTACCAGCT 59.431 45.455 0.00 0.00 0.00 4.24
64 71 9.562226 AAAGGTAGGTAGGATAGCATTATATGT 57.438 33.333 0.00 0.00 42.67 2.29
66 73 9.562226 ACAAAGGTAGGTAGGATAGCATTATAT 57.438 33.333 0.00 0.00 42.67 0.86
67 74 8.967779 ACAAAGGTAGGTAGGATAGCATTATA 57.032 34.615 0.00 0.00 42.67 0.98
89 96 1.134907 GCCGCACCTAGCTACTTACAA 60.135 52.381 0.00 0.00 42.61 2.41
90 97 0.458669 GCCGCACCTAGCTACTTACA 59.541 55.000 0.00 0.00 42.61 2.41
94 101 0.541863 AAATGCCGCACCTAGCTACT 59.458 50.000 0.00 0.00 42.61 2.57
95 102 0.657840 CAAATGCCGCACCTAGCTAC 59.342 55.000 0.00 0.00 42.61 3.58
96 103 0.463654 CCAAATGCCGCACCTAGCTA 60.464 55.000 0.00 0.00 42.61 3.32
121 128 2.432123 GGGCCGGAATCCCATCTC 59.568 66.667 5.05 0.00 43.37 2.75
148 156 2.099592 AGAGATCAGAGCAAGAAGAGCG 59.900 50.000 0.00 0.00 37.01 5.03
151 159 5.202765 AGATGAGAGATCAGAGCAAGAAGA 58.797 41.667 0.00 0.00 0.00 2.87
196 204 3.074369 TGCGCTCCTTCGGGATCA 61.074 61.111 9.73 0.00 44.11 2.92
197 205 2.279784 CTGCGCTCCTTCGGGATC 60.280 66.667 9.73 0.00 44.11 3.36
198 206 3.854669 CCTGCGCTCCTTCGGGAT 61.855 66.667 9.73 0.00 44.11 3.85
263 271 2.807895 CGAAGTACCCGGCACACG 60.808 66.667 0.00 2.97 43.80 4.49
273 281 2.949644 CCCCAAATCCATTCCGAAGTAC 59.050 50.000 0.00 0.00 0.00 2.73
279 287 1.381056 TGCCCCCAAATCCATTCCG 60.381 57.895 0.00 0.00 0.00 4.30
282 290 0.979187 CAGCTGCCCCCAAATCCATT 60.979 55.000 0.00 0.00 0.00 3.16
283 299 1.382146 CAGCTGCCCCCAAATCCAT 60.382 57.895 0.00 0.00 0.00 3.41
294 310 2.119655 CCTTCCTGATGCAGCTGCC 61.120 63.158 34.64 21.13 41.18 4.85
382 400 7.012894 TGGTAAGGTAATATTTCGCCTCATTTG 59.987 37.037 0.00 0.00 0.00 2.32
403 421 9.470399 GGGTTATTCCTCTTCTATTTTTGGTAA 57.530 33.333 0.00 0.00 36.25 2.85
463 505 7.349412 AGATAAGCAGTAGTACAAAGTAGGG 57.651 40.000 2.52 0.00 0.00 3.53
465 507 9.509855 CAGAAGATAAGCAGTAGTACAAAGTAG 57.490 37.037 2.52 0.00 0.00 2.57
467 509 8.123639 TCAGAAGATAAGCAGTAGTACAAAGT 57.876 34.615 2.52 0.00 0.00 2.66
468 510 8.988064 TTCAGAAGATAAGCAGTAGTACAAAG 57.012 34.615 2.52 0.00 0.00 2.77
482 524 4.880120 CCATCAAGCTGCTTCAGAAGATAA 59.120 41.667 12.82 0.00 32.44 1.75
493 539 1.744368 CTGCGACCATCAAGCTGCT 60.744 57.895 0.00 0.00 0.00 4.24
494 540 1.300971 TTCTGCGACCATCAAGCTGC 61.301 55.000 0.00 0.00 0.00 5.25
495 541 1.159285 TTTCTGCGACCATCAAGCTG 58.841 50.000 0.00 0.00 0.00 4.24
496 542 1.808945 CTTTTCTGCGACCATCAAGCT 59.191 47.619 0.00 0.00 0.00 3.74
497 543 1.135575 CCTTTTCTGCGACCATCAAGC 60.136 52.381 0.00 0.00 0.00 4.01
498 544 2.426522 TCCTTTTCTGCGACCATCAAG 58.573 47.619 0.00 0.00 0.00 3.02
499 545 2.559698 TCCTTTTCTGCGACCATCAA 57.440 45.000 0.00 0.00 0.00 2.57
500 546 2.559698 TTCCTTTTCTGCGACCATCA 57.440 45.000 0.00 0.00 0.00 3.07
501 547 3.366374 CCTTTTCCTTTTCTGCGACCATC 60.366 47.826 0.00 0.00 0.00 3.51
502 548 2.558359 CCTTTTCCTTTTCTGCGACCAT 59.442 45.455 0.00 0.00 0.00 3.55
503 549 1.953686 CCTTTTCCTTTTCTGCGACCA 59.046 47.619 0.00 0.00 0.00 4.02
504 550 2.227194 TCCTTTTCCTTTTCTGCGACC 58.773 47.619 0.00 0.00 0.00 4.79
505 551 3.982576 TTCCTTTTCCTTTTCTGCGAC 57.017 42.857 0.00 0.00 0.00 5.19
506 552 6.642707 TTATTTCCTTTTCCTTTTCTGCGA 57.357 33.333 0.00 0.00 0.00 5.10
507 553 5.346011 GCTTATTTCCTTTTCCTTTTCTGCG 59.654 40.000 0.00 0.00 0.00 5.18
508 554 6.223120 TGCTTATTTCCTTTTCCTTTTCTGC 58.777 36.000 0.00 0.00 0.00 4.26
509 555 7.661040 TCTGCTTATTTCCTTTTCCTTTTCTG 58.339 34.615 0.00 0.00 0.00 3.02
510 556 7.839680 TCTGCTTATTTCCTTTTCCTTTTCT 57.160 32.000 0.00 0.00 0.00 2.52
511 557 7.761704 GGATCTGCTTATTTCCTTTTCCTTTTC 59.238 37.037 0.00 0.00 0.00 2.29
514 560 6.256053 TGGATCTGCTTATTTCCTTTTCCTT 58.744 36.000 0.00 0.00 0.00 3.36
515 561 5.831103 TGGATCTGCTTATTTCCTTTTCCT 58.169 37.500 0.00 0.00 0.00 3.36
517 563 7.105241 ACATGGATCTGCTTATTTCCTTTTC 57.895 36.000 0.00 0.00 0.00 2.29
521 567 5.759059 TCAACATGGATCTGCTTATTTCCT 58.241 37.500 0.00 0.00 0.00 3.36
527 573 5.121105 CAGACATCAACATGGATCTGCTTA 58.879 41.667 0.00 0.00 30.46 3.09
530 576 3.064958 CACAGACATCAACATGGATCTGC 59.935 47.826 0.00 0.00 36.94 4.26
531 577 3.626217 CCACAGACATCAACATGGATCTG 59.374 47.826 0.00 3.42 38.36 2.90
536 582 2.205022 ACCCACAGACATCAACATGG 57.795 50.000 0.00 0.00 33.82 3.66
541 587 4.673968 AGAGTACTACCCACAGACATCAA 58.326 43.478 0.00 0.00 0.00 2.57
547 593 5.252586 AGTTGTAGAGTACTACCCACAGA 57.747 43.478 0.00 0.00 45.81 3.41
548 594 5.979288 AAGTTGTAGAGTACTACCCACAG 57.021 43.478 0.00 0.00 45.81 3.66
552 598 7.459795 AGTACAAAGTTGTAGAGTACTACCC 57.540 40.000 4.14 0.00 45.81 3.69
558 604 9.635520 GCTGATTTAGTACAAAGTTGTAGAGTA 57.364 33.333 4.14 0.00 43.67 2.59
559 605 7.328737 CGCTGATTTAGTACAAAGTTGTAGAGT 59.671 37.037 4.14 0.00 43.67 3.24
560 606 7.541091 TCGCTGATTTAGTACAAAGTTGTAGAG 59.459 37.037 4.14 0.00 43.67 2.43
561 607 7.327761 GTCGCTGATTTAGTACAAAGTTGTAGA 59.672 37.037 4.14 0.00 43.67 2.59
562 608 7.445836 GTCGCTGATTTAGTACAAAGTTGTAG 58.554 38.462 4.14 0.00 43.67 2.74
563 609 6.088483 CGTCGCTGATTTAGTACAAAGTTGTA 59.912 38.462 0.00 0.00 42.35 2.41
564 610 5.107607 CGTCGCTGATTTAGTACAAAGTTGT 60.108 40.000 1.75 1.75 44.86 3.32
565 611 5.118050 TCGTCGCTGATTTAGTACAAAGTTG 59.882 40.000 0.00 0.00 0.00 3.16
566 612 5.224888 TCGTCGCTGATTTAGTACAAAGTT 58.775 37.500 0.00 0.00 0.00 2.66
567 613 4.801891 TCGTCGCTGATTTAGTACAAAGT 58.198 39.130 0.00 0.00 0.00 2.66
568 614 4.857588 ACTCGTCGCTGATTTAGTACAAAG 59.142 41.667 0.00 0.00 0.00 2.77
569 615 4.801891 ACTCGTCGCTGATTTAGTACAAA 58.198 39.130 0.00 0.00 0.00 2.83
570 616 4.430137 ACTCGTCGCTGATTTAGTACAA 57.570 40.909 0.00 0.00 0.00 2.41
571 617 5.550232 TTACTCGTCGCTGATTTAGTACA 57.450 39.130 0.00 0.00 0.00 2.90
572 618 7.270793 CCATATTACTCGTCGCTGATTTAGTAC 59.729 40.741 0.00 0.00 0.00 2.73
573 619 7.173735 TCCATATTACTCGTCGCTGATTTAGTA 59.826 37.037 0.00 0.00 0.00 1.82
574 620 6.016527 TCCATATTACTCGTCGCTGATTTAGT 60.017 38.462 0.00 0.00 0.00 2.24
575 621 6.379386 TCCATATTACTCGTCGCTGATTTAG 58.621 40.000 0.00 0.00 0.00 1.85
576 622 6.321848 TCCATATTACTCGTCGCTGATTTA 57.678 37.500 0.00 0.00 0.00 1.40
577 623 5.196341 TCCATATTACTCGTCGCTGATTT 57.804 39.130 0.00 0.00 0.00 2.17
578 624 4.799678 CTCCATATTACTCGTCGCTGATT 58.200 43.478 0.00 0.00 0.00 2.57
579 625 3.366476 GCTCCATATTACTCGTCGCTGAT 60.366 47.826 0.00 0.00 0.00 2.90
580 626 2.031069 GCTCCATATTACTCGTCGCTGA 60.031 50.000 0.00 0.00 0.00 4.26
581 627 2.320367 GCTCCATATTACTCGTCGCTG 58.680 52.381 0.00 0.00 0.00 5.18
582 628 1.069159 CGCTCCATATTACTCGTCGCT 60.069 52.381 0.00 0.00 0.00 4.93
583 629 1.328439 CGCTCCATATTACTCGTCGC 58.672 55.000 0.00 0.00 0.00 5.19
584 630 1.534163 TCCGCTCCATATTACTCGTCG 59.466 52.381 0.00 0.00 0.00 5.12
585 631 3.566523 CTTCCGCTCCATATTACTCGTC 58.433 50.000 0.00 0.00 0.00 4.20
586 632 2.296471 CCTTCCGCTCCATATTACTCGT 59.704 50.000 0.00 0.00 0.00 4.18
587 633 2.557056 TCCTTCCGCTCCATATTACTCG 59.443 50.000 0.00 0.00 0.00 4.18
588 634 3.574826 ACTCCTTCCGCTCCATATTACTC 59.425 47.826 0.00 0.00 0.00 2.59
589 635 3.577919 ACTCCTTCCGCTCCATATTACT 58.422 45.455 0.00 0.00 0.00 2.24
590 636 5.662674 ATACTCCTTCCGCTCCATATTAC 57.337 43.478 0.00 0.00 0.00 1.89
591 637 7.839705 AGAATATACTCCTTCCGCTCCATATTA 59.160 37.037 0.00 0.00 0.00 0.98
592 638 6.670027 AGAATATACTCCTTCCGCTCCATATT 59.330 38.462 0.00 0.00 0.00 1.28
593 639 6.198639 AGAATATACTCCTTCCGCTCCATAT 58.801 40.000 0.00 0.00 0.00 1.78
594 640 5.580998 AGAATATACTCCTTCCGCTCCATA 58.419 41.667 0.00 0.00 0.00 2.74
595 641 4.421131 AGAATATACTCCTTCCGCTCCAT 58.579 43.478 0.00 0.00 0.00 3.41
596 642 3.845860 AGAATATACTCCTTCCGCTCCA 58.154 45.455 0.00 0.00 0.00 3.86
597 643 4.561105 CAAGAATATACTCCTTCCGCTCC 58.439 47.826 0.00 0.00 0.00 4.70
598 644 3.991121 GCAAGAATATACTCCTTCCGCTC 59.009 47.826 0.00 0.00 0.00 5.03
599 645 3.553096 CGCAAGAATATACTCCTTCCGCT 60.553 47.826 0.00 0.00 43.02 5.52
600 646 2.731976 CGCAAGAATATACTCCTTCCGC 59.268 50.000 0.00 0.00 43.02 5.54
601 647 3.736252 CACGCAAGAATATACTCCTTCCG 59.264 47.826 0.00 0.00 43.62 4.30
602 648 4.694339 ACACGCAAGAATATACTCCTTCC 58.306 43.478 0.00 0.00 43.62 3.46
603 649 7.948278 AATACACGCAAGAATATACTCCTTC 57.052 36.000 0.00 0.00 43.62 3.46
604 650 7.985184 TCAAATACACGCAAGAATATACTCCTT 59.015 33.333 0.00 0.00 43.62 3.36
605 651 7.438459 GTCAAATACACGCAAGAATATACTCCT 59.562 37.037 0.00 0.00 43.62 3.69
606 652 7.223971 TGTCAAATACACGCAAGAATATACTCC 59.776 37.037 0.00 0.00 43.62 3.85
607 653 8.126871 TGTCAAATACACGCAAGAATATACTC 57.873 34.615 0.00 0.00 43.62 2.59
625 671 5.645497 GCATTCTCTAAGGAGTGTGTCAAAT 59.355 40.000 0.00 0.00 40.29 2.32
627 673 4.563580 GGCATTCTCTAAGGAGTGTGTCAA 60.564 45.833 0.00 0.00 40.29 3.18
630 676 2.906389 TGGCATTCTCTAAGGAGTGTGT 59.094 45.455 0.00 0.00 40.29 3.72
631 677 3.616956 TGGCATTCTCTAAGGAGTGTG 57.383 47.619 0.00 0.00 40.29 3.82
632 678 3.840666 TCTTGGCATTCTCTAAGGAGTGT 59.159 43.478 0.00 0.00 40.29 3.55
633 679 4.081198 AGTCTTGGCATTCTCTAAGGAGTG 60.081 45.833 0.00 0.00 40.29 3.51
634 680 4.100373 AGTCTTGGCATTCTCTAAGGAGT 58.900 43.478 0.00 0.00 40.29 3.85
635 681 4.751767 AGTCTTGGCATTCTCTAAGGAG 57.248 45.455 0.00 0.00 40.73 3.69
636 682 4.323792 CCAAGTCTTGGCATTCTCTAAGGA 60.324 45.833 18.66 0.00 45.17 3.36
637 683 3.944015 CCAAGTCTTGGCATTCTCTAAGG 59.056 47.826 18.66 0.00 45.17 2.69
656 702 6.325919 AGCAATCGAAAATACAGTTTCCAA 57.674 33.333 0.00 0.00 34.59 3.53
657 703 5.957842 AGCAATCGAAAATACAGTTTCCA 57.042 34.783 0.00 0.00 34.59 3.53
677 723 2.357009 CCCTCTCATTGCACAACATAGC 59.643 50.000 0.00 0.00 0.00 2.97
678 724 2.947652 CCCCTCTCATTGCACAACATAG 59.052 50.000 0.00 0.00 0.00 2.23
697 743 1.197721 CACGTTGCTCTGAATTGACCC 59.802 52.381 0.00 0.00 0.00 4.46
699 745 2.349817 CCACACGTTGCTCTGAATTGAC 60.350 50.000 0.00 0.00 0.00 3.18
701 747 1.872952 TCCACACGTTGCTCTGAATTG 59.127 47.619 0.00 0.00 0.00 2.32
706 752 0.317160 TACCTCCACACGTTGCTCTG 59.683 55.000 0.00 0.00 0.00 3.35
711 757 1.000955 AGAAGCTACCTCCACACGTTG 59.999 52.381 0.00 0.00 0.00 4.10
712 758 1.339097 AGAAGCTACCTCCACACGTT 58.661 50.000 0.00 0.00 0.00 3.99
714 760 3.587797 TTTAGAAGCTACCTCCACACG 57.412 47.619 0.00 0.00 0.00 4.49
734 780 7.228706 CGGAGCCAAACCAAGAATATACTAAAT 59.771 37.037 0.00 0.00 0.00 1.40
735 781 6.540914 CGGAGCCAAACCAAGAATATACTAAA 59.459 38.462 0.00 0.00 0.00 1.85
736 782 6.053005 CGGAGCCAAACCAAGAATATACTAA 58.947 40.000 0.00 0.00 0.00 2.24
737 783 5.607477 CGGAGCCAAACCAAGAATATACTA 58.393 41.667 0.00 0.00 0.00 1.82
738 784 4.451900 CGGAGCCAAACCAAGAATATACT 58.548 43.478 0.00 0.00 0.00 2.12
739 785 4.813296 CGGAGCCAAACCAAGAATATAC 57.187 45.455 0.00 0.00 0.00 1.47
763 809 2.033550 AGCTGCGTCTATTCTCGTAAGG 59.966 50.000 0.00 0.00 38.47 2.69
788 836 5.049828 GGATTATAGCATTGCACCAAAACC 58.950 41.667 11.91 4.35 0.00 3.27
805 853 6.279813 TGAAGCTAATTTCCCCAGGATTAT 57.720 37.500 0.00 0.00 0.00 1.28
809 857 2.357154 GCTGAAGCTAATTTCCCCAGGA 60.357 50.000 0.00 0.00 38.21 3.86
820 869 2.906389 TGAAGAGGAAGGCTGAAGCTAA 59.094 45.455 1.74 0.00 41.70 3.09
823 872 2.287769 GATGAAGAGGAAGGCTGAAGC 58.712 52.381 0.00 0.00 41.14 3.86
826 875 1.478510 GACGATGAAGAGGAAGGCTGA 59.521 52.381 0.00 0.00 0.00 4.26
841 890 8.511604 AAATTTAAAGATGGACATCAGACGAT 57.488 30.769 14.16 1.11 40.22 3.73
842 891 7.824289 AGAAATTTAAAGATGGACATCAGACGA 59.176 33.333 14.16 0.00 40.22 4.20
843 892 7.907045 CAGAAATTTAAAGATGGACATCAGACG 59.093 37.037 14.16 0.00 40.22 4.18
844 893 7.699812 GCAGAAATTTAAAGATGGACATCAGAC 59.300 37.037 14.16 0.00 40.22 3.51
845 894 7.414429 CGCAGAAATTTAAAGATGGACATCAGA 60.414 37.037 14.16 0.00 40.22 3.27
846 895 6.690098 CGCAGAAATTTAAAGATGGACATCAG 59.310 38.462 14.16 0.00 40.22 2.90
847 896 6.150976 ACGCAGAAATTTAAAGATGGACATCA 59.849 34.615 14.16 0.00 40.22 3.07
849 898 6.324819 CACGCAGAAATTTAAAGATGGACAT 58.675 36.000 0.00 0.00 0.00 3.06
850 899 5.335583 CCACGCAGAAATTTAAAGATGGACA 60.336 40.000 0.00 0.00 0.00 4.02
851 900 5.095490 CCACGCAGAAATTTAAAGATGGAC 58.905 41.667 0.00 0.00 0.00 4.02
852 901 4.764823 ACCACGCAGAAATTTAAAGATGGA 59.235 37.500 14.13 0.00 0.00 3.41
853 902 5.059404 ACCACGCAGAAATTTAAAGATGG 57.941 39.130 8.13 8.13 0.00 3.51
854 903 6.088085 GTCAACCACGCAGAAATTTAAAGATG 59.912 38.462 0.00 0.00 0.00 2.90
855 904 6.016276 AGTCAACCACGCAGAAATTTAAAGAT 60.016 34.615 0.00 0.00 0.00 2.40
857 906 5.399301 CAGTCAACCACGCAGAAATTTAAAG 59.601 40.000 0.00 0.00 0.00 1.85
859 908 4.261405 CCAGTCAACCACGCAGAAATTTAA 60.261 41.667 0.00 0.00 0.00 1.52
860 909 3.252215 CCAGTCAACCACGCAGAAATTTA 59.748 43.478 0.00 0.00 0.00 1.40
861 910 2.034558 CCAGTCAACCACGCAGAAATTT 59.965 45.455 0.00 0.00 0.00 1.82
862 911 1.608590 CCAGTCAACCACGCAGAAATT 59.391 47.619 0.00 0.00 0.00 1.82
863 912 1.238439 CCAGTCAACCACGCAGAAAT 58.762 50.000 0.00 0.00 0.00 2.17
864 913 0.107410 ACCAGTCAACCACGCAGAAA 60.107 50.000 0.00 0.00 0.00 2.52
865 914 0.107410 AACCAGTCAACCACGCAGAA 60.107 50.000 0.00 0.00 0.00 3.02
866 915 0.813610 CAACCAGTCAACCACGCAGA 60.814 55.000 0.00 0.00 0.00 4.26
867 916 1.095228 ACAACCAGTCAACCACGCAG 61.095 55.000 0.00 0.00 0.00 5.18
868 917 0.178301 TACAACCAGTCAACCACGCA 59.822 50.000 0.00 0.00 0.00 5.24
869 918 0.584876 GTACAACCAGTCAACCACGC 59.415 55.000 0.00 0.00 0.00 5.34
870 919 1.942677 TGTACAACCAGTCAACCACG 58.057 50.000 0.00 0.00 0.00 4.94
871 920 5.529800 AGTTTATGTACAACCAGTCAACCAC 59.470 40.000 0.00 0.00 0.00 4.16
872 921 5.529430 CAGTTTATGTACAACCAGTCAACCA 59.471 40.000 0.00 0.00 0.00 3.67
873 922 5.529800 ACAGTTTATGTACAACCAGTCAACC 59.470 40.000 0.00 0.00 41.60 3.77
874 923 6.259167 TGACAGTTTATGTACAACCAGTCAAC 59.741 38.462 14.66 2.47 44.17 3.18
875 924 6.350103 TGACAGTTTATGTACAACCAGTCAA 58.650 36.000 14.66 4.74 44.17 3.18
876 925 5.919755 TGACAGTTTATGTACAACCAGTCA 58.080 37.500 13.69 13.69 44.17 3.41
877 926 6.649141 TGATGACAGTTTATGTACAACCAGTC 59.351 38.462 0.00 6.10 44.17 3.51
878 927 6.530120 TGATGACAGTTTATGTACAACCAGT 58.470 36.000 0.00 0.00 44.17 4.00
879 928 7.173218 AGTTGATGACAGTTTATGTACAACCAG 59.827 37.037 0.00 0.00 44.17 4.00
880 929 6.995686 AGTTGATGACAGTTTATGTACAACCA 59.004 34.615 0.00 0.00 44.17 3.67
881 930 7.435068 AGTTGATGACAGTTTATGTACAACC 57.565 36.000 0.00 0.00 44.17 3.77
882 931 9.730420 AAAAGTTGATGACAGTTTATGTACAAC 57.270 29.630 0.00 0.00 44.17 3.32
910 959 1.131638 AGACAAGCTGAAGGTGTGGA 58.868 50.000 0.00 0.00 0.00 4.02
914 963 3.393089 ACAGTAGACAAGCTGAAGGTG 57.607 47.619 0.00 0.00 36.62 4.00
922 971 6.448006 TCTGTAGAGAAAACAGTAGACAAGC 58.552 40.000 3.40 0.00 43.88 4.01
923 972 8.873215 TTTCTGTAGAGAAAACAGTAGACAAG 57.127 34.615 12.35 0.00 43.79 3.16
949 998 9.846248 GTGAAGCAAGTTATTAATCAACAAGAT 57.154 29.630 0.00 0.00 39.09 2.40
950 999 8.296713 GGTGAAGCAAGTTATTAATCAACAAGA 58.703 33.333 0.00 0.00 0.00 3.02
951 1000 8.299570 AGGTGAAGCAAGTTATTAATCAACAAG 58.700 33.333 0.00 0.00 0.00 3.16
954 1003 9.476202 AAAAGGTGAAGCAAGTTATTAATCAAC 57.524 29.630 0.00 0.00 0.00 3.18
960 1009 7.229707 TGCTGTAAAAGGTGAAGCAAGTTATTA 59.770 33.333 0.00 0.00 40.72 0.98
962 1011 5.534654 TGCTGTAAAAGGTGAAGCAAGTTAT 59.465 36.000 0.00 0.00 40.72 1.89
963 1012 4.884744 TGCTGTAAAAGGTGAAGCAAGTTA 59.115 37.500 0.00 0.00 40.72 2.24
965 1014 3.066760 GTGCTGTAAAAGGTGAAGCAAGT 59.933 43.478 0.00 0.00 44.82 3.16
966 1015 3.316308 AGTGCTGTAAAAGGTGAAGCAAG 59.684 43.478 0.00 0.00 44.82 4.01
967 1016 3.287222 AGTGCTGTAAAAGGTGAAGCAA 58.713 40.909 0.00 0.00 44.82 3.91
969 1018 3.990318 AAGTGCTGTAAAAGGTGAAGC 57.010 42.857 0.00 0.00 0.00 3.86
972 1021 5.700832 CAGACATAAGTGCTGTAAAAGGTGA 59.299 40.000 0.00 0.00 0.00 4.02
973 1022 5.617751 GCAGACATAAGTGCTGTAAAAGGTG 60.618 44.000 0.00 0.00 36.71 4.00
974 1023 4.455877 GCAGACATAAGTGCTGTAAAAGGT 59.544 41.667 0.00 0.00 36.71 3.50
975 1024 4.142600 GGCAGACATAAGTGCTGTAAAAGG 60.143 45.833 0.00 0.00 39.76 3.11
979 1030 3.981071 AGGCAGACATAAGTGCTGTAA 57.019 42.857 0.00 0.00 39.76 2.41
985 1036 4.100035 TGACTCCATAGGCAGACATAAGTG 59.900 45.833 0.00 0.00 35.10 3.16
1170 1221 3.033909 GGCTGCCTCCTTTATTCCATTT 58.966 45.455 12.43 0.00 0.00 2.32
1186 1237 0.458669 CCATGAAAGATGGTGGCTGC 59.541 55.000 0.00 0.00 34.56 5.25
1404 1736 1.080366 TGCAGTGGGTACTTACGCG 60.080 57.895 3.53 3.53 41.48 6.01
1423 1767 4.853196 CACAAAATACAGCTGAATTCCACG 59.147 41.667 23.35 4.06 0.00 4.94
1424 1768 5.772521 ACACAAAATACAGCTGAATTCCAC 58.227 37.500 23.35 0.00 0.00 4.02
1427 1771 9.586150 CGATATACACAAAATACAGCTGAATTC 57.414 33.333 23.35 0.00 0.00 2.17
1523 1892 0.676736 GGATTCCTCCCACTCTAGCG 59.323 60.000 0.00 0.00 35.28 4.26
1542 1915 1.190984 CCGATTCATCTCGATTGTGCG 59.809 52.381 0.00 0.00 41.12 5.34
1580 1953 5.441718 TCAGCCTGAAGTCCAGATTAAAT 57.558 39.130 0.00 0.00 45.78 1.40
1692 2067 7.307493 TCAAATCTTTAGATCCATTGACACG 57.693 36.000 0.00 0.00 32.75 4.49
1730 2111 2.170985 CAAAACTCGTCGGCGCTG 59.829 61.111 10.86 10.86 38.14 5.18
1775 2165 1.153005 GCATCCTTGGAGAGCCTGG 60.153 63.158 5.82 0.00 34.31 4.45
1877 2267 8.024865 TCAGAACAACTTAATGCAATCTGAATG 58.975 33.333 0.00 0.00 36.11 2.67
1903 2293 5.396436 CGAATCCCTACTAATCAAACACCCT 60.396 44.000 0.00 0.00 0.00 4.34
1942 2388 6.416750 GGTTTGCAAGAATTACAGTGTTACAC 59.583 38.462 7.50 7.50 34.10 2.90
2016 2462 7.229306 GCATTGGAATCACAGGACTGAATAATA 59.771 37.037 6.29 0.00 0.00 0.98
2051 2537 1.264749 ACTTGGCAGCAGATCCGGTA 61.265 55.000 0.00 0.00 0.00 4.02
2062 2548 1.298859 GCCGACAGGTTACTTGGCAG 61.299 60.000 0.38 0.00 42.03 4.85
2119 2606 2.135139 GATGCACAGAGAACGAACACA 58.865 47.619 0.00 0.00 0.00 3.72
2120 2607 2.408050 AGATGCACAGAGAACGAACAC 58.592 47.619 0.00 0.00 0.00 3.32
2126 2613 4.934001 TGAATCAGAAGATGCACAGAGAAC 59.066 41.667 0.00 0.00 34.77 3.01
2149 2636 3.055819 ACATCCTGTTATGCGACTCAACT 60.056 43.478 0.00 0.00 0.00 3.16
2244 2732 2.264794 GCGATGTCCCTCGTGGTT 59.735 61.111 2.33 0.00 40.73 3.67
2247 2735 3.350909 TTCGGCGATGTCCCTCGTG 62.351 63.158 11.76 0.00 40.73 4.35
2253 2741 1.089481 TTCATGCTTCGGCGATGTCC 61.089 55.000 21.59 8.66 45.37 4.02
2263 2751 4.504097 GTGTTGGTTCTGTTTTCATGCTTC 59.496 41.667 0.00 0.00 0.00 3.86
2279 2767 0.179004 TTTGCATCCGAGGTGTTGGT 60.179 50.000 0.00 0.00 0.00 3.67
2285 2773 2.749621 GACTTGAATTTGCATCCGAGGT 59.250 45.455 0.00 0.00 0.00 3.85
2290 2778 8.814235 CAAATATTCTGACTTGAATTTGCATCC 58.186 33.333 0.00 0.00 37.73 3.51
2302 2790 8.043113 TGCTACATCACTCAAATATTCTGACTT 58.957 33.333 0.00 0.00 0.00 3.01
2332 2820 7.375280 GTCATTTCATAGCATCTGTTTCGAATG 59.625 37.037 0.00 0.00 0.00 2.67
2363 2851 1.103398 GTGTTGAAGCTGCTGGTGGT 61.103 55.000 1.35 0.00 0.00 4.16
2369 2857 2.116125 GGGGGTGTTGAAGCTGCT 59.884 61.111 0.00 0.00 0.00 4.24
2488 2994 3.780294 AGGACTGCCCAGATAACACATAA 59.220 43.478 1.69 0.00 37.41 1.90
2560 3066 6.145535 GTGACTAGAATTGTGGCTTTCTTTG 58.854 40.000 0.00 0.00 34.22 2.77
2638 3144 2.623878 TCCTTTCCTTGCACGTACAA 57.376 45.000 0.45 0.45 0.00 2.41
2675 3193 4.471386 TCCATAGGAAAAGTGGAGGAGAAG 59.529 45.833 0.00 0.00 37.12 2.85
2678 3197 4.410228 TGATCCATAGGAAAAGTGGAGGAG 59.590 45.833 0.00 0.00 44.59 3.69
2689 3208 7.004086 ACAAGTTGTTCTTTGATCCATAGGAA 58.996 34.615 1.64 0.00 32.29 3.36
2697 3216 5.296780 TCTGGTGACAAGTTGTTCTTTGATC 59.703 40.000 10.45 0.00 42.06 2.92



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.